KEGG   Rosa chinensis (China rose): 112172678
Entry
112172678         CDS       T06020                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112172678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112172678
Enzymes [BR:rcn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     112172678
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  HECT type E3
   112172678
SSDB
Motif
Pfam: HECT Arm HEAT_EZ TFIIA
Other DBs
NCBI-GeneID: 112172678
NCBI-ProteinID: XP_024165885
Position
6:complement(7192528..7202943)
AA seq 1903 aa
METRSRKRAEATSSAPSSSTSSGRTTRSTKRSRLSSSSLSSSVNPSPISTRSRASRANNQ
DTAAFAVAASATTAMDSTNESSGSRGRRSRNSDKDDKGKEKEHEVRVRDRERERERERER
ERVLDRETERNLGLNMDGGGNGDDDDNDNDSEGGVGILHQNLTSASSALQGLLRKIGAGL
DDLLPSSAMGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFS
VDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEY
MDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSD
AADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAESFASLPDKLDELCNHGLVAQSASL
ISTSNSGGGQSSLSTPTYTGLIRLLSTCASGSPLGAKTLLSLGISGILKDVLSGSGSSSN
TTVSPALSRPAEQIFEIVNLANELLPPLPQGTISMPSSFNLFMKGPIVKKSSGSSSGKPE
DTSGSTPEVSAREKLLNEQPGLLQQFGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYF
SPAEMIESLLSMTNIASFLAGVLAWKDPHVLVPALQIAEILMEKLPKTFSKVFVREGVVH
AVDQLILAGTPNSVTSQVSSAEKDNDCVPGSSRSRRYRRRNSNSNPDGNSLEESKIPASV
TVGSPPSSVEIPTVNSSLRVAVSTCAKAFKDKYFPSDPGAGEVGVTDDLLHLKNLCVRLN
AGVDDPKTKAKGKSKASGSRLVDSSANKEEYLIGVVAEMVAELSKGDGVSTFEFIGSGVV
AALLNYFSCGHFSKERISEANLPKLRQQALKRFKSFVAVALPFSIDEGRVAPMTIIVQKL
QGALSSLERFPVVLSHSSRSSTGSARLSSGLSALSQPFKLRLCRAQGEKALRDYSSNVVL
IDPLASLAAVEEFLWPRIQRSDSGQKAAASAGNSESGNTPTGAGASSLSTSNPASTNRRH
STRSRTSVNIGDAAKREPSQEKSTSSSKGKGKAVLKPSQEEARGPQTRNAARRRAALDKD
VQMKPVNGDTTSEEEELDVSPAEIDDALVIEDDDISDEEDDDQDDVLRDDSLPVCTPDKV
HDVKLGDSAEDTTVASATSDSQTNPASGSSSRAAAVRGSDSVEHRSSNSYGSKGAMSFAA
AAMAGLGSGSRGIRGGRDRQGRPLFGGSSDPPKLTFTSGGKQLNRHLTIYQAIQRQLVLD
EDDDERYAGSDLMSSDGSRLWSDIYTITYQRADSQAERASVGGASSTPPSKSSKSGSSNS
NSDSQLHRMSLLDSILQGELPCDLEKSNPTYNILALLRVLEGLNQLAPRLRTQIVSDSFA
EGKISNLDDLSTTGARVVSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFL
FPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSNEREVRVGRLQRQKVRVSRNRILDS
AAKVMEMYSSQKSVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVRLGMWRSNSSLEKAPM
DIDGDDQKDEKSNVDIVQAPLGLFPRPWPPNAASSDGNQFSKVIEYFRLVGRVMAKALQD
GRLLDLPLSTAFYKLLLGQELDLHDVLSFDAELGKTLQELHNLVSRKLYLESNGDNRDAI
AELRFRGASIDDLCLDFTLPGYPEYVLKPGDENVDINNLEEYISLVVDATVKTGIMRQTE
AFRAGFNQVFDISSLQIFTPHELDYLLCGRRELWETETLADHIKFDHGYTAKSPAILNLL
EIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTANNAAANGTGASELA
DDDLPSVMTCANYLKLPPYSTKDIMYKKLLYAINEGQGSFDLS
NT seq 5712 nt   +upstreamnt  +downstreamnt
atggaaactcggagccggaagcgggcggaggccacctcatcagccccttcatcatcaact
tcgtctggtcgcaccactcgttccaccaagcgctctcgtctctcctcctcttcgctttct
tcttctgttaacccctcaccaatctccactcgctctcgggcctctagggccaacaatcaa
gacaccgccgccttcgccgttgcagcatcggccaccaccgcgatggactccaccaatgaa
tcgtccggctcgcgcggccgccgcagtaggaattccgataaggatgataaggggaaggag
aaggagcacgaggttagagtcagggatagggagagagagagggagagggagagagagaga
gagagggtgttggatagagaaacggagaggaacctggggttgaacatggacggcggagga
aatggtgacgacgatgataatgataatgatagcgaaggtggggttgggattttgcatcag
aatttgacttcggctagtagtgcccttcaggggcttcttaggaagatcggcgccggattg
gatgacctgcttccatcttcggcgatgggctctgcttcgtcatcccaccagagcggaagg
ctgaagaagattctgtctgggttgcgagctgatggagaagaaggaaagcaggtggaggct
ttgacgcagctgtgtgaaatgctttcgattggtactgaggaatcgctcagtactttttca
gtggattcatttgtgcctgtgcttgtggggttgcttaatcatgagagcaatcctgatatt
atgcttctcgcagccagagcacttactcatctttgtgatgtgcttccgtcatcatgcgct
gcagttgtgcattatggtgccgtttctatcttctgtgcaaggttgttgaccatagagtac
atggacttggctgaacagtcactgcaagctctgaagaaaatatctcaggaacacccaact
gcctgtctacgagctggtgctcttatggcagtgctttcttatctggatttcttttccaca
ggagtccagcgtgtggcattatcaactgctgcgaatatgtgcaagaaacttccttcagat
gcagctgactttgtgatggaagctgtcccattactgactaatcttctgcaatatcatgat
gctaaggttttggagcatgcttctgtatgtctgactcgaattgctgaatcatttgcatca
ttgcctgacaaacttgatgaactatgcaaccatggactagttgctcaatctgcatccctt
atttctaccagcaattctggaggtggtcagtcatctctcagtacacctacttatacgggc
ttaatccggctactttcaacctgcgcaagtggttctccattaggagctaaaactttgctt
tctctagggataagtggcattctcaaagatgtactttcgggttcaggcagttcttccaac
actacagtttctcctgctctaagcagaccagcagaacagatttttgagattgtcaatctt
gcaaatgagctgcttcctccacttccacaaggaaccatctccatgccgtccagtttcaat
ttgtttatgaaaggacctattgtgaaaaagtcatctggtagtagttctgggaagccagaa
gataccagtggaagcactcctgaggtttcagctcgtgagaaattattgaacgaacagcct
ggtcttcttcagcaatttggaatggatctccttcctgttttaatacagatttatggctct
agtgtaaatggccctgttcgccacaaatgtctatcggtcatcgggaagttaatgtacttc
agccctgcagagatgattgagtctttgttaagtatgacaaatattgcaagtttcttagcc
ggtgttttagcatggaaagatccgcatgtcttggttcctgctctccaaattgccgagata
ctcatggagaagcttcccaagactttctccaaggtgtttgtcagagaaggtgtggttcat
gctgttgaccaacttattttagctggtactccgaattcagttacttcacaagtctcttct
gctgaaaaggacaatgattgtgtgccgggatcatcacgttctaggcgttatagacgtcgc
aacagtaactcaaatccagatggaaattcattggaagaatcgaagattcctgcttcggta
accgttggttcgcctccaagttcagtggagattccaactgtcaactccagccttcgtgta
gctgtgagtacatgtgcaaaagcgtttaaggacaagtacttcccttcagaccctggggcg
ggtgaagttggtgtcactgatgatctattacatttaaaaaatctgtgtgtgaggttgaat
gctggtgtggatgacccaaaaacaaaagcaaagggaaaatcaaaagcttctgggtctcgc
ttagttgatagttctgcaaataaggaagagtatttgattggtgtcgtagccgagatggta
gccgaactaagcaaaggggatggtgtgtctacctttgagttcataggtagtggtgttgtc
gcagctttgctgaactatttttcttgtggtcacttctcaaaggagagaatttcagaagct
aatttgcccaagcttcgtcaacaagccctcaagaggtttaagtcgtttgttgctgttgct
cttcctttcagtattgatgaaggaagagtagccccaatgactatcatagttcagaaacta
caaggtgctttgtcctctttagagcggttccctgttgtgctgagtcattcatctaggtca
tctactggaagtgcacgcctctcctctggacttagtgcattatcccagccctttaagttg
cgtctatgtcgagcacaaggagaaaaggctctccgagattattcatcgaatgttgtactg
attgacccattagcaagcttagctgctgttgaagagtttctttggcctcgaattcagcga
agtgattctggtcagaaggctgctgcatctgctggaaattctgaatctggaaatactcct
acaggagctggtgcttcatctctgtctacttcaaatcctgcttctaccaatcgtcgccat
tcaactcgttccagaacatctgtaaatataggcgatgctgctaagagggaaccttcacaa
gagaagagcacgagctcatctaaaggaaagggtaaagcggttttgaaaccttctcaggag
gaagcaagaggccctcaaacaaggaacgcagctcgcagaagagcagctcttgataaagat
gttcaaatgaaacctgtgaatggggacacaacttctgaggaagaggaattggatgtatct
cctgctgagatcgatgatgcattggttattgaagatgatgatatctcagatgaagaagat
gatgaccaggatgatgttctcagagatgactctcttcctgtttgcacgccagacaaagta
catgatgtgaaattgggagactctgctgaggatactactgtagcttctgcaacaagtgac
agccagactaaccctgcttctggatctagtagcagagctgctgcagttagaggatcagat
tctgttgaacacaggagtagtaattcttatggttctaaaggtgcaatgtcgtttgctgct
gcagcaatggctgggcttgggtcgggtagccgcggtatcaggggaggtagagaccgacaa
ggacgccctctttttggtggttcgagtgatcctcccaagttgacctttacatctggggga
aagcagctgaatcggcatttgactatctatcaggccattcagagacagctagtgttggat
gaggatgatgatgagagatatgctggcagtgatctaatgtcaagtgatggtagcaggctg
tggagtgatatttacactatcacctaccagagggcagacagtcaagctgagagggcatct
gttggaggggcaagttcaacgcctccgtcgaaatctagcaaatcaggttcttccaattct
aattccgattcccaactgcatcggatgtcacttcttgatagcattttgcagggagaactt
ccttgtgatttggaaaaatctaatcctacatataatatactggcactactgcgagtactg
gagggcttgaatcagctcgcaccccgtttgagaactcagatagtttctgacagttttgct
gaggggaaaatctcaaatttggatgacttgagtacaactggtgctagggttgtttctgag
gaatttattaacagcaaactcactcccaaattagcccgacaaatacaagatgctcttgca
ttgtgcagtggcagtcttccttcgtggtgctatcagttgacgaaagcatgcccctttttg
tttccttttgagactcgaagacagtatttctactcgaccgcttttggattatctcgtgca
ctgtatcgtcttcagcagcagcagggtgctgatggtcatggatcaaacgaacgagaggtg
agagttggaagattgcaacgtcaaaaagtccgtgtctctcgtaaccggattttggactcc
gctgcaaaagtaatggagatgtattcgagccagaagtctgtacttgaagtagaatatttt
ggtgaggtgggcactgggttgggtcctacacttgagttctatacacttctaagtcatgac
ttacagaaagttagacttggtatgtggaggtcaaattcttcattggagaaagcaccaatg
gatattgatggagatgatcagaaagatgagaaaagcaatgttgacattgtccaagctcct
cttgggttgtttcctcgtccctggcctccgaatgctgcttcttctgatggtaaccaattt
tctaaagttattgagtatttccggttggtcgggcgtgtaatggcgaaggctcttcaagat
gggaggctattagacttaccactatcaacagcattttataaactattgcttggccaagag
cttgatttacatgatgttctttcctttgatgccgagcttgggaagactttgcaagaatta
cataaccttgttagccggaaactatatctagaatcaaatggtgacaatcgcgatgcaatt
gctgaattgcgttttcgtggggcttcaattgatgatctctgcttagattttacgcttcct
ggttatccggagtacgtgttgaaacccggagatgaaaatgttgatatcaataacttggaa
gaatatatatctttagtcgttgatgcaacagttaagactggaataatgcggcagacagaa
gcatttagagcggggttcaatcaggtgtttgatatatcatctttacaaatattcacccca
catgaattggactatctgctttgtggccgtagagagctgtgggagaccgagactcttgct
gatcacataaagtttgatcatggatacactgcgaagagccctgcaatactcaatttgctt
gagatcatgggtgagttcacgcctgagcagcagcgtgccttttgccagtttgttactggt
gcacctaggcttccccctggtggtttggcagtgctgaatccaaagctgactattgtgaga
aagcattcttcaactgcaaataatgcagcagccaatgggactggggcttcagaattggca
gatgatgatctgccaagtgttatgacatgcgctaattacctaaagcttcctccttactct
accaaggatattatgtacaagaaactactctatgcaatcaatgaagggcagggatccttt
gatttgtcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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