KEGG   Rosa chinensis (China rose): 112174014
Entry
112174014         CDS       T06020                                 
Name
(RefSeq) probable pectate lyase 20
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn00040  Pentose and glucuronate interconversions
rcn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    112174014
Enzymes [BR:rcn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     112174014
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 112174014
NCBI-ProteinID: XP_024167466
Position
6:48617274..48621496
AA seq 448 aa
MRLASSKATMRFYMTPLLLLLALLVSVAASIENDKPLQSRSVGLEEPKSSINSSMSTERS
NDDWNEHAVDNPEEIASLVDTTIRNSTARRNLGFFSCATGNPIDDCWRCDPQWQRHRKRL
ANCGIGFGRNAVGGRDGRYYVVNDPGHDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITL
KQELIMNSFKTIDARGVNVHIAYGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPSHY
GWRTMADGDGISIFGASHIWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLG
HSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTIN
SQGNRYLAPTNRFAKEVTHRVETTGRWRHWNWRSEGDLLLNGAFFVQSGAGAAASYARAS
SLGAKSSSMIGSITAGAGVLNCRSGRQC
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagattagctagctcgaaagccacaatgcggttctatatgactccactgctgcttctt
ttggccttgctcgtaagcgtagcggcttcaatagagaatgacaagcctttacagtcaagg
tccgtgggactagaggagccaaaaagctccatcaactcgtcaatgtcgacagaaaggtcc
aacgatgactggaatgagcacgcagtagataatccggaggagatcgcgtccttggttgat
acgaccattcgtaacagtactgcgagaagaaacttgggatttttctcatgcgcaacaggg
aatcccattgatgactgctggagatgtgacccacaatggcagcgccaccgcaagaggcta
gccaattgcggcattgggttcgggcgcaatgccgtaggcggccgtgacggaaggtattac
gttgtaaatgaccccggtcatgatgatccggtgaaccccaggcccggtaccctccgtcac
gctgtcatccaggacaggcctttgtggattgtgttcaagcgtgatatggtgatcacattg
aagcaggagcttataatgaacagcttcaagaccattgacgctcgtggagtcaatgtccac
attgcttatggaggttgcattactattcaatacgttactaatgtgatcatccatggtcta
catatccatgactgcaagcctaccggcaatgccatggtccggagctcaccgagtcattat
gggtggaggaccatggctgatggggatggtatatccattttcggagccagccacatttgg
gtcgaccacaactcgctctcgaattgcgccgatggcctcattgatgctatcatgggttct
actgccattaccatttctaacaactacttcactcaccataatgaggttatgttgttgggg
cacagtgattcctacacaagggacaagcaaatgcaagtgaccattgcctacaatcatttt
ggtgagggactcatccaaagaatgccaagatgtagacatgggtatttccatgtggtgaac
aatgactacactcactgggaaatgtatgccattggtggaagtgctgatcccaccattaac
agccagggcaacagatatctcgcccctaccaaccgttttgccaaagaggtgacacataga
gttgagaccacaggcagatggaggcactggaactggagatcagaaggagacctactcctt
aatggagcgtttttcgtccaatccggagctggtgctgcagccagttatgccagagcttca
agcttaggggcaaagtcatcttccatgattggcagcattactgctggtgctggtgttctt
aattgccggtctggtcgtcaatgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system