KEGG   Rosa chinensis (China rose): 112174295
Entry
112174295         CDS       T06020                                 
Name
(RefSeq) small RNA degrading nuclease 5 isoform X2
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112174295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rcn03009]
    112174295
Ribosome biogenesis [BR:rcn03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112174295
SSDB
Motif
Pfam: RNase_T Phosphodiest
Other DBs
NCBI-GeneID: 112174295
NCBI-ProteinID: XP_024167805
Position
6:40078636..40086437
AA seq 570 aa
MPSSHSKCEEEVLATEEDDSNRDQSNGKSSNFYDVYGPQAKAGVEFKTPEATSTLNFEEV
QQLVTWVLADGFMPSWVFVKNKPLIPKVVMLYVPGLDAALYLSQHRLLKGLEKCCGKPRP
VLALSYLSHENQTIDALLTCKLKRKREESDPARTKSNLETQQDDPSSVELLKDLPFPVTF
YTLTTKQLEDNGYVFNQPGFLSTLPAPSGSSHYEMLALDCEMCVTEEGFELTRATLVTIK
GEVVLDKLVKPTNAIKDYNTRFSGITPEMLDGVTTSLKDIQEDFLKLVYKETVLVGHSLE
NDLLALKIAHNLVIDTAVLYKHPGQRSYKSALRVLAKRYLSKEIQQSGNGHDSTEDARAA
MELALLKIRHGPDFGTAPSVFRKKLLKVLSDNGKTTSIIDDVTIVKRYASESSHAFPVAS
DEEALSKAVKEARNEKVQFVWTQFSELYRFLKNQAEDAEKLDVRLAQMISLLTCHKKSGD
KKGIRWSLTSELKEILIRVDTRIRALYAALPTNAMLIICTGHGDIATVDRLNKMLSEREE
TTMCRDSIVKVLAELKAQAEVALCFVGVKS
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgccttcgtcccacagtaaatgcgaagaagaagttttagctaccgaggaagacgactca
aacagagaccagagcaatggcaaaagctcgaatttctatgacgtttatgggcctcaagct
aaagcaggtgtggaatttaagactccagaagctacttcaactctgaatttcgaagaggta
caacaactagtgacgtgggtgcttgctgatggattcatgccgtcgtgggtttttgtaaag
aacaagcccctcattcccaaagtggttatgctttatgttccaggcctagatgcagctcta
tacttatcacagcatcgactacttaagggtctcgaaaaatgttgtggaaaaccgaggcct
gttttagcactcagctatctgtcacatgaaaatcagacgattgatgcgctcctaacatgc
aaactgaaaagaaagagggaagagagtgatccagctaggacaaaatctaacctggaaact
caacaagatgatccatcctctgtggaacttctgaaagatctaccgttcccagttacattt
tacactcttacaacaaaacaactggaagacaatggatatgtcttcaatcaaccaggtttt
ctttctactcttcctgctccttctggatcatctcattatgaaatgttagcacttgattgt
gagatgtgtgtcacagaagagggttttgagctaacgagagcgacgcttgtgactataaaa
ggagaggttgtgcttgataaattggttaaaccaacaaatgctatcaaagattataacacc
aggtttagtggaatcacacctgagatgttagatggggtgactacaagcctcaaagatatt
caggaggacttcttaaagctggtttacaaagagaccgtcctagttggccattcgttggag
aatgacttattagcattgaaaattgctcacaatctcgtgattgatacagcagtattgtac
aagcaccccggtcaacgatcttacaaatctgctcttagagttcttgccaagagatatctt
tctaaagagatccagcagtcagggaatggtcatgacagtactgaagatgcaagagctgct
atggaactggcgcttttaaagattagacatggacctgactttggcacagcaccatcagtt
ttccggaaaaagctgctaaaagttttgagcgataatggaaagaccacctctatcattgat
gatgttaccattgtgaagcgctatgcctctgaatcatcccatgcatttcctgtggcctct
gatgaggaagctctatctaaagctgtaaaggaggcaaggaacgagaaagtgcagtttgtc
tggacgcaattctcagaattatatcgctttttaaagaatcaagcagaggatgctgagaaa
ttagatgtaagacttgctcagatgataagcttgcttacatgccataaaaagtctggagac
aaaaagggtattagatggagtttgacgtctgaactaaaggaaattcttatccgcgtggac
actagaatacgtgctctctatgctgcactacccactaatgccatgcttatcatttgtacc
ggtcatggagatatagcaactgtagatagattaaacaaaatgctttcggagcgtgaggaa
accacaatgtgtcgggatagcattgtaaaggtcttagcggagctcaaggcccaagctgag
gtagctttatgttttgtgggtgtgaagagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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