KEGG   Rosa chinensis (China rose): 112179375
Entry
112179375         CDS       T06020                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03420  Nucleotide excision repair
rcn04120  Ubiquitin mediated proteolysis
rcn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112179375
   04120 Ubiquitin mediated proteolysis
    112179375
  09124 Replication and repair
   03420 Nucleotide excision repair
    112179375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112179375
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112179375
Enzymes [BR:rcn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     112179375
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   112179375
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     112179375
   Cul2 complex
     112179375
   Cul3 complex
     112179375
   Cul4 complex
     112179375
   Cul7 complex
     112179375
   Cul8 complex
     112179375
   Cul9 complex
     112179375
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112179375
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112179375
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 112179375
NCBI-ProteinID: XP_024173543
Position
1:45049398..45051295
AA seq 117 aa
MATLDSDVPMIPVGEGSSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcgacattggactccgacgtgccgatgatcccggtaggtgagggctccagctctgca
ggtccttcctcgaccaagaggcccaagcgatttgagatcaagaagtggaacgccgtcgct
ctctgggcctgggatattgttgtggataattgcgccatttgcaggaaccatattatggac
ctctgcatcgagtgccaagcgaaccaggcaagtgctacaagtgaggagtgtaccgttgct
tggggggtttgtaaccatgccttccacttccactgcataagcagatggctcaagactcgt
caagtgtgtcccttggataacagcgagtgggagttccagaagtatggtcactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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