KEGG   Rosa chinensis (China rose): 112180386
Entry
112180386         CDS       T06020                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03020  RNA polymerase
rcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112180386
  09124 Replication and repair
   03420 Nucleotide excision repair
    112180386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112180386
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112180386
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112180386
  RNA polymerase III system
   RNA polymerase III
     112180386
  RNA polymerase I system
   RNA polymerase I
     112180386
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112180386
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DNA_pol3_alpha Mrr_cat
Other DBs
NCBI-GeneID: 112180386
NCBI-ProteinID: XP_024174690
Position
7:26359024..26362083
AA seq 206 aa
MALSEDEITRLYRIRRTVLEMLKDRDYLVTEAEINMTKEQFKSTYGENMKREDLDINKEK
RSNSSDQIYVFFPNEAKVGVNTMRDYTKRMQSQNVFRAILVSQTKLTPFANRCISEMSTR
FRMEVFQEEELLVNIREHVLVPAHQVLTNEEKKSLLQRYTVKETQLPRMQVVDPVARHYG
LSRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggctctatcagaagatgaaatcacgaggctttacagaattcgaagaacggtgttggaa
atgctgaaagatcgggattacttagttacagaagctgagatcaacatgacaaaagaacaa
ttcaagagcacatatggagagaacatgaaaagggaagatcttgacatcaataaagaaaag
cggagtaacagctctgatcagatatatgtcttcttccctaatgaggcaaaggttggggta
aatacaatgagggactacaccaagcgcatgcaatcgcagaatgtgttcagagcaatcttg
gtgtctcaaacaaagctgactccttttgcaaatagatgtataagtgagatgtctacaagg
ttccgcatggaggttttccaggaggaagaactgttggtgaatattagagagcatgttcta
gttcctgcgcatcaggtgcttacaaatgaggaaaagaagagtttgctgcagaggtatacc
gtgaaagaaacacagcttcctcggatgcaggtggttgatccagttgcaaggcattacggg
ctttcacgtggacaagttgtgaagataatcaggccaagtgagactgccggaagatacgtc
acctaccgttatgttgtgtaa

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