KEGG   Rosa chinensis (China rose): 112180638
Entry
112180638         CDS       T06020                                 
Name
(RefSeq) cleavage stimulation factor subunit 50 isoform X1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112180638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112180638
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     112180638
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Ge1_WD40 Cytochrom_D1 LisH LisH_TPL
Other DBs
NCBI-GeneID: 112180638
NCBI-ProteinID: XP_024174961
Position
7:complement(4285031..4288868)
AA seq 436 aa
MESSLEQTLQDAKLYRELNSLIVAYLRDNNLHQAASAVASATMTSLNVEIPANKLVQLVA
KGLAVEKDEVIRGVSSLANDLGTLIPSGYGSMPALHTASVDFGAVQETKGSSKSFPKHET
RHLSEHKNIARCARFSPDGKFVATGSSDTSIKLFEVAKVKQMMLPEARDGPVRPVIRTFY
DHLQPINDLDFHPQSPILISGAKDNTIKFFDYSKMTAKRAFRVIQDTHNVRSVAFHPSGE
FLLAGTDHPIPHLYDINTFQCYLSANAPEIDVNGAINQVRYSATGGMYVTASKDGAIRLW
DGVTASCVRSIVGAHGTAEATSANFTKDERFVLSSGKDSTVKLWEVGTGKLVKQYLGATH
TQLRCQAVFNNTEEFVLSMDEPSNEIVIWDALTAEVVARWPSNHIGAFRWLEHSPTEAAF
VSCGTDRSIRFWKEGV
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggagagcagcttagagcagactcttcaagatgccaagctctacagagagctcaattct
ctcattgttgcctatctccgtgacaataatcttcaccaggctgcaagtgctgttgcttca
gcaacaatgacatcactgaatgtcgaaatcccggctaataagcttgttcagctggttgct
aagggccttgcagtggagaaagatgaggtgataaggggggtttcttctcttgctaatgat
ttgggtacactgataccttcgggatatggttcaatgccggctcttcatactgcctcggtt
gattttggtgctgtccaggaaacaaaaggctcgtcaaagagtttcccaaagcatgagaca
cgccatctttcagagcacaagaatattgccagatgtgcaaggtttagtcctgatgggaag
tttgttgcgactggaagttcagacacgtcaataaagctatttgaggtggcaaaagttaag
caaatgatgcttccagaggcaagagatggtcctgtgcgacctgtcatacgtacattctat
gaccacttacaacccataaatgatttggatttccatcctcagagccctattcttatatct
ggagcaaaagataacacaataaagttctttgattattccaaaatgactgcaaagagagca
ttcagagttatccaggatacacacaatgtgcgttcagtagcatttcatccttctggggag
tttcttttagctgggactgatcatccaattccacacttatatgatatcaataccttccag
tgttacctatctgcaaatgccccagaaattgatgttaatggagcaataaatcaggtcagg
tattcagctaccggtggcatgtatgttacagcttctaaagatggtgctattcgcttatgg
gatggtgttactgccagttgtgtacgttccatagttggtgcacatggcacagcagaggca
accagtgcaaattttaccaaggacgaaaggtttgttctctcttctggaaaggattctact
gtgaagctttgggaagttggcactggaaaattggttaaacaatatctaggagctacacat
acacaattaagatgtcaggctgtttttaataatacggaggaatttgtactgtctatggat
gaaccaagcaatgagattgttatctgggatgctctgacagcagaagtagtagcaaggtgg
ccatccaatcatattggtgctttccgctggctcgagcactcaccaactgaagccgcattt
gtttcctgtgggactgacagatcaatacggttctggaaggaaggcgtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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