KEGG   Rosa chinensis (China rose): 112183342
Entry
112183342         CDS       T06020                                 
Name
(RefSeq) uncharacterized protein LOC112183342 isoform X1
Organism
rcn  Rosa chinensis (China rose)
SSDB
Motif
Pfam: RVT_2 Retrotran_gag_2 gag_pre-integrs rve DUF4219 rve_3 Retrotran_gag_3 zf-C2H2_10 zf-CCHC
Other DBs
NCBI-GeneID: 112183342
NCBI-ProteinID: XP_040370257
Position
2:complement(64142793..64154734)
AA seq 1507 aa
MEHQRDRASSSINCPPLFDGEDYSQWKIMMRAFLYSQDENMWNIVEIGWEHPTKAEDSKK
EADVSSTRIPKPRKEWTEEEVRDRNCDFKARNSLFTALSKNERMRISHCDTAKQAWDLLQ
VTYEGNKKVRGQKLQRLVLEFENMSMAEDESIDDFHARLLNVTSQCRSLDDPVEEHRIVK
KFLRSLPPKFQAKQIAIEEAQDLDIYSLDELVGNLKTFEMRLKPNKKDELLKVKESFNKF
SIGSEKVSKMMGIGKAHGNKEGLGYNGESCKPLVFVKSVGGENFSSQAQSTSDNKSATKL
TVRPEPHEAIQSHQKGFSVSSDMHTSVRQPRYTHNSKFFVPTCHYCGKLGHIRPRCNMLR
SVTQNQRKTMGINSHASLQAELKEGLNLIARIAKLASIPVDLETKTKSTWVKKGPKCFSA
KIDNCDIPSEYIDATCLLSSCSSRNEFEYVEATCLVALTALADKKGDVWYVDSGCSRHMT
GEKSWFVSFSSEFTTGSVTFGDGKKAKVMGKGTVNTPGIPNLQNVLFVEGLHANLISVSQ
LTDDYEDVNFNKTRCIVTDNNGKNIMGGLRSKDNCYHVRANKSVEVQTCLKAKTSDDVLE
LWHRRLGHVNFQDLLKLSHKESVRGMPFLSGKPDKMCDGCKVGKQTRASHGAINSSTTTH
PLELMHMDLVGPSQTESMGGKKYILVVVDDLSRFTWVNFLREKSDTFESFKGLCKRITNE
KHSSNLCIVRVRTDNGTEFKNALFANFFLEYGISHEFSAPITPQQNGVVERKNRVLLDMG
RVMLHSAGLTPNLWAEAISTACYTANRAFLRPGTNKTPYELWKGKKPNVSHLRVFGSPCY
IYRDREYLGKFDARSDKGIFLGYSLDSRAYRVYNKRTMSVMESYNVSIDDCAVSNVQVNP
DEDQPSGSRVNVGLNEETDDSSNDPIFDHPPVLRTGFKQVQKDHSTQDVIGNVHEGIQTR
RQVATKVSTDSALACFLTENEVNINIISHCGFVSLIEPKNVKEALNDDEWINAMHDELNQ
FARNDVWYLVPRLSEFNVIGTKWIFRNKSDEHGNVTRNKARLVAQGYKQVEGLDFDETFA
PVARLESVRLLLAIACHLHFTLYQMDVKSAFLNGVLQEEVYVEQPQGFKDPSNPDHVYKL
KRALYGLKQAPRAWYERLSTHLVSKGYIQGSIDKTLFIKRDNKHVMIAQVYVDDIIFGST
SDSYVKEFTNIMESEFEMSMCGELNYFLGLQVRQLKTGMFLCQTKYAENLVKKFGLEYAK
AVTNPMSTSVKLTEDLTGKSVDQTLYRSMIGSLLYLTASRPDISYSVGVCARFQANPKES
HLEAVKRIIRYVSGTATCGVYFTFDSNIEIAGYSDADWGGNLKDRKSTSGGCFFIGNNMV
AWHSKKQNCISLSTAEAEYVAAGSCCTQMLWMKQMLRDYGFSQGKLTILCDNSSAINISK
NPVQHSRTKHIDMRYHFIRDLVERNLLELAFVPTEHQLADLFTKPLDTARFESLRSAIGV
LSSATLP
NT seq 4524 nt   +upstreamnt  +downstreamnt
atggaacatcaacgtgacagagcctctagctccattaattgtccacctttgtttgatgga
gaagattactcacaatggaagattatgatgagggcgtttctctactctcaagatgaaaat
atgtggaatatagtggaaattggttgggaacatccaaccaaggcagaagactccaagaaa
gaagcagatgtgagttctacaagaattcctaagcctagaaaggaatggactgaggaggag
gttcgtgacagaaattgtgatttcaaggcacgaaattcattattcacagctctatccaag
aatgagagaatgagaattagccactgtgacactgccaaacaagcatgggatcttctccaa
gtcacctatgaaggaaataaaaaagttagagggcagaaacttcaacggctagtcttggaa
tttgagaatatgtcaatggctgaagatgaatcaattgacgactttcatgctcggcttctc
aatgtaactagtcaatgtcggagcttggatgatccagttgaggagcaccgaattgtcaag
aagtttcttagatctcttcctccaaaattccaggccaaacaaattgctattgaggaggct
caggatctagatatctactctcttgatgaactggtgggaaatctcaaaacttttgagatg
agactcaaaccgaataaaaaggatgagctacttaaagtcaaggaaagtttcaacaaattc
tctatagggtcagaaaaggtttctaagatgatgggaattggcaaagctcatggtaataaa
gaaggattaggttataatggtgagtcctgcaaacccttggtgtttgtaaaaagtgtggga
ggtgaaaatttctcaagtcaggcacaaagcactagtgacaacaagtctgccaccaaattg
actgtaagaccagaacctcatgaagccattcaatcacatcagaaaggtttttcggtaagt
tctgacatgcacacctctgtgcgtcagcccaggtatactcataactcaaaattttttgtt
cctacttgtcattattgtggaaaattaggacacatacgtcctaggtgcaatatgcttcgt
agtgttactcaaaatcagaggaaaacgatgggtattaactcacatgcctcattgcaagct
gagttgaaagaaggtctgaatctaatcgccaggattgcaaagctggcttcaatccccgtg
gatctggaaacaaagacaaaatcaacttgggtcaagaaaggacccaaatgcttctcagct
aagattgataattgtgacataccttctgaatacattgatgccacgtgtttgctttcctct
tgcagctctagaaatgaatttgaatatgtggaagctacttgtctcgtggccttgactgca
ctcgctgataagaaaggtgatgtctggtatgttgatagtgggtgctcaagacatatgacc
ggtgaaaagagttggtttgtgtctttttcaagcgaattcacaaccggatcagtcacgttt
ggagatgggaaaaaggccaaggtaatgggtaagggaacggtaaatacaccaggtattcct
aatctccaaaatgtcttgtttgttgaagggcttcatgcaaatctcataagtgttagtcaa
ttaaccgatgattatgaggatgtaaattttaataaaacaagatgtattgtaactgataac
aatggcaaaaatattatgggtggtttgcgttcaaaagataattgttatcatgtacgtgct
aataaatctgttgaagtgcagacatgtttgaaagccaagacatcggatgatgttcttgaa
ctttggcataggcgtctggggcatgtaaactttcaagacttgctgaaactctcacacaag
gaaagtgtaagaggtatgccttttctgagtggtaagccagacaagatgtgtgatggttgc
aaggtaggtaagcaaactcgtgcctcacatggagcaattaattcatccactacaactcat
ccattggaacttatgcatatggaccttgttggaccttcacaaaccgaaagcatgggtggt
aagaaatacattttggttgtagttgatgatttatcacgttttacttgggtgaatttcctt
agagagaagagtgatacttttgaaagctttaagggattgtgtaaaagaataacaaatgaa
aaacattcctcaaacttatgcattgttagagttaggactgataatggaactgaatttaag
aatgctttgtttgctaatttttttcttgagtatggaatttcacatgagttttcagctcca
attaccccacaacagaatggtgtagttgagagaaagaacagggtattgctagacatggga
agagtgatgctacactcagctggacttactccaaacctttgggccgaagcgattagcact
gcttgctatactgcaaaccgtgcattcttgagaccaggtactaacaaaactccatatgag
ctatggaaaggtaagaaacccaatgtaagtcatcttcgtgtttttggatctccttgctat
atttatagagatagagaatatcttggtaaatttgatgctaggagcgataaaggcatattt
cttggttattctttggatagtagagcttacagggtgtacaacaagcgaaccatgtctgta
atggaatcctataatgtatctattgatgattgtgctgtgagtaatgttcaggttaatcca
gatgaggatcaaccctcaggaagccgagtaaatgtgggactgaatgaagaaacggatgat
tcctcaaatgatcctatttttgatcatccaccagttctaagaacgggcttcaagcaagtt
caaaaagatcattctactcaggacgtcattgggaacgtacatgaagggattcaaacccgc
agacaagttgcaaccaaggttagtactgattctgctcttgcatgcttcttgactgaaaat
gaagtgaacattaacataatttctcattgtggttttgtgtcacttattgaaccaaagaat
gttaaggaggccttgaatgatgatgaatggataaatgccatgcatgatgaattgaatcaa
tttgctaggaatgatgtgtggtatcttgtgcctaggctcagtgaattcaatgtaataggt
acaaaatggatttttcggaataagagtgatgagcatggtaatgttactaggaacaaagct
agacttgttgcccaaggatataaacaagttgaaggacttgattttgatgaaacttttgct
cctgttgctagacttgaatctgttagacttcttcttgcaattgcttgtcatcttcacttt
acattatatcaaatggatgttaaaagtgcctttctaaatggtgtgttacaagaagaagta
tatgttgaacagcctcaaggattcaaagatcctagcaatcctgatcatgtgtacaaactc
aaaagggccctgtatggattgaaacaggctccaagagcctggtatgagcgtttgtctact
catctagtaagcaaaggatatattcaaggttcaattgataaaactttgtttattaaaaga
gacaacaaacatgtcatgattgcacaagtttatgttgatgatatcatatttggctccact
tctgattcttatgttaaagaattcactaacatcatggaaagtgaatttgagatgagcatg
tgtggagagctaaattactttcttggacttcaagttcgtcaactgaagacaggtatgttc
ctatgtcaaactaaatatgctgagaatcttgttaagaaatttggacttgaatatgccaaa
gctgtgacaaatcctatgagtacaagtgtcaaacttactgaggatctaacaggtaagtct
gttgatcaaactctttacagaagtatgattggtagcctactgtatctcactgctagtaga
cctgacatatcttatagtgtaggagtttgtgctcgttttcaggcaaatcctaaagaatct
catttggaagctgttaagcgtatcataagatatgtctcaggcactgccacttgtggtgtc
tattttacatttgattctaatattgagattgctgggtattctgatgcagattggggagga
aatttgaaggatcgaaaaagcacttctggaggttgctttttcattggaaacaacatggta
gcctggcatagcaaaaagcaaaactgtatatctctctccacagctgaagccgaatatgta
gctgcaggaagctgttgtactcaaatgctttggatgaagcaaatgcttcgagattatggg
ttttctcaaggtaagttgactatcttatgtgataactcaagtgctataaatatttccaag
aatccagtgcaacactcacgcactaagcacattgacatgagatatcattttattcgagat
ttggttgaaaggaatttacttgaattagcatttgttccaactgagcatcaattagctgat
ttattcaccaaacccttggatactgctcgttttgaatcacttagaagcgcaattggtgtt
ctaagttctgcaactctcccctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (16)   
   RefSeq(nuc) (16)   
Protein domain (9)   
   Pfam (9)   
All databases (39)   

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