KEGG   Rosa chinensis (China rose): 112188228
Entry
112188228         CDS       T06020                                 
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112188228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112188228
   03110 Chaperones and folding catalysts [BR:rcn03110]
    112188228
   03029 Mitochondrial biogenesis [BR:rcn03029]
    112188228
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcn04147]
    112188228
Enzymes [BR:rcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     112188228
Messenger RNA biogenesis [BR:rcn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     112188228
Chaperones and folding catalysts [BR:rcn03110]
 Heat shock proteins
  HSP60 / Chaperonin
   112188228
Mitochondrial biogenesis [BR:rcn03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    112188228
Exosome [BR:rcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112188228
  Exosomal proteins of other body fluids (saliva and urine)
   112188228
  Exosomal proteins of breast cancer cells
   112188228
  Exosomal proteins of colorectal cancer cells
   112188228
  Exosomal proteins of bladder cancer cells
   112188228
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 112188228
NCBI-ProteinID: XP_024183079
Position
2:61049861..61055421
AA seq 574 aa
MYRIASKLASSVASSTTKKLIGSRIICNRNYAAKDIIFGVGARASLLQGVSEVAEAVKVT
MGPKGRYVIIEKSGKNPQVTKDGVTVAKSISFQDKYKDVGANLVKQVARATNTAAGDGTT
CATVLTQAILIEGCKSIAAGVNAMDLRSGINMAVDAIVTDLKSKALMISTPEEITQVATI
SANGEREIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMRLGRGYISPYFITNQKT
QTCELEYPLILIHEKRISNMTALVRILELAVNKNRPLLVVAEDVESDPLSMLILNKHHAG
VKVCAIKAPGFGENRKANLEDLAVLTGGEVISEDRGLTLEKVQLETLGTAKKVTVSVDDT
IILNGGGDKKLIEERCEELRTTMEKSTAVFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGILPGGGVALLYATKALKNILTQNEDQRRGVEIIQNALKAP
TFTIVQNAGFDGALVLGKLLEQDDHRMGYDAAKGEYVDMVEAGIIDPLKVVRTSLVDAAS
VSLLLTTTEAAIVDSPTEKKPPSRMPNMEDYGGY
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgtatcgaatagcttccaaattagcttcctccgtcgcttcttccactaccaagaaactg
attggtagtaggattatatgcaataggaattatgcggcgaaagatatcatctttggggtt
ggggctcgcgcctctttgttgcaaggtgtctctgaggttgcagaggctgtcaaagttact
atgggaccaaagggtcgctatgtgattattgagaaaagcggcaagaatccccaggtcaca
aaggacggtgttactgttgcaaagagcattagtttccaggacaagtacaaggatgtgggt
gcgaatctcgtgaaacaggttgccagagcaactaatactgctgccggagatggtacaaca
tgtgcaactgtcttgacccaagcaatactcatagagggttgcaagtccatagctgctggg
gtaaatgcaatggatttgcgcagtggtatcaatatggcagttgatgctattgttactgat
ctgaaaagcaaagcattgatgataagcacaccagaagagattacacaggttgccactatt
tctgccaatggcgaacgagagattggagagttgatagcaagagcaatggagaaagttgga
aaggaaggagtcattacagttgctgatgggaatacattggataatgaattggaagtggtt
gaaggaatgaggcttggcagaggttatatttctccctattttatcactaaccaaaagact
cagacatgtgaattggaatacccactaatcctcattcatgaaaaaagaatttcaaacatg
actgcactcgtgagaatactagagctggccgtaaataaaaatagaccacttcttgttgta
gccgaggatgttgaaagtgatccactttccatgcttatactcaacaagcatcatgctggg
gttaaggtttgtgccatcaaagctcctggttttggagaaaacaggaaggccaatttagaa
gatcttgctgttctcactggcggagaggttatcagtgaagaccgtggtttaaccctcgag
aaagtccaacttgaaacacttggtaccgcaaaaaaggtgactgtatctgttgatgacaca
atcattctaaatggaggtggtgataagaagctgattgaagaaagatgtgaggagttgaga
acaacaatggagaagagtactgctgtgtttgacaaggagaaagcacaggagcggctgtca
aaactatctggtggagttgccgttttcaaggttggaggggctagtgaggcagaggttggg
gagaggaaagatcgggtaacagatgctttgaatgctactagagcagcggtggaagagggt
atcttgccaggtggtggtgttgctctcctgtatgctacaaaagcattgaagaacattcta
acgcaaaatgaagaccaaagaagaggagtagaaataatccagaatgctcttaaggcacct
acattcactatagttcaaaatgctggttttgatggtgctctggttcttggtaaattgctg
gaacaagatgatcacagaatgggttatgatgcagccaaaggtgaatatgttgacatggtc
gaggctggaatcattgatccactgaaagttgttagaacatccttggtagacgcagccagt
gtgtcgttactattgacaacaactgaggcagctatagtggacagtccaacagagaaaaag
cctcccagccggatgccaaatatggaagattatgggggctactaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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