KEGG   Rosa chinensis (China rose): 112192918
Entry
112192918         CDS       T06020                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112192918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112192918
Enzymes [BR:rcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     112192918
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     112192918
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 112192918
NCBI-ProteinID: XP_024188625
Position
1:complement(16503965..16528539)
AA seq 1161 aa
MGVPQDSLADPPKSSKNQRFRNGKQVHHMDIDKELLAAPIKSAKDKFALIPEFLKVRGLV
KQHLDSFNYFVNTGIKKIVRANDRIVSGVDPSIWLRFNNIYIDKPSLTTDGVTTEIAPHT
CRLSDMTYSAPIRVDVEYVEGSHDQKRIVTRKAVEIARMPIMLRSCCCTLYGKTESELAI
LGECPLDPGGYFIIKGNEKVLLIQEQLSKNRIIIDMDKKGNVNASVTSSSETIKSKTVIQ
MEKQKIYLDLNQFSKKIPIMVVMKAMGMTSDQEVVQMVGRDPRYGALLMPSIEECAKEGI
YTKEQALLYLESKVKRSMFDRPSSDNDCKVTAVLRDIFIANVPVCRSNFRPKCIYVAVML
RRIMDAILNKDAMDDKDYVGNKRLELSGQSISLLFEDLFKTMISEVRKTVDNILTKPSRS
SRFDLAQYIRKDSISHGLERTLSTGNFDLKRFRMHRTGMTQVLARLSFIGSLGQMTRTKP
QFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMAHVTTDEEEGPLISLCKC
LGVEDLETLSAEELHSPNSFLVLFNGDILGKHRKPQRFATAMRKLRRAGKIGEFVSVFVN
EKQHCVYIASDGGRVCRPLVIADRGISRVKEYHMQELNAGVRTFNDFLSDGLIEYLDVNE
QNNALIALYEDEATTETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNI
AYNQLRRIDLLYLLVYPQRPLLTTKTIELVGFDKLGAGQNATVAVMSYSGYDIEDAIVMN
KASLDRGFGRCILMKKFVVANQNYNNNTQDRIIRPSKDEVDSGKMQVLDDDGIAAPGEII
RSNDIYVKKQVPIVTRGAIRSGLKDSEYRSAFQKYKGPDGESCVVDKVALFSDTHNNLCV
KVLIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVG
KMIELLGGKAGVSCGKFHYGSAFGEPSGHADKVEAISETLVRMGFSYDGKDFLCSGITGC
PLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVSLTRQPTEGKARNGGLRVGEMERDCLI
AYGASMLLYERLMISSDPFEVQVCRVCGLLGYYNHKMKAGICSSCKNGDNISTMKLPYAC
KLLIQELQSMNIVPRLKLAEA
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgggcgtaccgcaagactccttggcggaccctcctaagagcagcaagaaccaacggttt
cgtaatggcaagcaagttcatcacatggacattgataaggaactcctcgccgccccaatc
aaatccgccaaggacaaattcgcactcattcccgagtttctaaaggtgagagggttggta
aagcagcatttggactcgtttaattactttgtcaacactggaatcaagaaaattgtgcgt
gccaatgatcgcatagtgtccggcgtcgatccaagcatttggctcaggtttaataatatc
tatattgataagccctcactgacaactgatggtgtcactaccgaaatcgctccccataca
tgtcgtttatctgatatgacgtattctgctccaataagagtcgatgtagagtacgttgaa
ggaagtcacgatcaaaagaggatagtgaccaggaaagctgtcgaaattgcaagaatgcct
attatgttacggagttgctgctgtaccttatatggaaaaacggaatccgaacttgcaatt
cttggtgagtgcccacttgatcctggagggtattttatcatcaaagggaatgagaaggtg
cttttgatacaagaacagctttcaaaaaacaggattatcattgacatggataagaaggga
aacgtaaatgcttctgttacaagcagttcagagacaattaaaagcaagactgtaattcag
atggaaaaacagaagatctatttggatcttaatcaattttccaaaaagattccaattatg
gtggtcatgaaggctatgggaatgactagtgatcaagaagttgtacagatggttggaaga
gatcctcgatatggtgccctgctcatgccatctattgaggaatgcgcaaaggaaggtata
tatacaaaagagcaagcactgctgtatctcgaatcaaaggtgaagaggtccatgtttgat
cgtccttcatctgataatgactgtaaagtaacggcagttcttcgagatatatttattgct
aatgttccggtatgccggtccaattttcgtccaaaatgcatatatgttgctgtcatgttg
aggcgcataatggatgcaattttaaacaaggatgcgatggatgacaaggattatgttggg
aacaagcggcttgagctatctgggcaatctatttctcttctgtttgaggatctgttcaag
acaatgatctctgaagttaggaagactgtagacaatatattaacaaagcctagcaggtct
agtcgttttgacttggctcagtacatacgcaaagatagtatttcacatggccttgaaaga
accctttctactggaaactttgatctcaaacggttcaggatgcacaggacaggcatgaca
caggtgctagctaggttatctttcattgggtctctaggccaaatgaccagaacaaaaccg
cagtttgagaagtcacgaaaagtgagtggacctagagccttgcaacctagccagtggggc
atgctttgcccttgtgacactccagaaggtgaagcatgtggactggtaaaaaatttggcc
ctgatggcccatgtaacaaccgatgaagaggagggccctctaatatctctgtgcaaatgc
ttgggtgtggaagatttggaaacactatcggcagaggagcttcactcacccaattctttt
ctggttttattcaatggagacatcctcggaaagcacaggaagccacagcgttttgccact
gcaatgagaaagttgcgtagagctgggaagattggagaatttgttagcgtctttgtcaat
gagaagcagcattgtgtttacattgcttctgatggcggtcgagtttgtcggccactagtt
atcgctgacaggggcatttcaagagtcaaagaatatcacatgcaggagctgaatgctgga
gtccgtacttttaatgactttttaagtgatgggttgatcgagtatcttgatgttaacgag
cagaataatgctttgattgctctatacgaagatgaggcaacaacagaaactactcatata
gaaatagagcctttcaccatcttaggtgttattgctgggctaattccgtatcctcaccac
aatcagtcgcctagaaatacttaccagtgtgcaatggggaagcaagcaatggggaatatc
gcatataaccagcttcgtcggatagacttgctttaccttctggtgtatccccaacgacca
ttattgacaacaaagaccattgagctggtgggctttgataaactcggagctgggcagaat
gcaactgttgctgtgatgagttatagtggctatgacatagaggatgcaatcgtcatgaac
aaggcatctctggatcgtggttttggtcgttgtattcttatgaaaaagtttgttgtcgcc
aatcaaaattataacaataacacacaagacagaataatcaggccaagtaaagatgaagtt
gattctggaaagatgcaggttctcgatgatgatggtattgctgcacctggggaaattatt
agatcaaatgacatctatgtaaagaagcaggtccctattgtcacaaggggggctattaga
tcgggattaaaggatagtgagtatcggtctgcctttcaaaaatataaaggacctgatggg
gagtcttgtgtggtggataaagtagctctcttttctgatacacataataatttatgtgtt
aaagtattgattcgccatactcgtagaccagaggttggtgacaagtttagtagcagacat
gggcagaaaggtgtttgtggtacaattgtccagcaggaagatttcccattttctgaacgt
ggcatttgccctgatttaatcatgaaccctcatggatttccaagccgaatgactgttggc
aagatgattgagcttcttgggggtaaagcaggagtttcatgtggtaagtttcattatggt
agtgcctttggtgaaccaagtggtcatgcagacaaggttgaggctataagtgaaacactt
gtgaggatgggatttagctatgatggcaaagacttcttatgctcaggaatcactggttgc
ccattgcaagcatatattttcatgggaccaatttactaccagaagttaaaacacatggtc
cttgataaaatgcatgcacgtggtagtggtcccagagtcagtctaactagacagcctact
gagggaaaagctcgtaatggaggactacgagtaggagaaatggagcgtgattgtctgatt
gcttatggtgccagtatgttgctgtatgagcgcctaatgatctctagtgatcctttcgaa
gttcaggtttgcagagtgtgtggtttattgggttattacaaccacaagatgaaagcggga
atttgttcctcatgcaaaaatggggataatatttctaccatgaagcttccctatgcttgc
aagctcttgatccaggaactccagtcgatgaacattgttccccgcttaaaactagctgaa
gcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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