KEGG T06020: 112197251

Rosa chinensis (China rose): 112197251

Entry

112197251         CDS       T06020

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

rcn Rosa chinensis (China rose)

Pathway

rcn04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:rcn00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112197251
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112197251
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcn04147]
    112197251
Membrane trafficking [BR:rcn04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    112197251
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    112197251
Exosome [BR:rcn04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112197251

SSDB

Motif

Pfam:

BAR_3 ArfGap Ank_5 Ank PH BAR Ank_2 Ank_3 Ank_4 PH_11 PH_8 BAR_2 PH_20 DUF6760 PH_13 GldM_1st

Other DBs

NCBI-GeneID:

112197251

NCBI-ProteinID:

XP_024193638

Position

4:53910017..53917797

AA seq 832 aa
MHFAKLDDSPMFRKQIQGMEDSAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNFDLHEVKE
ARKRFDKASLLYDQAREKFLSLRKGTRNDVATMVEEELHNARSTFEQARFSLVTALSTVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNER
MQDYKRQVDRESRWSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQISKSSSGSGSQLSGQRNSSELGSGLLSRWLS
SHYHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDW
IEKITGVIASLLSSQAPERFLPASPMGSHRRSASESSSFESSDFDHTAVEELASDRSGLN
NADHRQLRSSQQQRSSLRSEKTIDTLRRVCGNDKCADCGAPEPDWASLNLGVLVCIECSG
VHRNLGVHISKVRSLTLDVKVWEPSVINLFQSLGNAFANSVWEELLQSRSAFQLDLIATG
SHKSDKTQLVFISKPNQTDSISVKEKFIHAKYADKLFVRRPKDGQYTHLVAQQIWEGVRA
NDKKAVYRHIVNSEPDVNAVYEQASCGSSLTLAKVMLMQEQTSHDQSSSCLAGDSLERSS
GSSSNLSGTSEVQAMEDLDGCTLLHLACETADIGMLELLLQYGANVNATDSRGQTPLDRC
ILKGRNTFAKLLLTRGADPRALNGEGKTPLELAVESNFDDGEVLSILSDSRG

NT seq 2499 nt +upstreamnt +downstreamnt
atgcatttcgcaaagctcgatgattctcctatgttccgcaagcagatacagggcatggag
gacagtgccgagtcattgagggagagaagtttaaagttttacaaaggatgtcgaaaatac
actgaaggtcttggggaagcttatgatggggacattgcttttgctagtgccctagaaaca
tttggtggggggcataatgatccaattagtgtcgcttttggaggccctgttatgaccaaa
tttactatcgcattaagagaaattgggacatacaaggaagttcttcgctcccaggttgag
catatgctaaatgacagattgttacaatttgtgaattttgatttgcatgaggtcaaggaa
gcgcgaaaacgttttgacaaggctagccttctttatgaccaggctcgcgaaaaatttctc
tcactgagaaaaggaacaaggaatgatgtagccaccatggtagaggaggagcttcataat
gcaaggtctacatttgagcaagctcgttttagtcttgtgactgctctttctactgttgaa
gcaaaaaagaggtttgagtttctggaagcggtcagtgggacaatggatgcccatcttcgt
tacttcaaacagggttacgagttgttgcatcaaatggaaccctatattaatcaggtcttg
acttatgctcaacagtcaagagaaagatccaactatgaacaggcagctcttaatgaaagg
atgcaagattacaaaagacaggtcgatagagagagtaggtggtcgtccaatggttctaat
gggtctcctaatggagatgggatacaagctattggtagaagttcacataaaatgatagag
gctgttatgcaatctgctgcaaagggaaaggttcaaaccatcaggcaaggttatctctca
aagaggtcctcaaacttgaggggtgactggaaaagaagattttttgttcttgatagccga
ggaatgctctattactatcggaaacaaatcagcaaatcatcatctggctctggtagtcaa
ctttctggtcagaggaatagttctgagcttggttctggactgttgagtcgctggctttct
tctcattatcatggtggagtgcatgatgagaaatctgttgctcatcacacagtgaatctg
cttacatcaacaatcaaagttgacgctgaccagtcggacctaagattttgtttcaggatc
atttcaccaacaaagaactatactttgcaggcagagagtgcacttgatcaaatggattgg
attgaaaagataacgggggttattgcttcattacttagttctcaggctcctgagaggttt
ctgcctgctagtcccatgggaagccatcgtcgttctgccagtgagagtagttcgtttgag
agttctgattttgatcacactgcagttgaagaacttgcatcggacaggagcggcctgaat
aatgctgaccaccgccaattaagaagttcgcaacagcaacggtcttctttaagaagtgag
aagacaattgacactctacgacgagtatgtgggaatgataaatgtgctgattgtggtgcc
cctgagccagattgggcatcattaaatcttggcgttcttgtttgcatcgaatgttctggt
gttcatcgtaaccttggtgttcatatctcaaaggtaaggtctctgacactggatgtcaaa
gtatgggagccttctgtcattaatttgtttcagtcattgggtaatgcctttgcaaactct
gtctgggaggaacttttgcaatcaagaagtgcttttcagcttgatcttatagccacaggg
tcacataaatctgataaaacacagctagtttttatcagcaaacccaatcagactgattca
atatcggtaaaggagaaattcattcatgcaaagtacgcagacaagctttttgtaaggagg
ccaaaggatggacaatatactcatttagtggcacaacagatttgggagggtgttcgtgct
aatgacaagaaagctgtgtatcgtcacattgttaattctgaaccagacgtgaatgcggtg
tatgagcaagcctcgtgtggctcttccttaacccttgcaaaagtaatgctgatgcaagag
cagactagccatgaccaaagctctagctgcttagctggggattcattggagaggtcttct
ggtagctcttcaaacttgagtggtacaagtgaagtccaggctatggaggatctcgacggg
tgcacccttcttcaccttgcttgtgaaactgcagacattggtatgcttgaactgctccta
caatatggagcaaatgtaaatgcgactgattcaagaggtcaaacaccactcgaccgatgt
attctcaagggcagaaacacatttgcaaaattgcttcttacaaggggagcggatccaaga
gcactaaatggggaaggtaaaaccccccttgagctggcagttgagtcgaactttgatgat
ggcgaggtcctttctatattatcagactcccgtggataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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