KEGG   Rosa chinensis (China rose): 112198431Help
Entry
112198431         CDS       T06020                                 

Definition
(RefSeq) probable methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn00450  Selenocompound metabolism
rcn00970  Aminoacyl-tRNA biosynthesis
rcn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    112198431
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    112198431
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rcn01007]
    112198431
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcn03016]
    112198431
Enzymes [BR:rcn01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     112198431
Amino acid related enzymes [BR:rcn01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   112198431
Transfer RNA biogenesis [BR:rcn03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    112198431
 Prokaryotic type
   Other AARSs
    112198431
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: tRNA-synt_1g tRNA_bind tRNA-synt_1 Anticodon_1 Hormone_recep tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID: 112198431
NCBI-ProteinID: XP_024195324
Position
4
AA seq 798 aa AA seqDB search
MGDLAVTSKEGPKLPIPGQRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYN
TVYICGTDEYGTATETKALEEKCSPKEICDKYHAIHRQVYEWFNISFDKFGRTSMPEQTE
VCQAIFNRLLENNWLSENTMQQLYCDTCTRFLADRLVEGTCPTQGCDYTSARGDQCENCG
KLLNPTELKDPKCKVCKSTPRIRDTNHLFLELPLLKDRLEEYINKMSVEGSWSQNAIQAT
NAWLREGLKQRCITRDLKWGVPVPHDNFRDKVFYVWFDAPIGYVSITKCYTPDWEKWWKN
PEDVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGIGV
FGNDARDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVA
KPSGQGYDSIIPDAQDAISDPLTEKIAEKVGKCVEQYVEAMEKVKLKQGLKLAMSISSEG
NAYLQESQFWKLYKEDQPRCSIVMRTAVGLVHLLACLLEPFMPSFSVEVFKQLNLSPETH
ISLCDDKGDTDRARRPWEIVPRGHKIGKPEPLFKELNDDEVDSLRKRFAGSQADRKEREE
AEAVKLAEQLKKSKVSDKSGKKKQQATKSATEAEISISRLDIRVGLITKAQKHPDADALY
VEEIDVGEGQPRTVVSGLVRFIPLEEMQNRKVCVLCNLKPATMRGIKSQAMVLAASNSDH
TTVELVDPPKSAQVGERITFPGFQGEPDDVLNPKKKVWETLQVDLHSNPELVACYKDIPL
TTSAGVCTVKSIRGGSIR
NT seq 2397 nt NT seq  +upstreamnt  +downstreamnt
atgggagaccttgccgttacttccaaggagggccccaagctccccatccccggccaacgc
aacgtcctcatcaccagcgcattgccgtatgtcaacaacgtccctcatctcggcaacatc
atcggctgtgttctcagcgccgatgtcttcgctcgctactgccgtctccggggatacaac
actgtctatatctgcggcaccgatgagtacggcaccgccaccgagaccaaagccctggag
gagaagtgtagccccaaggagatctgcgataagtatcatgcgattcataggcaggtgtac
gagtggttcaatataagttttgacaaattcgggcgaacttcgatgccggagcagacggag
gtgtgccaagcgattttcaataggctgctggagaataattggctttctgagaacacaatg
cagcagctatattgtgatacttgcacacggtttttagccgacaggcttgtggaggggacg
tgcccaactcaaggttgtgattatacttctgcaagaggagatcagtgtgagaactgtggg
aagcttttaaaccccacagaattaaaggatccgaagtgcaaggtctgtaagtcgactcca
cggattcgtgatacaaaccatttgtttctggaactgcctttgctgaaggataggttggaa
gagtatattaataaaatgtcagtggaggggtcttggagccagaatgccattcaagcaaca
aatgcgtggctcagagaggggcttaaacaacggtgtatcactagggatctgaagtggggg
gttccagttccacatgataacttcagggacaaggttttctatgtgtggtttgatgcgcct
attggatatgtttcaattactaaatgctacactccagattgggagaaatggtggaagaat
ccagaggatgtggagttgtatcagtttatgggcaaagataatgtgccattccacacggtg
atgtttccttccacgcttcttggaactggtgaaaattggaccttaatgaagacaattagt
gttactgaatacttgaactatgaagcaggaaagttttccaagagtaaagggattggagta
tttggaaacgatgccagagatacaaacattcctgttgaagtatggcgatattacttgctg
accaataggcccgaggtgtcagatacattatttacatgggcggatttgcaagcgaagctc
aacagtgaattgctgaataatttgggcaacttcattaaccgagttttgagttttgttgcc
aaaccttcaggtcaaggatatgactccattattccagatgctcaagatgccatctctgat
cctttgacagagaaaatagctgaaaaagtgggtaaatgtgtggagcaatatgtggaggcc
atggagaaggtaaaactaaagcaaggactcaaactagcaatgagcatttcaagtgaaggg
aatgcatatctgcaagaaagtcagttctggaagctttacaaggaagatcaacctcgctgc
tccattgttatgagaactgcagtggggctagtgcatcttcttgcttgcttattagaaccc
ttcatgccatctttttctgttgaggtatttaagcagcttaatttgtctcctgagacgcat
atatcactttgtgatgataaaggcgatactgatagggcaagacggccatgggagattgta
cctagaggtcacaagattgggaaaccagagccgttgttcaaggaattgaatgatgatgaa
gtagattctctaaggaagaggtttgctggaagtcaggcggatagaaaggaaagggaagaa
gctgaagcagtgaagttggctgagcagctcaagaaatcaaaagtttcagacaagagtgga
aagaagaaacaacaagccacaaaatctgcaactgaagcagagatttccatatctagacta
gatattcgtgtcggcctcattacaaaagctcagaagcatcctgatgctgatgcactttat
gtggaagagattgatgtcggcgaaggacagcctagaacagttgttagtggactagtcagg
tttatacctcttgaagaaatgcagaatcggaaggtatgcgtcctttgcaacctgaagcca
gcgaccatgcggggtattaaatcacaagcgatggttcttgctgcttcaaatagtgaccac
accacggttgagttggttgatccaccaaaatctgctcaagttggggagagaattacattt
ccggggttccaaggtgagcctgatgatgtgttgaaccccaagaagaaggtttgggaaacc
ctacaggtagatttgcacagtaaccctgagctagtcgcatgctacaaagatattcccctc
actacatcagcaggtgtttgcactgttaaatctattcgaggtgggtcaattaggtag

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