KEGG   Rosa chinensis (China rose): 112201058
Entry
112201058         CDS       T06020                                 
Name
(RefSeq) probable pectate lyase 5
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn00040  Pentose and glucuronate interconversions
rcn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    112201058
Enzymes [BR:rcn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     112201058
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 112201058
NCBI-ProteinID: XP_024197829
Position
4:56465191..56466958
AA seq 402 aa
MAMPLSLLSLLSLLLIPSLISSSPVPNPDSVIQEVHRSINASRRSLGFLSCGSGNPIDDC
WRCDPKWEQNRQRLADCAIGFGKHAIGGRDGKIYVVTDAGDHPVNPKPGTLRYAVIQDEP
LWIIFKGDMTITLKEELMMNSFKTIDGRGANVHIAGGPCITIQYVTNIIIHGLNIHDCKQ
GGNAYVRDSPSHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISN
NYMTHHNKVMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGNFHVVNNDYTHWE
MYAIGGSASPTINSQGNRFLAPNDRFNKEVTKHEEAPQNEWSKWNWRSSGDLLLNGAFFT
ASGAGASSSYAKASSLGARPSSLVSSITAGAGSLKCKKGSRC
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggcaatgccactctctcttctctcactcctctctctcctccttatcccatctctcatt
tcctcctccccggtcccaaaccccgattccgtaatccaagaagtacacaggagcattaat
gcgtctcgaaggagtttgggttttctttcatgcggaagcggaaaccccatcgacgattgc
tggaggtgtgaccccaaatgggagcagaaccggcagagactcgccgactgcgcaattggg
ttcggaaagcacgccattggaggcagagacggcaaaatctacgtcgtcaccgacgccggt
gaccaccctgtcaacccaaaacccgggactctccgctacgccgtcatccaagacgagccg
ttatggatcatcttcaaaggtgacatgaccatcacgctgaaagaggagctgatgatgaac
tcgttcaagaccatcgacggccgaggagccaatgtacacatcgccggcgggccttgcatt
actattcaatacgtcaccaatatcataatccacggcttgaacatccacgactgcaagcaa
ggcgggaatgcttatgttagagactctcctagccattatgggtggaggactttgtctgac
ggagacggggtttcgattttcgggggaagccatgtttgggtggatcattgctctctctcg
aactgccgtgatggtctcattgatgcgattcatggctctacggctattacgatttccaac
aattacatgacgcaccataacaaggtcatgttgttgggtcacagtgacacctacacgcag
gacaagaacatgcaggtcactattgcgttcaatcactttggagaaggccttgttcaaagg
atgccaaggtgcaggcatggaaattttcatgtggtgaacaatgactatacgcattgggaa
atgtatgcaattgggggtagtgcttctccaactatcaacagccaagggaataggtttctt
gcacctaatgatagatttaacaaagaggtgactaaacatgaggaagcaccacagaatgag
tggagcaaatggaactggaggtcttcaggggatttactgctgaatggtgcatttttcaca
gcgtctggtgccggagcttcttcgagttacgccaaggcttcgagtttgggtgcaaggcca
tcttccctagtgagctcaatcacagctggtgctggttcactcaaatgtaagaagggctcg
cgttgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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