KEGG   Rhodobacter capsulatus: RCAP_rcc00078
Entry
RCAP_rcc00078     CDS       T01213                                 
Name
(GenBank) protein of unknown function DUF163
  KO
K00783  23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Organism
rcp  Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rcp03009]
    RCAP_rcc00078
Enzymes [BR:rcp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.177  23S rRNA (pseudouridine1915-N3)-methyltransferase
     RCAP_rcc00078
Ribosome biogenesis [BR:rcp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RCAP_rcc00078
SSDB
Motif
Pfam: SPOUT_MTase
Other DBs
NCBI-ProteinID: ADE83843
UniProt: D5AKK1
Position
complement(87899..88366)
AA seq 155 aa
MKVSICAVGKLRKGPELDLITDYLDRFGKAGRSFGLGPATILEVEDKRNLGMEAEAALLE
RAIPAGSVLVTLDERGDLVSSPDFATRLGGWRDAARDVTFIIGGADGIAPALRAKADWSL
SFGKMVWPHMLVRVMLAEQLYRAGQILAGTPYHRV
NT seq 468 nt   +upstreamnt  +downstreamnt
atgaaggtcagcatctgcgcggtgggcaagctgcgcaagggccccgagctggatctgatc
accgattatctggaccgcttcggcaaggccgggcggtcctttggtcttgggccggccacg
atccttgaggtcgaggacaagcgcaatctgggcatggaggccgaggcggcgcttctggaa
cgtgcgattcccgccggatcggtgctggtgacgctggacgagcggggggatctggtctcc
tcgcccgattttgccacgcggctgggcggctggcgcgatgcggcgcgggatgtgacgttc
atcatcggcggcgccgacgggatcgcgcctgcgctgcgggcgaaggcggactggtcgctc
tccttcggcaagatggtctggccgcatatgctggtgcgggtgatgctggccgagcagctc
taccgcgccgggcagattctggcgggcacgccctatcatcgcgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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