KEGG   Ricinus communis (castor bean): 8259465
Entry
8259465           CDS       T01087                                 
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00040  Pentose and glucuronate interconversions
rcu01100  Metabolic pathways
Module
rcu_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    8259465
Enzymes [BR:rcu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     8259465
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 8259465
NCBI-ProteinID: XP_015572486
Position
3:complement(31919245..31922117)
AA seq 398 aa
MQGFFLATILVFCVATSNLVIADGRRNFNAAEFGAIGDGQTDNSEAFLKAWEAVCTATVR
GTATLEIPAGTFLLNPVKFEGPCKSNKVHLQVLGKIVAPRTIDEWRPRCKSSVWLLFRGI
SGLIVNGPGAIDGRGSNWWKLGQTHGCKRPRALQFHNCNHVKLSGLTHMNSPKVHIGVNG
CKGVSISNLNISAPEDSPNTDGIGISGSTDVHISNSTIGTGDDCIAVNGGCSHINITNVT
CGPGHGISVGSLGDKGCNDKVEDVHVQNCTFIGTQNGVRIKTWPGGSGYAKNISFERIVL
HQTKNPIIIDQHYCNGHKCTEKAVAVELSGIKYSGVEGTSASKQAITFDCAKIGCRNIAM
DQINITSSSPGKQIHAFCNNAKGTSTSTTPLVPCLLSL
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgcagggattcttcctggctacaatcttggtattttgtgtagctacatccaatctagtc
attgctgacggccggaggaactttaatgcggctgaatttggtgccattggcgatggccaa
actgataattccgaagcctttctaaaagcatgggaagctgtatgcaccgctacagttaga
ggcacagcaaccctagaaatacctgcaggcacatttttgctgaatcctgtcaaatttgag
ggtccttgcaagtctaacaaggttcatcttcaggttttaggaaaaatagtagcaccaaga
actattgacgaatggcgccccaggtgtaaaagtagtgtttggttgcttttcagaggaata
agcggtttgattgtaaatggacctggtgcgattgatggtcgaggctcaaattggtggaaa
cttggacagacacatggatgcaagagaccaagggccttgcaatttcacaactgtaatcac
gtcaagttaagtggactcactcatatgaacagccctaaagtacatatcggtgtgaatggc
tgcaaaggtgtctctatctctaatctcaatatttcagctcctgaagacagccctaacact
gatggaattggcatctcaggctcaaccgatgtccacatatccaactccactattgggact
ggtgatgattgtattgctgtcaatggaggctgctcccatatcaacattactaatgttact
tgcggaccaggtcatggaattagtgttggaagcttgggagataaaggttgtaatgacaag
gtagaagatgtgcacgttcagaattgtactttcatcggaacccagaacggcgtcagaatt
aagacatggccgggtggatctggttatgccaaaaatatttcatttgagagaattgtactc
catcaaactaaaaatcctatcataatagaccaacattactgcaatggacacaaatgcacc
gaaaaggcagtggcagtggaattgagtggaataaagtatagtggagtggaaggaacatct
gcaagcaaacaggcaataacatttgattgtgctaaaataggttgcagaaatatagcaatg
gatcaaattaatattacctcttcgtctcctggaaagcagattcatgccttctgtaacaat
gctaagggaacatctacctctactacacctctagtcccctgcctactttcactgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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