KEGG   Ricinus communis (castor bean): 8259777
Entry
8259777           CDS       T01087                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
  KO
K21343  ubiquitin carboxyl-terminal hydrolase 15 [EC:3.4.19.12]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rcu01002]
    8259777
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcu04131]
    8259777
   04121 Ubiquitin system [BR:rcu04121]
    8259777
Enzymes [BR:rcu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     8259777
Peptidases and inhibitors [BR:rcu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   8259777
Membrane trafficking [BR:rcu04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    8259777
Ubiquitin system [BR:rcu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    8259777
SSDB
Motif
Pfam: UCH UCH_1 USP7_C2
Other DBs
NCBI-GeneID: 8259777
NCBI-ProteinID: XP_048236013
Position
10:17482102..17489580
AA seq 935 aa
MSRLLSKKLFVFSLIAKSTIKLTQLSLSTFHLFKSLTLSLFSKTLTSMDDDFFSSAAADD
SNYLDFDTTPSTSYSSRRYFGRPFIDDDDSDVEKLYLVPFRWWKEAKIGGDGQIGVLYDV
AVSGGDVDKEIALDLRKVEEDSRKSDDIVYEEYALLSGTMWLQALKWHNDSKAAVQDVDS
PLLAEDDLEDVFPLQIRLSVSPETNSLIVKISLKENEVAFYRRACNIFFSKNEVLHIWDF
SRQTTQVFMKVKIDLPNCSMGQSAEEVLVELEVYGFPDSIKVRDRKIDEMAENSVTDGSF
STGLVKMNGSSDLMSFCSTPTNSSLSGCSYRRFGYLGLAGLRNLGNTCFMNSAIQCLAHT
AKLVDYFIGDYERDINRENPLGLKGELALAFGNLLRKLWAPGAILVAPRMFKLKLANFAP
QFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYTEAKDTDDHPDNEVADDYWQNHLARND
SIIVDLCQGQYRSTLVCPMCKKKSVTFDPFMYLSLPLPSTTMRTMTLTLLSTDGSTLPSP
ITVTVPKCGRLKDLLDALSSECPLRNDETLLVAEIYRNKIFRFLEEPSDSLALIRDDDKL
VAYRLPKDNEASLLVVFLHELLDKPSGLESAAPNWKLFGIPLVARFSDLCNGSKLRKQYL
KVLNPFLMPADDDILNDYDDLGITANDDSAMADIPSPTVSENNAGSDGETDDDSLFSSEF
QINMTNLGESAEIQMSKPSPIPKFNKRFEVYVSWSKKMIEKYDTCILSSLPEVFKPQLYT
RRPQESVSLYKCLEAFLKEEPLGPEDMWFCPACKKHRQASKKLDLWRLPEILVVHLKRFS
YSRVIKNKLETHVDFPVEDFDLSTYISRKDGQFSYRYELYAISNHYGGMGGGHYTAFVDH
GHGRWYEFDDDNVSPVNEGRIITSAAYVLFYRRIA
NT seq 2808 nt   +upstreamnt  +downstreamnt
atgagccgtcttctctcgaaaaaacttttcgtcttctctctaatcgcaaaatccaccatt
aaactcactcagctctctctctctactttccatcttttcaaatccttaactctctctctc
ttctccaaaaccctaacctctatggacgatgatttcttttcctccgccgccgccgacgac
agcaattaccttgacttcgacaccactccctctacttcctattcttctcgccgttacttt
ggccgtccttttattgatgacgatgatagtgacgttgagaagctttacttagttcctttt
aggtggtggaaagaggccaaaatcggcggtgacggtcaaattggagtgttgtatgatgtg
gcagtgagtggtggggatgttgataaggagattgcgctggacttgcggaaggtagaggaa
gattctagaaagagcgatgatatagtgtacgaggagtatgctttgttgtctgggacaatg
tggttgcaggcacttaaatggcataatgattctaaagcagcagtacaagatgtagatagc
cctttgcttgcagaagatgatttagaagatgtctttcccttacaaatcaggctttcagtt
tctccagaaacaaattcattgattgtgaagatcagtttaaaggaaaatgaggttgctttt
tacaggagagcatgcaatatatttttctccaagaatgaggtgttacatatttgggacttc
tcaaggcaaacgacccaagttttcatgaaggttaaaattgacttgcctaattgttctatg
ggacaatctgctgaagaggttctcgttgaattggaagtctatggatttcctgattccatt
aaagttagagacagaaagatagatgagatggcagaaaatagcgtgacagatggttccttc
agcactggtttggtaaaaatgaatggaagcagtgatttaatgagcttttgttcaacgcca
acaaactcatcactttctggttgtagctatagaagatttggttacttgggtttggcagga
ttacggaaccttgggaatacttgcttcatgaatagcgcaattcagtgtttggcacacact
gcaaagctcgttgattatttcataggagattatgaaagagacataaatcgtgaaaatcca
ctagggttgaaaggtgaacttgctttggcatttggaaacttgctaaggaagctttgggct
ccaggagcaattcttgttgctcctagaatgttcaagctaaaacttgctaattttgctcct
caattcagtggctataaccagcatgattcccaagaatttcttgccttcttgttggatgga
ctccatgaagatttaaatcgtgtgaaatgcaagccttacacagaagctaaagatacagat
gaccatccggacaatgaagtggcagatgattattggcagaatcatctggctcgcaatgac
tcgattatagttgatttatgccaaggtcagtatcgttcaacattggtttgccccatgtgt
aagaagaagtctgttacatttgatccatttatgtacctgtcgctgccattaccttcaaca
acaatgcgaacaatgactttaacgcttttgagcactgatgggagtacattgccttctcct
attactgtaactgttccaaagtgtgggcggttaaaggatctccttgacgccttgagctct
gaatgtccattaagaaatgatgaaactctcttagtggctgagatatacaggaataagatt
ttccgtttccttgaggagccatctgattcattagctttgatcagagatgacgacaagctt
gttgcttatcggttacccaaagataatgaagcatctctattggttgtgtttttgcatgaa
cttttggacaagccttccggattggagagtgcggcaccaaactggaagttgtttggcatt
cctcttgtagcaagattttctgatctttgtaatggatctaaactgcgtaaacagtatctg
aaggtgctcaatccatttctaatgcctgctgatgatgatatattgaatgattatgatgat
ttgggaatcacagctaatgatgattctgcaatggcggatatccctagtcctacagtttca
gagaataatgcaggctcagatggtgaaacagatgacgattcacttttcagttctgaattt
caaatcaacatgacaaatttgggagaatcagcagagatacagatgagtaagccgtcacca
atccctaaatttaacaaaagattcgaggtgtatgtttcctggtctaaaaagatgattgag
aagtatgatacatgcattctgagctccttaccagaggtttttaagccacagttgtataca
aggaggccacaggagtctgtttctttgtataaatgcctagaagcatttttgaaggaagag
cctttaggaccagaagacatgtggttttgtcctgcctgcaaaaagcatcgacaggctagt
aagaagttggatctttggagattgcctgaaatattggttgttcacttaaagaggttctct
tacagtcgagttattaagaacaagctggaaacccatgttgatttcccagtagaggatttt
gatctttcaacttacatttctcgcaaggatggtcagttttcctatcgatatgagctatat
gcaataagtaatcattatggaggcatgggaggcggacactatactgcatttgttgatcat
ggccatggtaggtggtatgagttcgacgacgacaatgtttctcctgttaatgaaggccgg
attatcacatctgcagcttatgtactcttctacagaagaattgcatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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