KEGG   Ricinus communis (castor bean): 8264929Help
Entry
8264929           CDS       T01087                                 

Definition
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00450  Selenocompound metabolism
rcu00970  Aminoacyl-tRNA biosynthesis
rcu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    8264929
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    8264929
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rcu01007]
    8264929
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcu03016]
    8264929
Enzymes [BR:rcu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     8264929
Amino acid related enzymes [BR:rcu01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   8264929
Transfer RNA biogenesis [BR:rcu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    8264929
 Prokaryotic type
   Other AARSs
    8264929
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: tRNA-synt_1g tRNA-synt_1 Anticodon_1 C1_1 CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID: 8264929
NCBI-ProteinID: XP_015575981
Position
Unknown
AA seq 645 aa AA seqDB search
MGDQQEEKNRENQANKRPPKLPIPGKRNVLITSALPYVNNVPHLGNIIGSVLNGDVFARY
CRLRGHNVLYICGTDEYGTATETKAMEENCTPQEICDNIKITCNCNWPLHFLFYMDFLFI
RYHAIHKEVYDWFDISFDEFGRTSTPQQTEICQAIFKKLMENNWLSENIMQQLYCDTCER
FLADRFVEGTCPTLGCDYDSARGDQCEKCGKFLNPTELINPRCKVCQTTPRTRDTNNLFL
ELPLLKDNLQSYISEMSVTGSWSQNAIQTTHAWLRDGLKPRCITRDLKWGVPVPLEKFKD
KVFYVWFDAPIGYISITSCYTPDWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTLIGTR
ENWTLMKNISVTEYLNYESGKFSKSKGVGVFGNDARDAHHPAEVWRYYLLANRPEISDTI
FTWEDFQAKLNNELIHNLGNFIHRVLSFIANTSGKGYGTVIPDAPGAESHPLTIKFAIDV
TNLVDEYVKAMDQVKLKQGLKCAMSISGAGNTYLQASQYFRLYEEDQASCSIVVRTSVGV
VCILARLLEPFMPSFSHKVFKLLKLPPETTFSLSEEDDCLERAKRPWEVIPSGHTIEKLY
PLFMKLTDDEVKGFKAKYAGSGTNKAKQESGSKKLAERLKQTHIC
NT seq 1938 nt NT seq  +upstreamnt  +downstreamnt
atgggagatcaacaagaagaaaaaaaccgagaaaaccaagcaaacaaaagaccaccaaag
ctgccaattccaggcaaaagaaacgtactgattacaagtgccttgccctatgttaataat
gtacctcaccttggtaacattattggcagtgttttaaatggtgatgtgtttgctcgttat
tgtcgtcttcgtggccataacgtcttatacatatgtggaactgatgagtatggtacagcc
actgagactaaggctatggaagaaaattgtactcctcaggagatatgtgataacataaag
atcacatgcaattgcaattggccgcttcacttcctattttacatggatttcttgtttatt
agatatcatgcaattcataaagaggtctatgattggtttgatataagtttcgatgaattt
gggcgaacatcgactcctcagcaaactgagatttgccaagctattttcaagaagctgatg
gagaacaattggctctcagagaacataatgcaacagctttactgcgatacatgtgaacgt
ttcttagcagaccggtttgtggaaggaacctgcccaacactcggctgtgactatgattcc
gcacgtggggatcaatgtgagaaatgtgggaagtttttgaatccaacggaacttataaat
cctagatgcaaggtgtgtcagacaactccaagaacccgtgacactaacaatttgtttcta
gagctgccgttgttgaaggataacttgcaaagctatatttctgagatgtcagttacagga
tcttggagccaaaatgctattcaaactacacatgcatggcttagagatggacttaaacct
cgctgcattaccagggatcttaagtggggggttcctgtcccgcttgaaaaattcaaggat
aaggtcttctatgtttggtttgatgcacctattgggtatatatctattacttcatgctat
acacctgactgggaaaagtggtggaagaatcctgaaaacgtggagctgtatcagtttatg
ggcaaggataatgtgccattccatacagttatgtttccatctacacttattgggactaga
gaaaactggactttgatgaaaaacattagtgttacagagtatctaaactatgaatcagga
aagttctccaagagcaagggagtaggagtttttggcaatgatgcaagggatgcacaccac
cctgctgaagtctggcgatattatttgctagcgaacaggccggagatctcagacacaata
tttacatgggaggatttccaagcaaagttaaataatgagctgatacataatttgggcaat
ttcatccacagagtattgagcttcattgccaacacttcagggaaaggatatggaactgtc
attcctgatgctccaggagcagaatcacaccccttgacaataaaattcgcaatagatgtt
actaaccttgtggacgaatatgtaaaagccatggatcaggttaaattaaagcaaggatta
aaatgtgcaatgagcatttcaggtgctgggaatacatatctgcaagcgagccaatatttt
aggctatatgaagaagatcaagcttcctgctctatagtcgtgagaacttcagtgggtgta
gtttgtattcttgcccgtttgttagaacctttcatgccatcattttctcacaaggtattc
aagctgcttaagctgcctcctgaaacgacattttcgctttctgaagaagacgattgtctt
gagagagcaaaaagaccctgggaagtcatcccttctggtcatacaattgagaagctatat
cccttatttatgaaactgacggatgatgaggtcaaaggctttaaggccaagtatgctgga
agtggaactaataaagcaaagcaagagtctggatcaaagaagcttgccgagagattgaag
caaacacatatttgttga

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