KEGG   Ricinus communis (castor bean): 8270249
Entry
8270249           CDS       T01087                                 
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00260  Glycine, serine and threonine metabolism
rcu00460  Cyanoamino acid metabolism
rcu00630  Glyoxylate and dicarboxylate metabolism
rcu00670  One carbon pool by folate
rcu01100  Metabolic pathways
rcu01110  Biosynthesis of secondary metabolites
rcu01200  Carbon metabolism
rcu01230  Biosynthesis of amino acids
rcu01240  Biosynthesis of cofactors
Module
rcu_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    8270249
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    8270249
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    8270249
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    8270249
Enzymes [BR:rcu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     8270249
SSDB
Motif
Pfam: SHMT Aminotran_1_2
Other DBs
NCBI-GeneID: 8270249
NCBI-ProteinID: XP_002527226
UniProt: B9SMK7
Position
7:complement(5267140..5272584)
AA seq 515 aa
MAMAMALRRLSSSIDKPIRPLFNATSHYYMSSLPNEAVYEKEKSGATWPKQLNAPLEVVD
PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID
MAESLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLS
HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYD
YERIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYR
KGVKEVNKQGKEVLYDYEDKINQSVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQV
LSNCAKFAQTLAQKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG
DVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEFFDAAVKLAVKIKGETKGTKLKDFLATI
PQFQSDITKLRHAVEEYAKQFPTIGFEKGTMKYKN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggcaatggcaatggcgcttcggagactatcttcttccattgacaagcctattcgtcct
ctcttcaatgctacatctcactattacatgtcttctttgcctaatgaagctgtgtacgag
aaggagaaatctggtgccacttggccaaagcaacttaatgcaccactggaggttgtggac
cctgagattgctgacattattgagctcgagaaagcccgtcaatggaagggtcttgaactt
ataccctcagagaacttcacttctgtatcagtgatgcaagctgttggatctgtcatgacc
aacaagtacagtgaaggatatcctggtgcaagatactatggaggaaatgagtatattgac
atggcagaatccttatgtcagaagcgtgcattagaagcatttagattggatcctgctaaa
tggggagtgaatgtgcagtctctatctggatctccagcaaatttccaagtctacactgca
ttgttaaaacctcatgacagaatcatggcccttgatcttcctcacggtgggcacctttca
catggttatcagacggacaccaaaaagatatctgcagtgtcaatattttttgagacaatg
ccatacagattgaatgagagcactggctatattgactatgatcagctggagaaaagtgcc
gtcctcttcagaccaaagttgatagttgctggtgctagcgcttatgctcgtctatatgat
tatgaacggattcgcaaggtttgcgacaaacaaaaagctatactgttggcagatatggca
catattagcgggttagttgcagctggtgtcatcccatcaccctttgactatgcagatgta
gtgaccaccaccactcacaagtcccttcgtggacctcgtggagctatgattttctacagg
aagggggtaaaagaggttaacaaacaaggcaaagaggtcttgtatgactatgaagacaaa
atcaatcaatctgtttttcctggacttcaagggggccctcacaaccacacaattactggt
ttagcagttgctctgaaacaggccacaacctcagaatacaaagcttaccaagagcaagtt
ctcagtaattgtgcaaaatttgcacagacgttagctcagaagggatatgaactcgtgtct
ggcggaactgagaaccatttagttttggtgaatttgaagaacaagggtattgatggctcc
agagttgaaaaggtgctggaagctgttcacattgctgcaaacaaaaacaccgttcctgga
gatgtatctgccatggttcctggtggcataaggatgggaacccctgctcttacatctagg
ggatttattgaggaggactttgctaaggtagcagaattctttgatgctgccgtgaagttg
gcagtcaagatcaagggtgaaaccaaagggacaaagttgaaggacttcttggctacaatt
cctcagttccaatctgatatcacaaaacttcgccatgctgttgaagaatatgccaaacaa
ttcccaactattggatttgagaaaggaaccatgaagtacaagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system