KEGG   Ricinus communis (castor bean): 8274170
Entry
8274170           CDS       T01087                                 
Name
(RefSeq) protein RRC1
  KO
K12842  U2-associated protein SR140
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8274170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcu03041]
    8274170
Spliceosome [BR:rcu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    8274170
 Complex B
    8274170
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 8274170
NCBI-ProteinID: XP_002515412
UniProt: B9RNU3
Position
3:32594358..32603184
AA seq 977 aa
MSSFSITRKKTPFQKHREEEEAKKKREDDETARLYAEFVESFQGDNAPGSKTFVRGGTIN
PNDKLKTDSEGEKSKDGVSVPKKGSRYVPSFLPPPMAIKGKESEKKKEEERPKEKEKSKT
RNIDHFMEELKHEHEMREKRNLERERWRDGRTVEISAPSSRFDELPDDFDPSGKGSFDDG
DPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRA
DGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGATVILSGPSGP
PVTSVPNHNSELVLTPNVPDIMVVPPDDDHLRHVIDTMALYVLDGGCAFEQAIMERGRGN
SLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPTAKSPEH
EKESGNTYAAGKSRRVDPERTLTDPQRDEFEDMLRALTLERSQIKDAMGFALDNADAAGE
IVEVLTESLTLKETPIPTKVARIMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFND
LYRSITGRITAEALKERVMKVLQVWSDWFLFSDAYVNGLRATFLRSSTSGVIPFHSICGD
APAIEKKVTSEDTGDGGKTSQDAALAMGKGAAMKELLSLPLAELERRCRHNGLSLVGGRE
MMVARLLSLEEAEKQRGYELDDNLKVSQSHLSSSKFSSGRRETNVELEPVSEWNVYGEDD
VQSQSRASASLATFPIPQAELKAFTKKEKNDPVLPASKWARDDDDSDDEQKRSSRGLGLS
YSSSGSENAGDGLGKADDEMEFATDGSISVQPDSGMNEEQRQKLRRLEVALIEYRESLEE
RGMKSAEEIERKVASHRKRLQSDYGLLDSSQDTPGNSKRASSERRDRRDDSRESSRKRHR
SESSSRSPQRKTSTRDRERERENDSDRDRERHRAHDLENERWERDHHEKSGSRERDDHDR
DRGREKDRDRDRRRRVK
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgagttctttctcaattactcgcaaaaaaacacctttccagaagcatagagaagaggaa
gaagcaaaaaagaagagagaggatgatgaaacagctcgtttgtacgccgagtttgtagag
tcatttcaaggggacaatgctccagggtctaaaacttttgttcgaggtggaactatcaat
cccaatgacaaattaaagactgattctgaaggtgaaaagtccaaagatggggtatctgtt
ccaaaaaaggggagtaggtatgttccatcttttttgccacctccgatggcaatcaaggga
aaggaatctgagaagaagaaggaggaggaaaggccaaaggaaaaggagaaaagcaagaca
cggaacatagatcacttcatggaggagctgaagcatgaacatgagatgagggaaaagcgt
aatctggaacgtgaacgttggcgtgacgggcgtactgttgaaatttctgctccatctagt
cgatttgatgaactgcctgacgattttgatccgagtggaaagggatcatttgatgatggc
gatccacaaactacaaatctttatgttggaaatctatctcctcaggttgatgaaaatttt
cttctacggacttttggtagatttgggcctattgctagtgtgaaaataatgtggcctaga
acagaagaagagcgaaggaggcagagaaattgtggatttgttgcatttatgaatagagct
gatggacaggctgctaaagatgaaatgcaaggagttgttgtttatgaatatgagttgaag
atagggtggggtaaatctgtggctcttccatcacaagctctacctgctccgccaccggga
catatggccatcaggagtaaagagggtgccactgtaattctctctggcccatcaggcccc
ccagtcacatcagtcccaaatcacaattctgaactggttctaacaccaaatgttcctgat
ataatggttgttccacctgatgatgatcatctccgccatgtaattgatacaatggctctg
tatgttttggatggaggatgcgcttttgaacaagctatcatggaaagaggccgtgggaat
tctcttttcaactttctgttcgagcttggatcgaaggaacatacatactatgtttggagg
ctctattcttttgctcagggtgatactcttcaaagatggcgaacagaaccttttatcatg
ataactggtagtggaagatggattccaccatctctacccacagcaaagagcccagagcat
gaaaaggagtctggtaacacatatgctgcaggaaaaagcaggcgtgttgacccagaacga
accctgactgatccacagagggatgagtttgaggatatgctgcgtgcattaacattagaa
agaagtcagataaaggatgctatgggttttgctttggataatgctgatgctgcaggagag
atagttgaagttctaacggagtctctgactcttaaagaaactccaattccgactaaagtg
gcaaggatcatgcttgtctctgatattcttcataatagcagtgctcctgtaaaaaatgct
tctgcataccgtacaaaatttgaagccacgctgcctgacattatggagagttttaatgac
ttgtatcgtagtataactggaaggatcactgctgaggccctcaaggaacgagttatgaaa
gtgttgcaagtttggtcggactggtttctgttttctgatgcgtatgtgaatggattacgg
gctacttttcttcgatctagtacctctggtgttattccttttcattccatatgtggagat
gcaccagcaatagagaaaaaggttacttcagaagacacaggtgatggcggaaagaccagc
caagatgctgcattggcaatgggcaaaggagcagctatgaaggagctattgagtctgccc
cttgctgagctggaaagacgatgcagacataatgggttgtctcttgttggtggtagagaa
atgatggttgcacgattgcttagtttggaagaggcagaaaaacagaggggctatgaatta
gatgataacttgaaagtttctcagagccatttgagttctagtaaattttcaagtggccgc
agggaaacaaatgttgaattggagccagtgtcagaatggaatgtttatggggaggatgac
gtgcagtctcaaagcagagcatctgcatctttagcgaccttccccattcctcaagcggaa
ctaaaagccttcacaaagaaagagaaaaatgaccctgttttgccagcctctaaatgggct
cgagatgacgacgacagtgatgatgagcaaaagagaagttctagaggtttggggttgagc
tactcctcctctggaagtgagaatgctggtgatggcctaggtaaggctgatgatgaaatg
gagtttgctaccgatggtagcatttctgtgcaacctgacagcggcatgaacgaagaacag
agacaaaagttgagacgtttggaggttgctttgatagaatatcgtgaatcccttgaggag
cgcggaatgaaaagtgcagaggaaattgagaggaaagttgcaagccatcgaaaacggcta
caatctgattatggcttattggactcttctcaagatacccctgggaacagtaagagagca
tcttcagaaaggagggatcgaagggatgacagccgcgaatcgtcaagaaagcgacaccgc
agcgagagtagcagtcggagcccacagcggaaaacatcaaccagggacagggaaagggaa
agggaaaatgattcagatagggacagggaaaggcacagggctcatgatttggaaaatgaa
aggtgggagagagatcatcacgagaagagtgggagtagagagcgagatgatcacgacaga
gacagaggcagagaaaaagatagagatagggatagaaggagaagagttaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (49)   

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