KEGG   Ricinus communis (castor bean): 8275618
Entry
8275618           CDS       T01087                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    8275618
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rcu01009]
    8275618
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8275618
   03036 Chromosome and associated proteins [BR:rcu03036]
    8275618
Protein phosphatases and associated proteins [BR:rcu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     8275618
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     8275618
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     8275618
SSDB
Motif
Pfam: WD40 ComGF Me-amine-dh_H BetaGal_dom3
Other DBs
NCBI-GeneID: 8275618
NCBI-ProteinID: XP_002516465
UniProt: B9RRU6
Position
3:complement(30306815..30313253)
AA seq 513 aa
MDGGEASALLQAPPQPLEWRFAQVFGERTAGEEVQEVDIISAIEFDRSGNHLATGDRGGR
VVLFERTDMKDHGGNRRDLERMDFSVNRHPEFRYRTEFQSHEPEFDYLRSLEIEEKINKI
RWCQSANGALFLLSTNDKTIKFWKVQEKKVKKVCNMNVDPAKTTGNGPIVGAASMSTSPN
MYIANGGYLDRSSNHSSNDFSFSGDVQNLHLPVLISHETNLVARCRRIYAHAHDYHINSI
SSNSDGETFVSADDLRINLWNLEISNQSFNIVNLKPNNMEDLTEVITSAEFHPSHCNMLA
YSSSKSSIRLIDMRQSALCDTHSKSFEEQEVPGSRSFFTEIIASISDIKFAKDGRHILSR
DYMNLKLWDINMDSGPVASFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYS
NLFHVFGCSEGSTEATTLEATKNPMRRQVQTPSRPSRSMGNLSLGFRRGADSAGVDTNGN
ALDFTTKLLHLAWHPTENSLVCAASNSLYMYYA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggacggtggtgaggcgtctgctctgttacaggcgccgccgcagcccttggagtggaga
tttgcgcaggtgtttggtgaacgtacggctggtgaagaagttcaggaagttgatatcata
tcggctattgaatttgatagaagtggcaaccaccttgccactggagatcgtggtgggcgg
gtggttttatttgaaagaactgacatgaaagatcatggtggtaatcggagagatctagag
aggatggatttttcagtcaacaggcatcctgagttcaggtacagaacagagtttcagagt
catgaaccagagtttgattatctaaggagcttggagattgaggagaaaattaacaagatt
agatggtgccaatcagctaatggtgccctgtttcttctgtcgacgaatgacaaaaccata
aaattttggaaggtccaagagaagaaggtcaagaaagtgtgcaacatgaatgttgaccct
gcaaaaactacaggcaacggtcccattgtaggtgctgccagcatgtcaacaagccctaac
atgtatattgcgaatggaggatatttggataggtcctctaatcattcaagcaatgacttc
tccttttctggggatgtccagaatctgcatttgcctgtgttgatcagtcatgaaacaaac
cttgtggctaggtgccgaagaatatatgctcatgctcatgactatcatattaattccatt
tctagtaatagtgatggtgaaacatttgtatctgctgatgatctgcgaataaatctttgg
aatttggaaattagcaaccagagtttcaacattgttaatttgaagcctaacaacatggaa
gatctgactgaggtgattacttcagcagaatttcacccttctcattgtaatatgttggcg
tatagtagctcaaaaagctcaattcgtttgattgatatgcggcaatctgctctatgtgat
actcatagcaaatcgtttgaggaacaagaagtgcctggttcgaggtcctttttcacggag
ataattgcctcaatctcagatattaagtttgccaaggatggaaggcatatacttagtcgt
gattacatgaatctcaagttatgggatataaatatggattctgggccagttgcatccttc
caagttcatgaatacctgaggcctaagctttgcgatttgtatgaaaatgattccatcttt
gataaatttgagtgttgtctaagtggagatggattgcgagtggcaactggttcctacagc
aatcttttccatgtttttggctgttctgaaggtagcacagaagcaacaacattagaagcc
accaaaaatccaatgaggagacaagttcaaacaccatcaaggccttctagatctatgggc
aatctttctcttggttttagacgaggagcagatagtgctggagttgatacaaacggaaat
gcgttggatttcacgacaaagttgttacatttagcatggcatccaactgaaaattctctc
gtctgtgccgcctcaaatagcctttacatgtattacgcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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