KEGG   Ricinus communis (castor bean): 8275659
Entry
8275659           CDS       T01087                                 
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
  KO
K14304  nuclear pore complex protein Nup85
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    8275659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8275659
   03036 Chromosome and associated proteins [BR:rcu03036]
    8275659
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     8275659
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    8275659
SSDB
Motif
Pfam: Nucleopor_Nup85
Other DBs
NCBI-GeneID: 8275659
NCBI-ProteinID: XP_002516506
UniProt: B9RRY7
Position
3:complement(30611009..30617641)
AA seq 725 aa
MPGVPSASGGASDSISSNVLVPYLPESQVSVVYPLRHGLKPPISRVSISFARGNSLRISV
FRQPFSDSDTDSEIGGKVLEVKLGGNGDGELNDAYWRRIAYASVSPYALLKSRRNCASNL
SKLQLSPSPYHLEWWEYVMEYSKDISSFLVNPKSSTAGPVIEDPKEFLEKRERPTCLRAA
WDLMEIFYADKLAQSWIPERMVDWLSDYDILLSSTQETVYMKLVEFQEELVTLQVIEDNP
KFWEVISSALAVGWLEIAVKVLRLHGSYQLDQLGSRETENGLVEAVAVLVSKMPRIRPGL
TAGKLGECFKAKPDFMKAWERWRAQVTKLESSAFWVQCDHRRTREGLKNMLQIMLGNTNI
LSTMTCNWVEMYISHILYIRPFTVGLESMYSLAQKCIQLKPTSSPHKLMQLILGILGENT
EVILAECSRGFGPWMVTHAIELLTAGSVQAEMLLNEERDNLGGISIGELHQLVYAQVLSS
HILTWQIAPIYLISCIKQGMGLLESLLYRQPVQYNELLIKNLEICRLNELDSVSRDIMKI
AGVYHWKHGKKGSGVYWLRQARDEVSLNRIAQQLFDSVGKSISDESFKQWEGLIGLLGSE
SKPAGGLEFLHKYRDFKKSLKQVYDGKTTDAARVAAESLLSLMKSPSTPQRFWLPLLNDS
LKLLSWEERPLLNVSQTNLLLNKLQELSMARLHPDSVEADFPPQTLNSVRLALATNLGRA
ILEES
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgccaggcgtcccgtcggcttccggcggtgcgtcggattcaatcagtagtaatgtatta
gtcccctacttgccagaatctcaagtgtccgtagtttacccgctgcggcacggcctaaaa
cccccaatttcccgtgtatccatttctttcgctcgaggcaactccttacgcatatcagtt
tttcggcaaccattctccgattccgacactgattccgaaataggaggaaaggtactggag
gtgaagctaggcggcaatggagatggagagttaaatgatgcgtattggagaagaattgcg
tacgcctctgtctccccttatgcgctccttaaaagtcggaggaattgtgcttccaactta
tcaaaattgcaattaagtccttctccatatcatctggaatggtgggagtatgtgatggaa
tacagcaaagacataagttcatttcttgttaatcccaagtcctcaactgctggtccagtg
attgaagacccaaaggaattcttagagaaacgtgagcgaccaacctgtttaagggctgca
tgggatctgatggagattttttatgccgataagctggcccaatcatggattcccgagcgt
atggttgactggctgtctgattatgatatcctattgtccagcacacaggaaacagtttat
atgaaacttgtggagtttcaagaagaactagtcaccttacaggtcatagaggataatcct
aaattttgggaggtgatatcatcagcactagcagttggttggctagagattgcagtgaaa
gtgttgcggttgcatggatcttatcaactggatcagcttggcagtagagagacagagaat
ggtctggtagaggctgttgctgtgcttgtttcaaagatgccacgcattcgtcctggatta
acagctgggaaattgggtgaatgctttaaagccaagcctgactttatgaaggcatgggag
agatggcgagcacaagtaactaagttagagtccagtgcattctgggttcagtgtgatcac
cgtcgtacacgggagggattgaaaaacatgcttcagatcatgctgggaaacactaatatt
ctgtcaaccatgacttgtaattgggtggagatgtatatatctcacattctatacattagg
ccattcacagtaggtttggaaagcatgtacagcctagctcagaaatgcattcaattgaaa
ccaacttccagcccgcataagttgatgcagcttatacttggaatactcggagaaaatact
gaggttatattagcagaatgctcaagagggtttggtccttggatggtgactcatgccata
gagttattgaccgctggaagcgttcaagcggaaatgcttttaaatgaggagcgtgataac
ttgggtggaatcagtataggggagctccaccagcttgtttatgctcaagttctatcttcc
catatcttgacttggcaaattgctccaatttacttgatatcatgtataaagcaggggatg
ggattgctggagagtctattataccggcagcctgttcaatataatgaactgctgattaag
aatctggagatttgtcgtcttaatgaacttgacagtgtcagcagagacattatgaagatt
gcaggagtataccactggaaacatggtaagaaaggttctggagtttattggcttcggcaa
gctcgggatgaagtttctctcaacagaattgctcagcagttgtttgattctgttggaaag
tcgatctctgatgaaagtttcaagcaatgggaaggtttaattggattactgggttcagaa
tctaagcctgctggtggtcttgagttcctgcacaagtatagggattttaagaaatccctt
aagcaggtttatgatggaaaaactacagatgctgctcgggtagctgcagaatcactgttg
tcacttatgaaaagcccttctactcctcaacgtttctggctacctcttctaaatgattcg
ctgaaattgcttagctgggaggagcgacctctgctaaatgtctctcaaacaaaccttctg
ttgaataaactgcaagagttgtcgatggcaagattacatccagactctgttgaagcagac
ttcccaccccagaccttaaactctgtcagactagctcttgccacaaatcttggacgtgcc
atcttagaggaatcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system