KEGG   Ricinus communis (castor bean): 8277667
Entry
8277667           CDS       T01087                                 
Name
(RefSeq) lysine-specific histone demethylase 1 homolog 2
Organism
rcu  Ricinus communis (castor bean)
SSDB
Motif
Pfam: Amino_oxidase SWIRM NAD_binding_8 DAO Pyr_redox_2 Thi4 FAD_binding_3 FAD_binding_2 Pyr_redox HI0933_like GIDA FAD_oxidored AlaDh_PNT_C MurD-like_N Lycopene_cycl Pyr_redox_3 NAD_binding_9 Shikimate_DH 2-Hacid_dh_C SGT1
Other DBs
NCBI-GeneID: 8277667
NCBI-ProteinID: XP_002533711
UniProt: B9T642
Position
9:10171503..10174988
AA seq 750 aa
METPGQEGSVRKRSLRKKAGLRNYDENLMDELIENHLGGSFKKRNKTREDLEKETETEAM
IAISLGFPIDALLEDEIKAGVVRELGGKEQNDYIVVRNHILAKWRSNVKIWLSKGQIKET
VSNEYEHLISSAYDFLLYNGYINFGLLSSHANPMPELMNDKSVIIVGAGLAGLSAARQLM
SFGFKVVVLEGRNRPGGRVYTQKMGKKGQFAAVDLGGSVITGMHANPLGVLARQLSIPLH
KVRDNCPLYKPDGAPVDKEVDYKIEFIFNKLLDKVMELRQIMGGFGNDISLGAVLERLSQ
LYTVARTIEERQLLDWHLANLEYANAGCLSDLSATYWDQDDPYEMGGDHCFLAGGNWRLI
NALSEGVPIFYGKTVNTIKYGNEGVMVIAGRQVFEADIVLCTVPLGVLKKKTINFDPELP
RRKLAAIDRLGFGLLNKVAMVFPHVFWGEELDTFGCLNESSNKRGEFFLFYGNHTVSGGA
VLIALVAGEAAQIFENTDPSTLLHSVLSVLRGIYNPKGINVPDPIQTICTRWGSDPLSYG
SYSHVRVQSSGSDYDVLAESVRGRLFFAGEATTRQYPATMHGAFLSGLREASRILRVSRS
WQINSRKSMHRNVGLSNDALVDLFRRPDLAFGNFSFIDNPLIDDPESMGILRVTFENSGD
DLKKELENRHQNPWNLPLQLFVVLSRHQAHDLQLMSGSNEDKLSYLIKNMGLKLMGLTAL
VNASASLISSIINARRGRGRKIIAGQQSGI
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggaaaccccgggtcaagaaggatcagttaggaagaggtccttgaggaagaaagcaggt
ttgcggaattacgatgagaatttgatggatgagttgatagagaatcatttgggtggttct
ttcaagaaaaggaataaaactagagaggatttggaaaaagagacggaaactgaggctatg
atagcaatatctctgggattcccaattgatgcgttactcgaggatgagattaaagctggg
gtagtaagagaattaggtggaaaagagcagaatgattatattgttgtgagaaatcatatc
cttgcaaagtggagaagtaatgtgaagatatggctgtcaaagggacagattaaagaaact
gtgagcaatgagtatgagcatttgatttcttctgcttatgattttcttttgtataatgga
tatatcaattttggacttttatcatcacatgcgaacccaatgccagagttgatgaatgat
aagtctgttataattgttggcgcaggacttgctggtttatcagcagcaaggcagctcatg
tcttttggtttcaaggtggttgttttagaaggtaggaatcgtcctggagggagagtatat
actcaaaaaatgggtaaaaagggccaatttgctgctgtggatcttggtggcagtgtaatt
actggtatgcatgctaatcctctgggagttcttgctaggcaactttctattccactacat
aaagtccgggataactgtccattatacaaaccagatggtgcacctgttgataaggaagtt
gattataagattgaatttatcttcaataagttgctcgacaaagtcatggaacttagacaa
ataatgggtggatttggaaatgatatttctctaggtgcagttctggagagactcagtcaa
ttgtatactgtggctagaactatagaagagaggcaactgcttgattggcaccttgccaat
ttggaatatgcaaatgcaggatgtctatcagatctgtcagctacatactgggatcaggac
gatccttatgaaatgggtggggaccactgctttctagctggagggaactggagattgata
aatgcactgtctgaaggggttcctatattctatggaaagactgtgaacactattaagtat
gggaatgaaggagttatggtgattgctggtagacaagtgtttgaagcagatatcgtactg
tgcactgtgcctcttggagtcttgaagaaaaagaccatcaactttgacccagagttaccc
aggaggaagcttgcagcgattgatagattgggttttggactgcttaataaagtggcaatg
gttttcccccatgttttctggggggaagaattggatacttttggatgtctcaatgagagt
agcaataaacgtggagagttctttttgttctatggtaaccacactgtttctggaggtgca
gttcttattgcattggtggctggagaagcggcacaaatttttgagaacacggatccatct
actttactccactctgttttaagtgtcctgagaggcatatacaatccaaaaggcattaat
gttcctgatcccatacaaacaatttgtacaagatggggtagtgatcctctaagttatggt
tcatattctcatgttcgggtacagtcatctggcagtgactatgatgtgctcgcagaaagc
gttaggggccggctattttttgccggtgaggcgacaactaggcagtatccagccacaatg
catggtgcctttttgagtggtttaagagaagcttctcgcattttaagagtcagtagaagc
tggcaaattaattcaaggaagtccatgcataggaatgtcggactgagcaatgatgcattg
gtagatctatttaggagacctgaccttgcatttggaaacttttcattcatagataatcct
ttgatagacgacccagaatcaatgggcattctgagagttacatttgagaatagcggagat
gatctgaagaaggaactagagaataggcatcaaaatccctggaacctaccattgcagctt
tttgtagtattatcccgtcatcaggcacatgatctacagctgatgtcaggaagtaatgaa
gacaagttgtcatatttgattaagaacatgggcttgaaactgatgggtcttactgctctg
gtaaatgctagtgcttccttgatttctagcattatcaatgcacgaagagggcggggcagg
aagataattgctggacaacaaagcggcatatag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (36)   

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