KEGG   Ricinus communis (castor bean): 8277982
Entry
8277982           CDS       T01087                                 
Name
(RefSeq) leucine--tRNA ligase, chloroplastic/mitochondrial
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    8277982
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rcu01007]
    8277982
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcu03016]
    8277982
   03029 Mitochondrial biogenesis [BR:rcu03029]
    8277982
Enzymes [BR:rcu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     8277982
Amino acid related enzymes [BR:rcu01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   8277982
Transfer RNA biogenesis [BR:rcu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    8277982
 Prokaryotic type
    8277982
Mitochondrial biogenesis [BR:rcu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    8277982
SSDB
Motif
Pfam: tRNA-synt_1_2 tRNA-synt_1 tRNA-synt_1g Anticodon_1 tRNA-synt_1e
Other DBs
NCBI-GeneID: 8277982
NCBI-ProteinID: XP_002518434
UniProt: B9RXG5
Position
5:complement(31691894..31698339)
AA seq 960 aa
MSSPTYMLTQFLPSSPFHHRQFHFTKTTLSFKPAKNSVFNLNYGGFEFKSSRVRSSVNEE
QEQKQPMVKKAYPFHEIEPKWQRYWEDNHTFRTPDEIDTSKPKFYVLDMFPYPSGSGLHV
GHPLGYTATDILARFRRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRS
QLKSLGFSYDWDREISTIEPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEE
VVDGLSERGGHPVIRKPMRQWMLRITAYADRLLEDLDDLDWPESVKDMQRNWIGRSEGAE
MEFHVLDDDGKERDINLTVYTTRPDTIFGATYLVVAPEHSLLPSLVSLSQSKNVEEYKDL
ASRKSDLERTELQKEKTGVFSGCYARNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDTR
DYEFATAYDIPIRWVVKADDEGCSDSGMAYAGEGTILNSSNLTLGLDINGLSSKAAASKV
IEWAEKTGNGKKKVNFKLRDWLFARQRYWGEPIPVVFVEDTGEGVPLLETDLPLRLPELD
DFTPTGTGEPPLTKAVSWVKTTDPSSGKPAKRETNTMPQWAGSCWYYLRYMDPKNSNELV
NKTKERYWSPVDVYVGGAEHAVLHLLYSRFWHKVLYDIGVVSTKEPFKCVINQGIILGEV
QYMAFKDTDGNYVSADTADMSGVLHHEIIPEEKVIKSGDSFVLKDDCNIRLIARAHKMSK
SRGNVVNPDDVVSEYGADSLRLYEMFMGPFRDSKTWSTTGIEGVYRFLGRTWRLIVGSPL
SNGAFRDGTVAINEEPSFEQLRALHKCIAKVAEEIEGTRFNTGISAMMEFINAAYKWDKL
PRSVIEAYVLLLSPYAPHIAEELWFRLGHSNSLAYEPFPKANPAYLKDTRIVLPVQINGK
TRGTVEVEEGCSEEDAFRLASQDEKLSKYLDGKIVKTKIFVPGKILNVILGPQNVKAGVR
NT seq 2883 nt   +upstreamnt  +downstreamnt
atgagctctcccacttacatgcttacacaatttttaccttcgtctccttttcatcatcgc
cagtttcatttcactaagacaaccctctcttttaagcccgcaaaaaactcagtcttcaat
ttaaattatggcggatttgagtttaaaagtagtagagttaggagctcagtgaatgaagaa
caagagcagaagcagccaatggtgaaaaaggcttatccttttcatgaaatagagcccaaa
tggcagcgttattgggaggacaatcacacttttcgaaccccggatgaaattgacacttct
aagcctaaattctatgtccttgacatgttcccttatcccagtggctcgggattacatgtt
ggtcatccacttggatatactgccacagatattcttgctaggttcagacgtatgcagggt
tacaatgttttgcacccaatgggatgggatgcatttggtttacctgctgagcaatatgca
atcgagacaggaacccatccgaaaattacaactttgaggaacattaaccgtttccggtcc
cagcttaaatctttgggattctcatatgactgggatcgtgaaatttctactatagaacca
gaatattataaatggacccagtggatctttcttcagttattgaagagaggattggcatac
caggctgaggtaccagtcaattggtgccctgctcttggcacagttttggccaatgaagag
gtggtggatggattgagcgagcgtggtggtcatccagttataagaaagccaatgagacaa
tggatgctcagaattactgcctatgctgaccgccttcttgaagacttggatgaccttgac
tggcctgaaagtgtaaaagatatgcaaaggaactggatagggaggtctgaaggggctgag
atggaatttcatgttcttgatgatgatggaaaggaaagagacataaacttaactgtttac
actaccaggcctgacaccatctttggagcaacatatttagttgtggcaccagaacattct
ttacttccgtcactagtgtctctctctcagagcaaaaatgtggaagaatacaaagacctt
gcctcacgaaaaagtgaccttgagaggactgagcttcagaaggaaaaaactggggtcttc
agtggttgctacgcaagaaacccagctaatggggaagcaatcccaatatgggttgcagat
tatgttttggggagttatgggactggagcaattatggctgtgccagcacatgacactcgt
gactatgaatttgccactgcatatgacattccgattcgttgggttgtaaaggcagatgat
gaaggttgtagtgattcaggaatggcttatgctggtgaaggcactattctgaattcatca
aatttgacactaggtcttgatatcaatggcttgtctagcaaagcggcagcttccaaagtc
attgaatgggctgaaaaaactgggaatgggaagaaaaaggtgaatttcaagttgagggat
tggctttttgctcggcagcgatattggggagaacctatccctgttgtttttgtagaggat
actggtgagggtgttccacttcttgaaactgatttgccgctgagattacccgaattggat
gattttactcctacagggacaggagaaccacctctaactaaagctgtttcctgggttaaa
actacagatccttcatctggaaaacctgctaaaagagaaacaaacactatgcctcagtgg
gctggttcttgctggtactatttgagatatatggacccaaagaactcgaacgaattagtt
aataagacaaaagaaaggtattggagtccagttgatgtctatgttggtggtgctgaacac
gctgttctccacttactttattcgagattctggcacaaggttctttatgacattggcgtt
gtatcaaccaaagagcccttcaagtgtgtcataaaccaaggaatcatccttggggaagtt
caatatatggccttcaaggacacagatggaaattatgtgtctgctgacactgctgatatg
tcaggtgtacttcatcacgaaataattccagaggaaaaggtgataaaatctggggattca
tttgtgctaaaagatgattgtaacattcgtttgattgcccgtgctcataagatgagtaaa
agtaggggaaatgtagtcaatcctgatgatgttgtttctgagtatggtgcagactctctt
agattgtatgaaatgttcatgggaccctttagggattcaaaaacatggagtactactggt
attgaaggtgtgtatcgattcttgggaagaacttggaggctgattgtaggttcaccttta
tctaacggtgcttttagagatggaacggtggcaataaatgaggagccatcttttgaacag
ctgcgtgctctacataaatgcatagccaaggtagcagaggaaattgaagggacacgattc
aacactggaatttctgcaatgatggagttcatcaatgcagcatacaagtgggataaactt
ccaaggtccgtcattgaagcgtacgttttattgctgtcgccatatgcgcctcacatagct
gaggagctttggtttcggttagggcactcaaactcattggcatatgaaccctttcctaag
gcaaatcctgcttacctgaaggatacccgtatagtcctaccagttcagattaatggcaag
acacggggaacagtagaggttgaagaaggatgttcagaggaggatgctttcagattagct
tcccaggatgagaaactctccaagtatctggatgggaaaattgtaaagacaaaaatcttt
gttccaggaaagattctaaatgttattttgggacctcaaaatgtgaaggcgggtgtacga
tag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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