KEGG   Ricinus communis (castor bean): 8280499
Entry
8280499           CDS       T01087                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    8280499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rcu03009]
    8280499
Ribosome biogenesis [BR:rcu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    8280499
SSDB
Motif
Pfam: WD40 Utp13 NBCH_WD40 Nup160 WD40_like PROPPIN Cytochrom_D1 SGL Saw1
Other DBs
NCBI-GeneID: 8280499
NCBI-ProteinID: XP_002520064
Position
10:8545455..8553435
AA seq 881 aa
MASTQMKKNYRCVPSIQQFYSGGPFAVSSDGSFIACACGEAIKIVDSANGAVRATIEGDT
EAATALTLSPDDKLMFSAGHSRQIRVWDLSTMKCVRSWKGHEGPVMGMACHASGGLLATA
GADRKVLVWDVDGGFCTHFFKGHKGVVSSVMFHPDANKMLLFSGSDDATVRVWNLASKKC
IATLERHFTTVTSLEVSEDGWTLLSAGRDKVVNLWDLHDYTCKITIPTYEIVEDLCVIHS
GTQFSSLIGSYSQLSGKSRNGSSAIYFITVGERGIVRIWTSERAVCLYEQNSSDITVTSD
TDESKRGFTASVILPSDQGVLCVTADQQFLLYLAVGHPEEKFKLELNRRLIGYNEEILDM
RFLGEEEKCLAVATNIEQIRVYDLESMSCSYVLPGHTEIVLCLDTCVSRSGRALIVTGSK
DHTVRLWDSESRNCVGVGTGHMGGVGAVAFSKKLKNFFVSGSSDRTIKVWSLDGISEDAD
QFVNLKAKAVVAAHDKDINSLAIAPNDSLVCSGSQDRTACVWRLPDLVSVVVLKGHKRGI
WSVEFSPVDQCVITASGDKTIKIWAIADGSCLKTFEGHTSSVLRASFLTRGTQFVSCGAD
GLVKLWTVKTNECIATYDQHEDKVWALAVGKQTEMFATGGGDALVNLWYDSTASDKEEAF
RKEEEGVLKGQELENALLYADYTRAIQIAFELRRPHKLFELFSQICRKRGAVNQIENALR
ALGKEEFRLLFEYVREWNTKPKLCHVAQYVLFQVFNILPPTEILEIKGVGELLEGLIPYS
LRHFSRIDRLLRSTFLVDYTLIGMSVIEPNTEAAQTDIPTNVTNEETMLLAEEAEEEEQQ
PEVLKEKTRSKKRKSNKAKDGSHKKVKGTAYTSVAAIPLQA
NT seq 2646 nt   +upstreamnt  +downstreamnt
atggcatcaacacaaatgaagaagaattaccggtgcgtgccgtctatacagcaattttac
agcggtgggccattcgcagtttcgtcagacggttccttcatcgcctgtgcttgcggtgaa
gcaatcaagatcgttgattcggccaacggtgcagtaagagcaactattgaaggcgataca
gaggccgccacggctttgacacttagtcctgatgataaattgatgttctctgctggccac
agtagacaaattagggtttgggacttgtccactatgaaatgtgtgcgctcttggaaggga
catgaaggtccagtaatgggcatggcatgccatgcatcagggggcttgcttgcaacagca
ggagctgatagaaaagttcttgtttgggatgttgatggtggcttctgtactcatttcttt
aaaggtcataaaggtgttgtttcgagtgttatgtttcatcctgatgcaaataaaatgctt
cttttctctggaagtgatgatgcaactgtacgagtttggaatcttgcatcgaagaagtgc
atagcaacattagagagacattttacaactgtgacctctttggaagtgtctgaagacgga
tggacattactcagtgctggaagagataaggtggtaaacttgtgggaccttcatgactat
acctgcaagattacgattccaacttatgagattgtggaagatttgtgtgtaatccactct
gggactcagttttcttcattgataggttcatacagtcagcttagtggaaagagcagaaat
ggatcatcagcaatttatttcattacagttggtgagcgtggcattgtacgaatatggacc
tccgaacgtgcagtttgcctttatgagcaaaactcctcggatattaccgtcacctcagac
acagatgagtcaaaaagaggcttcactgcttctgtgatccttccttcagatcagggagtg
ctgtgtgtgactgctgatcagcagtttttactctatttggcagtgggacaccctgaagag
aagtttaagttagaattgaacaggagacttattgggtataatgaggagattctggatatg
aggtttctgggtgaggaggaaaagtgtcttgctgttgccacaaatattgaacagatccgg
gtgtatgacttggaatctatgtcgtgctcttatgtattgcctggtcatactgaaattgtt
ttgtgccttgacacctgcgtgtcaagatctggaagggcacttatagtaacaggaagcaag
gaccacactgtaaggttgtgggattcagaaagtagaaattgtgttggtgttggaacaggt
cacatgggaggtgttggagctgttgcattttcaaagaagttgaaaaatttctttgttagt
ggtagcagtgatcgtaccatcaaggtgtggagtttggatggtatctccgaagatgcagac
cagtttgttaatttgaaagcaaaggcagttgtagcagctcatgataaagatataaattct
ctggccattgcaccaaatgatagtttagtctgtagtggttctcaagaccggactgcctgt
gtatggaggcttccagatctagtatctgtagttgtactcaaagggcataaaagaggaatt
tggtctgttgagttctcaccagttgaccaatgtgtcattacagcatctggcgacaaaaca
ataaagatatgggctatagctgatgggtcttgcttaaaaacatttgaagggcatacatca
agcgtattaagagcttcatttttgactcgcgggacccaatttgtttcatgtggtgctgat
ggtttagtaaagctgtggactgtaaaaacaaatgaatgcatagccacatatgatcaacat
gaggataaggtttgggccttggccgtaggaaaacagacagaaatgtttgccactggtggt
ggtgatgcattggtcaatctgtggtatgattcaactgcctctgataaagaagaagccttc
cgtaaagaggaggaaggggttttaaaaggtcaggaattggaaaatgctttgttatatgct
gattacactagagctatccaaatagcatttgaacttcgcagacctcataaactttttgag
ttattttcccaaatttgcaggaagagaggcgctgtcaatcagatagagaatgcgcttcgt
gctcttggcaaagaggaattccgtctacttttcgagtatgttcgggaatggaatacaaag
ccaaaactatgccatgttgcacaatatgttctctttcaagttttcaacatccttcctcca
acagagattcttgagataaagggggtcggggaacttcttgaaggtctaatcccatattcc
ctgaggcatttcagcaggatagaccgattactaagaagcacatttttggtggactataca
ctgataggaatgtcagttattgagccgaacactgaagctgcacaaacagatatacccacc
aatgttacgaatgaggaaaccatgcttttagcagaagaagctgaggaagaggagcaacaa
cctgaagtgttgaaagagaaaactcgttcaaagaagcggaaatcaaacaaagctaaagac
ggttcacataagaaagtcaagggcacagcttacacaagcgtagctgctattccattacag
gcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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