KEGG   Ricinus communis (castor bean): 8280583
Entry
8280583           CDS       T01087                                 
Name
(RefSeq) TATA-box-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8280583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rcu03000]
    8280583
   03021 Transcription machinery [BR:rcu03021]
    8280583
Transcription factors [BR:rcu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    8280583
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     8280583
  RNA polymerase III system
    TFIIIB
     8280583
  RNA polymerase I system
    SL1/TIF-1B
     8280583
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 8280583
NCBI-ProteinID: XP_002517401
UniProt: B9RUF6
Position
5:29937818..29938431
AA seq 190 aa
MAIPSIPSDHLIPTPILQNIVSTVNLDCKLDLKDIALHSRNSEYNPRRFSAVIMRLRDPK
TTALLFASGKMVCTGAKSEAQSKIAARKYARIVQKLGFPAKFKDFKIQNIVASCDVNFRI
RLEKFVYSKHAAFSSYEPEIFPGMIYRMTKPKIVMLIFVSGKIVITGAKTREDTYAAFTN
IYPVLAGFAN
NT seq 573 nt   +upstreamnt  +downstreamnt
atggcgataccatcaatcccttcagatcatctaatccccacacccatactacagaacata
gtatcaactgttaacttagactgcaaactagacctcaaagacatagcactccactctcga
aattccgagtacaaccctaggcgtttctctgccgtaattatgcgactcagagaccctaaa
accaccgcattgcttttcgcatcgggcaagatggtctgcacgggcgctaaatcagaagct
cagtccaaaatagcagcaagaaagtatgcaagaattgtgcagaagttagggtttcctgca
aagtttaaagacttcaagattcagaacatagttgcatcttgcgatgttaatttccgcatt
agactggagaagtttgtttacagtaagcatgctgctttctcaagctacgaacctgaaata
tttcctgggatgatttatcggatgacaaagccaaagatcgttatgctaatatttgtatcg
ggtaaaattgtgattacaggagccaagacgagagaggacacctatgctgcctttacgaat
atctatcctgttcttgcagggttcgcgaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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