KEGG   Ricinus communis (castor bean): 8282186
Entry
8282186           CDS       T01087                                 
Name
(RefSeq) LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    8282186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rcu03009]
    8282186
   03032 DNA replication proteins [BR:rcu03032]
    8282186
Ribosome biogenesis [BR:rcu03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    8282186
 Prokaryotic type
    8282186
DNA replication proteins [BR:rcu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     8282186
SSDB
Motif
Pfam: DKCLD PUA UPF0113
Other DBs
NCBI-GeneID: 8282186
NCBI-ProteinID: XP_048235355
Position
9:complement(23462543..23464583)
AA seq 579 aa
MDQQQQNGTDQEQDLTMIKPQSFTPPNDTSKWPILLKNYDRLNVRTGHYTPLPSGHSPLK
RPLAEYIRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRAT
RLVKSQQGAGKEYVCVARLHDKVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIY
ESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEKDNM
VTMHDVMDAQWVYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGL
LRFENDVEVGEEVVLMTTKGEAVALGIADMTTAVMATCDHGVVAKIKRVVMDRDTYPRKW
GLGPKASMKKKLIAEGKLDKHGKPNENTTQEWTRNLVALPTGGDAIVASAAAAKESAMGN
KETAAIKKVTGEVEEGKEKKKKRKSKDESTESPAAEAPAKKAKVEKEDAIEVKKVKEEII
VEESEDEKKEKKKKKKKKSKEDSEAETLVEKETEKIKKKEHKDKAEAGSSDTEKSQKKKK
KKDKEAKEAAAVEDESMNGEADRSEKKKKKKKDRDEEEA
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggaccagcaacaacagaatggcactgatcaagaacaagacttgacaatgatcaaaccc
caaagcttcactcccccaaacgacacatccaaatggccaatccttttaaagaactacgat
cgtctcaatgtccgtacaggtcactacactccactcccatcaggtcactctccacttaaa
cgtccattagctgaatacattcgctatggagtaatgaatcttgataagccagcaaaccca
tcctctcatgaagttgttgcctggattaagcgcattcttagagttgaaaaaacaggtcac
agtggcactttagaccctaaggtcacaggtaatttaattgtttgtattgacagagccacc
cgtcttgttaaatctcaacaaggtgctggtaaagagtatgtttgtgttgctagattacat
gataaggttcctgatgttgctaaagttgctagagctctagaaacacttactggtgctgtt
tttcaacggccacctttaatttctgctgttaagagacaacttagaattagaactatttat
gaaagtaagctgttagagtatgacccagataggcatttagttgtattttggatttcttgc
gaagcgggtacttatgtcaggactatgtgtgttcatttgggtttaattcttggcgttggt
ggtcatatgcaagaattgaggagagttaggtccggaattttaggtgagaaagataatatg
gttactatgcatgatgttatggatgctcaatgggtttatgataattatagagatgagact
tatttgaggcgggtaattatgccgcttgaagtgcttttgactagttataagaggctggtt
gttaaggattctgctgttaatgctatttgttatggtgctaagttgatgattccggggctt
ttgaggtttgagaatgatgttgaggtcggtgaggaagttgtattgatgactacaaagggt
gaggcggtcgctttggggatcgccgatatgactactgctgtgatggctacttgtgatcat
ggtgttgtggccaagattaagagggtggttatggatagggatacttacccgaggaagtgg
ggattgggaccgaaggcttcgatgaagaagaagttgattgcagaagggaaattggataag
catgggaagccgaatgagaatactactcaagaatggacgaggaatttggtagccttgccc
acaggaggagacgctatagttgctagtgctgcagctgcaaaggaatcagctatgggaaat
aaggaaactgccgcaatcaagaaagtgactggagaagttgaggagggcaaggagaaaaag
aagaagaggaagagtaaggatgaaagcactgaaagccctgctgctgaagctcctgctaag
aaagctaaagttgaaaaagaagatgcaattgaggtgaagaaggtgaaggaagagataatt
gttgaggaaagtgaagatgagaagaaagagaaaaagaagaagaagaaaaagaagagcaag
gaagacagtgaagcagaaactttagtagaaaaggagacagagaagataaagaaaaaggag
cacaaggataaagccgaagctggttcatctgatacagaaaagtctcagaagaaaaagaag
aagaaagacaaagaggctaaggaggcagcagctgttgaggatgagagtatgaacggcgag
gctgatagaagtgagaagaagaaaaagaagaaaaaggacagagatgaagaagaagcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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