KEGG   Ricinus communis (castor bean): 8285119
Entry
8285119           CDS       T01087                                 
Name
(RefSeq) cysteine protease ATG4
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    8285119
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rcu01002]
    8285119
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcu04131]
    8285119
   03029 Mitochondrial biogenesis [BR:rcu03029]
    8285119
Peptidases and inhibitors [BR:rcu01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   8285119
Membrane trafficking [BR:rcu04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    8285119
Mitochondrial biogenesis [BR:rcu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    8285119
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 8285119
NCBI-ProteinID: XP_002529225
UniProt: B9STA6
Position
1:complement(12514278..12524792)
AA seq 489 aa
MKGFRERVASRCSSKCPVDTPNRSLTSDCLESGSNFSTKGSLWSSFFASAFSVFETYRES
PPASEKKGSHSRHNGWTSAVKKIVSGGSMRRIHERVLGPSRTGISSTTSDIWLLGVCYKI
SEDESGNADTGNGLAEFTHDYSSRILMTYRRGFDAIGDSKYISDVGWGCMLRSSQMLVAQ
ALLFHKLGRAWTKPFQKPMDQAYVEILHLFGDSEAAPFSIHNLIQAGKAYSLAAGSWVGP
YAMCRSWESLARSKREENSLEYQSLPMAVYVVSGDEDGERGGAPVVYIEDASRHCLEFSR
GQADWTPILLLVPLVLGLDKVNPRYIPSLQATFTFSQSLGIMGGKPGASTYIVGVQDDNA
FYLDPHEVQSVVNIGRDDIEADTSSYHSDIVRHIPLHSIDPSLAIGFYCRDKDDFDEFCL
LASKLADDSQGAPLFTVAHCHKLPKPVSHGDMLNNEDDEVQEDDSVNVMMPVNDDAEGGG
AQEDEWQLL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgaagggttttcgtgagagggttgcctcaagatgttcttctaaatgtccagttgatacc
ccgaatagatctttgacatctgattgtttggaatcagggtctaatttctccaccaagggc
tctttatggtcaagcttctttgcatctgctttctcagtgtttgaaacatatcgcgagtca
ccaccagcttcagagaagaaaggaagccactctagacacaatggttggacgtcagctgtg
aagaaaattgtgtcaggtggctcaatgaggaggattcacgagcgtgtattaggaccaagc
aggactgggatatctagcacaactagtgacatatggcttctaggtgtgtgctataagata
tcagaagatgagtctgggaatgcagatactggcaatggattagctgaatttacacatgat
tattcatcacgaattttgatgacgtatagaagaggctttgatgcaattggagattcaaaa
tatatcagtgatgtgggttggggttgcatgttaagaagcagtcagatgcttgttgctcag
gcattgctttttcataaattggggagagcttggacaaaacctttccagaagcctatggat
caagcatatgttgagatcttacacctttttggtgattctgaggcagcacctttctctatc
cacaatctaattcaggcaggaaaagcttatagccttgcagctgggtcatgggtaggccca
tatgccatgtgccgctcctgggaatctcttgcccgttctaagagagaggaaaacagcctt
gaataccagtcacttccaatggctgtttacgtggtttctggtgatgaagatggggagaga
ggtggtgctccagttgtctacattgaagatgcctctagacattgtttagagttttcaaga
gggcaagctgattggacaccaattcttctgttggtgcctttggttcttggacttgacaaa
gttaatccaaggtacataccatcactgcaggcgacattcaccttctcccaaagccttggc
attatgggtgggaaacctggtgcctcaacctatattgtgggtgtgcaagatgacaatgct
ttttaccttgatccgcatgaagttcaatcggtggtcaacattggcagagatgacatagag
gctgatacttcatcttaccacagcgacatcgtacggcatatacctctgcactcaattgat
ccatcattggcaattggattttattgccgagacaaagatgattttgatgaattctgtctg
ctggcatccaagctggcagatgactcacagggtgcgccgttatttactgtggctcactgt
cataaattgccaaagccagtaagccatggtgacatgttaaacaatgaagatgatgaggtt
caagaggatgattctgttaatgtgatgatgcctgtgaatgatgacgcagaaggcgggggt
gcccaagaggatgaatggcaactcctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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