KEGG   Ricinus communis (castor bean): 8288477
Entry
8288477           CDS       T01087                                 
Name
(RefSeq) bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like
  KO
K13832  3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rcu00999  Biosynthesis of various plant secondary metabolites
rcu01100  Metabolic pathways
rcu01110  Biosynthesis of secondary metabolites
rcu01230  Biosynthesis of amino acids
Module
rcu_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    8288477
  09110 Biosynthesis of other secondary metabolites
   00999 Biosynthesis of various plant secondary metabolites
    8288477
Enzymes [BR:rcu01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.25  shikimate dehydrogenase (NADP+)
     8288477
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.10  3-dehydroquinate dehydratase
     8288477
SSDB
Motif
Pfam: DHquinase_I Shikimate_dh_N SDH_C Shikimate_DH F420_oxidored DeoC adh_short GcpE NAD_binding_2 AAA_30 FAD_binding_2 IlvN Sacchrp_dh_NADP AdoHcyase_NAD
Other DBs
NCBI-GeneID: 8288477
NCBI-ProteinID: XP_002512300
Position
10:11756887..11761692
AA seq 531 aa
MTLGSVPFTTADLQIADGGRRNSTLICAPVMAKSVDGMLVQINKAKELGADLVEIRVDFL
ENFSPIQDLEILIKQSALPTLITYRPKWEGGEYDGDESKRQEALRLAIELGSDFIDVELK
VAPEFFNSIQGKKPEKVKIIVSSHNYENTPSVEEIANLVAKIQSTGADIVKVATTALDIT
DNARMFQVLVHAQVPMIGIVMAERGLMSRILAAKFGGFLTFGSIEAGVVSAPGQPTITDL
LDLYNLRQIGADTKVHGVIGNPIGHSKSPHLYNSAFKSVRFNGIYLPLLVDNVANYISTY
SSSDFVGYSYTIPHKEAGLKCCDEVDPIAQAIGAISCMIRRPSDGKLMGYNVDYLGAIGA
IEEALRASNGTPASGSPLAGKLFVVMGAGGAGKALAYGGYEKGARVVVANRSFDKAKELA
SKVGGQAMTLAELKDFHPEEGMILANTTSVGMKPRIDDTPLPKEALKHYSLVFDAIYTPK
LTRLLREAQECGATTVYGTEMFINQAFVQFERFTGLPAPKQLIRDVLAKNT
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgactctcggcagtgtcccgttcactactgcggatcttcaaattgccgatggaggtcga
agaaattctacgttaatctgtgctccagtaatggcaaaatcagttgacggaatgctggtt
caaataaataaggccaaggaacttggggctgaccttgttgaaattcgggtggatttcttg
gaaaattttagtcctatacaggatcttgaaatcctgattaagcaaagtgctttaccaact
cttatcacttatagaccaaaatgggaaggtggtgaatatgatggtgatgaaagcaagcgt
caagaagcattgcgtctggccatagaattgggatcagattttattgatgttgaactaaag
gtagctcctgagttcttcaattccattcaaggaaagaagcctgaaaaggtgaagattatt
gtatcttctcacaattatgaaaatactccatctgtagaggaaattgccaaccttgttgct
aagatacagtctactggagctgacatagtgaaggtagcaactacagctttagacatcaca
gataatgcacggatgtttcaagtacttgtacatgcacaggtgccaatgataggaattgtt
atggctgaaagaggtttgatgtcacggatacttgctgcaaaattcggaggatttctcact
tttggttcaattgaggcaggagtagtttctgctcctgggcaaccaactattacagactta
ttggacctatataatcttagacagattggagctgataccaaagtacatggcgtcattgga
aatcccattggtcatagcaaaagtcctcacctctacaattcagcatttaagtcagttcga
tttaatggaatttatctccctcttttggttgacaatgttgcaaattatatatccacatat
tcatcttcagactttgtcggatacagctatacaattcctcacaaggaagctggacttaag
tgctgtgatgaggttgatccaattgctcaggcaatcggagctattagttgcatgatccgg
agaccaagtgacggcaagctaatgggatataatgttgactaccttggagctataggagct
atagaagaagcactacgagcatctaatggtacccctgcttctggttctcccctggctggc
aaactctttgttgtcatgggagctggtggagctggaaaggcccttgcttatggtggatac
gagaagggagcaagagttgttgttgccaatcgctcatttgacaaagccaaagaacttgcc
agtaaagttggaggacaagcgatgactctagctgaactgaaagatttccatccagaagaa
ggaatgattcttgcaaacaccacttcagttggaatgaaaccaagaattgatgatactccc
cttcctaaggaagctttgaaacactactccttggtctttgatgcaatttatacaccaaaa
ttgaccaggctcttaagagaagcacaggaatgtggggccactactgtttacgggacagag
atgttcatcaatcaagcatttgtacagtttgaaagattcactggtttgcctgcaccaaaa
caactgatcagggatgtgctggcaaaaaatacatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (43)   

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