KEGG   Ricinus communis (castor bean): 8289816
Entry
8289816           CDS       T01087                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rcu03036]
    8289816
Enzymes [BR:rcu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     8289816
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    8289816
SSDB
Motif
Pfam: Sec63 DEAD Helicase_C ResIII HHH_5 Cdd1 DNA_pol_lambd_f AAA_22
Other DBs
NCBI-GeneID: 8289816
NCBI-ProteinID: XP_048230320
Position
5:30514329..30523745
AA seq 1260 aa
MFIICMLICFDFSNSCDFFSLILFSQQTSLAMDSYTLKSLSDLPEIFRSIFSFRYFNSLQ
SECFPICFHSDINMVISAPTGSGKTVLFELCILRVLSRFISEGRFNHIKGTLKTIYIAPS
KALVQEKLRDWNQKFGPLGINCLELTGDNEFYNKRTVQEADIILTTPEKFDAVTRYRIKD
GGLSFFSDIILLLIDEVHLLNDPRGAALEAIVSRIKMLAHNPEMKSSPLSCIRFLAVSAT
IPNIEDIAEWLSVPVEGIKRFGEEMRPVKLTTKVFGYTPAKNDFLFEKRLQNYVFDILMQ
YSRGKSALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKDKEQQERLREASLSCSDRQMQ
SYIIYGVGYHNGGLCLKDRSLVESLFLKGDIKILCTTNTLAHGINLPAHTVVIKSTQHFN
KEKGLYMEYDRSTILQMCGRAGRPPFDDTGLVIIMTRRETVHLYENLLNGCEMVESQLLS
CVTEHLTAEIVQLTVSDIARAIEWVKCSYLYVRMKKNPERYAVRKGISTDRIDKHVQEIS
LQKVNELSRHEMIWTGEDGFLLKPLELGRLMTKYYLKLDTMKHIMQTPDKCSLEDALNVI
CRAEEIAWIQLRRTEKKLLNDINIDKDGRLRFHINGDKGKRKKRIQTREEKIFVLANDCL
TGDPSAHDLSLTQDTNSICSNGCRIAKCMREYFIFKKNYKGAVNSILLAKSLYQKLWDDS
PYLLKQLAGIGMVTAKALHSMGIKSFGELAEADPRRIEIVTGRKFPFGNHIKDSLLSLPP
KVNIRIEETVCQRKGKSKLVVTLTRLSQPVQSIKRHYADMIVATEEDNLIHFHEKIRVDE
FTSPYSATLLLSISEGQKMTVKADLIFEEYIGLDFHNKLVLMDNDSDMNSKRGHKRPSFF
PPPEVVCVIEDDNETISYASSDRLCNWEKSKADNSSMPSFKLIDEELEEGAPAVEREKDN
SKIVSEQEIFDHIREKAKNFPNFTPSRTACSPSLETHLFTRKHRHENDLMLDGKPDAIEV
TEGSKTSQQTVLNLTSEFREMEHNEHNIKSSPTLQPSTTARSLFTMNLMEEKGGHNMRNL
TEETIFGHIREKADNFPVLSKIKQSESPAWTMEHYAENLPDFHIGASDALREMKSDDKIT
RNSIIISELEPGGIVGDACGATVIERKSSRSPRGTHESLSIPPKVSNISNAPSSIGILSF
DISMIKDTVGSMDTASSMEYNRKKRYSSNGSKRQCCSLAVEGKTSEVDSFLGFESVFSFL
NT seq 3783 nt   +upstreamnt  +downstreamnt
atgttcatcatttgcatgctaatatgttttgattttagtaatagctgtgattttttttct
ttaattttattctcacagcaaacaagcttggcaatggattcatatactctgaagtctcta
tcagatttgccagaaatatttcgttcaattttcagcttcaggtactttaattcgctgcaa
agtgagtgctttcctatctgtttccactccgatattaatatggttatctcagcaccaact
ggaagtggtaaaacagtgctctttgagctttgtatattgagggttctgtcaaggttcata
tctgaagggaggtttaatcacattaagggaactctgaagacaatctacatagcgccatct
aaggctttagtgcaggaaaaactccgggattggaatcagaaatttggtccactgggtata
aattgcttggaattgacaggggacaatgaattttacaacaaaaggacggtacaagaagca
gatattatcctaactactcctgagaaatttgatgctgtgactcgatatcgcataaaggat
ggtggtttgagcttttttagtgacattattcttctgcttatcgatgaagttcacctactg
aatgatccgcggggagcagcattggaggcaatagttagtagaataaaaatgcttgctcat
aaccctgaaatgaaatcaagtcctttatcttgtatccgttttctggcagtttcagccaca
attccgaacattgaggacattgctgaatggcttagtgttccggtcgaaggaatcaaaagg
tttggagaagaaatgaggcctgtaaagttgacaactaaagtttttggctacacaccagca
aagaatgactttctatttgaaaagcgccttcaaaactatgtttttgatattttgatgcaa
tattcaagagggaaatctgctcttgttttttgttcaactagaaaaggagcccaagaagca
gcacagcgactgtctcagacagcaatgacctttggctattcaaatccattcatcaaagac
aaagaacagcaggaaaggctgagggaggcttcactgtcatgtagtgacagacaaatgcaa
tcttatatcatttacggggttggttatcacaatggggggctttgcttgaaggatcgcagc
cttgttgagagtctctttctcaagggtgatattaaaatcctgtgtactacaaacaccctt
gctcatggaatcaacttacccgcacatacagttgtcataaaatcaacacagcacttcaac
aaggagaaaggtctttacatggagtatgacagatccacaatactgcagatgtgtgggaga
gcaggtcggcctccatttgatgatactggactggttataatcatgacaagaagagaaaca
gttcatctatatgagaatctcttgaatggatgtgaaatggtagaatcgcaattactttca
tgtgtgacagagcacttgactgcagagatagttcaattgactgtttctgacattgcaagg
gcaatcgaatgggtgaagtgctcatatttatatgtgaggatgaaaaagaaccctgagaga
tatgcagttagaaaagggatttctacagatcgaatagataagcatgtacaagagatttct
cttcagaaagttaatgagttgtcacgccacgaaatgatctggacgggtgaagatggattc
cttctaaagccactagagcttggaagattgatgaccaagtactatctgaaacttgatacg
atgaaacacatcatgcagaccccagataaatgcagtttggaagatgcacttaatgttatc
tgccgtgcagaggaaattgcttggatacaactcagacgcactgagaagaagcttctaaat
gacatcaatatcgacaaagatggccgacttcgctttcacataaatggagataaagggaaa
cggaaaaaacgtattcaaactagagaagagaagatatttgttttagcaaatgattgcttg
actggggatccttcagctcatgatttatccctaacccaggacacaaattctatatgctca
aacgggtgcagaattgctaagtgcatgagagagtactttattttcaaaaagaattataaa
ggagctgtgaactcaatccttctagccaaatcattgtatcagaaactatgggatgatagt
ccatacttgttgaaacaattggctggtataggcatggtgacagcaaaggctctacattca
atgggtatcaaatcatttggtgaactagctgaagctgatccgaggagaatagagatagtt
actggccggaagttcccatttgggaatcatatcaaggattctctgctgtcattacctcca
aaagtcaacattaggattgaggaaactgtttgccagaggaaagggaagtccaaactagta
gtgacattgactagattatcacaacccgtccaatcaatcaaacgacattatgctgatatg
attgttgctacggaagaagataacctgattcattttcatgagaaaataagagtcgacgag
ttcaccagtccctacagcgcaacactccttttatcaatttctgaaggacagaagatgaca
gtcaaggctgatcttatttttgaagaatacattggtcttgacttccataataaacttgta
ctgatggacaatgattcagacatgaactccaaacgtgggcataaacggccttcatttttt
cctccgcctgaggtagtctgtgtcatagaagatgacaatgaaactatatcttatgcttca
tctgataggctttgcaattgggaaaaatctaaagcagataacagctcaatgccgagtttc
aaactcatagatgaagagttggaagaaggtgcgccggctgttgaaagagaaaaggacaat
tctaaaattgtatctgaacaagaaatatttgaccatatacgtgaaaaagccaagaacttc
cccaacttcactccctcaagaactgcctgttctccatcgttagagacccatcttttcaca
agaaagcatcgtcacgagaatgaccttatgcttgatggtaagccggatgctatagaggtc
acagagggaagcaaaacttcacaacagactgtcctgaatctgacttcagaattcagggag
atggagcacaatgagcataatatcaaaagctctccgactctacagcctagcacaactgct
agaagtttgtttacgatgaacttgatggaagagaaaggtgggcataacatgcgaaattta
actgaagaaacaatatttgggcacataagggaaaaagccgataattttcctgtgttatcg
aagattaagcagtcggaatctccggcctggacaatggaacactacgctgagaatctgcct
gactttcacattggtgcttctgatgcattgagagaaatgaagtctgacgacaagattacg
aggaacagtataatcatttcagaactggagcctggaggaatagttggtgatgcatgtggg
gcaacggtgattgaaaggaaatcttctcgtagcccacgtggaacgcacgagagtttgagt
attcctccaaaagtttcaaacatcagtaatgctccatcttcaattggcattttgtctttt
gacatctccatgataaaggataccgttggatcgatggacacagcaagctccatggagtat
aacaggaagaagcgttattcctcaaatggatcaaaaaggcagtgctgctcgctggcagtg
gaaggcaaaacaagtgaagtagattcatttcttggatttgaaagtgtgttttcatttctt
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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