KEGG   Roseobacter denitrificans: RD1_2180
Entry
RD1_2180          CDS       T00376                                 
Symbol
cobQ
Name
(GenBank) cobyric acid synthase
  KO
K02232  adenosylcobyric acid synthase [EC:6.3.5.10]
Organism
rde  Roseobacter denitrificans
Pathway
rde00860  Porphyrin metabolism
rde01100  Metabolic pathways
rde01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:rde00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    RD1_2180 (cobQ)
Enzymes [BR:rde01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.10  adenosylcobyric acid synthase (glutamine-hydrolysing)
     RD1_2180 (cobQ)
SSDB
Motif
Pfam: GATase_3 CbiA AAA_26
Other DBs
NCBI-ProteinID: ABG31775
RoseoBase: RD1_2180
UniProt: Q167R8
Position
complement(2078032..2079477)
AA seq 481 aa
MGRAIMLQGTGSDVGKSLLVAGLCRAAKRRGISVAPFKPQNMSNNAAATTNGGEIGRAQA
LQAFACGLDPTVDMNPILLKPETETGSQVIVQGQRMTSVAAGDYAKLKPTLLGPVLDSFN
RLKAQYDLIIVEGAGSPAEVNLRSNDIANMGFAEAAQVPVLLCGDINRGGVIAQVVGTQA
VISPADAGMIKGFLINKFRGDPKLFDEGYEIIKNHTGWPGFGVLPWFTDAWKLPAEDAYD
IKTPPRKGGLHIVCLHLSRIANFDDMDPLSHEPGVQMTMLRAGEVLPADADIVILPGSKS
TRGDLAFLRAQGWDIDLAAHLRRGGHVLGLCGGYQMLGQSIADPDGIEGPPGTTEGLGFL
DITTVMTPQKRVARITAKHAQSGAMFPAYEIHVGRTDGPDCARPFAYVHGQPDGAISQNA
QVTGTYLHGMFTDDAFRAQWLAQFDVTQNASYTATVETTLDALATHLEAHADVDGILALA
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgggccgcgcgatcatgctgcagggcacaggctctgatgtcggcaagtcacttttggtg
gcagggctttgccgcgctgccaagcgtcgcggcatatctgtcgcgccgttcaagccgcaa
aacatgtccaacaacgcggcagccacgacgaacgggggcgagatcggccgcgcgcaggcg
ttgcaggcttttgcctgcgggctagacccaacggtggacatgaacccgatcctgctcaag
cctgaaaccgaaacaggctcgcaggtgatcgttcagggccagcgcatgacctccgttgca
gcgggcgattatgcaaagctgaaaccgacattgctcggccctgtgctcgacagtttcaac
cggctcaaggcgcagtatgatctgatcatcgtcgaaggcgccggcagcccggcagaggta
aacctgcgcagcaatgacatcgccaatatgggctttgctgaggcggcgcaggttcccgtg
ctactttgtggggacatcaaccgaggcggtgtgatcgcgcaggtcgtgggcacgcaagca
gtcatatcacccgctgatgcaggcatgataaagggcttccttatcaacaagtttcgcggc
gatcctaaactttttgatgaaggctatgagatcataaaaaaccatactggttggcccgga
tttggcgtgctgccgtggtttactgatgcctggaagctcccggctgaagacgcctatgat
atcaaaacgccaccccgcaagggtggtctgcacattgtgtgtctgcacctgtctcgcatc
gcaaatttcgacgatatggacccgctgagccatgaacccggcgtgcagatgaccatgttg
cgcgcaggcgaggttttgcctgcggatgcggatatcgtgatcttgccgggcagcaaatca
acgcggggtgatctggccttcctgcgtgcgcaaggatgggacattgatctggccgcgcat
ctgcgccgtggcggccatgtgctgggcttgtgcggtgggtatcagatgctggggcagtcc
attgccgaccctgatggcatagaaggcccccccggcacgacggagggtttggggtttctg
gacatcaccacggtcatgacgccgcaaaaacgggtcgcccggatcacagcgaaacacgcg
cagagcggtgcgatgttccccgcctatgaaattcacgttggtcgcacagacgggcccgat
tgcgcccgcccttttgcctatgttcacgggcaacccgatggtgcgatcagtcagaacgcg
caggtcacgggcacctatctgcacggtatgttcacggatgatgcgttcagggcgcaatgg
cttgcacagttcgatgtcacgcagaacgcatcctacacggcgacggttgaaaccaccctt
gatgctctggcgacgcatcttgaagctcatgcggatgttgacggtatactggcgctggcg
cgttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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