KEGG   Roseobacter denitrificans: RD1_3080
Entry
RD1_3080          CDS       T00376                                 
Name
(GenBank) sugar ABC transporter, ATP binding protein, putative
  KO
K10559  rhamnose transport system substrate-binding protein
Organism
rde  Roseobacter denitrificans
Pathway
rde02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    RD1_3080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rde02000]
    RD1_3080
Transporters [BR:rde02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   Rhamnose transporter
    RD1_3080
SSDB
Motif
Pfam: Peripla_BP_4 Peripla_BP_1
Other DBs
NCBI-ProteinID: ABG32591
RoseoBase: RD1_3080
UniProt: Q164K2
Position
complement(2952252..2953244)
AA seq 330 aa
MSVLKKLAASVALAGTMVASPALAEDVRIALVVKALGIGFFEAAAEGAQEAAEELGNVEI
IYTGPTDTTAEGQIEVINSLIAQQVDAIAVSSNDTDALVPALQRAMQRGITVISWDSGVA
PEGRQLHLNPSSNALIGNMIIKLAADHLPEGGEVALLSATTTSTNQNIWMEEMNKVMGNY
PDIEVVATVYGDDLADKSYREATGLMQSYPDLDAIIAPTSVGIVAAAQAVVDAGKVGQVN
VTGLGLPSEMAGAIESGASQSFAIWNPIDLGYSATMLAYELSQNGVEAAPGAEIPMGRMG
SLTLDENNEGAMADPFVYDASNIEQFKSIF
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagtgtacttaagaaactagcagcatccgttgcattggcaggaacgatggtcgcaagc
cccgcgctggcagaggacgtgcgcatcgcgctggtcgtcaaggcgctgggtatcggcttt
ttcgaagcggctgcggaaggtgcgcaggaggctgcggaagaacttggcaatgtcgaaatc
atctacacagggcccactgacacgaccgccgaagggcagatcgaagtcatcaattcgctc
attgcccagcaggtcgacgccattgccgtgtcttcaaatgacacggacgctttggtgccc
gcccttcagcgcgcgatgcagcgcgggatcacggtgatcagctgggattccggtgtggcg
ccagaggggcgtcagttgcatctcaacccatcgtccaacgcgctgattggcaatatgatc
atcaaactggctgcggatcatttgccagagggcggcgaggttgccttgctctctgcgacc
acaacatccaccaaccagaacatctggatggaggagatgaacaaggtgatgggcaactat
ccggatatcgaagttgtcgcgacggtatacggggatgatcttgccgataaatcctaccgc
gaggcgaccggcctgatgcaatcctatccggatctggacgccatcatcgcgccgacatcc
gtcgggatcgtggctgcggcgcaagccgttgtggatgcgggcaaggtcggtcaggtgaat
gtcacgggccttggcctgccatccgaaatggccggcgcgattgaatcgggtgcctcgcaa
tctttcgccatttggaacccgattgatctggggtattccgcgaccatgcttgcctatgaa
ctcagccagaacggcgttgaggccgcgcccggtgccgaaatccccatggggcgcatgggc
agcctgacgcttgatgaaaacaacgaaggcgccatggccgatcccttcgtctatgacgcc
agcaacatcgagcagttcaagtcgattttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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