KEGG   Roseobacter denitrificans: RD1_3217
Entry
RD1_3217          CDS       T00376                                 
Symbol
com
Name
(GenBank) competence protein, putative
  KO
K02238  competence protein ComEC
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rde02044]
    RD1_3217 (com)
Secretion system [BR:rde02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   RD1_3217 (com)
SSDB
Motif
Pfam: Competence DUF4131
Other DBs
NCBI-ProteinID: ABG32719
RoseoBase: RD1_3217
UniProt: Q163X4
Position
complement(3081674..3083785)
AA seq 703 aa
MGSVFLNPCLSSAVNGGKTVLLAAIRSQLLHQRGYLFEWAPVCLAVGIGIYFSLRFEPAQ
AHLAGLAGLAVLVLILSRFLGEAFSPLAIALTLVATGFLLAAHRAHDMSGPVMGWRYYGP
IEGRVVNLDRSSSDALRITLDEVTLENLRPERTPLRVRISLHGDQSHSVTPAPGMRIMTT
GHLSPPGGPVEPGGFDFQRHAWFMQLGAVGYTRVPILAIAPASEGNAGLAVFRVRMAAAE
HILNVLPGDTGGFAVAVTTGARSAISQQALDDLRASNLAHLLAISGLHMGLLTAFVFGLI
RSILALIPPIALRWPTRKLAAGGALIVASGYLALSGGNVATERAFVMVAVALCAIMVNRR
AISLRSVAIAAIIVLVLRPEALLGPGFQMSFAATTALVAVFGFMRDYKIMIGPKWVQPVV
AVLLASGISGLATAPVGAAHFNTISHYGLIANLLSVPVMGSVVVPAAVLALCLAPLGLDW
LGLWIMGVGLRWILEVGSFVAGLDGARSYVAGPGAAVLPMIALGFLWLVLWQGRARLIGV
VPVLLAFWLWQGTVRPIGLIAENGTLVGLMTEDGRALSKAKGAGFIARNWLENDGEAVAQ
AEAAARWDKSLAGVLPEGGHLVHLSGKRAAAGFDGCDARDIVVSSVELNPTGFDCDVFDP
IRLRGVGAVAIHHDKAGLRLVSVKDLTGTRLWTRWRAPKDRSQ
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggggagcgtatttctaaacccgtgtctatccagtgcggtgaacgggggcaagacggtg
ctgcttgcagccatcagatcacaattgctgcatcagcgcgggtatctctttgaatgggca
ccggtttgtctggccgtgggtatcggaatttatttttccctgcgctttgaaccggcgcag
gcgcatcttgcaggccttgctggtctggcggttctggtgttgatcctgtcgcggtttctg
ggggaggcgttcagcccgctggccattgcgctgaccctcgtggccacgggctttctactc
gccgcgcaccgcgcccatgatatgtccggcccggtgatgggctggcgctactacggtccg
atcgaggggcgcgtggtcaaccttgaccgcagcagttcagacgcgctgcgcataactctt
gatgaggtcacgctcgaaaacctgcgccctgaacgcacaccgctgcgcgtgcgcatctcg
ctgcacggcgatcaaagccatagcgtgacgcctgcgccgggcatgcgcatcatgacgacg
gggcatttgtcgccccccggtgggccggttgaaccgggcggttttgattttcagcggcat
gcgtggtttatgcaactcggcgcggttggctacacgcgcgtgcccattctggcgattgcc
ccggcgagcgagggcaacgccgggctggcggttttccgggtgcgcatggcagcggccgaa
cacatcctgaacgtgctgccgggcgataccggcggctttgcggtggcggtcacgacgggc
gcgcgatccgccatcagccagcaggcgcttgatgatctcagggcatcgaaccttgcgcat
ctgctcgcaatttcgggtctgcatatgggtcttttgacggccttcgtctttggtctcatc
cgcagcattctggccctgatcccgccgattgccctgcgctggccgacgcgcaagctggcc
gccggaggcgcgttgattgttgccagcggttatctcgccctgtccgggggcaatgtcgcg
accgagcgtgcctttgtcatggtcgccgtggcgctctgtgccatcatggtgaaccggcgc
gcgatcagcctgcgttccgtcgcgattgcggccatcatcgtactcgtcctgcgtcccgaa
gctttgctcggaccggggttccagatgtcattcgccgcgaccacggcgctggtggctgtc
tttggcttcatgcgggattacaagatcatgatcgggccgaaatgggtgcagccggttgtg
gccgttctgctggcatcgggtatttccggactggccacggcacccgttggcgcggcacat
ttcaacacgatctcacattatggtctgattgcgaacctgctgtccgtcccggtgatgggc
agcgtcgtggtgccggctgcggtgctggcactgtgtcttgcaccgctcgggctggattgg
ctggggctgtggatcatgggggtcggactgcgctggatccttgaggtcggcagctttgtg
gcgggccttgatggcgcgcggtcatacgttgcgggccccggggccgctgtgctgcccatg
attgcgctggggttcttgtggctggtgttgtggcaggggcgcgcgcggctgatcggtgtt
gtgccggtgctgctggcgttctggctctggcaggggaccgtgcgcccgattgggttgatc
gcggaaaacggcaccctcgtgggcctcatgaccgaagacggtcgcgcgctcagcaaggca
aagggggcggggttcattgcacgcaattggctcgaaaacgacggcgaagcggtggcgcaa
gcggaggctgcggcgcgttgggataaaagcctcgccggcgtgctgccggagggcggccac
ctcgtgcatctgtcgggcaaacgggcagcggcgggttttgacgggtgtgacgcgcgggac
atcgtggtcagctcggtcgaactgaacccgaccgggttcgactgcgatgtgtttgatccg
atacgcctgcgcggcgtcggggcggtcgccattcatcatgacaaggccggacttcgactt
gtctcggtcaaggatttgacgggcacgcgcctctggaccagatggcgcgccccaaaagac
cgcagtcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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