KEGG   Roseobacter denitrificans: RD1_4131
Entry
RD1_4131          CDS       T00376                                 
Name
(GenBank) polyamine ABC transporter, ATP-binding component, putative
  KO
K11072  spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
Organism
rde  Roseobacter denitrificans
Pathway
rde02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    RD1_4131
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rde02000]
    RD1_4131
Enzymes [BR:rde01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.11  ABC-type polyamine transporter
     RD1_4131
Transporters [BR:rde02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Spermidine/putrescine transporter
    RD1_4131
SSDB
Motif
Pfam: ABC_tran TOBE_2 AAA_21 SMC_N AAA_22 AAA Rad17 nSTAND3 ATPase_2 ABC_ATPase RsgA_GTPase AAA_28 AAA_16 AAA_29 NB-ARC NACHT nSTAND1 sCache_3_2 AAA_14 AAA_23 AAA_27 AAA_5 TsaE
Other DBs
NCBI-ProteinID: ABG33571
RoseoBase: RD1_4131
UniProt: Q160M2
Position
3998798..3999889
AA seq 363 aa
MSHEVPNAIDVRNAVKRYGDFTALKTISLSIRDNEFFTLLGPSGCGKTTLLRMIAGFEDV
TEGEIFLYGEEIEDLPPNRRPVNTVFQNYALFPHMDVMENVGFGLEMLGKPKAQARARAG
EILELVQLSQFANRKPSQLSGGQQQRVALARALAPQPKVLLLDEPLSALDLKLRKAMQLE
LKHLQRETGITFIFVTHDQDEALTMSDRIAVMSAGELQQLGDARDIYEKPANRFVADFIG
ETNLFEVTIKSRDGTRVLCAFLNGLTLTCDAVAGMDVGDRVHMSIRPERIKLRSSKVETE
NFQAQVVENIYAGTDVQTIVHLQGGMPLAVRTQNSEIGRSMTFEPGAEVFVDVEFGSARL
LAN
NT seq 1092 nt   +upstreamnt  +downstreamnt
gtgtcgcatgaggttccaaacgcgattgacgtgcgaaacgcggtaaagcgttatggtgat
ttcaccgccctcaaaacgatctcgctgtcgatccgggacaatgaattcttcacgctgctt
ggtccgtcaggctgcggaaaaacaacgcttttgcggatgatcgccggtttcgaagatgtc
acggagggtgaaattttcctctatggtgaggaaatcgaggatttgccgcccaacaggcgc
ccggtcaacacggtctttcagaactacgcgctttttccgcatatggacgtgatggaaaac
gtgggcttcggactggaaatgctgggcaagcccaaagcgcaggcacgcgcgcgggcgggc
gaaattctggaactggtgcaactgtcgcaattcgccaatcgcaaaccgtcgcaactgtct
ggcggtcagcagcaacgtgtggcgctggcccgcgcgctggccccgcaaccaaaggtcttg
ttgctggatgagccactgtcggccctcgatctgaaactgcgcaaagcgatgcagctagag
ctaaagcatttgcaacgcgaaacgggcatcacattcatctttgtgacccatgatcaggac
gaagcgttgacgatgtcggaccggatcgcggtgatgtccgcaggcgaattacagcaactc
ggcgatgcccgcgacatctatgaaaagcctgcgaaccggtttgtcgctgatttcatcggg
gagaccaatctgtttgaggtgacaatcaaatcacgtgacggcacccgcgtgctgtgtgcg
tttttaaatggccttaccctgacctgtgacgcggtggcgggcatggacgtcggcgatcgg
gtgcatatgtccatccgccctgagcggataaaactgcgcagcagcaaggttgaaacagag
aactttcaggcacaggtcgtcgaaaatatctatgccggaaccgatgtgcagacgattgtg
catctgcagggcggaatgccgctggccgtgcgcacgcagaactccgagatcggcaggtca
atgacatttgaacccggcgcggaggttttcgtcgatgtcgaattcggctctgcccggttg
ctggcgaactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (23)   
   Pfam (23)   
All databases (61)   

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