KEGG   Roseobacter denitrificans: RD1_A0013
Entry
RD1_A0013         CDS       T00376                                 
Name
(GenBank) RC163, putative
Organism
rde  Roseobacter denitrificans
Pathway
rde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RD1_A0013
SSDB
Motif
Pfam: T4SS GCE_fung T4_CASP End_beta_barrel
Other DBs
NCBI-ProteinID: ABI93317
RoseoBase: RD1_A0013
UniProt: Q07GT2
Position
pTB1:complement(13178..13888)
AA seq 236 aa
MKPFRNRMAVTCLIASVSFGGAAQAQGVPVIDTTAIAQFVAQLDQARQAYTVQLQELTNL
ENQLASMIGPRAISAILNDVTEIQKRVSATSLNEIQDAVLSGTALTDLAELNDAISDIRN
RFDLAGLNDIFTSLEPIDAAITEQATAGVAAIATAEDTYVRANDAMDRINTMITGIDGNA
DLKASIDYNTRVMAELAVLLNENLRVQAAATNVAGANALAQARDNAAARQFNLIGD
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaaaccattccgcaacaggatggcagtcacctgtcttatcgcttcggtctcctttgga
ggggcggcgcaggcgcagggcgtccccgtcatagacaccacggcaatcgctcagtttgtc
gcgcaactggatcaggcgcggcaagcctataccgtccagcttcaggagttgaccaacctt
gaaaaccaactggcgtcgatgattggcccgcgtgcaatctcggccattctcaacgatgtg
acagagatccagaaacgggtctcggccacgtcgctgaacgagatacaggacgccgtgctg
tctggtacggcgctcaccgatctggcggaactgaacgatgctatttccgacatccgaaac
cggttcgatctagcggggctcaatgatatttttacctcccttgagccgattgatgccgca
atcaccgaacaggcgacagcgggcgtggcagcaatcgccacggcggaggacacctatgtg
cgggccaatgatgcgatggaccggatcaacacgatgatcaccggcatcgacggtaacgcc
gatctgaaagccagcattgattacaacacgcgcgtcatggccgaactggctgttttgctg
aacgagaacctgcgggtgcaggccgcggcgacaaatgtcgccggtgccaatgcactcgcc
caggcgcgggacaacgccgccgcacgtcaattcaacctgataggagactaa

  All links  
Gene (5)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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