KEGG   Roseobacter denitrificans: RD1_B0019
Entry
RD1_B0019         CDS       T00376                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
rde  Roseobacter denitrificans
Pathway
rde00521  Streptomycin biosynthesis
rde00523  Polyketide sugar unit biosynthesis
rde00525  Acarbose and validamycin biosynthesis
rde00541  O-Antigen nucleotide sugar biosynthesis
rde01100  Metabolic pathways
rde01110  Biosynthesis of secondary metabolites
rde01250  Biosynthesis of nucleotide sugars
Module
rde_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:rde00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    RD1_B0019 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    RD1_B0019 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    RD1_B0019 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    RD1_B0019 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    RD1_B0019 (rfbB)
Enzymes [BR:rde01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     RD1_B0019 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short NmrA adh_short_C2 NAD_binding_10 Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: ABI93428
RoseoBase_p2: RD1_B0019
UniProt: Q07GH1
Position
pTB2:complement(21286..22362)
AA seq 358 aa
MKLLVTGGAGFIGSAVVRQAIAQGHHVVNLDALTYAACLENVASVADNPAYVFEHADIRD
RAALDRVFASHKPDAVMHLAAESHVDRSIDGPGDFIETNITGTYHLLEAARSFWTAQGKP
EGFRFHHISTDEVFGSLGATGQFTETTPYDPRSPYSASKAASDHLVRAWAETYGLPIVMT
NCSNNYGPYHFPEKLIPVVILNALAGKDIPVYGVGENVRDWLYVEDHADALLTVLAKGAV
GRSYNIGGENEAKNIDIVRMICAILDTKKPKTTPSGSAAAGHDKPSYADQITFVTDRPGH
DLRYAIDPTRIATELGWRPSVTLEEGLEKTVQWYLDNEDWWRALQTRDGVGERLGARP
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgaaacttctggtgaccgggggcgcggggttcatcggctctgcggtggtgcggcaggcg
attgcacaggggcaccatgtggtgaaccttgatgcgctgacctatgcggcatgtcttgag
aatgtggccagtgtcgcggacaaccccgcctatgtttttgagcacgccgatatccgcgac
cgtgcggcgctcgaccgggtctttgccagccataaacctgacgcggtgatgcatctggcg
gcggaaagccatgtggaccgctccatcgacgggccgggcgatttcatcgagaccaacatc
accggcacctaccacctgctggaggccgcgcgcagcttttggacagctcaaggtaagccc
gaaggtttccgctttcatcatatctccaccgatgaggtgtttggctccctgggcgcgacc
ggacaattcaccgaaaccacgccttacgatccgcgctcgccctattcagcgtccaaggcg
gccagcgaccacctggtgcgcgcctgggcggaaacctatgggctgcccatcgtgatgacc
aattgttcgaacaattacggcccctaccatttccccgaaaagctgatccccgtggtgatc
ctgaacgcgctggcgggcaaggatatccccgtctatggcgtgggcgagaacgtgcgcgac
tggctttatgttgaggatcacgcggatgcgttgctcacggtgctggcgaaaggggcggtg
gggcgcagctataacatcggtggtgaaaacgaggcgaaaaacatcgatatcgtgcggatg
atctgcgccatattagacactaaaaaacccaaaaccacgccctcaggcagcgcagcggca
gggcatgacaaaccctcctacgcggatcagatcaccttcgtcaccgaccgccccggccat
gacctgcgctacgccatcgaccccacccggatcgccacagaactgggctggcgcccttcg
gtcacgctggaggagggcctggaaaaaaccgtgcaatggtatctcgacaacgaagactgg
tggcgcgccctgcaaacccgcgatggggtgggcgaacggttgggcgcgcgcccatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE_P2 (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (46)   

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