KEGG   Rhizorhabdus dicambivorans: CMV14_13035
Entry
CMV14_13035       CDS       T05084                                 
Symbol
trbJ
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMV14_13035 (trbJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rdi02044]
    CMV14_13035 (trbJ)
Secretion system [BR:rdi02044]
 Type IV secretion system
  Trb secretion system protein
   CMV14_13035 (trbJ)
SSDB
Motif
Pfam: NUFIP2 DUF4141 NPV_P10 DUF948
Other DBs
NCBI-ProteinID: ATE67319
Position
complement(2754921..2755652)
AA seq 243 aa
MNKHLIASALALTASGSLALCLTLPATPAQALTVFDPSNYSQNILTAARTLQQINNQIKS
LQNEANSLINQAKNLTTIDFPELQVLTQTLRQVDQLMGQAQGIRFQVSGLDQQFSQLFPK
AFSSALRTNEQVIAARSRLDTAMSAYQQTMTVQAQVVENVAADAQTLSAIVAKSQGAEGS
LQAQQATNQLLALTAKQQFQIQNMMAAQYRAETIEQARRAQAQIDARAATTKFLGSGSAY
TPR
NT seq 732 nt   +upstreamnt  +downstreamnt
atcaacaaacatcttatcgcgagtgccctcgccctcactgccagcggttcgctggccctc
tgcctgacattgccagcgacgcccgctcaggccctcactgtgttcgatccgagcaactac
agccagaacatcctgaccgccgcgcgcacacttcagcagatcaacaaccagatcaagtcc
ctgcagaacgaagcgaacagcctgatcaatcaggcaaagaatctgacgaccatcgatttc
cccgagttgcaggtgctgacccagaccctccggcaggtcgaccagttgatgggccaggct
cagggcataagattccaggtatctggcctcgaccagcagttcagccagcttttcccgaaa
gccttctcctctgcgctgcgcaccaatgagcaggtgatcgcagcgcgcagtcgcctcgat
acggcaatgtccgcttatcagcagaccatgacggtgcaggcgcaggtcgtcgagaatgtc
gctgccgatgcccagaccctgtcggcgatcgtggccaagagccagggcgctgaaggatcg
ttgcaggctcagcaggccaccaaccagttgctggcgctgacggccaagcagcagttccag
attcagaacatgatggccgcgcaatatcgcgccgagacgatcgagcaggcccgccgcgcg
caggcccagatcgatgcccgcgccgccaccacgaagttcctcggttccggctcggcctac
acgccccgatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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