KEGG   Rhizorhabdus dicambivorans: CMV14_19255
Entry
CMV14_19255       CDS       T05084                                 
Name
(GenBank) conjugal transfer protein TrbE
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMV14_19255
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rdi02044]
    CMV14_19255
Enzymes [BR:rdi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     CMV14_19255
Secretion system [BR:rdi02044]
 Type IV secretion system
  Trb secretion system protein
   CMV14_19255
SSDB
Motif
Pfam: P-loop_TraG AAA_10 AAA_22 CagE_TrbE_VirB ABC_tran TraG-D_C AAA_29 AAA_16 TrwB_AAD_bind FtsK_SpoIIIE HerA_C AAA_23 DUF87 AAA_7
Other DBs
NCBI-ProteinID: ATE67460
UniProt: A0A2A4FVR2
Position
4090795..4093230
AA seq 811 aa
MMSLREYRSKAAHLADFLPWAALVGEGVVLNKDGSFQRTARFRGPDLDSATPAELVATTS
RLNNSLRRLGSGWAIFVEAQRTPALDYPEDDFPDPVSALVDMERREQFREEGAHFESAYF
LTLLWMPPAEEAARAEGWLYEGRSTTGVDPWELLKGFTDRSDRVLNLVEGFVPEVRWLDD
GETLTYLHSTISTRRQRVRVPETPMHLDALLADEPLTGGLEPCLGDHHLRTLTITGFPSS
TFPGLLDELNRLAFGYRWSTRAIMLDKIDATKLLTRIRRQWFAKRKSVAAILKEVMTNEA
STLLDSDASNKAADADTALQELGADYAGMAYVTATVTVWDRDPAIAAEKLRLVEKVIQGR
DFTVIPEGMNAIEAWLGSLPGHTYANVRQPPISTINLAHLIPLSAVWAGPERDEHFGAAP
LLYARTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLALMAMQFRRYENSQVFAFDFGG
SIRAAVIGMGGDWQDLGGMLADEAGDGVQLQPLARIDDPAERAWAAEWLAAILASEGVAV
DPQAKEHIWSALNSLASAPVSERTLTGLAVLLQNQQLKQALASYCIGGPWGRLLDAEDER
LGEAAVQAFETEGLVGAGSAAAVLSYLFHRIDGRLDGSPTLIIIDEGWLVLDSPDFAAQL
REWLKTLRKKNASVVFATQSLADIETSSIAPAIIESCPTRIFLPNERAAEPQIAAIYERF
GLNARQIEILSRATPKRDYYCQSRRGNRLFELGLGEVALAFSAASAKADQLRIADIIETH
GQAAFAAEWLRHRGCAWAIELLPPSQQELPL
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgatgagcttgcgcgaatatcgcagcaaagccgcgcaccttgcggacttcctgccctgg
gccgcgttggtcggcgaaggcgtcgtgctcaacaaggacgggtcgttccagcgcactgca
cgcttccgtggccctgatctggacagtgcgacgccggccgagctggtggcgaccacctca
cggctcaacaattcgcttcgccggctcggttcgggctgggcgatcttcgtcgaagcccag
cggacgcccgcgctggactatcccgaggatgatttccccgatcccgtgtcggcgctggtc
gatatggaacggcgcgaacagttccgtgaggaaggcgcgcatttcgagagcgcctatttc
ctgacgttgctgtggatgccgccggccgaggaagccgcgcgggccgaaggctggctatac
gagggccggtccaccaccggcgtcgatccgtgggagctgctcaaaggcttcaccgatcgc
agcgaccgcgtgctcaatttggtcgagggtttcgtgcccgaggtccgctggctcgatgac
ggcgagacgctgacctacctccattcgacgatttcgacgcggcgacagcgtgtgcgcgtg
ccggaaaccccgatgcacctcgacgcgctgctcgccgatgagccgttgaccggcgggctg
gagccttgcctgggcgaccatcatctccgcacgctcaccattaccggctttcccagctcg
acgtttccggggctgctcgacgagctgaaccggctggcgttcggctatcgctggtccacg
cgcgcgatcatgctcgacaagatcgacgcgaccaagctgcttacccgcattcgtcgccag
tggttcgccaagcgcaaatccgtcgccgccatcttgaaggaggtgatgaccaacgaggcg
agcacgctgctcgacagcgacgcctcgaacaaggccgccgacgctgacaccgccttgcag
gagctgggcgccgactatgccggcatggcctacgtcaccgccacggtgacggtatgggat
cgcgatccagccatcgcggccgagaagctgaggctcgtcgagaaggtcattcagggccgc
gacttcaccgtcatccccgagggcatgaacgcgatcgaggcgtggctgggcagccttccc
ggtcacacctacgccaatgttcgccagcccccgatttccaccatcaatctcgcccacctg
atccccctgtcagcagtatgggcggggccggaacgggacgagcatttcggtgcagccccc
ttgctctacgcaagaaccgaaggctcgaccccgttccggttttcccttcacgtcggcgat
gtcggccacacgctgatcgtcggcccgaccggcgccggcaaatcggtgctgctcgcgctg
atggcgatgcagttccgccgctacgagaacagccaggtcttcgccttcgatttcggcggc
agcatccgcgccgcggtgatcggcatgggcggcgactggcaggatctcggcgggatgctc
gccgacgaggccggcgacggcgtgcagctccagccgctcgcccgtatcgacgatccggcc
gaacgagcgtgggcggcggaatggctggcggcgatcctcgcgtccgaaggcgtcgcggtc
gatccgcaagccaaggagcatatctggtcggcgctcaattcactggcgtcggcgccggtc
agcgaacgcacgctgaccggccttgccgtgctgttgcagaaccagcagctcaaacaagcg
ctcgcctcgtattgcatcggcgggccgtggggccggcttctcgacgccgaggacgagcgc
ctgggcgaagccgccgtgcaggcgttcgagaccgaaggactggtcggcgccggctctgcc
gccgccgttttgtcctacctgttccaccggatcgacgggcggctggacggctcgccgaca
ctcatcatcatcgacgagggctggctggttctcgacagcccggacttcgcagcgcaactc
cgcgagtggctgaagaccctccggaagaagaacgcgagcgtcgtctttgccacgcagagc
cttgccgacatcgaaacgtcgagcatcgccccggccatcatcgaaagctgcccgacgcgc
atcttcctgccgaacgagcgcgccgccgagccgcagatcgccgccatctacgagcggttc
gggcttaacgcccgccagatcgaaatcctcagccgggcgacacccaagcgcgactattat
tgccagtcccggcgcggcaaccggctgttcgagttggggctgggcgaggtcgcgctggcc
ttctcagccgcgtcggccaaggccgatcagctccgcatcgccgacatcatcgaaacccac
ggccaagctgctttcgcggccgaatggctgcgccatcgcggctgcgcgtgggcgatcgag
cttcttccccccagccagcaggagttaccgctatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

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