KEGG   Rhizorhabdus dicambivorans: CMV14_20500
Entry
CMV14_20500       CDS       T05084                                 
Name
(GenBank) tyrosine--tRNA ligase
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CMV14_20500
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rdi01007]
    CMV14_20500
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rdi03016]
    CMV14_20500
   03029 Mitochondrial biogenesis [BR:rdi03029]
    CMV14_20500
Enzymes [BR:rdi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     CMV14_20500
Amino acid related enzymes [BR:rdi01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   CMV14_20500
Transfer RNA biogenesis [BR:rdi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CMV14_20500
 Prokaryotic type
    CMV14_20500
Mitochondrial biogenesis [BR:rdi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    CMV14_20500
SSDB
Motif
Pfam: tRNA-synt_1b S4_2 S4
Other DBs
NCBI-ProteinID: ATE66492
UniProt: A0A2A4FPM0
Position
4365948..4367168
AA seq 406 aa
MTEYRSDLLRLLDERGYIHQITDAEGLDKLAAAGVMPGYIGFDPTAPSLHVGSLVQIMLL
RRMQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTTEVIAGNVASIKRIFERFLTFGDGP
TDAVMVDNADWLDKLEYIPFLREVGQHFSINRMLSFDSVKLRLEREQSLSFLEFNYMILQ
AYDFMELARRRGCRLQMGGSDQWGNIVNGIELSRRMLGQEVYGVTTPLITTADGGKMGKT
MSGAVWLNEESLPAYDYWQFWRNTHDKDVGRFLRLFTDLPLDEIARLEALEGQEINQAKI
VLANEATTMCRGAEAAAAAAETARRTFEEGAAGGDLPTLATGGSISLIDALVGLGFAGSK
GEAKRKLAEGAVRIDGEAEKDDRMVMVGAANVKISLGKKKHGLLTR
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgaccgaatacagatccgacctgctacgcctgctcgacgagcggggctatatccaccag
attaccgatgcggaggggctggacaagctcgccgccgccggggtgatgccgggctatatc
ggcttcgatccgaccgcgccctcgctccatgtcggcagcctggtgcagatcatgctgctg
cgccggatgcagcaggccgggcacaagccgattgtgctgatgggcggcggcaccggcaag
atcggcgatccgagcttcaaggacgaagcccgcaagctgatgacgaccgaagtgatcgcg
ggcaatgtcgcctcgatcaaacgcatctttgaacgcttcctgaccttcggggacggcccg
accgacgcggtgatggtcgacaatgccgactggctcgacaagctcgaatatatccccttc
ctccgcgaggtgggccagcatttctcgatcaaccggatgctgagcttcgactcggtgaag
ctgcgccttgagcgtgagcaatcgctgagcttcctcgagttcaactacatgatcctccag
gcctacgacttcatggagctggcgcgccgccgcggctgccggctgcagatgggcggatcg
gaccagtggggcaatatcgtcaacggcatcgagctgtcgcgccgcatgctgggccaggaa
gtctatggcgtcaccacgccactgatcaccaccgccgacggcggcaagatgggcaagacc
atgtccggcgcggtgtggctcaacgaggagagcctgcccgcctacgactattggcaattc
tggcgaaacacccacgacaaggatgtcggccgcttcctgcgcctgttcaccgacctgccg
ctcgacgagatcgcccggctggaggcgctggagggccaggagatcaaccaggccaagatc
gtgctcgccaatgaggcgacgacgatgtgccgtggcgcggaggcggcggcagccgccgcc
gagaccgcgcggcggaccttcgaggagggtgcggccggcggcgacctgccgacgctggcg
accggcggcagcatctccctgatcgatgcgctggtcggcctgggctttgcggggtcgaag
ggcgaggccaagcgcaagctggcggaaggcgcggtacggatcgacggcgaggccgagaag
gacgaccgcatggtcatggtcggcgccgcgaacgtgaagatcagcctgggcaagaagaag
cacgggctgctgacccggtag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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