KEGG   Rhizorhabdus dicambivorans: CMV14_21170
Entry
CMV14_21170       CDS       T05084                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi00300  Lysine biosynthesis
rdi00550  Peptidoglycan biosynthesis
rdi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CMV14_21170
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CMV14_21170
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rdi01011]
    CMV14_21170
Enzymes [BR:rdi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     CMV14_21170
Peptidoglycan biosynthesis and degradation proteins [BR:rdi01011]
 Precursor biosynthesis
  Amino acid ligase
   CMV14_21170
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase fvmYukDl_N
Other DBs
NCBI-ProteinID: ATE67489
UniProt: A0A2A4G1M9
Position
4505157..4506584
AA seq 475 aa
MRLTDLLPDLASAAGDARITGFAIDHRKVAPGTVFGAFKGARFNGEDFIAQAVADGAIAV
VSAPGVSVEGAAHVADAEPRRLFARLAARYFAPFPETTVAVTGTNGKTSTVELTRQLWRM
AGFHAASIGTLGVTTADEQVSTGLTTPDIVTFLSNMAGLRKEGVSHAAFEASSHGLSQYR
TEGLPVRAAAFTNLSRDHLDYHGTMDAYFAAKLRLFTEVVDQDGAAVIWADDPRSEEVIA
AVRARGVGLLSVGTKGETIRLVERTPTALGQTLKLEVDGKTREVKLPLIGAYQAANALVS
AGLVIATGGEIDLTLANLQRVAPVRGRLERAAITKTGAPVYVDYAHTPDGLEAAITALRP
HTEGRLITLFGAGGDRDTGKRPLMGEVATRLSDRTIVTDDNPRSEDPALIRRDVMAGAPG
ATEIGGRREAIAAAIAEARAGDVVLIAGKGHEQGQIIGDRVLPFDDVTVARECAA
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgcgattgactgacctcctgcccgacctcgcttccgcagccggtgatgcccgcatcacc
ggcttcgccattgaccaccgcaaggtggcgccgggcacggtgttcggcgcgttcaaaggc
gcgcgtttcaacggagaggatttcatcgcccaggcggtggccgacggcgcgatcgcggtg
gtctccgcgcccggcgtgtcggtggagggcgcggcccatgtcgccgatgccgagccgcgc
cgcctcttcgcccggctggcggcgcgctatttcgcgcccttccccgagacgaccgtcgcc
gtcaccggcaccaacggcaagacctcaaccgtcgagctgacccgccagctgtggcggatg
gcggggttccacgccgcctcgatcggcacgctgggcgtcaccaccgccgacgagcaggtc
tcgaccgggctgaccacgcccgacatcgtcaccttcctgtcgaacatggcgggcctgcgg
aaggaaggcgtaagccatgccgccttcgaggcatcgagccacggcctgtcgcaatatcgt
accgagggcctgccggtgcgcgcggcggccttcaccaatctcagccgcgaccatctcgac
tatcacggcacgatggacgcctatttcgcggccaagctgcgcctgttcacggaggtggtg
gaccaggacggcgccgccgtcatctgggcggacgatccccggtcggaggaggtgatcgcc
gccgtgcgggcccgtggcgtcgggttgctcagcgtcggcaccaagggcgagacgatcagg
ctggtcgaacggacccccaccgcgctcggccagaccctgaagctggaggtggacggcaag
acccgcgaggtgaagctgccgctgatcggcgcctatcaggccgccaacgcgctggtttcc
gccggcctcgtcatcgcgaccggcggggagatcgacctgacccttgccaacctccagcgt
gtcgcccccgtgcgagggcggctggagcgggcggcgatcacgaagacgggcgcgccggtc
tatgtcgactacgcccacacccccgacgggctcgaagccgcgatcacggcgctgcgcccg
cacaccgaggggcggctgatcaccctgttcggcgcgggcggcgaccgcgacaccggcaag
cgcccgctgatgggcgaggtcgcgacccggctatccgaccgcacgatcgtcaccgacgac
aatccgcgcagcgaggacccggcactgatccgccgcgacgtgatggccggcgcgcccggc
gccaccgagatcggcggccgccgcgaggcgatcgccgccgccatcgccgaagcccgggcg
ggggacgtcgtgctgatcgcgggcaagggccatgaacagggccagatcatcggcgaccgg
gtgctgccgttcgacgacgtcacggtggcgcgggagtgcgcggcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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