KEGG   Rhizorhabdus dicambivorans: CMV14_22425
Entry
CMV14_22425       CDS       T05084                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMV14_22425
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rdi02044]
    CMV14_22425
Secretion system [BR:rdi02044]
 Type IV secretion system
  Trb secretion system protein
   CMV14_22425
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ATE66828
UniProt: A0A2A4FRQ3
Position
4760659..4761342
AA seq 227 aa
MFRRPSIRYGKTPEPETPYQRAAQVWDDRIGSARVQARSWRLAFFGALGLSTCLTAGIIW
QGARGSIVPWVVQVDKLGEAQAVAPADAGYTPSDPQVAFHLARFIEQVRAVPDDAIVVRQ
NWLRAYDFATDKGALALNDYARTNDPFALIGREQVGVDVTSVIRASPTSFRVAWVERRYR
DGSLAETSRWTAILTIALQTPRTPDALRKNPLGIFVNAINWSKELGS
NT seq 684 nt   +upstreamnt  +downstreamnt
atgttccgacgcccctcgatccgctacggcaagacccccgagcccgaaacgccctaccag
cgcgccgcgcaggtctgggatgaccggatcggctcggcccgcgtccaggcccgcagctgg
cggctcgccttcttcggcgcacttggtctttcgacttgccttaccgccggaatcatctgg
cagggcgcgcgcggcagcatcgtcccctgggtcgtccaggtcgacaagctcggcgaggcc
caggccgtcgcgcccgccgatgctggctacacgccgagcgacccgcaggtcgcgttccat
ctcgcacggttcatcgagcaggttcgcgccgtccccgacgacgccatcgtggtccgtcag
aattggctcagggcttacgacttcgccactgacaagggtgcgttggcgctcaatgattat
gcccggaccaacgatccgttcgcactgatcggccgagaacaggtcggggtcgatgtcacc
agcgtgatccgcgcctcgccgaccagcttccgggtggcctgggtcgagcgccgctaccgc
gacggcagcctcgccgaaaccagtcgttggaccgcgatcctgaccatcgccctccagacg
ccgcgtacccccgatgccctgcgcaagaacccgctcggcattttcgtcaacgccatcaac
tggtcgaaggaactcggatcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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