KEGG   Rothia dentocariosa: HMPREF0733_10555
Entry
HMPREF0733_10555  CDS       T01343                                 
Symbol
rnhA
Name
(GenBank) ribonuclease HI
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
rdn  Rothia dentocariosa
Pathway
rdn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:rdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HMPREF0733_10555 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rdn03032]
    HMPREF0733_10555 (rnhA)
Enzymes [BR:rdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     HMPREF0733_10555 (rnhA)
DNA replication proteins [BR:rdn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    HMPREF0733_10555 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     HMPREF0733_10555 (rnhA)
   Elongation factors (archaeal)
     HMPREF0733_10555 (rnhA)
SSDB
Motif
Pfam: RNase_H DUF4440
Other DBs
NCBI-ProteinID: ADP40013
UniProt: E3H110
Position
complement(611767..613089)
AA seq 440 aa
MQNQIIAAADGSALGNPGPAGWAWYIDENHWAAGGWEHGTNNMGEIKAVLDLFEATAHRA
ESKLLIYCDSQYVINSLTQWMPGWKKRGWKKADGKPVQNRDLLEALDAASTGRDYEMVWV
KGHAGHELNEAADARANAAAQAFKEGREPETGPGFPGSPHTAGEQSTPSTQAAQTRETEN
HAHAQDPDTLAADAHLSLEDFTETEVERARQGFDSLKLNGILKSASAIAAPDPQAVQERK
TKLAEASARAAEREAQVQQRVLAEQELAESEAEENEEFEGEEFEEAEQESNSQGSVTENA
VPEEPASAPTEIAASVPAQPDPSAPNPEDAMHAERELEMRGGSMSEPEISALLHERLVWV
TATGRSVSRADTIAYRARAFTQQGNPAKQGVQVVDDHNVLIMAAVQTARGRVNRSSLWHY
DTTAAPNGWRLRFRQETTAS
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgcagaatcagattattgcggcggctgacggctccgcgcttggtaatcccgggccagcc
ggatgggcatggtacattgacgagaaccactgggcggcagggggctgggagcacggcacc
aacaatatgggcgagatcaaggcggttctcgacctgtttgaggcgaccgcccatcgcgcc
gagagcaaacttctgatctactgcgacagccagtacgtgattaactccctcacccagtgg
atgcccgggtggaagaaacgcggctggaaaaaggccgacggtaaacccgtgcagaaccgt
gacctgctcgaagcactcgatgccgcaagcaccggcagggactacgagatggtctgggtt
aaagggcatgccgggcacgagctgaatgaggccgcagatgcccgcgcgaacgcagccgca
caggccttcaaagaggggcgagaacccgaaaccggcccgggatttcccggttcgccgcat
acagcaggtgaacagagcaccccgagcacccaagccgcccaaactcgtgaaaccgagaac
catgcccacgcccaagaccccgatactctcgctgcggatgcgcacctgagcctcgaagac
ttcaccgaaaccgaggtggaacgcgcacgccaggggttcgactccctgaaactcaacggg
attctcaagtctgcatccgccattgccgcccccgatccgcaggcggtgcaggagcggaaa
acgaaacttgccgaagcctccgcacgtgccgcagagcgcgaggcgcaggtgcagcagcga
gtgctcgccgagcaggaactcgccgaatcagaagccgaagagaacgaagaatttgaaggc
gaagagttcgaggaagccgagcaagaaagcaactctcagggaagcgtcacggaaaatgcc
gtgcccgaagagcctgcatccgcccccacggaaatcgccgcatcggtacctgcacaaccg
gatccttccgccccgaaccccgaagacgccatgcacgccgaacgtgagcttgagatgcgc
ggcgggagcatgagcgaaccggagatttctgcgctgttgcacgagcgtctggtatgggtg
accgcaaccggtcgttccgttagccgtgccgacaccattgcgtaccgtgcgcgcgccttc
acccagcagggcaaccccgccaaacagggcgtgcaggttgtcgatgatcataacgtgctc
atcatggcggcagtgcagacggcacgcgggcgagtcaaccgttcgagcctgtggcattac
gacacgacggcagccccgaacggctggcggctgcggtttaggcaagagactaccgcatcc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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