KEGG   Roseateles depolymerans: RD2015_2001
Entry
RD2015_2001       CDS       T04166                                 
Name
(GenBank) Endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rdp  Roseateles depolymerans
Pathway
rdp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RD2015_2001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rdp03400]
    RD2015_2001
Enzymes [BR:rdp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RD2015_2001
DNA repair and recombination proteins [BR:rdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RD2015_2001
 Prokaryotic type
     RD2015_2001
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH HHH_5 HHH_8 EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: ALV06477
UniProt: A0A0U3MCV2
Position
complement(2348566..2349204)
AA seq 212 aa
MNRQQIQTFFETLRRANPSPQTELEYASVFELLAAVLLSAQATDVGVNKATRRLFVVANT
PQKMLDLGEERLAEFIKTIGLYKTKARNLYATCRILVEQHGGQVPRSREALEALPGVGRK
TANVVLNVAFGEATMAVDTHIFRVSNRTGLAPGKNVLEVEQQLLARVPAEFLVDAHHWLI
LHGRYVCQARRPLCERCAVVSECDSAPLAGAR
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaaccgtcagcagatccagaccttttttgaaaccctgcgccgggccaatccgtccccg
cagacggagcttgaatacgccagcgtgtttgagctgctggccgccgtgctgctgtcggcg
caggcgaccgatgtgggcgtgaacaaggccacccggcgactcttcgtggtggccaatacg
ccgcagaagatgctggacctgggcgaagagcggctggccgagttcatcaagaccattggc
ctctacaagaccaaggcgcgcaacctgtacgccacctgccgcatcctggtggaacaacac
ggcggccaggtgccacgcagccgggaagcgctggaagccctgcccggcgtcggccgcaag
accgccaatgtggtgctcaatgtggccttcggcgaagccaccatggcggtggacacgcac
atcttccgcgtcagcaatcgcacgggcctggcgcccgggaaaaacgtcctggaagtcgag
cagcaactgctggcgcgggtgccggccgaattcctggtggatgcccaccactggctgatc
ttgcatggccgttatgtctgccaggcgcgccgcccgctgtgcgagcggtgcgcagtcgtt
tccgaatgtgacagcgcccccctggctggggcccgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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