KEGG   Roseateles depolymerans: RD2015_2955
Entry
RD2015_2955       CDS       T04166                                 
Name
(GenBank) DNA polymerase III epsilon subunit DnaQ
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rdp  Roseateles depolymerans
Pathway
rdp03030  DNA replication
rdp03430  Mismatch repair
rdp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RD2015_2955
   03430 Mismatch repair
    RD2015_2955
   03440 Homologous recombination
    RD2015_2955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rdp03032]
    RD2015_2955
   03400 DNA repair and recombination proteins [BR:rdp03400]
    RD2015_2955
Enzymes [BR:rdp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RD2015_2955
DNA replication proteins [BR:rdp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RD2015_2955
DNA repair and recombination proteins [BR:rdp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RD2015_2955
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: ALV07417
UniProt: A0A0U3MG90
Position
complement(3478907..3479653)
AA seq 248 aa
MRQIFFDTETTGLNPESGDRVVDIGCVEMVNRQLTGRHLHFYLNPERDMPEEAFRVHGLS
SEFLSDKPKFAEVVDELLDFLRGADLVIHNAAFDVGFINAELKRAKRQLLHEVVASVTDT
LLMARDMFPGKANSLDALCRRLEVDNSNRGLHGAVKDAELLAEVYIRLTRGQDSLVIDDS
DASSQRQGGELEVAAIDLSSFQLPVITATEEELALHEKVLADLDKASGGNRIWQVPQAPS
DAAATATA
NT seq 747 nt   +upstreamnt  +downstreamnt
atgagacagatcttttttgatacggaaaccacgggcctgaacccggagtccggtgaccgc
gtggtggacatcggctgtgtggagatggtgaaccggcagctgaccgggcggcatctgcac
ttctatctgaacccagagcgggacatgccggaagaagccttccgggtccacggcctgagc
agcgaattcctgtccgacaagcccaagttcgccgaggtggtggacgagctgctggacttc
ctgcgcggggcggacctggtgatccacaacgcggccttcgacgtcggcttcatcaacgcg
gaactcaagcgggccaaacgccagctgctgcatgaagtggtggccagcgtgaccgacacg
ctgctgatggcgcgggacatgttcccgggcaaggccaactcgctggacgccttgtgccgc
cggctggaggtggacaacagcaaccgtggcctgcacggcgccgtgaaggatgcggagctg
ctggccgaggtctatattcgcctgacgcggggccaggactcgctggtcatcgacgattcg
gatgcgtcttcgcagcggcagggcggtgagctggaggtggcggcgattgacctgagcagc
ttccagctgccggtgatcaccgcgactgaggaagagctggccctgcatgagaaggtgctg
gcagacctggacaaggcgagcggcggcaatcggatctggcaggtgccgcaggcgcccagt
gatgcggccgctaccgcaacggcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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