KEGG   Roseateles depolymerans: RD2015_4157
Entry
RD2015_4157       CDS       T04166                                 
Name
(GenBank) Ribonucleoside-diphosphate reductase subunit beta
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
rdp  Roseateles depolymerans
Pathway
rdp00230  Purine metabolism
rdp00240  Pyrimidine metabolism
rdp01100  Metabolic pathways
rdp01232  Nucleotide metabolism
Module
rdp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rdp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    RD2015_4157
   00240 Pyrimidine metabolism
    RD2015_4157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rdp03400]
    RD2015_4157
Enzymes [BR:rdp01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     RD2015_4157
DNA repair and recombination proteins [BR:rdp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    RD2015_4157
SSDB
Motif
Pfam: Ribonuc_red_sm PPP5 Oxygenase-NA
Other DBs
NCBI-ProteinID: ALV08606
UniProt: A0A0U3LB86
Position
complement(4832578..4834002)
AA seq 474 aa
MRVFIDVSGRRAFLEKRRGSIDEHFPADLTPAASALHAPTPRASSEAKCDADQQQGSGAE
VKKSFVFEHNTPIIRDDRKTTMLVWEEDRKPSSSAPASGAPIHAATMTPMDAARQSVASN
PASHAASADLTAPAAARRVNVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQE
VNMSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPEARQFLL
RQAFEEAIHTHAYQYIVESLGLDESEIFNAYHEVKSIRDKDEFLIPFIDAIMDPNFVTGT
PETDQTLLKSLIVFACLMEGLFFYVGFTQILALGRQNKMTGAAEQYQYILRDESMHCNFG
IDLINQIKLENPHLWTPEFRAEIKQLFEQAVELEYRYAEDTMPRGVLGLNAAMFKGYLRY
IANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFFETRVIEYQSGGALSWD
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgcgagtgttcatcgatgtttccgggcgtcgcgcgtttttggagaagcggcgcggcagc
atcgatgaacactttccggcggacctcacacccgccgcttcagcgctccatgcacccacg
ccgcgcgcctcctcggaagcgaaatgcgatgcggaccagcaacagggaagtggcgctgaa
gtcaagaagtcctttgtgtttgaacacaacactccgataatccgcgacgataggaagacc
accatgttggtttgggaagaagaccgtaaaccttcgagcagcgcgccggcctccggtgca
ccgattcacgcagcgaccatgacccccatggacgccgcgcgtcagtccgtcgcttcaaac
cctgcatcgcatgcagcgtcggcggacctcactgcacccgccgccgcccgacgtgtcaac
gtcgcggacaaacgcatcatcaatggccagaccgacgtcaaccagctcgtaccgttcaag
tacaagtgggcgtgggaaaagtacctggccacctgcgccaatcactggatgccgcaggaa
gtgaacatgtctcgcgacatcgctctctggaaggaccccaatggtctgaccgaggacgag
cgccgcatcatcaagcgcaaccttggtttcttcgtgaccgcggattcactggcggccaac
aacatcgtgctgggcacctatcgccacatcaccgcgcccgaagctcgccagttcctgctg
cgccaggccttcgaggaagcgatccacacccacgcctaccaatacatcgtggagtcgctg
ggtctggatgagagcgagatcttcaatgcctatcacgaggtgaagtcgatccgcgacaag
gatgagttcctcatccccttcatcgacgcgatcatggatcccaacttcgtcaccggcacg
ccggagacggaccagacgctgctgaagtcgctgatcgtgtttgcctgcctgatggaaggc
ctgttcttctacgtcggcttcacgcagatcctggcgctgggtcgccagaacaagatgacc
ggtgctgccgagcagtatcagtacatcctgcgcgacgaatccatgcactgcaatttcggc
attgacctgatcaatcagatcaagctggagaatccgcatctgtggacgcctgagttccgc
gccgagatcaagcagctgtttgagcaggccgtggaactggaataccgctacgccgaagac
accatgccgcgcggcgtgctgggtctgaatgcagcgatgttcaagggctacctgcgttat
atcgccaaccgtcgcgccacccagatcggtctggaggctctcttcccgaatgaagagaac
ccgttcccctggatgagcgagatgattgacttgaagaaggaacgcaacttcttcgagacc
cgcgtgatcgaataccaatcgggcggtgccctgtcctgggactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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