KEGG   Roseateles depolymerans: RD2015_4432
Entry
RD2015_4432       CDS       T04166                                 
Name
(GenBank) long-chain fatty acid--CoA ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
rdp  Roseateles depolymerans
Pathway
rdp00061  Fatty acid biosynthesis
rdp00071  Fatty acid degradation
rdp01100  Metabolic pathways
rdp01212  Fatty acid metabolism
rdp02024  Quorum sensing
Module
rdp_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RD2015_4432
   00071 Fatty acid degradation
    RD2015_4432
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RD2015_4432
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rdp01004]
    RD2015_4432
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rdp04147]
    RD2015_4432
Enzymes [BR:rdp01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RD2015_4432
Lipid biosynthesis proteins [BR:rdp01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   RD2015_4432
Exosome [BR:rdp04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RD2015_4432
  Exosomal proteins of breast cancer cells
   RD2015_4432
SSDB
Motif
Pfam: AMP-binding AMP-binding_C CARME
Other DBs
NCBI-ProteinID: ALV08873
UniProt: A0A0U3MK77
Position
5164760..5166487
AA seq 575 aa
MTAVTMTAETPTVTYADKPWLASYPQGVAAEIPLDRYGSLVELLEEAFRVHAGRDAAVCM
DQRLTFAQVDEHSRALGAWLQGRGLAKGARVAIMMPNVLQYMVTIAAILRAGYVVVNVNP
LYTPRELEHQLKDSGAEAIIVLENFAKTLSEVIERTQVRHVVLTGLGDMLGVLKGPLINF
AVRHLKKMVPEFRLPMTQGRSVTRFKQALSQGAHAQLQPVTLRADDPAFLQYTGGTTGLS
KGATLLHRNVVANILQSEAWFSPMLGKLGNRPLTIVCALPLYHIFALTACYMLGARLGMM
NLLIPNPRDIPGFVATLRNYKVNMFPAVNTLFNALANDPAFAKLDFSELVISNGGGMAVQ
QATAEKWQRITGCAVVEGYGLSETSPVATVNRLDLSSFNGSIGLPVPNTEIAIRDDAGRD
VPLGERGEICIRGPQVMAGYWNRPEETAQAIGPDGFFKTGDIGVMDEQGFTRIVDRKKDM
ILVSGFNVYPTEIEQVVNMHPGVLECAAVGVPDPHSGEAVKLFVIKKDPALAEEDLSAYC
HAQFTGYKRPKYIEFRDDLPKTNVGKILRRELRQH
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgactgctgtgaccatgactgctgaaacaccgaccgtgacctatgccgacaagccttgg
ctggcgagttatccgcaaggcgtggcggctgagattccgctggatcgctatggctcgctg
gtggagctactggaagaggcgttccgtgtgcatgctggccgggatgcggcggtgtgcatg
gaccagcggctgactttcgcgcaggtcgatgagcattcccgggcgctgggtgcctggctg
caggggcgcgggctggccaagggcgcacgggtggccatcatgatgcccaatgtgctgcag
tacatggtgaccattgccgccatcctgcgtgcggggtatgtggtggtgaacgtgaatccg
ctgtacacgccgcgggagctggagcatcaactcaaggattcgggggcggaagccatcatc
gtcctggagaattttgcgaagactttgtccgaggtcattgaacgcacgcaggtgcggcat
gtggtgctgacggggctgggcgacatgctgggcgtgctgaaagggccgctgatcaatttt
gcggttcggcatttgaagaagatggtgccggagttccggttgccgatgacacaaggtcgc
agcgtgacgcgcttcaagcaggccctgtcccagggcgcgcatgctcaactgcagccggtc
acgttgcgagccgacgatcccgcattcctccaatacaccggcggtaccaccggcctgtcc
aagggtgcgacgctgctgcatcgcaatgtggtggccaatatcctgcaaagcgaagcctgg
ttctcgccgatgctgggcaagctcggcaataggccgctcaccatcgtctgcgcgctgccg
ctgtatcacatcttcgcgctgacggcctgctacatgctgggggcgcggctggggatgatg
aacctgctgattccgaacccacgcgacattcctggcttcgttgcgaccttgcggaactac
aaggtcaatatgttcccggcggtcaacacgctgttcaacgcgctggccaatgacccggcg
tttgccaagctggatttcagcgagctggtcatctccaatggcggcggcatggcggtgcag
caggccactgccgagaaatggcagcgcatcaccgggtgcgcggtggtggaaggttatggg
ttgtcggaaacgtcaccggtggccaccgtgaatcgtctggacctcagcagtttcaacggg
tcgatcgggttgccggtgcccaataccgagattgcgatccgcgacgacgccggccgggat
gtgccgctgggggagcgcggcgagatctgcatccgcggaccgcaggtgatggcgggctat
tggaatcggccggaggaaacggcgcaggcgatcggcccggatggttttttcaagacgggc
gatatcggcgtcatggacgagcagggtttcacccgcatcgtggaccggaagaaggacatg
attctggtgagtggcttcaatgtctatccgaccgagatcgagcaggtggtgaacatgcac
cccggcgtgctggagtgtgcggcggtcggggtgccggatccccactcgggggaggcggtg
aagctgtttgtgatcaagaaggatcccgcgttggccgaggaagacctcagcgcctattgc
catgcccagttcacgggctacaaacgccccaaatacatcgagttccgggatgacctgccg
aagaccaatgtgggcaagatcctgcggcgggagctgcggcagcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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