KEGG   Rhodococcus erythropolis BG43: XU06_00340
Entry
XU06_00340        CDS       T03842                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:reb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    XU06_00340 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:reb01007]
    XU06_00340 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:reb03016]
    XU06_00340 (lysS)
Enzymes [BR:reb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     XU06_00340 (lysS)
Amino acid related enzymes [BR:reb01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   XU06_00340 (lysS)
Transfer RNA biogenesis [BR:reb03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    XU06_00340 (lysS)
 Prokaryotic type
   Other AARSs
    XU06_00340 (lysS)
SSDB
Motif
Pfam: LPG_synthase_C tRNA-synt_2_TM tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d DUF6056 DUF4203
Other DBs
NCBI-ProteinID: AKD95422
Position
complement(81028..84384)
AA seq 1118 aa
MAPLTEVSDTTAELVESPPENPRQARRFRKGRFSQVPHISGLILGVFSVLVFLWSISPVL
RHILRVPREYIDSYYFDAPDTSLSWALVVALLAAALASRKRIAWWLLTIYLALITLTNIA
STIVDKNPNNAVAAVVLLVVIGILIAARPEFYTRVRRGAGWKALGVLIGGMAVATVIGWG
LVELFPGDLPQNQRFLWALNRVTAAASVDNEVFDGHPRVFVNTVLGLLGAIALLAAVMTL
FRAQRSNNALTGNDESAIRGLIQNFGADDSLAYFATRRDKAVIFAPSGKAAITYRVEIGV
CLASGDPIGDPEAWPHAIEAWQDLASQYGWATAVMGASETGATAYKKAGLSVLQLGDEAI
LRTREFNLNGRDMRPVRQAVTRVRRHGVTVRMRRHRDIPPEDMAAVIIRADDWRDTDTER
GFSMALGRLGDHLDGDCLLVEAVMGEGTEDESVVGMLSLVPWGPNGVSLDLMRRKPTAPN
GVVELMVSELATRSDEIGVVRVSLNFAVFRSVFEEGSRIGAGPILRIWRSVLVFFSRWWQ
LEALYRSNVKYQPDWEPRFLCFEDNRELPRVGFASAIAEGFVVLPSFGRKSSQVVKHTGT
HAAVPAALVTSEGLHADGSPPDSAPSFTTNGPRRPEQVRVRMNKLAQLADEGIAAYPVAY
PPTHTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLA
EFAAEFDLGDLIEVSGTIGRSRKGELSLIAIEWRMNGKCLHPLPDKWKGLSDPETRVRQR
YLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETPILQQVHGGANAAPFLTHINAY
NLDLYLRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFKHNPEFTILEAYEAHSDYEGM
MRMCRELIQAAAVAAFGREIIMRPGPDGELVEVDISGEWPVKTMHGAVAEKLGVDVSPET
SLEDLQKLCDANEIPYQSSWDTGAIAQEMYEHLVEDYTEFPTFYTNFPTSMSPLTRPHRS
IPGVAEKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDPEAMELDEDFLQALE
HAMPPTGGLGMGVDRIVMLITGGSIRETLAFPLAKPRQ
NT seq 3357 nt   +upstreamnt  +downstreamnt
atggcaccattgaccgaggtatcggacaccactgcagagttggtggaatcgccacccgaa
aatccgcgccaggcgcggcgattccgcaaagggcggttcagccaggttccccatatctcg
ggattgatcctcggagtcttctccgtactggtgttcctgtggagcatctcgccggttctg
cggcacatcctccgcgtcccacgcgaatacatcgacagctactacttcgacgcaccggat
acgagcctgtcgtgggcgctcgtcgtcgccctgctcgccgcggccctcgcgagtcgcaag
cgcatcgcctggtggctgctgacgatctacctcgcgctgatcaccctcaccaacatcgcc
tccacgatcgtcgacaagaacccgaacaacgccgtcgccgctgtcgttttgcttgtcgtg
atcggaatcctcatcgccgcgaggcccgagttctacacacgcgtacgacgcggcgccggt
tggaaagcgctcggcgtactgatcggcggcatggctgtcgcgaccgtgatcggttggggc
cttgtcgaactcttcccgggcgacctgccgcagaaccaacgattcctctgggccctgaac
cgcgtcactgcggcggcttcggtcgacaacgaggtgttcgacggccatccacgcgtcttc
gtcaacacggtcctcggtctcctcggcgccatcgcactactcgccgcagttatgacgctc
ttccgcgcgcaacgctccaacaacgccctcaccggcaacgacgagtccgcgatccgcggg
ttgatccagaacttcggcgccgacgactccctcgcttacttcgccacccgccgcgacaag
gccgtcatcttcgcgccgagcggcaaggccgcgatcacctaccgcgtcgaaatcggcgtc
tgcctcgccagtggtgatcccatcggcgatcccgaagcgtggccgcacgccatcgaagcg
tggcaggacctggcctcgcagtacggctgggcgacagccgttatgggcgccagcgaaacc
ggggcgacggcgtacaagaaggcaggcttgagcgtcctgcaactcggcgacgaagcgatc
ctgcgcacccgcgagttcaacctcaacggacgcgacatgcgcccggtgcgccaggccgtc
acccgcgtcaggcgccacggcgtcaccgtgcggatgcgacgccatcgcgacatcccgccg
gaggacatggcggccgtcatcatccgcgcggacgactggcgtgacaccgacaccgagcgc
ggcttctccatggcgctcggccgactgggcgatcacctcgacggcgactgcctcctcgtc
gaagccgtcatgggcgaaggcacggaggacgaaagcgtcgtcggcatgctttcactcgtg
ccgtggggaccgaacggcgtttcgctcgatctgatgcgccgtaagccgacggcgcccaac
ggtgtcgtcgaattgatggtctcggagttggccacacgttcggacgagatcggcgtcgtg
cgggtctcgctcaacttcgccgtcttccgctcggtgttcgaggaaggttcgcgcatcggc
gccggccctatcctccgcatctggcgctcggtgctcgtcttcttctcccgctggtggcag
ctcgaggctctgtaccgctccaacgtgaagtaccagccggattgggagcctcgttttctc
tgcttcgaggacaaccgcgagcttccacgcgtcggattcgcgtcggccatcgccgaaggc
tttgtggttctgcccagtttcgggcgcaagtcgagtcaggtcgtcaagcacaccggaaca
catgcggcggtgccggcagctctggtgacttccgaaggactgcacgccgacggcagcccg
ccggactcggcgccgtcgttcacgaccaacggtccgcgtcgacccgagcaggttcgggtg
cgcatgaacaagctcgcgcaactcgccgacgaagggatcgccgcctaccccgtcgcctat
ccgccgacccacacgattgccgccgcagcgaagtcgccggagggcacccgcgtacgcatc
gcgggacgcctgctgagggttcgcgactacggcggagtcgtgttcacggacgtgcgcgac
tggtccggcgacatccaggtcctggtcgaccaggacaacgtcggccgggagaagctggcg
gagttcgccgccgagttcgatctcggcgacctgatcgaagtgagcggaaccatcgggcgt
agccgcaagggcgagctgtcgctcatcgccatcgagtggcgcatgaacggcaagtgcctg
cacccgctgccggacaagtggaagggcctctcggatcccgagacccgagtccgccagcgg
tacctcgacatcgccctcaacccgaaggcccgcgaactgctcgaagctcgaagcgccgtc
gtgaagtcgctgcgcgattcactcggtggtcgcggatacctcgaagtcgagaccccgatc
ctgcagcaggtgcacggcggcgcgaacgccgctccgttcctgacgcacatcaacgcgtac
aacctcgacctctatctccggatcgcacccgagctgtacctgaagcggttgtgcgtcgcg
ggtatggagaaggtgttcgagatcggccgcgtgttccgcaacgagggcgtcgacttcaaa
cacaatcccgaattcacgatcctcgaggcctacgaggcgcacagcgactacgagggcatg
atgcggatgtgccgcgagctcatccaggcggcggccgtcgcagcgttcgggcgcgaaatc
atcatgcgacccggcccggacggcgaattggtcgaggtcgacatctccggcgagtggccg
gtgaagacgatgcacggcgccgtcgccgaaaagcttggtgtcgacgtctcccccgagacg
agtctcgaagacctgcagaagctgtgcgacgccaacgagatcccgtaccagtccagctgg
gataccggcgccatcgcgcaggagatgtacgagcacctggtcgaggactacacggagttc
cccacgttctacacgaacttccccacctcgatgtctccgctcacccggccgcatcgcagc
atccccggcgtcgccgagaagtgggacctcgtcgcatggggtgtcgaactgggaaccgcg
tacagcgagttgaccgaccccgtggatcagcgcaaccggctcaccgagcagtcgatgctc
gcggccggcggcgatcccgaagcgatggaattggacgaggacttcctccaagccctcgaa
cacgcgatgccgccgacgggtggtctcgggatgggcgtcgacagaatcgtcatgctgatc
acgggcggcagcatccgcgagacgctggccttccccctcgcgaaaccgcgtcagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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