KEGG   Rhodococcus erythropolis BG43: XU06_02045
Entry
XU06_02045        CDS       T03842                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb03030  DNA replication
reb03430  Mismatch repair
reb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:reb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    XU06_02045
   03430 Mismatch repair
    XU06_02045
   03440 Homologous recombination
    XU06_02045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:reb03032]
    XU06_02045
   03400 DNA repair and recombination proteins [BR:reb03400]
    XU06_02045
Enzymes [BR:reb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     XU06_02045
DNA replication proteins [BR:reb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     XU06_02045
DNA repair and recombination proteins [BR:reb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     XU06_02045
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 RuvB_N DnaX_C AAA_16 AAA_30 AAA_19 Rad17 AAA_14 Mg_chelatase ResIII nSTAND3 DUF3537
Other DBs
NCBI-ProteinID: AKD95704
Position
439060..441306
AA seq 748 aa
MALYRKYRPASFAEVVGQEHVTAPLSTALDTGRINHAYLFSGPRGCGKTSSARILARSLN
CEQGPTSTPCDVCDSCVSLGPGGTGNLDVTELDAASHGGVDDTRELRDKAFHAPAASRYR
VFIIDEAHMVTAAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLAPS
TMRGLLEKICAQEGVPVEPAVYPLVIKAGGGSPRDSLSVLDQLLAGAGEEGVTYPRALSL
LGVTDVALIDEAVDALSASDGAALFGTVDRVMDAGHDPRRFALDLLERLRDLILMQAVSD
ASERGLVDAPEAELVTMREQIQRVGPATLTRFAETVHAGLSEMRGATAPRLLLEVMCARM
LLPSASDTESAVLQRLERLEQGIPAAGVAAAAAPRAAATPAPTVPPLEPEIASKFQRPSQ
RKAEPEARPEPAAPAPAAPPVVEAPVVEPPVAAAPVVEPPTVEIVEPPVAEAPVVEAPVV
EAPVVEAPVAEAPIVEAPVVEPPAPAPVEAEELIGLAEPEPDYEPEPEYEEPAAAEAAPV
SAGPTVETLRESWNTLRNKVGERNKVLPAMLSAATVHDVRGHVVVIAHGSPVLGARVTQP
HNAAVICEVLAEMFGGTWQVEYQEGAPTAPAASSAPKAAEAASRPAAAPRFSRPSQERAA
QQPKAPQPQRGDSDDIPPPEAPDYPEDPGPAPAPEVDYEATPPPATPEDEDEMFAEAAEP
ADPTARRDPEDVAKELLKDVLGARRLES
NT seq 2247 nt   +upstreamnt  +downstreamnt
gtggccctgtaccggaagtatcgacccgcgtccttcgccgaggtggtggggcaggagcat
gtcaccgcaccgctcagcacggccctcgacaccggacgcatcaaccatgcctatctgttt
tccggcccgcgtggctgtggaaagacgtcgtcggcgcgaatcctggcgcgttcgctgaac
tgtgagcagggaccgacgtcgacgccgtgcgatgtatgcgactcatgcgtttcgcttggc
ccgggcggcacaggcaacctggacgtgacggaactcgacgccgcaagtcacggtggcgtc
gacgacacccgagaactccgagacaaggcgttccacgcccccgccgcttctcgctaccgc
gtcttcatcatcgacgaggcacacatggtgacggcggcgggcttcaacgcgctgctcaag
atcgtcgaagagccgccggagcacctcatcttcatctttgcgacgacggaaccggaaaag
gttctcccgaccatccgttcgcgtacacaccactacccgttccgcctgttggcgccgtcg
accatgcgcggactcctggaaaagatctgcgcccaggaaggcgtaccggtcgagcctgct
gtttatcccctggtcatcaaggctggcggcggttcgcctcgcgactcgttgagtgtcctc
gatcagttgctcgcgggagccggcgaagaaggtgtcacgtatccgcgggcgctctctctt
ctcggagtcaccgacgtcgcgctcatcgacgaagcagtagacgccctgtctgccagtgac
ggagccgccttgttcggcactgtcgatcgggtgatggacgccggtcacgatccacgccga
ttcgcgctcgatctcctcgaacgtctacgcgatctcattttgatgcaggcagtctccgat
gccagcgaacgagggttggtcgatgcgccggaggccgagctggtcacgatgcgtgaacag
attcagcgagtcgggccggccacgctcacccgtttcgccgaaaccgtccacgctggtctc
agtgaaatgcgtggggcgacggcgccgcggctgctgctcgaagtgatgtgcgcgagaatg
ctgcttccttcggcctccgacaccgagtcggctgtgttgcagcggctcgagcgcctggaa
caaggtattccggctgccggagtcgcggctgccgctgcccctcgcgcggcagcaacgccg
gcaccgactgtgccgccgctcgaaccggagattgcttccaagttccaacggccctcccaa
cgcaaggccgagcctgaggcacggccggaaccagccgccccggctccggcggcgccgccg
gtcgtcgaggctcctgtcgtcgaacctccggtagcggcagctcccgtggtcgagcctccc
accgtcgagatcgtggaaccgccggttgccgaagctccagtggttgaagctccggtggtt
gaagcaccagtggttgaagctccggttgccgaagctccaatagttgaagctcctgtggtt
gaaccaccggctcctgctccggtcgaagcggaagagctgatcgggcttgccgagccggaa
cccgactacgagcccgagcccgagtacgaggagccggcggctgcagaagctgcgccggtc
tcggcgggccccacagtcgagaccctccgtgaatcgtggaacaccttgcgcaacaaggtc
ggtgaacgaaacaaggttcttccggccatgctgtccgctgcgacggttcacgacgtgcgt
ggacatgttgtggtcatcgctcacggctcgccggtcctgggtgctcgtgtgacgcaaccg
cacaacgcggcggtcatctgcgaggtccttgccgagatgttcggtggcacttggcaagtc
gagtaccaagaaggtgcgcccacagcgccggcagcatcgagcgcacccaaggcggcagaa
gctgcgagccgcccggccgctgcgccccgcttctcgcgccccagtcaggagcgtgcagcg
cagcagcccaaggccccgcagccccagcgcggagattcggacgacattccgccgcctgag
gcccccgactatccggaagaccctggaccggcccctgctcctgaggtcgactacgaggca
actcctccgcctgcaacgccggaggacgaggacgagatgttcgcggaggcggctgagccc
gctgatccgactgccagacgtgatcccgaggacgttgcaaaggaactcctcaaggacgtc
ctcggggcacgccgcctcgaaagctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (27)   

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