KEGG   Rhodococcus erythropolis BG43: XU06_13550
Entry
XU06_13550        CDS       T03842                                 
Name
(GenBank) Holliday junction resolvase
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:reb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    XU06_13550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:reb03400]
    XU06_13550
Enzymes [BR:reb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     XU06_13550
DNA repair and recombination proteins [BR:reb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     XU06_13550
    RecFOR pathway proteins
     XU06_13550
SSDB
Motif
Pfam: RuvC Glyco_trans_4_4 DUF4253 AtzG-like
Other DBs
NCBI-ProteinID: AKD97638
Position
2923601..2924170
AA seq 189 aa
MRVLGVDPGLTRCGLGVVDGSNGRKVRPIAVDVVRTPPEMDLGSRLLRISDAAELWIEQY
KPEVVAIERVFAQHNVSTAMGTAQAGGVVALAAARRGIPVCFHTPSEVKAAVTGSGNADK
AQVTAMVTRILNLKTAPKPADAADALALAICHCWRAPMIERMARAEAMAAEQMRKYQAKL
AEMKKAGSR
NT seq 570 nt   +upstreamnt  +downstreamnt
gtgcgcgtgctcggagtggacccaggcttgactcgctgtgggttgggtgtggtcgacggg
agcaacggcaggaaagtgcgccccattgccgtcgacgtggtgcggaccccgcccgagatg
gacctcgggtctcggctactgcggatctccgatgcggcggaactgtggatcgagcagtac
aagccggaggtcgtcgcgatcgagcgtgtgttcgcgcagcacaacgtcagtaccgcgatg
ggcacggcgcaagcaggcggagttgtcgcgctcgctgccgccagacgcggtatcccggtg
tgtttccacacgcccagcgaggtgaaggccgccgttaccggcagcggtaacgccgacaag
gcgcaggtcaccgcgatggtgacgcgaatcctgaacttgaagacggcgccgaaaccggct
gacgccgctgacgctctggcgctcgcgatctgtcactgctggcgagcaccgatgatcgag
cgaatggcccgcgccgaggcgatggccgctgaacaaatgcgtaagtatcaggcaaaattg
gccgagatgaagaaggcaggttcacgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system