KEGG T03060: roselon

Roseibacterium elongatum: roselon_00870

Entry

roselon_00870     CDS       T03060

Name

(GenBank) A/G-specific adenine glycosylase

K03575

A/G-specific adenine glycosylase [EC:3.2.2.31]

Organism

red Roseibacterium elongatum

Pathway

red03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:red00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    roselon_00870
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:red03400]
    roselon_00870
Enzymes [BR:red01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.31  adenine glycosylase
     roselon_00870
DNA repair and recombination proteins [BR:red03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     roselon_00870
Prokaryotic type
     roselon_00870

SSDB

Motif

Pfam:

HhH-GPD NUDIX_4 HHH EndIII_4Fe-2S HHH_5

Other DBs

NCBI-ProteinID:

AHM03280

UniProt:

W8SL61

Position

844170..845213

AA seq 347 aa
MGWYDTHARDLPWRVGPTARKNGALPDPYGVWLSEVMLQQTTVAAVRDYFLRFTTLWPTV
GDLAAAEDAAVMGEWAGLGYYARARNLLKCARVVAGEFGGRFPDTEDGLRDLPGIGPYTA
AAIASIAFDRPAVVMDGNVERVMARLFAVQTPLPAAKPELKTLAARLTPADRPGCHAQAV
MDLGATICTPRNPACGICPVMTACAARKAGIAADLPTKAPKKAKPTRHGIAYLVQRVDGA
WLLETRPDKGLLGGMLGWPGSDWTEGAPTDAPPVAADWRDPGLEVRHTFTHFHLSLSLRL
ACVGLDTVPQRGEFHDLATFRPANLPTVMRKAFDLAKGAMPATSAPH

NT seq 1044 nt +upstreamnt +downstreamnt
ttgggctggtacgacacccatgcccgcgacctgccatggcgggtcggccccacggcacgg
aaaaacggcgccttgcccgacccctatggcgtctggttgtccgaggtgatgctgcaacag
accaccgttgcggcggtcagggactactttctgcgcttcacgacgctttggccgacggtc
ggcgatctggccgcggccgaggatgcggcggtgatgggcgaatgggcgggccttggatac
tacgcgcgggcgcggaacctgctgaaatgcgcgcgggtggtggccggcgagttcggcggg
cggttccccgacaccgaggacggattgcgcgacttgcccgggatcggcccctacaccgcc
gccgccatcgcctcgatcgcctttgaccggccagccgttgtgatggacggcaatgtcgaa
cgggtgatggcgcggcttttcgccgtgcaaacgcccctgcccgccgccaagcccgagctc
aagacccttgccgcgcggttgacgcccgcggatcggccggggtgtcacgcgcaggccgtg
atggaccttggcgccacgatctgcaccccgaggaacccggcctgcgggatttgcccggtg
atgacggcctgtgccgcgcgcaaggcgggcatcgccgcagacttgccgaccaaggcaccg
aagaaggccaagcccacgcgccacggcatcgcctatctggtgcagcgcgtggatggggcg
tggctattggaaacgcgacccgacaaggggctgctcggcgggatgctgggctggcccggc
agcgactggaccgagggcgcgcctacggatgcgccgcccgttgccgccgattggcgcgat
ccggggttggaggtgcgccatacctttacgcatttccacctgtccctgtcgctgcgactg
gcctgcgttgggctggacacggtgccgcaaaggggcgaattccatgaccttgccacattc
cggcccgcgaacctgcccacggtcatgcgaaaagccttcgacctcgccaagggggccatg
cccgcgacatcggcgccgcattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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