LOCUS NC_004337 4607202 bp DNA circular CON 24-AUG-2016
DEFINITION Shigella flexneri 2a str. 301 chromosome, complete genome.
ACCESSION NC_004337
VERSION NC_004337.2
DBLINK BioProject: PRJNA62907
Assembly: GCF_000006925.2
KEYWORDS RefSeq.
SOURCE Shigella flexneri 2a str. 301
ORGANISM Shigella flexneri 2a str. 301
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE 1 (bases 1 to 4607202)
AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H.,
Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D.,
Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K.,
Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y.,
Hou,Y. and Yu,J.
TITLE Genome sequence of Shigella flexneri 2a: insights into
pathogenicity through comparison with genomes of Escherichia coli
K12 and O157
JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002)
PUBMED 12384590
REFERENCE 2 (bases 1 to 4607202)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4607202)
AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B.,
Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y.,
Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y.,
Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D.
TITLE Direct Submission
JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular
Virology and Genetic Engineering, Microbial Genome Center of
Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA,
Beijing 100176, P.R.China
REMARK Sequence update by submitter
REFERENCE 4 (bases 1 to 4607202)
AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B.,
Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y.,
Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y.,
Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D.
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular
Virology and Genetic Engineering, Microbial Genome Center of
Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA,
Beijing 100176, P.R.China
REMARK Sequence update by submitter
REFERENCE 5 (bases 1 to 4607202)
AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B.,
Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y.,
Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y.,
Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D.
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular
Virology and Genetic Engineering, Microbial Genome Center of
Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA,
Beijing 100176, P.R.China
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence is identical to AE005674.
On Aug 26, 2011 this sequence version replaced NC_004337.1.
RefSeq Category: Reference Genome
CLI: Clinical Isolate
FGS: First Genome sequenced
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..4607202
/organism="Shigella flexneri 2a str. 301"
/mol_type="genomic DNA"
/strain="301"
/serotype="2a"
/db_xref="taxon:198214"
gene 190..255
/gene="thrL"
/locus_tag="SF0001"
/db_xref="GeneID:1027248"
CDS 190..255
/gene="thrL"
/locus_tag="SF0001"
/codon_start=1
/transl_table=11
/product="thr operon leader peptide"
/protein_id="NP_705961.1"
/db_xref="GeneID:1027248"
/translation="MKRISTTITTTITITTGNGAG"
gene 336..2798
/gene="thrA"
/locus_tag="SF0002"
/db_xref="GeneID:1023766"
CDS 336..2798
/gene="thrA"
/locus_tag="SF0002"
/codon_start=1
/transl_table=11
/product="bifunctional aspartokinase I/homoserine
dehydrogenase I"
/protein_id="NP_705962.2"
/db_xref="GeneID:1023766"
/translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY
LESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL
RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
LLTSVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
FLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
AGDELVKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG
KVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
NDVTAAGVFADLLRTLSWKLGV"
misc_feature 336..2795
/gene="thrA"
/locus_tag="SF0002"
/note="bifunctional aspartokinase I/homoserine
dehydrogenase I; Provisional; Region: thrA; PRK09436"
/db_xref="CDD:181856"
gene 2800..3732
/gene="thrB"
/locus_tag="SF0003"
/db_xref="GeneID:1027257"
CDS 2800..3732
/gene="thrB"
/locus_tag="SF0003"
/note="Code: E; COG: COG0083"
/codon_start=1
/transl_table=11
/product="homoserine kinase"
/protein_id="NP_705963.1"
/db_xref="GeneID:1027257"
/translation="MVKVYAPASSANMSVGFDVLGAAVAPVDGALLGDVVTVEAAETF
SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
misc_feature 2803..3723
/gene="thrB"
/locus_tag="SF0003"
/note="homoserine kinase; Region: thrB; TIGR00191"
/db_xref="CDD:129295"
gene 3733..5019
/gene="thrC"
/locus_tag="SF0004"
/db_xref="GeneID:1027287"
CDS 3733..5019
/gene="thrC"
/locus_tag="SF0004"
/note="Code: E; COG: COG0498"
/codon_start=1
/transl_table=11
/product="threonine synthase"
/protein_id="NP_705964.1"
/db_xref="GeneID:1027287"
/translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
EMLKLDFVTRNAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
TLAFKDFGGRFMAQMLTHIADDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSFGLPVKRFIAATNVN
DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
TLDLPKELAERADLPLLSHNLPADFSALRKLMMNHQ"
misc_feature 3736..5001
/gene="thrC"
/locus_tag="SF0004"
/note="Tryptophan synthase beta superfamily (fold type
II); this family of pyridoxal phosphate (PLP)-dependent
enzymes catalyzes beta-replacement and beta-elimination
reactions. This CD corresponds to
aminocyclopropane-1-carboxylate deaminase (ACCD),
tryptophan...; Region: Trp-synth-beta_II; cl00342"
/db_xref="CDD:444852"
misc_feature order(4048..4053,4138..4140,4474..4488,4789..4791,
4858..4863)
/gene="thrC"
/locus_tag="SF0004"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:107203"
misc_feature 4051..4053
/gene="thrC"
/locus_tag="SF0004"
/note="catalytic residue [active]"
/db_xref="CDD:107203"
gene 5242..5529
/locus_tag="SF0005"
/db_xref="GeneID:1027292"
CDS 5242..5529
/locus_tag="SF0005"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_705965.2"
/db_xref="GeneID:1027292"
/translation="MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWD
GGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR"
misc_feature 5305..>5436
/locus_tag="SF0005"
/note="Protein of unknown function (DUF2502); Region:
DUF2502; pfam10697"
/db_xref="CDD:431443"
gene complement(5682..6458)
/gene="yaaA"
/locus_tag="SF0006"
/db_xref="GeneID:1025603"
CDS complement(5682..6458)
/gene="yaaA"
/locus_tag="SF0006"
/note="Code: S; COG: COG3022"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_705966.1"
/db_xref="GeneID:1025603"
/translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP
QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD
FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
IIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR"
misc_feature complement(5688..6458)
/gene="yaaA"
/locus_tag="SF0006"
/note="peroxide stress protein YaaA; Region: PRK02101"
/db_xref="CDD:234999"
gene complement(6528..7958)
/gene="yaaJ"
/locus_tag="SF0007"
/pseudo
/db_xref="GeneID:1026734"
misc_feature complement(6528..7958)
/gene="yaaJ"
/locus_tag="SF0007"
/note="Similar to Escherichia coli K12 inner membrane
transport protein gi: 1786188 (477 aa). BLAST with
identity of 98% in 476 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 8074..8358
/locus_tag="SF0008"
/db_xref="GeneID:1025737"
CDS 8074..8358
/locus_tag="SF0008"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_705967.1"
/db_xref="GeneID:1025737"
/translation="MYKNGGRYQRSVRNPKQSRLAITVLSAVALTLRRDIIRADRLHP
PNKLFKEKYYHDGQIDLPSSVHHRSGRHWGHRGNEAVSTAGCHNQPFSHS"
gene 8237..9190
/gene="talB"
/locus_tag="SF0009"
/db_xref="GeneID:1027387"
CDS 8237..9190
/gene="talB"
/locus_tag="SF0009"
/note="Code: G; COG: COG0176"
/codon_start=1
/transl_table=11
/product="transaldolase B"
/protein_id="NP_705968.2"
/db_xref="GeneID:1027387"
/translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
ETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARI
TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
misc_feature 8237..9187
/gene="talB"
/locus_tag="SF0009"
/note="transaldolase B; Provisional; Region: PRK05269"
/db_xref="CDD:235381"
misc_feature order(8285..8287,8333..8335,8339..8344,8516..8518,
8522..8524,8630..8632,8696..8698,8702..8704,8762..8764,
8777..8779)
/gene="talB"
/locus_tag="SF0009"
/note="active site"
/db_xref="CDD:188644"
misc_feature order(8546..8548,9071..9073,9080..9082,9092..9097,
9113..9115,9122..9124,9134..9136)
/gene="talB"
/locus_tag="SF0009"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188644"
misc_feature 8630..8632
/gene="talB"
/locus_tag="SF0009"
/note="catalytic residue [active]"
/db_xref="CDD:188644"
gene 9305..9892
/gene="mogA"
/locus_tag="SF0010"
/db_xref="GeneID:1027511"
CDS 9305..9892
/gene="mogA"
/locus_tag="SF0010"
/note="Code: H; COG: COG0521"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein MogA"
/protein_id="NP_705969.2"
/db_xref="GeneID:1027511"
/translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET
RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFA
SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
misc_feature 9305..9883
/gene="mogA"
/locus_tag="SF0010"
/note="molybdenum cofactor biosynthesis protein MogA;
Provisional; Region: mogA; PRK09417"
/db_xref="CDD:181837"
misc_feature order(9527..9535,9623..9625,9701..9706,9716..9718,
9725..9727)
/gene="mogA"
/locus_tag="SF0010"
/note="MPT binding site [active]"
/db_xref="CDD:238451"
misc_feature order(9533..9535,9539..9544,9548..9550,9560..9562,
9584..9592,9605..9607,9614..9619,9647..9649,9656..9658,
9809..9811)
/gene="mogA"
/locus_tag="SF0010"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238451"
gene complement(9927..10493)
/gene="yaaH"
/locus_tag="SF0011"
/db_xref="GeneID:1027481"
CDS complement(9927..10493)
/gene="yaaH"
/locus_tag="SF0011"
/note="Code: R; COG: COG1584"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_705970.1"
/db_xref="GeneID:1027481"
/translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
GASAIYLAMGEVLNEQFGRTVLPIGESH"
misc_feature complement(9930..10493)
/gene="yaaH"
/locus_tag="SF0011"
/note="acetate uptake transporter; Region: PRK10659"
/db_xref="CDD:182625"
gene complement(10642..11355)
/locus_tag="SF0012"
/db_xref="GeneID:1027580"
CDS complement(10642..11355)
/locus_tag="SF0012"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_705971.1"
/db_xref="GeneID:1027580"
/translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSILM
RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKL
LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSTYRVT
IPAVLQIACLRRMVSATQV"
misc_feature complement(10645..11355)
/locus_tag="SF0012"
/note="acidic protein MsyB; Region: PRK10236"
/db_xref="CDD:182323"
gene complement(11381..11785)
/gene="yaaI"
/locus_tag="SF0013"
/db_xref="GeneID:1027581"
CDS complement(11381..11785)
/gene="yaaI"
/locus_tag="SF0013"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_705972.1"
/db_xref="GeneID:1027581"
/translation="MKSVFTISASLAISLMLCCTAQANDHKLLGVIAMPRNETNDLAL
KLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININS
DNDNKRCVSKITFSGHTVNSSDMATLKIIGDD"
misc_feature complement(11384..11785)
/gene="yaaI"
/locus_tag="SF0013"
/note="DUF2541 family protein; Region: PRK10154"
/db_xref="CDD:182272"
gene 12162..14078
/gene="dnaK"
/locus_tag="SF0014"
/db_xref="GeneID:1027578"
CDS 12162..14078
/gene="dnaK"
/locus_tag="SF0014"
/note="Code: O; COG: COG0443"
/codon_start=1
/transl_table=11
/product="molecular chaperone DnaK"
/protein_id="NP_705973.1"
/db_xref="GeneID:1027578"
/translation="MGKIIGIDLGTTNSCVAIMDGTIPRVLENAEGDRTTPSIIAYTQ
DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
DVVDAEFEEVKDKK"
misc_feature 12162..14075
/gene="dnaK"
/locus_tag="SF0014"
/note="molecular chaperone DnaK; Provisional; Region:
dnaK; PRK00290"
/db_xref="CDD:234715"
gene 14167..15297
/gene="dnaJ"
/locus_tag="SF0015"
/db_xref="GeneID:1027267"
CDS 14167..15297
/gene="dnaJ"
/locus_tag="SF0015"
/note="Code: O; COG: COG0484"
/codon_start=1
/transl_table=11
/product="molecular chaperone DnaJ"
/protein_id="NP_705974.2"
/db_xref="GeneID:1027267"
/translation="MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAE
AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF
GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
GVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETQIGLD
EKDKQLLHELHESYGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
misc_feature 14167..15282
/gene="dnaJ"
/locus_tag="SF0015"
/note="chaperone protein DnaJ; Provisional; Region:
PRK10767"
/db_xref="CDD:236757"
gene complement(15401..15553)
/locus_tag="SF0015a"
/db_xref="GeneID:16608301"
CDS complement(15401..15553)
/locus_tag="SF0015a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439227.1"
/db_xref="GeneID:16608301"
/translation="MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVF
TAYESE"
misc_feature complement(15413..15535)
/locus_tag="SF0015a"
/note="Hok/gef family; Region: HOK_GEF; pfam01848"
/db_xref="CDD:426473"
gene 16140..17306
/gene="nhaA"
/locus_tag="SF0016"
/db_xref="GeneID:1027500"
CDS 16140..17306
/gene="nhaA"
/locus_tag="SF0016"
/note="Code: P; COG: COG3004"
/codon_start=1
/transl_table=11
/product="pH-dependent sodium/proton antiporter"
/protein_id="NP_705975.1"
/db_xref="GeneID:1027500"
/translation="MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLET
PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLVLKIFLMALA
IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGIL
CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
misc_feature 16140..17303
/gene="nhaA"
/locus_tag="SF0016"
/note="sodium/proton antiporter NhaA; Region: nhaA;
PRK09561"
/db_xref="CDD:181955"
gene 17372..18271
/gene="nhaR"
/locus_tag="SF0017"
/db_xref="GeneID:1027434"
CDS 17372..18271
/gene="nhaR"
/locus_tag="SF0017"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="transcriptional activator NhaR"
/protein_id="NP_705976.2"
/db_xref="GeneID:1027434"
/translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI
LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
IQHPAVQRICNTDYSALFSPAVR"
misc_feature 17372..18259
/gene="nhaR"
/locus_tag="SF0017"
/note="transcriptional activator NhaR; Provisional;
Region: nhaR; PRK11062"
/db_xref="CDD:182938"
mobile_element complement(18669..19436)
/mobile_element_type="insertion sequence:IS1"
gene complement(18684..19079)
/gene="insB"
/locus_tag="SF0018"
/db_xref="GeneID:1027224"
CDS complement(18684..19079)
/gene="insB"
/locus_tag="SF0018"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_705977.1"
/db_xref="GeneID:1027224"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERFLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(18687..19076)
/gene="insB"
/locus_tag="SF0018"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(19106..19381)
/gene="insA"
/locus_tag="SF0019"
/db_xref="GeneID:1024591"
CDS complement(19106..19381)
/gene="insA"
/locus_tag="SF0019"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_705978.1"
/db_xref="GeneID:1024591"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<19109..19360)
/gene="insA"
/locus_tag="SF0019"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(19770..20033)
/gene="rpsT"
/locus_tag="SF0020"
/db_xref="GeneID:1023564"
CDS complement(19770..20033)
/gene="rpsT"
/locus_tag="SF0020"
/note="Code: J; COG: COG0268"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S20"
/protein_id="NP_705979.5"
/db_xref="GeneID:1023564"
/translation="MANIKSAKKRAIQSEKARKIIASRRSMMRPFIKKGDAAIEAGDK
AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
misc_feature complement(19773..20033)
/gene="rpsT"
/locus_tag="SF0020"
/note="Ribosomal protein S20 [Translation, ribosomal
structure and biogenesis]; Region: RpsT; COG0268"
/db_xref="CDD:440038"
gene 20136..20354
/locus_tag="SF0020a"
/db_xref="GeneID:16608302"
CDS 20136..20354
/locus_tag="SF0020a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439228.1"
/db_xref="GeneID:16608302"
/translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICSMAMK
SHFFLISVLNRRLTLTAVQGILGRFSLF"
gene 20362..21303
/gene="ribF"
/locus_tag="SF0021"
/db_xref="GeneID:1024592"
CDS 20362..21303
/gene="ribF"
/locus_tag="SF0021"
/note="Code: H; COG: COG0196"
/codon_start=1
/transl_table=11
/product="bifunctional riboflavin kinase/FMN
adenylyltransferase"
/protein_id="NP_705980.1"
/db_xref="GeneID:1024592"
/translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
misc_feature 20365..21288
/gene="ribF"
/locus_tag="SF0021"
/note="bifunctional riboflavin kinase/FAD synthetase;
Region: PRK05627"
/db_xref="CDD:235536"
gene 21346..24162
/gene="ileS"
/locus_tag="SF0022"
/db_xref="GeneID:1024586"
CDS 21346..24162
/gene="ileS"
/locus_tag="SF0022"
/note="Code: J; COG: COG0060"
/codon_start=1
/transl_table=11
/product="isoleucyl-tRNA synthetase"
/protein_id="NP_705981.1"
/db_xref="GeneID:1024586"
/translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
QDALKAKFGVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA
LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWLPDWGQA
RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH
RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALG
DELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV
AEHAEICGRCVSNVAGDGEKRKFA"
misc_feature 21355..24135
/gene="ileS"
/locus_tag="SF0022"
/note="Isoleucyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: IleS; COG0060"
/db_xref="CDD:439830"
gene 24162..24656
/gene="lspA"
/locus_tag="SF0023"
/db_xref="GeneID:1024585"
CDS 24162..24656
/gene="lspA"
/locus_tag="SF0023"
/note="Code: N; COG: COG0597"
/codon_start=1
/transl_table=11
/product="lipoprotein signal peptidase"
/protein_id="NP_705982.1"
/db_xref="GeneID:1024585"
/translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVLLAVMMYRSKATQKLNNIAYA
LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSK
AKKQ"
misc_feature 24162..24653
/gene="lspA"
/locus_tag="SF0023"
/note="lipoprotein signal peptidase; Region: lspA;
TIGR00077"
/db_xref="CDD:272893"
gene complement(24749..25198)
/gene="slpA"
/locus_tag="SF0024"
/db_xref="GeneID:1025951"
CDS complement(24749..25198)
/gene="slpA"
/locus_tag="SF0024"
/note="Code: O; COG: COG1047"
/codon_start=1
/transl_table=11
/product="FKBP-type peptidylprolyl isomerase"
/protein_id="NP_705983.1"
/db_xref="GeneID:1025951"
/translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
misc_feature complement(24752..25198)
/gene="slpA"
/locus_tag="SF0024"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Provisional; Region: PRK15095"
/db_xref="CDD:237908"
gene 25256..25705
/gene="slpA"
/locus_tag="SF0025"
/db_xref="GeneID:1024588"
CDS 25256..25705
/gene="slpA"
/locus_tag="SF0025"
/note="Code: O; COG: COG1047"
/codon_start=1
/transl_table=11
/product="FKBP-type peptidylprolyl isomerase"
/protein_id="NP_705984.1"
/db_xref="GeneID:1024588"
/translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
misc_feature 25256..25702
/gene="slpA"
/locus_tag="SF0025"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Provisional; Region: PRK15095"
/db_xref="CDD:237908"
gene 25707..26657
/gene="ispH"
/locus_tag="SF0026"
/db_xref="GeneID:1024589"
CDS 25707..26657
/gene="ispH"
/locus_tag="SF0026"
/note="Code: IM; COG: COG0761"
/codon_start=1
/transl_table=11
/product="4-hydroxy-3-methylbut-2-enyl diphosphate
reductase"
/protein_id="NP_705985.2"
/db_xref="GeneID:1024589"
/translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
VVGSKNSSNSNRLAELAQRMGKHAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
misc_feature 25707..26609
/gene="ispH"
/locus_tag="SF0026"
/note="4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
Reviewed; Region: ispH; PRK01045"
/db_xref="CDD:234893"
misc_feature order(25740..25742,25992..25994,26295..26297)
/gene="ispH"
/locus_tag="SF0026"
/note="Fe-S cluster binding site [ion binding]; other
site"
/db_xref="CDD:260116"
misc_feature order(25749..25751,25824..25829,25923..25928,26076..26078,
26082..26084,26205..26210,26376..26387,26511..26513)
/gene="ispH"
/locus_tag="SF0026"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:260116"
misc_feature order(26076..26078,26082..26084,26379..26381,26385..26387)
/gene="ispH"
/locus_tag="SF0026"
/note="catalytic site [active]"
/db_xref="CDD:260116"
gene 26723..27637
/gene="yaaF"
/locus_tag="SF0027"
/db_xref="GeneID:1024590"
CDS 26723..27637
/gene="yaaF"
/locus_tag="SF0027"
/note="Code: F; COG: COG1957"
/codon_start=1
/transl_table=11
/product="ribonucleoside hydrolase RihC"
/protein_id="NP_705986.1"
/db_xref="GeneID:1024590"
/translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP
AFLAIRDALMRAPEPVTLVAIGPLTNIALLLLQCPECKPYIRRLVIMGGSAGRGNCTP
NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALF
SHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLG
KPANVQVALDLNVKGFQQWVAEVLALVP"
misc_feature 26723..27634
/gene="yaaF"
/locus_tag="SF0027"
/note="ribonucleoside hydrolase RihC; Provisional; Region:
PRK10768"
/db_xref="CDD:182713"
misc_feature order(26750..26752,26762..26767,26837..26839,26960..26962,
27089..27091,27191..27193,27209..27211,27215..27217,
27422..27424)
/gene="yaaF"
/locus_tag="SF0027"
/note="active site"
/db_xref="CDD:239117"
misc_feature order(26930..26932,27122..27124,27245..27247,27491..27493,
27497..27502,27509..27511)
/gene="yaaF"
/locus_tag="SF0027"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:239117"
gene 27804..28625
/gene="dapB"
/locus_tag="SF0028"
/db_xref="GeneID:1024579"
CDS 27804..28625
/gene="dapB"
/locus_tag="SF0028"
/note="Code: E; COG: COG0289"
/codon_start=1
/transl_table=11
/product="4-hydroxy-tetrahydrodipicolinate reductase"
/protein_id="NP_705987.1"
/db_xref="GeneID:1024579"
/translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
LGSDAGELAGAGKTGVTVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG
TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG
EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL"
misc_feature 27816..28610
/gene="dapB"
/locus_tag="SF0028"
/note="4-hydroxy-tetrahydrodipicolinate reductase; Region:
dapB; TIGR00036"
/db_xref="CDD:129147"
gene 29081..30229
/gene="carA"
/locus_tag="SF0029"
/db_xref="GeneID:1024582"
CDS 29081..30229
/gene="carA"
/locus_tag="SF0029"
/note="Code: EF; COG: COG0505"
/codon_start=1
/transl_table=11
/product="carbamoyl phosphate synthase small subunit"
/protein_id="NP_705988.2"
/db_xref="GeneID:1024582"
/translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
GTLQGIHRIDKPAFSFQGHPEASPGPHDAAPLFDHFIKLIEQYRKTAK"
misc_feature 29081..30205
/gene="carA"
/locus_tag="SF0029"
/note="Carbamoylphosphate synthase small subunit [Amino
acid transport and metabolism, Nucleotide transport and
metabolism]; Region: CarA; COG0505"
/db_xref="CDD:440271"
gene 30247..33468
/gene="carB"
/locus_tag="SF0030"
/db_xref="GeneID:1027515"
CDS 30247..33468
/gene="carB"
/locus_tag="SF0030"
/note="Code: EF; COG: COG0458"
/codon_start=1
/transl_table=11
/product="carbamoyl phosphate synthase large subunit"
/protein_id="NP_705989.1"
/db_xref="GeneID:1027515"
/translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM
EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV
REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
DRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK"
misc_feature 30247..33453
/gene="carB"
/locus_tag="SF0030"
/note="carbamoyl-phosphate synthase large subunit; Region:
carB; PRK05294"
/db_xref="CDD:235393"
gene 33730..34125
/gene="caiF"
/locus_tag="SF0031"
/db_xref="GeneID:1024584"
CDS 33730..34125
/gene="caiF"
/locus_tag="SF0031"
/note="of cai operon"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="NP_705990.4"
/db_xref="GeneID:1024584"
/translation="MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNT
LTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVR
KTPRIPAVPLTELNREQKWQMMLSKSMRR"
misc_feature 33784..34122
/gene="caiF"
/locus_tag="SF0031"
/note="carnitine metabolism transcriptional regulator
CaiF; Region: PRK11476"
/db_xref="CDD:183154"
gene complement(34211..34822)
/gene="caiE"
/locus_tag="SF0032"
/db_xref="GeneID:1024558"
CDS complement(34211..34822)
/gene="caiE"
/locus_tag="SF0032"
/note="Code: R; COG: COG0663"
/codon_start=1
/transl_table=11
/product="carnitine operon protein CaiE"
/protein_id="NP_705991.1"
/db_xref="GeneID:1024558"
/translation="MERTLTTVSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYI
GPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDA
LVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKR
LNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR"
misc_feature complement(34214..34801)
/gene="caiE"
/locus_tag="SF0032"
/note="carnitine operon protein CaiE; Provisional; Region:
PRK13627"
/db_xref="CDD:184189"
gene complement(34807..35700)
/gene="caiD"
/locus_tag="SF0033"
/db_xref="GeneID:1024587"
CDS complement(34807..35700)
/gene="caiD"
/locus_tag="SF0033"
/note="Code: I; COG: COG1024"
/codon_start=1
/transl_table=11
/product="carnitinyl-CoA dehydratase"
/protein_id="NP_705992.1"
/db_xref="GeneID:1024587"
/translation="MKRQGTTLPANNHALKQYAFFAGMLSSLKKQKWRKGMSESLHLT
RNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDL
KAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADN
ASFALPEAKLGIVPDSGGVLRLPKILPPTIVNEMVMTGRRMGAEEALRWGIVNRVVSQ
AELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHS
EDAIEGPLAFAEKRDPVWKGR"
misc_feature complement(34810..35592)
/gene="caiD"
/locus_tag="SF0033"
/note="crotonobetainyl-CoA hydratase; Region: PRK03580"
/db_xref="CDD:179599"
misc_feature complement(order(35191..35193,35200..35205,35269..35277,
35281..35283,35395..35409,35419..35421,35518..35520,
35524..35526))
/gene="caiD"
/locus_tag="SF0033"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature complement(order(35269..35271,35401..35403))
/gene="caiD"
/locus_tag="SF0033"
/note="oxyanion hole (OAH) forming residues [active]"
/db_xref="CDD:119339"
misc_feature complement(order(35005..35010,35017..35019,35062..35064,
35071..35073,35104..35106,35113..35118,35122..35127,
35131..35136,35149..35154,35158..35166,35170..35172,
35188..35199,35233..35244,35305..35307,35329..35331))
/gene="caiD"
/locus_tag="SF0033"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene complement(35701..37269)
/gene="caiC"
/locus_tag="SF0034"
/db_xref="GeneID:1024583"
CDS complement(35701..37269)
/gene="caiC"
/locus_tag="SF0034"
/note="Code: IQ; COG: COG0318"
/codon_start=1
/transl_table=11
/product="crotonobetaine/carnitine-CoA ligase"
/protein_id="NP_705993.1"
/db_xref="GeneID:1024583"
/translation="MDRGAMDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYS
YLELNQEINRTANLFYTLGIRKGNKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL
REESEWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQ
LKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRD
DDVYMTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQAQKYRATITECIPM
MIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGII
GDRPSDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNP
KATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPK
IQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDL
PRNCSGKIIRKNLK"
misc_feature complement(35704..37254)
/gene="caiC"
/locus_tag="SF0034"
/note="putative crotonobetaine/carnitine-CoA ligase;
Validated; Region: caiC; PRK08008"
/db_xref="CDD:181195"
gene complement(37328..38545)
/gene="caiB"
/locus_tag="SF0035"
/db_xref="GeneID:1024543"
CDS complement(37328..38545)
/gene="caiB"
/locus_tag="SF0035"
/note="Code: C; COG: COG1804"
/codon_start=1
/transl_table=11
/product="crotonobetainyl-CoA:carnitine CoA-transferase"
/protein_id="NP_705994.1"
/db_xref="GeneID:1024543"
/translation="MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIE
NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA
RRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP
MPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG
GEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPE
GTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQY
VARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDI
QELVSKGLAKVED"
misc_feature complement(37331..38545)
/gene="caiB"
/locus_tag="SF0035"
/note="L-carnitine CoA-transferase; Region: PRK03525"
/db_xref="CDD:179589"
gene complement(38674..39816)
/gene="caiA"
/locus_tag="SF0036"
/db_xref="GeneID:1024569"
CDS complement(38674..39816)
/gene="caiA"
/locus_tag="SF0036"
/note="Code: I; COG: COG1960"
/codon_start=1
/transl_table=11
/product="crotonobetainyl-CoA dehydrogenase"
/protein_id="NP_705995.1"
/db_xref="GeneID:1024569"
/translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK
ALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT
QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSA
YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELD
EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRF
QLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ
VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR"
misc_feature complement(38677..39816)
/gene="caiA"
/locus_tag="SF0036"
/note="crotonobetainyl-CoA dehydrogenase; Validated;
Region: PRK03354"
/db_xref="CDD:179566"
gene complement(39847..41361)
/gene="caiT"
/locus_tag="SF0037"
/db_xref="GeneID:1024556"
CDS complement(39847..41361)
/gene="caiT"
/locus_tag="SF0037"
/note="Code: M; COG: COG1292"
/codon_start=1
/transl_table=11
/product="L-carnitine/gamma-butyrobetaine antiporter"
/protein_id="NP_705996.1"
/db_xref="GeneID:1024556"
/translation="MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVF
SYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSA
AVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYF
FFVRKMEVIRPSSTLVPLAGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC
MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV
SGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIF
LARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLLLMDKNIINIPNLIEQYGVAR
AIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRI
GWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD"
misc_feature complement(39850..41361)
/gene="caiT"
/locus_tag="SF0037"
/note="L-carnitine/gamma-butyrobetaine antiport BCCT
transporter; Region: PRK03356"
/db_xref="CDD:179568"
gene 41681..42487
/gene="fixA"
/locus_tag="SF0038"
/db_xref="GeneID:1024559"
CDS 41681..42487
/gene="fixA"
/locus_tag="SF0038"
/note="Code: C; COG: COG2086"
/codon_start=1
/transl_table=11
/product="flavoprotein subunit"
/protein_id="NP_705997.4"
/db_xref="GeneID:1024559"
/translation="MNDVSFMISGDAMKIITCYKCVPDEQDIAVNNADGSLDFSKADA
KISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDD
QFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK
IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVW
SAADIGFNAVDAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI"
misc_feature 41717..42484
/gene="fixA"
/locus_tag="SF0038"
/note="putative electron transfer flavoprotein FixA;
Reviewed; Region: PRK03359"
/db_xref="CDD:179569"
gene 42502..43293
/locus_tag="SF0039"
/db_xref="GeneID:1025953"
CDS 42502..43293
/locus_tag="SF0039"
/note="Code: C; COG: COG2025"
/codon_start=1
/transl_table=11
/product="flavoprotein"
/protein_id="NP_705998.1"
/db_xref="GeneID:1025953"
/translation="MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQA
IQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYR
LKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDAS
RTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLC
KAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISG"
misc_feature 42502..43290
/locus_tag="SF0039"
/note="electron transfer flavoprotein subunit alpha/FixB
family protein; Region: fixB; PRK03363"
/db_xref="CDD:235120"
gene 43494..44780
/gene="fixC"
/locus_tag="SF0040"
/db_xref="GeneID:1024551"
CDS 43494..44780
/gene="fixC"
/locus_tag="SF0040"
/note="Code: C; COG: COG0644"
/codon_start=1
/transl_table=11
/product="oxidoreductase FixC"
/protein_id="NP_705999.1"
/db_xref="GeneID:1024551"
/translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN
VTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRS
YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVLLAD
GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD
GLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY
SAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSA
MKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGNPELAVGVARDLFT
IDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL"
misc_feature 43494..44777
/gene="fixC"
/locus_tag="SF0040"
/note="putative oxidoreductase FixC; Provisional; Region:
PRK10157"
/db_xref="CDD:182273"
gene 44777..45064
/gene="fixX"
/locus_tag="SF0041"
/db_xref="GeneID:1024565"
CDS 44777..45064
/gene="fixX"
/locus_tag="SF0041"
/note="Code: C; COG: COG2440"
/codon_start=1
/transl_table=11
/product="ferredoxin-like protein FixX"
/protein_id="NP_706000.1"
/db_xref="GeneID:1024565"
/translation="MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQVLELLVKACP
AGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG"
misc_feature 44777..45061
/gene="fixX"
/locus_tag="SF0041"
/note="ferredoxin-like protein FixX; Provisional; Region:
PRK15449"
/db_xref="CDD:185346"
gene 45123..46517
/gene="yaaU"
/locus_tag="SF0042"
/db_xref="GeneID:1024566"
CDS 45123..46517
/gene="yaaU"
/locus_tag="SF0042"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706001.1"
/db_xref="GeneID:1024566"
/translation="MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQL
TPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMC
VSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADL
VGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFG
EPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGSLGLG
VGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGI
WLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI
FINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMGLFVQISL
FSESILLTISRVNI"
misc_feature 45180..46376
/gene="yaaU"
/locus_tag="SF0042"
/note="Metazoan Synaptic vesicle glycoprotein 2 (SV2) and
related small molecule transporters of the Major
Facilitator Superfamily; Region: MFS_SV2_like; cd17316"
/db_xref="CDD:340874"
misc_feature order(45210..45215,45222..45227,45234..45236,45330..45332,
45480..45485,45489..45497,45504..45506,45564..45566,
45573..45578,45585..45587,45876..45878,45885..45890,
45897..45905,45912..45914,45996..45998,46008..46010,
46161..46166,46176..46178,46188..46190,46236..46238,
46245..46250,46257..46262,46269..46271)
/gene="yaaU"
/locus_tag="SF0042"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340874"
gene 46565..47095
/gene="yabF"
/locus_tag="SF0043"
/db_xref="GeneID:1027514"
CDS 46565..47095
/gene="yabF"
/locus_tag="SF0043"
/note="Code: R; COG: COG2249"
/codon_start=1
/transl_table=11
/product="glutathione-regulated potassium-efflux system
ancillary protein KefF"
/protein_id="NP_706002.1"
/db_xref="GeneID:1027514"
/translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGTALHGKHLLW
AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
RHYKQRLLEWQEAHHG"
misc_feature 46565..47092
/gene="yabF"
/locus_tag="SF0043"
/note="glutathione-regulated potassium-efflux system
oxidoreductase KefF; Region: PRK00871"
/db_xref="CDD:234852"
gene 47088..48950
/gene="kefC"
/locus_tag="SF0044"
/db_xref="GeneID:1024570"
CDS 47088..48950
/gene="kefC"
/locus_tag="SF0044"
/note="Code: P; COG: COG0475"
/codon_start=1
/transl_table=11
/product="glutathione-regulated potassium-efflux system
protein KefC"
/protein_id="NP_706003.1"
/db_xref="GeneID:1024570"
/translation="MDSHTLVQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
PLVAMIPLLAASSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
FIGVGMSIDFGTLIENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
misc_feature 47088..48947
/gene="kefC"
/locus_tag="SF0044"
/note="glutathione-regulated potassium-efflux system
protein KefC; Provisional; Region: PRK03562"
/db_xref="CDD:235131"
gene 49141..49620
/gene="folA"
/locus_tag="SF0045"
/db_xref="GeneID:1024577"
CDS 49141..49620
/gene="folA"
/locus_tag="SF0045"
/note="Code: H; COG: COG0262"
/codon_start=1
/transl_table=11
/product="dihydrofolate reductase"
/protein_id="NP_706004.2"
/db_xref="GeneID:1024577"
/translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
misc_feature 49141..49617
/gene="folA"
/locus_tag="SF0045"
/note="type 3 dihydrofolate reductase; Region: folA;
PRK10769"
/db_xref="CDD:182714"
misc_feature order(49153..49155,49204..49206,49219..49221,49309..49311,
49420..49422,49438..49440,49477..49479)
/gene="folA"
/locus_tag="SF0045"
/note="folate binding site [chemical binding]; other site"
/db_xref="CDD:238127"
misc_feature order(49159..49161,49180..49182,49270..49278,49330..49332,
49423..49434)
/gene="folA"
/locus_tag="SF0045"
/note="NADP+ binding site [chemical binding]; other site"
/db_xref="CDD:238127"
gene complement(49698..50540)
/gene="apaH"
/locus_tag="SF0046"
/db_xref="GeneID:1024575"
CDS complement(49698..50540)
/gene="apaH"
/locus_tag="SF0046"
/note="Code: T; COG: COG0639"
/codon_start=1
/transl_table=11
/product="diadenosine tetraphosphatase"
/protein_id="NP_706005.1"
/db_xref="GeneID:1024575"
/translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGSLTCLRWEDKQYFVQPSNRHKDLGE
AAAS"
misc_feature complement(49704..50540)
/gene="apaH"
/locus_tag="SF0046"
/note="bis(5'-nucleosyl)-tetraphosphatase (symmetrical);
Region: apaH; TIGR00668"
/db_xref="CDD:273208"
gene complement(50547..50924)
/gene="apaG"
/locus_tag="SF0047"
/db_xref="GeneID:1024567"
CDS complement(50547..50924)
/gene="apaG"
/locus_tag="SF0047"
/note="Code: P; COG: COG2967"
/codon_start=1
/transl_table=11
/product="CO2+/MG2+ efflux protein ApaG"
/protein_id="NP_706006.1"
/db_xref="GeneID:1024567"
/translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
DENGVPFSIDIPVFRLAVPTLIH"
misc_feature complement(50550..50924)
/gene="apaG"
/locus_tag="SF0047"
/note="CO2+/MG2+ efflux protein ApaG; Reviewed; Region:
apaG; PRK05461"
/db_xref="CDD:180098"
gene complement(50927..51748)
/gene="ksgA"
/locus_tag="SF0048"
/db_xref="GeneID:1024571"
CDS complement(50927..51748)
/gene="ksgA"
/locus_tag="SF0048"
/note="Code: J; COG: COG0030"
/codon_start=1
/transl_table=11
/product="16S ribosomal RNA methyltransferase KsgA/Dim1
family protein"
/protein_id="NP_706007.1"
/db_xref="GeneID:1024571"
/translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDIRVLSRITTEAF
NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES"
misc_feature complement(50945..51748)
/gene="ksgA"
/locus_tag="SF0048"
/note="16S rRNA A1518 and A1519 N6-dimethyltransferase
RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase
activity) [Translation, ribosomal structure and
biogenesis]; Region: RsmA; COG0030"
/db_xref="CDD:439801"
gene complement(51745..52734)
/gene="pdxA"
/locus_tag="SF0049"
/db_xref="GeneID:1024548"
CDS complement(51745..52734)
/gene="pdxA"
/locus_tag="SF0049"
/note="Code: H; COG: COG1995"
/codon_start=1
/transl_table=11
/product="4-hydroxythreonine-4-phosphate dehydrogenase"
/protein_id="NP_706008.1"
/db_xref="GeneID:1024548"
/translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
DRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLA
RACDGCLNGEFAALITGPVHKGVINDASIPFTGHTEFFEERSQAKKVVMMLATEELRV
ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
GTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
misc_feature complement(51748..52734)
/gene="pdxA"
/locus_tag="SF0049"
/note="4-hydroxythreonine-4-phosphate dehydrogenase;
Reviewed; Region: pdxA; PRK00232"
/db_xref="CDD:234696"
gene complement(52734..54020)
/gene="surA"
/locus_tag="SF0050"
/db_xref="GeneID:1024578"
CDS complement(52734..54020)
/gene="surA"
/locus_tag="SF0050"
/note="Code: O; COG: COG0760"
/codon_start=1
/transl_table=11
/product="peptidyl-prolyl cis-trans isomerase SurA"
/protein_id="NP_706009.1"
/db_xref="GeneID:1024578"
/translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA
HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS
ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
misc_feature complement(52737..53966)
/gene="surA"
/locus_tag="SF0050"
/note="peptidyl-prolyl cis-trans isomerase SurA;
Provisional; Region: PRK10770"
/db_xref="CDD:236758"
gene complement(54073..56427)
/gene="imp"
/locus_tag="SF0051"
/db_xref="GeneID:1024572"
CDS complement(54073..56427)
/gene="imp"
/locus_tag="SF0051"
/note="Code: M; COG: COG1452"
/codon_start=1
/transl_table=11
/product="LPS assembly outer membrane complex protein
LptD"
/protein_id="NP_706010.1"
/db_xref="GeneID:1024572"
/translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR
TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKV
SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
AKFLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL
EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
YDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG
GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYHYASPEYIQATLPKYYSTAEQYKNGI
SQVGAVASRPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL"
misc_feature complement(54082..56427)
/gene="imp"
/locus_tag="SF0051"
/note="LPS assembly outer membrane complex protein LptD;
Provisional; Region: PRK03761"
/db_xref="CDD:235158"
gene 56682..57497
/gene="djlA"
/locus_tag="SF0052"
/db_xref="GeneID:1024576"
CDS 56682..57497
/gene="djlA"
/locus_tag="SF0052"
/note="Code: O; COG: COG1076"
/codon_start=1
/transl_table=11
/product="Dna-J like membrane chaperone protein"
/protein_id="NP_706011.2"
/db_xref="GeneID:1024576"
/translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR
VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE
LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
misc_feature 56682..57494
/gene="djlA"
/locus_tag="SF0052"
/note="co-chaperone DjlA; Region: djlA; PRK09430"
/db_xref="CDD:236512"
gene complement(57645..58331)
/gene="yabO"
/locus_tag="SF0053"
/db_xref="GeneID:1024562"
CDS complement(57645..58331)
/gene="yabO"
/locus_tag="SF0053"
/note="Code: J; COG: COG0564"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706012.1"
/db_xref="GeneID:1024562"
/translation="MASGCPAFDRCNASVTEPKMGMENYNPPQEPWLVILYQDDHIMV
VNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAEREL
KRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEV
VEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARADGTAFVATCRD
VDDYPSGVWQ"
misc_feature complement(57711..58274)
/gene="yabO"
/locus_tag="SF0053"
/note="Pseudouridine synthases catalyze the isomerization
of specific uridines in an RNA molecule to pseudouridines
(5-ribosyluracil, psi); Region: PseudoU_synth; cl00130"
/db_xref="CDD:469624"
misc_feature complement(order(57780..57782,58083..58094))
/gene="yabO"
/locus_tag="SF0053"
/note="active site"
/db_xref="CDD:211346"
gene complement(58286..61192)
/gene="hepA"
/locus_tag="SF0054"
/db_xref="GeneID:1024561"
CDS complement(58286..61192)
/gene="hepA"
/locus_tag="SF0054"
/note="Code: KL; COG: COG0553"
/codon_start=1
/transl_table=11
/product="ATP-dependent helicase HepA"
/protein_id="NP_706013.1"
/db_xref="GeneID:1024561"
/translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN
RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKSCREQHEALKAQLE
QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL
TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ"
misc_feature complement(58295..61189)
/gene="hepA"
/locus_tag="SF0054"
/note="RNA polymerase-associated protein RapA; Region:
PRK04914"
/db_xref="CDD:235319"
gene complement(61357..63708)
/gene="polB"
/locus_tag="SF0055"
/db_xref="GeneID:1024581"
CDS complement(61357..63708)
/gene="polB"
/locus_tag="SF0055"
/note="Code: L; COG: COG0417"
/codon_start=1
/transl_table=11
/product="DNA polymerase II"
/protein_id="NP_706014.1"
/db_xref="GeneID:1024581"
/translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
IHADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPD
VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID
GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
TEGFLDAWFSREKHCLPEIVTNIWHGRDKAKRQGNKPLSQALKIIMNAFYGVLGTTAC
RFFDPRLASSITMRGHQIMRQTKALIEAQGYDIIYGDTDSTFVWLKGAHSEEEAAKIG
RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG
DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRQTIDKLMAGELDARL
VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
misc_feature complement(61360..63708)
/gene="polB"
/locus_tag="SF0055"
/note="DNA polymerase II; Reviewed; Region: PRK05762"
/db_xref="CDD:235595"
gene complement(63783..64478)
/gene="araD"
/locus_tag="SF0056"
/db_xref="GeneID:1024568"
CDS complement(63783..64478)
/gene="araD"
/locus_tag="SF0056"
/note="Code: G; COG: COG0235"
/codon_start=1
/transl_table=11
/product="L-ribulose-5-phosphate 4-epimerase"
/protein_id="NP_706015.1"
/db_xref="GeneID:1024568"
/translation="MLKDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS
GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT
IWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA
AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH
YLRKHGAKAYYGQ"
misc_feature complement(63786..64478)
/gene="araD"
/locus_tag="SF0056"
/note="L-ribulose-5-phosphate 4-epimerase AraD; Region:
araD; PRK08193"
/db_xref="CDD:236181"
misc_feature complement(order(63822..63824,63882..63884,63903..63905,
63915..63917,63936..63938,63969..63971,64086..64088,
64128..64133,64137..64139,64158..64166,64179..64184,
64188..64190,64329..64334,64338..64340,64410..64412,
64434..64436,64446..64448))
/gene="araD"
/locus_tag="SF0056"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:238232"
misc_feature complement(order(63966..63968,64188..64190,64194..64196,
64251..64259,64344..64349,64395..64397))
/gene="araD"
/locus_tag="SF0056"
/note="active site"
/db_xref="CDD:238232"
misc_feature complement(order(63966..63968,64188..64190,64194..64196))
/gene="araD"
/locus_tag="SF0056"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:238232"
gene complement(64678..66175)
/gene="araA"
/locus_tag="SF0057"
/pseudo
/db_xref="GeneID:1025954"
misc_feature complement(64678..66175)
/gene="araA"
/locus_tag="SF0057"
/note="Similar to Escherichia coli K12 L-arabinose
isomerase gi: 1786248 (501 aa). BLAST with identity of 98%
in 499 aa. This CDS contains an in-frame stop codon. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(66190..67890)
/gene="araB"
/locus_tag="SF0058"
/db_xref="GeneID:1024532"
CDS complement(66190..67890)
/gene="araB"
/locus_tag="SF0058"
/note="Code: C; COG: COG1069"
/codon_start=1
/transl_table=11
/product="ribulokinase"
/protein_id="NP_706016.1"
/db_xref="GeneID:1024532"
/translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL
ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
VVLDWFNGRRTPNANQRLKGVITDLNLATDTPLLFGGLIAATAFGARAIMECFTDQGI
AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
SAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL
"
misc_feature complement(66232..67890)
/gene="araB"
/locus_tag="SF0058"
/note="ribulokinase; Provisional; Region: PRK04123"
/db_xref="CDD:235221"
gene 68229..69107
/gene="araC"
/locus_tag="SF0059"
/db_xref="GeneID:1024542"
CDS 68229..69107
/gene="araC"
/locus_tag="SF0059"
/note="Code: K; COG: COG2207"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator AraC"
/protein_id="NP_706017.2"
/db_xref="GeneID:1024542"
/translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGCHPEAREWYHQWVYFRPRA
YWHEWLNWPSIFANTGFFRPDEAHQPYFSDLFGQIINAGQGEGRYSELLAMNLLEQLL
LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ
LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
RAGCEEKVNDVAVKLS"
misc_feature 68229..69083
/gene="araC"
/locus_tag="SF0059"
/note="arabinose operon transcriptional regulator AraC;
Region: PRK10572"
/db_xref="CDD:236717"
gene 69193..69957
/gene="yabI"
/locus_tag="SF0060"
/db_xref="GeneID:1024574"
CDS 69193..69957
/gene="yabI"
/locus_tag="SF0060"
/note="Code: S; COG: COG0586"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706018.1"
/db_xref="GeneID:1024574"
/translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI
LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV"
misc_feature 69193..69804
/gene="yabI"
/locus_tag="SF0060"
/note="Membrane integrity protein DedA, putative
transporter, DedA/Tvp38 family [Cell
wall/membrane/envelope biogenesis]; Region: DedA; COG0586"
/db_xref="CDD:440351"
gene complement(70071..70769)
/gene="thiQ"
/locus_tag="SF0061"
/db_xref="GeneID:1024580"
CDS complement(70071..70769)
/gene="thiQ"
/locus_tag="SF0061"
/note="Code: G; COG: COG1130"
/codon_start=1
/transl_table=11
/product="thiamine ABC transporter ATP-binding subunit"
/protein_id="NP_706019.2"
/db_xref="GeneID:1024580"
/translation="MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL
NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEEVL
SGKGSASAIWGIQG"
misc_feature complement(70080..70769)
/gene="thiQ"
/locus_tag="SF0061"
/note="thiamine ABC transporter ATP-binding protein ThiQ;
Region: thiQ; PRK10771"
/db_xref="CDD:182716"
misc_feature complement(70653..70676)
/gene="thiQ"
/locus_tag="SF0061"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213265"
misc_feature complement(order(70206..70208,70305..70310,70536..70538,
70650..70658,70662..70667))
/gene="thiQ"
/locus_tag="SF0061"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213265"
misc_feature complement(70536..70547)
/gene="thiQ"
/locus_tag="SF0061"
/note="Q-loop/lid; other site"
/db_xref="CDD:213265"
misc_feature complement(70353..70382)
/gene="thiQ"
/locus_tag="SF0061"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213265"
misc_feature complement(70305..70322)
/gene="thiQ"
/locus_tag="SF0061"
/note="Walker B; other site"
/db_xref="CDD:213265"
misc_feature complement(70287..70298)
/gene="thiQ"
/locus_tag="SF0061"
/note="D-loop; other site"
/db_xref="CDD:213265"
misc_feature complement(70200..70220)
/gene="thiQ"
/locus_tag="SF0061"
/note="H-loop/switch region; other site"
/db_xref="CDD:213265"
gene complement(70753..72363)
/gene="thiP"
/locus_tag="SF0062"
/db_xref="GeneID:1024545"
CDS complement(70753..72363)
/gene="thiP"
/locus_tag="SF0062"
/note="Code: H; COG: COG1178"
/codon_start=1
/transl_table=11
/product="thiamine ABC transporter permease"
/protein_id="NP_706020.1"
/db_xref="GeneID:1024545"
/translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
ALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
GGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQ
GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
LLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
VTALILLLLCFLLFTVIEKLPGRNVKTD"
misc_feature complement(70759..72333)
/gene="thiP"
/locus_tag="SF0062"
/note="thiamine transporter membrane protein; Reviewed;
Region: thiP; PRK09433"
/db_xref="CDD:181853"
gene complement(72339..73322)
/gene="tbpA"
/locus_tag="SF0063"
/db_xref="GeneID:1024573"
CDS complement(72339..73322)
/gene="tbpA"
/locus_tag="SF0063"
/note="Code: H; COG: COG1840"
/codon_start=1
/transl_table=11
/product="thiamine ABC transporter substrate-binding
subunit"
/protein_id="NP_706021.2"
/db_xref="GeneID:1024573"
/translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
EANCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR"
misc_feature complement(72342..73268)
/gene="tbpA"
/locus_tag="SF0063"
/note="thiamine ABC transporter, periplasmic binding
protein; Region: thiB; TIGR01276"
/db_xref="CDD:130343"
misc_feature complement(order(72669..72674,72678..72680,72729..72737,
72834..72839))
/gene="tbpA"
/locus_tag="SF0063"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270263"
gene complement(73486..75141)
/gene="yabN"
/locus_tag="SF0064"
/db_xref="GeneID:1024539"
CDS complement(73486..75141)
/gene="yabN"
/locus_tag="SF0064"
/note="Code: EP; COG: COG0747"
/codon_start=1
/transl_table=11
/product="transcriptional regulator SgrR"
/protein_id="NP_706022.2"
/db_xref="GeneID:1024539"
/translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE
NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIT
DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPCEWETLSNFASHPIGTGPYAVIRN
STNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEKKEIESRLEEG
CYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART
IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES
DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA
SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
misc_feature complement(73489..75141)
/gene="yabN"
/locus_tag="SF0064"
/note="HTH-type transcriptional regulator SgrR; Region:
PRK13626"
/db_xref="CDD:184188"
gene 75463..76641
/gene="yabM"
/locus_tag="SF0065"
/db_xref="GeneID:1024538"
CDS 75463..76641
/gene="yabM"
/locus_tag="SF0065"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706023.1"
/db_xref="GeneID:1024538"
/translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV
GAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRH
YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPL
AFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLLSVARVELPSENALSMQGDWQDSNVR
MLFVASTLMWTCNTMYIIDMPLWISSDLGLPDKLAGFLMGTAAGLEIPAMILAGYYVK
RYGKRRMMVIAVVAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMP
GRAGAATTLFTNTISTGVILAGVIQGAIAQSWGHFAVYWVIAIISVVALFLTAKVKDV
"
misc_feature 75511..76635
/gene="yabM"
/locus_tag="SF0065"
/note="sugar efflux transporter; Region: 2A0120;
TIGR00899"
/db_xref="CDD:129977"
gene complement(76690..77295)
/gene="leuD"
/locus_tag="SF0066"
/db_xref="GeneID:1024536"
CDS complement(76690..77295)
/gene="leuD"
/locus_tag="SF0066"
/note="Code: E; COG: COG0066"
/codon_start=1
/transl_table=11
/product="3-isopropylmalate dehydratase small subunit"
/protein_id="NP_706024.1"
/db_xref="GeneID:1024536"
/translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
RFTIDAFRRHCMMNGLDSIGLTLQHDDAIASYEAKQPAFMN"
misc_feature complement(76696..77289)
/gene="leuD"
/locus_tag="SF0066"
/note="3-isopropylmalate dehydratase small subunit;
Region: leuD; PRK01641"
/db_xref="CDD:179314"
misc_feature complement(77038..77046)
/gene="leuD"
/locus_tag="SF0066"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238809"
gene complement(77306..78706)
/gene="leuC"
/locus_tag="SF0067"
/db_xref="GeneID:1024527"
CDS complement(77306..78706)
/gene="leuC"
/locus_tag="SF0067"
/note="Code: E; COG: COG0065"
/codon_start=1
/transl_table=11
/product="isopropylmalate isomerase large subunit"
/protein_id="NP_706025.1"
/db_xref="GeneID:1024527"
/translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
LCNMAIEMGAKAALVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD
KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
AAAAVTGHFADIRNIK"
misc_feature complement(77309..78706)
/gene="leuC"
/locus_tag="SF0067"
/note="3-isopropylmalate dehydratase large subunit;
Region: PRK05478"
/db_xref="CDD:235490"
misc_feature complement(order(77402..77404,77417..77419,77474..77476,
78320..78325,78599..78601,78608..78610))
/gene="leuC"
/locus_tag="SF0067"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:153133"
misc_feature complement(order(77420..77422,77474..77479,77486..77488,
77666..77668,78317..78319))
/gene="leuC"
/locus_tag="SF0067"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:153133"
gene complement(78709..79803)
/gene="leuB"
/locus_tag="SF0068"
/db_xref="GeneID:1024533"
CDS complement(78709..79803)
/gene="leuB"
/locus_tag="SF0068"
/note="Code: E; COG: COG0473"
/codon_start=1
/transl_table=11
/product="3-isopropylmalate dehydrogenase"
/protein_id="NP_706026.3"
/db_xref="GeneID:1024533"
/translation="MMSKNYHIAVLPGDGIGPEVMTQALKVLNAVRNRFAMRITTSHY
DVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKH
FKLFSNLRPAKLYQGLEAFCPLRADIAANGFDIQCVRELTGGIYFGQPKGREGSGQYE
KAFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYP
DVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQ
GFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG
IRTGDLARGAAAVSTDEMGDIIARYVAEGV"
misc_feature complement(78715..79794)
/gene="leuB"
/locus_tag="SF0068"
/note="3-isopropylmalate dehydrogenase; Provisional;
Region: PRK00772"
/db_xref="CDD:234832"
gene complement(79800..81371)
/gene="leuA"
/locus_tag="SF0069"
/db_xref="GeneID:1024546"
CDS complement(79800..81371)
/gene="leuA"
/locus_tag="SF0069"
/note="Code: E; COG: COG0119"
/codon_start=1
/transl_table=11
/product="2-isopropylmalate synthase"
/protein_id="NP_706027.1"
/db_xref="GeneID:1024546"
/translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN
AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS
LTAKGHGKDALGQVDIVTNYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
LQRKTQHNENNKETV"
misc_feature complement(79836..81371)
/gene="leuA"
/locus_tag="SF0069"
/note="2-isopropylmalate synthase; Validated; Region:
PRK00915"
/db_xref="CDD:234864"
misc_feature complement(order(80760..80762,80766..80768,80859..80861,
80865..80867,80949..80951,80955..80957,81081..81083,
81147..81149,81240..81242,81321..81323,81330..81335))
/gene="leuA"
/locus_tag="SF0069"
/note="active site"
/db_xref="CDD:163678"
misc_feature complement(order(81240..81242,81330..81335))
/gene="leuA"
/locus_tag="SF0069"
/note="catalytic residues [active]"
/db_xref="CDD:163678"
misc_feature complement(order(80760..80762,80766..80768))
/gene="leuA"
/locus_tag="SF0069"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163678"
gene complement(81464..81550)
/gene="leuL"
/locus_tag="SF0070"
/db_xref="GeneID:1024519"
CDS complement(81464..81550)
/gene="leuL"
/locus_tag="SF0070"
/codon_start=1
/transl_table=11
/product="leu operon leader peptide"
/protein_id="NP_706028.1"
/db_xref="GeneID:1024519"
/translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH"
misc_feature complement(81467..81550)
/gene="leuL"
/locus_tag="SF0070"
/note="leu operon leader peptide; Provisional; Region:
PRK09925"
/db_xref="CDD:137592"
gene 82032..83153
/gene="leuO"
/locus_tag="SF0071"
/db_xref="GeneID:1024560"
CDS 82032..83153
/gene="leuO"
/locus_tag="SF0071"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="transcriptional activator for leuABCD operon"
/protein_id="NP_706029.3"
/db_xref="GeneID:1024560"
/translation="MTHSTAMDSVFIRTRIFMFSEFYSFCFFLFYMHDKSYSSGLFLC
IPIRERELSVTVELSMPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAA
HVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELP
GSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRY
QETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLD
RFASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQV
LPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR"
misc_feature 82209..83150
/gene="leuO"
/locus_tag="SF0071"
/note="leucine transcriptional activator; Reviewed;
Region: leuO; PRK09508"
/db_xref="CDD:181918"
gene 83387..85195
/gene="ilvI"
/locus_tag="SF0072"
/db_xref="GeneID:1025955"
CDS 83387..85195
/gene="ilvI"
/locus_tag="SF0072"
/note="Code: EH; COG: COG0028"
/codon_start=1
/transl_table=11
/product="acetolactate synthase III large subunit"
/protein_id="NP_706030.4"
/db_xref="GeneID:1025955"
/translation="MSLAANCLSKIGRLMCFTHFFRQTVRQAMEMLSGAEMVVRSLID
QGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVT
SGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSFLV
KQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVCPESVSMRSYNPTTT
GHKGQIKRALQTLVAAKKPVVYVGGGAIMAGCHQQLKETVEALNLPVVSSLMGMGAFP
ATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDID
PTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRALQCLK
YDTHSEKIKPQAVIETLWRLTNGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGT
MGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGM
VKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNN
RLVFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT"
misc_feature 83471..85192
/gene="ilvI"
/locus_tag="SF0072"
/note="acetolactate synthase 3 large subunit; Region:
PRK07979"
/db_xref="CDD:181185"
gene 85198..85689
/gene="ilvH"
/locus_tag="SF0073"
/db_xref="GeneID:1024544"
CDS 85198..85689
/gene="ilvH"
/locus_tag="SF0073"
/note="Code: E; COG: COG0440"
/codon_start=1
/transl_table=11
/product="acetolactate synthase small subunit"
/protein_id="NP_706031.2"
/db_xref="GeneID:1024544"
/translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIRDVAKIVEVARSGVVGLSRGDK
IMR"
misc_feature 85198..85683
/gene="ilvH"
/locus_tag="SF0073"
/note="acetolactate synthase 3 regulatory subunit;
Reviewed; Region: ilvH; PRK11895"
/db_xref="CDD:183365"
gene 85701..85787
/gene="fruL"
/locus_tag="SF0074"
/db_xref="GeneID:1024557"
CDS 85701..85787
/gene="fruL"
/locus_tag="SF0074"
/codon_start=1
/transl_table=11
/product="fruR leader peptide"
/protein_id="NP_706032.1"
/db_xref="GeneID:1024557"
/translation="MRNLQPNMSRWAFFAKSVGTWNKSSCRS"
gene 85869..86873
/gene="fruR"
/locus_tag="SF0075"
/db_xref="GeneID:1024540"
CDS 85869..86873
/gene="fruR"
/locus_tag="SF0075"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator FruR"
/protein_id="NP_706033.1"
/db_xref="GeneID:1024540"
/translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV
GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
"
misc_feature 85869..86852
/gene="fruR"
/locus_tag="SF0075"
/note="catabolite repressor/activator; Region: PRK11303"
/db_xref="CDD:236897"
mobile_element 86941..87708
/mobile_element_type="insertion sequence:IS1"
gene 86996..87271
/gene="insA"
/locus_tag="SF0076"
/db_xref="GeneID:1024537"
CDS 86996..87271
/gene="insA"
/locus_tag="SF0076"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706034.1"
/db_xref="GeneID:1024537"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 87017..>87268
/gene="insA"
/locus_tag="SF0076"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 87298..87693
/gene="insB"
/locus_tag="SF0077"
/db_xref="GeneID:1027517"
CDS 87298..87693
/gene="insB"
/locus_tag="SF0077"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706035.1"
/db_xref="GeneID:1027517"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 87301..87690
/gene="insB"
/locus_tag="SF0077"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 88252..88710
/gene="yabB"
/locus_tag="SF0078"
/db_xref="GeneID:1024547"
CDS 88252..88710
/gene="yabB"
/locus_tag="SF0078"
/note="Code: S; COG: COG2001"
/codon_start=1
/transl_table=11
/product="cell division protein MraZ"
/protein_id="NP_706036.2"
/db_xref="GeneID:1024547"
/translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
LLLYPLPEWEIIEQKLSRLLSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
misc_feature 88252..88704
/gene="yabB"
/locus_tag="SF0078"
/note="protein domain of unknown function (UPF0040)
includes MraZ; Region: MraZ; cl03563"
/db_xref="CDD:470838"
misc_feature order(88486..88488,88492..88494,88576..88578,88597..88599,
88624..88629,88636..88638)
/gene="yabB"
/locus_tag="SF0078"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:293784"
misc_feature 88510..88524
/gene="yabB"
/locus_tag="SF0078"
/note="DXXXR [structural motif]; Region: DXXXR"
/db_xref="CDD:293784"
gene 88712..89653
/gene="mraW"
/locus_tag="SF0079"
/db_xref="GeneID:1024552"
CDS 88712..89653
/gene="mraW"
/locus_tag="SF0079"
/note="Code: M; COG: COG0275"
/codon_start=1
/transl_table=11
/product="16S rRNA m(4)C1402 methyltransferase"
/protein_id="NP_706037.1"
/db_xref="GeneID:1024552"
/translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEEHF
AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL
GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
misc_feature 88712..89644
/gene="mraW"
/locus_tag="SF0079"
/note="16S rRNA C1402 N4-methylase RsmH [Translation,
ribosomal structure and biogenesis]; Region: RmsH;
COG0275"
/db_xref="CDD:440044"
gene 89650..90015
/gene="ftsL"
/locus_tag="SF0080"
/db_xref="GeneID:1024550"
CDS 89650..90015
/gene="ftsL"
/locus_tag="SF0080"
/note="Code: D; COG: COG3116"
/codon_start=1
/transl_table=11
/product="cell division protein FtsL"
/protein_id="NP_706038.1"
/db_xref="GeneID:1024550"
/translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
EKLQMQHVDPSQENIVVQK"
misc_feature 89698..90012
/gene="ftsL"
/locus_tag="SF0080"
/note="cell division protein FtsL; Provisional; Region:
PRK10772"
/db_xref="CDD:182717"
gene 90031..91797
/gene="ftsI"
/locus_tag="SF0081"
/db_xref="GeneID:1024510"
CDS 90031..91797
/gene="ftsI"
/locus_tag="SF0081"
/note="Code: M; COG: COG0768"
/codon_start=1
/transl_table=11
/product="peptidoglycan synthase FtsI"
/protein_id="NP_706039.1"
/db_xref="GeneID:1024510"
/translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNSDMADYIKKLKLPGIH
LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALTMPSSALVDTYSRFGLGKATNLG
LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
ALTTGDKNEFVINQGEGTGGRS"
misc_feature 90034..91767
/gene="ftsI"
/locus_tag="SF0081"
/note="peptidoglycan synthase FtsI; Provisional; Region:
PRK15105"
/db_xref="CDD:185060"
gene 91784..93271
/gene="murE"
/locus_tag="SF0082"
/db_xref="GeneID:1024503"
CDS 91784..93271
/gene="murE"
/locus_tag="SF0082"
/note="Code: M; COG: COG0769"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase"
/protein_id="NP_706040.1"
/db_xref="GeneID:1024503"
/translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
SAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFPASVFTNLSRDHLDYHGDM
EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKA
TEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAA
RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGGIA"
misc_feature 91784..93265
/gene="murE"
/locus_tag="SF0082"
/note="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase; Provisional; Region: murE;
PRK00139"
/db_xref="CDD:234660"
gene 93268..94626
/gene="murF"
/locus_tag="SF0083"
/db_xref="GeneID:1024563"
CDS 93268..94626
/gene="murF"
/locus_tag="SF0083"
/note="Code: M; COG: COG0770"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
alanine ligase"
/protein_id="NP_706041.1"
/db_xref="GeneID:1024563"
/translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPALV
VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGMEFTLQTPTGSVDVLLP
LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSMGK
QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG
TC"
misc_feature 93268..94623
/gene="murF"
/locus_tag="SF0083"
/note="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase; Reviewed; Region: murF; PRK10773"
/db_xref="CDD:182718"
gene 94620..95702
/gene="mraY"
/locus_tag="SF0084"
/db_xref="GeneID:1024554"
CDS 94620..95702
/gene="mraY"
/locus_tag="SF0084"
/note="Code: M; COG: COG0472"
/codon_start=1
/transl_table=11
/product="phospho-N-acetylmuramoyl-pentapeptide-
transferase"
/protein_id="NP_706042.1"
/db_xref="GeneID:1024554"
/translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL
VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
EPRVIVRFWIISLMLVLIGLATLKVR"
misc_feature 94728..95699
/gene="mraY"
/locus_tag="SF0084"
/note="phospho-N-acetylmuramoyl-pentapeptide-transferase;
Region: mraY; TIGR00445"
/db_xref="CDD:161884"
misc_feature 94962..94967
/gene="mraY"
/locus_tag="SF0084"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:133462"
misc_feature 95409..95420
/gene="mraY"
/locus_tag="SF0084"
/note="putative catalytic motif [active]"
/db_xref="CDD:133462"
misc_feature order(95568..95570,95586..95600)
/gene="mraY"
/locus_tag="SF0084"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:133462"
gene 95705..97021
/gene="murD"
/locus_tag="SF0085"
/db_xref="GeneID:1024564"
CDS 95705..97021
/gene="murD"
/locus_tag="SF0085"
/note="Code: M; COG: COG0771"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase"
/protein_id="NP_706043.1"
/db_xref="GeneID:1024564"
/translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE
AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELS
SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALVA
LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
HVDGTLHLLLGGDGKSADFSPLVRYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
misc_feature 95711..97015
/gene="murD"
/locus_tag="SF0085"
/note="UDP-N-acetylmuramoylalanine-D-glutamate ligase
[Cell wall/membrane/envelope biogenesis]; Region: MurD;
COG0771"
/db_xref="CDD:440534"
gene 97021..98265
/gene="ftsW"
/locus_tag="SF0086"
/db_xref="GeneID:1024522"
CDS 97021..98265
/gene="ftsW"
/locus_tag="SF0086"
/note="Code: D; COG: COG0772"
/codon_start=1
/transl_table=11
/product="cell division protein FtsW"
/protein_id="NP_706044.2"
/db_xref="GeneID:1024522"
/translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY
DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
PMEFWQRYSATMLLGSIILLMIVLVVGSAVKGASRWIDLGLLRIQPAELTKLSLFCYI
ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK
LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
MLLRIDYETRLEKAQAFVRGSR"
misc_feature 97051..98262
/gene="ftsW"
/locus_tag="SF0086"
/note="cell division protein FtsW; Provisional; Region:
PRK10774"
/db_xref="CDD:182719"
gene 98262..99329
/gene="murG"
/locus_tag="SF0087"
/db_xref="GeneID:1024509"
CDS 98262..99329
/gene="murG"
/locus_tag="SF0087"
/note="Code: M; COG: COG0707"
/codon_start=1
/transl_table=11
/product="undecaprenyldiphospho-muramoylpentapeptide
beta-N- acetylglucosaminyltransferase"
/protein_id="NP_706045.1"
/db_xref="GeneID:1024509"
/translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHYLMAQGWQVRWLGTADR
MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM
GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
AASIPDATERVANEVSRAARA"
misc_feature 98277..99326
/gene="murG"
/locus_tag="SF0087"
/note="undecaprenyldiphospho-muramoylpentapeptide beta-N-
acetylglucosaminyltransferase; Provisional; Region: murG;
PRK00726"
/db_xref="CDD:234825"
gene 99383..100858
/gene="murC"
/locus_tag="SF0088"
/db_xref="GeneID:1024549"
CDS 99383..100858
/gene="murC"
/locus_tag="SF0088"
/note="Code: M; COG: COG0773"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramate--L-alanine ligase"
/protein_id="NP_706046.1"
/db_xref="GeneID:1024549"
/translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
QISGSDLAPNPVTQQLLNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
QDKEPMCVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEF
PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
misc_feature 99443..100810
/gene="murC"
/locus_tag="SF0088"
/note="UDP-N-acetylmuramate--L-alanine ligase; Region:
murC; TIGR01082"
/db_xref="CDD:273433"
gene 100851..101771
/gene="ddl"
/locus_tag="SF0089"
/db_xref="GeneID:1024534"
CDS 100851..101771
/gene="ddl"
/locus_tag="SF0089"
/note="Code: M; COG: COG1181"
/codon_start=1
/transl_table=11
/product="D-alanine--D-alanine ligase"
/protein_id="NP_706047.1"
/db_xref="GeneID:1024534"
/translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSIDKLRSKL
LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE
NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS
DETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
MTSHSLVPMAARQAGMSFSQLVVRILELAD"
misc_feature 100851..101768
/gene="ddl"
/locus_tag="SF0089"
/note="D-alanine--D-alanine ligase; Reviewed; Region: ddl;
PRK01372"
/db_xref="CDD:234948"
gene 101773..102603
/gene="ftsQ"
/locus_tag="SF0090"
/db_xref="GeneID:1024529"
CDS 101773..102603
/gene="ftsQ"
/locus_tag="SF0090"
/note="Code: M; COG: COG1589"
/codon_start=1
/transl_table=11
/product="cell division protein FtsQ"
/protein_id="NP_706048.1"
/db_xref="GeneID:1024529"
/translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
VLSWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK
RLVRFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
"
misc_feature 101773..102564
/gene="ftsQ"
/locus_tag="SF0090"
/note="cell division protein FtsQ; Provisional; Region:
PRK10775"
/db_xref="CDD:182720"
gene 102600..103862
/gene="ftsA"
/locus_tag="SF0091"
/db_xref="GeneID:1024541"
CDS 102600..103862
/gene="ftsA"
/locus_tag="SF0091"
/note="Code: D; COG: COG0849"
/codon_start=1
/transl_table=11
/product="cell division protein FtsA"
/protein_id="NP_706049.1"
/db_xref="GeneID:1024541"
/translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
GEAEVEKRVTASVGSWIKRLNSWLRKEF"
misc_feature 102600..103859
/gene="ftsA"
/locus_tag="SF0091"
/note="cell division protein FtsA; Reviewed; Region: ftsA;
PRK09472"
/db_xref="CDD:181887"
gene 103923..105074
/gene="ftsZ"
/locus_tag="SF0092"
/db_xref="GeneID:1024507"
CDS 103923..105074
/gene="ftsZ"
/locus_tag="SF0092"
/note="Code: D; COG: COG0206"
/codon_start=1
/transl_table=11
/product="cell division protein FtsZ"
/protein_id="NP_706050.2"
/db_xref="GeneID:1024507"
/translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
EMGYAMMGSGVASGENRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLGLVEVE
TVGNTIRAFASGNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFVRKQAD"
misc_feature 103992..105059
/gene="ftsZ"
/locus_tag="SF0092"
/note="Cell division GTPase FtsZ [Cell cycle control, cell
division, chromosome partitioning]; Region: FtsZ; COG0206"
/db_xref="CDD:439976"
gene 105175..106092
/gene="lpxC"
/locus_tag="SF0093"
/db_xref="GeneID:1025956"
CDS 105175..106092
/gene="lpxC"
/locus_tag="SF0093"
/note="Code: M; COG: COG0774"
/codon_start=1
/transl_table=11
/product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
deacetylase"
/protein_id="NP_706051.1"
/db_xref="GeneID:1025956"
/translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL
AKQEAWEYVTFQDDAELPLAFKAPSAVLA"
misc_feature 105178..106077
/gene="lpxC"
/locus_tag="SF0093"
/note="UDP-3-0-acyl N-acetylglucosamine deacetylase;
Region: lpxC; TIGR00325"
/db_xref="CDD:273014"
gene 106248..106835
/gene="yacA"
/locus_tag="SF0094"
/db_xref="GeneID:1024505"
CDS 106248..106835
/gene="yacA"
/locus_tag="SF0094"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706052.4"
/db_xref="GeneID:1024505"
/translation="MLWTSGFNDKICALNTFEFDRDGNNVSGILTRWRQFGKRYFWPH
LLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYS
VDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEK
GYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT"
misc_feature 106326..106829
/gene="yacA"
/locus_tag="SF0094"
/note="secA regulator SecM; Region: PRK02943"
/db_xref="CDD:235088"
gene 106897..109602
/gene="secA"
/locus_tag="SF0095"
/db_xref="GeneID:1024511"
CDS 106897..109602
/gene="secA"
/locus_tag="SF0095"
/note="Code: N; COG: COG0653"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecA"
/protein_id="NP_706053.1"
/db_xref="GeneID:1024511"
/translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK
GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPITEWLDKEPELHEETLRERIL
AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
misc_feature 106900..109599
/gene="secA"
/locus_tag="SF0095"
/note="Preprotein translocase subunit SecA (ATPase, RNA
helicase) [Intracellular trafficking, secretion, and
vesicular transport]; Region: SecA; COG0653"
/db_xref="CDD:440418"
gene 109662..110051
/gene="mutT"
/locus_tag="SF0096"
/db_xref="GeneID:1024514"
CDS 109662..110051
/gene="mutT"
/locus_tag="SF0096"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="nucleoside triphosphate pyrophosphohydrolase"
/protein_id="NP_706054.1"
/db_xref="GeneID:1024514"
/translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVESWEGVPWGKEGQPG
EWMSLVGLNADDFPPANEPVIAKLKRL"
misc_feature 109662..110048
/gene="mutT"
/locus_tag="SF0096"
/note="8-oxo-dGTP diphosphatase MutT; Region: PRK10776"
/db_xref="CDD:182721"
gene complement(110066..110200)
/locus_tag="SF0097"
/db_xref="GeneID:1024513"
CDS complement(110066..110200)
/locus_tag="SF0097"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706055.1"
/db_xref="GeneID:1024513"
/translation="MAIFPKAMTGAKSQSSDICLMPHVGLIRRGQRRIRHLVQMSDAA
"
gene complement(110151..110348)
/gene="yacG"
/locus_tag="SF0098"
/db_xref="GeneID:1027518"
CDS complement(110151..110348)
/gene="yacG"
/locus_tag="SF0098"
/note="Code: S; COG: COG3024"
/codon_start=1
/transl_table=11
/product="DNA gyrase inhibitor"
/protein_id="NP_706056.1"
/db_xref="GeneID:1027518"
/translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
KRIPSSGDLSESDDWSEEPKQ"
misc_feature complement(110163..110348)
/gene="yacG"
/locus_tag="SF0098"
/note="DNA gyrase inhibitor YacG; Region: PRK00418"
/db_xref="CDD:234754"
gene complement(110358..111101)
/gene="yacF"
/locus_tag="SF0099"
/db_xref="GeneID:1024523"
CDS complement(110358..111101)
/gene="yacF"
/locus_tag="SF0099"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706057.1"
/db_xref="GeneID:1024523"
/translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF
RNVSELLDVFERGEVRTELLKELNRQQRKLQTWIGVPGVDQSRIEALIQQLKAAVSVL
ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
KSRFAIRFMPLDTENGQVPERLDFELACC"
misc_feature complement(110361..111101)
/gene="yacF"
/locus_tag="SF0099"
/note="cell division protein ZapD; Region: PRK05287"
/db_xref="CDD:235389"
gene complement(111101..111721)
/gene="coaE"
/locus_tag="SF0100"
/db_xref="GeneID:1024517"
CDS complement(111101..111721)
/gene="coaE"
/locus_tag="SF0100"
/note="Code: H; COG: COG0237"
/codon_start=1
/transl_table=11
/product="dephospho-CoA kinase"
/protein_id="NP_706058.1"
/db_xref="GeneID:1024517"
/translation="MGYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
PALHAIADHFGENMIAADGTLQRRALRERIFANPEEKNWLNDLLHPLIQQETQHQIQQ
ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA
TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
misc_feature complement(111191..111715)
/gene="coaE"
/locus_tag="SF0100"
/note="Dephospho-CoA kinase; Region: CoaE; pfam01121"
/db_xref="CDD:426062"
misc_feature complement(order(111245..111247,111380..111385,
111455..111457,111623..111625,111698..111700))
/gene="coaE"
/locus_tag="SF0100"
/note="CoA-binding site [chemical binding]; other site"
/db_xref="CDD:238980"
misc_feature complement(order(111197..111199,111302..111304,
111677..111682,111689..111697))
/gene="coaE"
/locus_tag="SF0100"
/note="ATP-binding [chemical binding]; other site"
/db_xref="CDD:238980"
gene 111946..112989
/gene="guaC"
/locus_tag="SF0101"
/db_xref="GeneID:1024535"
CDS 111946..112989
/gene="guaC"
/locus_tag="SF0101"
/note="Code: F; COG: COG0516"
/codon_start=1
/transl_table=11
/product="guanosine 5'-monophosphate oxidoreductase"
/protein_id="NP_706059.1"
/db_xref="GeneID:1024535"
/translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSW
SGVPIIAANMDTVGTFSMASALASFDILTAVHKHFSVEEWQAFINNSSADVLKHVMVS
TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
RHVGGVAEYRAAEGKTVKLPLRGQVENTARDILGGLRSACTYVGASRLKELTKRTTFI
RVLEQENRIFNNL"
misc_feature 111946..112983
/gene="guaC"
/locus_tag="SF0101"
/note="guanosine 5'-monophosphate oxidoreductase;
Provisional; Region: PRK05096"
/db_xref="CDD:235343"
gene complement(113024..114226)
/gene="hofC"
/locus_tag="SF0103"
/db_xref="GeneID:1024516"
CDS complement(113024..114226)
/gene="hofC"
/locus_tag="SF0103"
/note="Code: N; COG: COG1459"
/codon_start=1
/transl_table=11
/product="type IV pilin biogenesis protein"
/protein_id="NP_706061.1"
/db_xref="GeneID:1024516"
/translation="MASKQLWRWHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLS
LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH
DLEQGIAFSNALLPWSEAFPPLYQAMIRTGELTGKLDECCFELARQQKSQRQLTDKVK
SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWGW
LLVLFGFLLAIANKLLMRRPTWLIARQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA
GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTG
EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL
GDAMSGMG"
misc_feature complement(113036..114226)
/gene="hofC"
/locus_tag="SF0103"
/note="protein transport protein HofC; Region: PRK10573"
/db_xref="CDD:182559"
gene complement(114216..115363)
/gene="hofB"
/locus_tag="SF0104"
/pseudo
/db_xref="GeneID:1024498"
misc_feature complement(114216..115363)
/gene="hofB"
/locus_tag="SF0104"
/note="'Similar to Escherichia coli K12 integral membrane
protein involved in biogenesis of fimbriae, protein
transport, DNA uptake gi: 1786296 (462 aa). BLAST with
identity of 97% in 382 aa. This CDS contains deletion. The
sequence has been checked and is believed to be correct.'"
/pseudo
gene complement(115373..115813)
/gene="ppdD"
/locus_tag="SF0105"
/db_xref="GeneID:1024512"
CDS complement(115373..115813)
/gene="ppdD"
/locus_tag="SF0105"
/note="Code: N; COG: COG2165"
/codon_start=1
/transl_table=11
/product="major pilin subunit"
/protein_id="NP_706062.1"
/db_xref="GeneID:1024512"
/translation="MDKQRGFTLIELMVVIGIIAILSSIGIPAYQNYLRKAALTDMLQ
TFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNG
LSVVMTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN"
misc_feature complement(115376..115813)
/gene="ppdD"
/locus_tag="SF0105"
/note="putative major pilin subunit; Provisional; Region:
PRK10574"
/db_xref="CDD:236718"
gene complement(116016..116909)
/gene="nadC"
/locus_tag="SF0106"
/db_xref="GeneID:1024524"
CDS complement(116016..116909)
/gene="nadC"
/locus_tag="SF0106"
/note="Code: H; COG: COG0157"
/codon_start=1
/transl_table=11
/product="quinolinate phosphoribosyltransferase"
/protein_id="NP_706063.2"
/db_xref="GeneID:1024524"
/translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
PLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR
SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
FISVGALTKHVQALDLSMRFR"
misc_feature complement(116019..116834)
/gene="nadC"
/locus_tag="SF0106"
/note="Nicotinate-nucleotide pyrophosphorylase [Coenzyme
transport and metabolism]; Region: NadC; COG0157"
/db_xref="CDD:439927"
gene 116997..117548
/gene="ampD"
/locus_tag="SF0107"
/db_xref="GeneID:1024479"
CDS 116997..117548
/gene="ampD"
/locus_tag="SF0107"
/note="Code: M; COG: COG3023"
/codon_start=1
/transl_table=11
/product="N-acetyl-anhydromuranmyl-L-alanine amidase"
/protein_id="NP_706064.1"
/db_xref="GeneID:1024479"
/translation="MLLEQGWLVGARRVPSPHYDCRLDDETPTLLVVHNISLPPGEFG
GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPD
RKTDPGPAFDWARFRALVSKETT"
misc_feature 116997..117545
/gene="ampD"
/locus_tag="SF0107"
/note="1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;
Region: PRK11789"
/db_xref="CDD:236984"
misc_feature order(117096..117098,117216..117218,117456..117458,
117480..117482,117486..117488)
/gene="ampD"
/locus_tag="SF0107"
/note="amidase catalytic site [active]"
/db_xref="CDD:133475"
misc_feature order(117096..117098,117456..117458,117486..117488)
/gene="ampD"
/locus_tag="SF0107"
/note="Zn binding residues [ion binding]; other site"
/db_xref="CDD:133475"
misc_feature order(117099..117104,117174..117176,117216..117218,
117258..117260,117279..117284,117321..117323,
117456..117458,117468..117470,117480..117488)
/gene="ampD"
/locus_tag="SF0107"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133475"
gene 117545..118399
/gene="ampE"
/locus_tag="SF0108"
/db_xref="GeneID:1027516"
CDS 117545..118399
/gene="ampE"
/locus_tag="SF0108"
/codon_start=1
/transl_table=11
/product="regulatory protein AmpE"
/protein_id="NP_706065.2"
/db_xref="GeneID:1027516"
/translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
SHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPV
TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL
LTIYGALV"
misc_feature 117545..118396
/gene="ampE"
/locus_tag="SF0108"
/note="Regulatory signalling modulator protein AmpE;
Region: AmpE; pfam17113"
/db_xref="CDD:374997"
gene complement(118442..119815)
/gene="aroP"
/locus_tag="SF0109"
/db_xref="GeneID:1024518"
CDS complement(118442..119815)
/gene="aroP"
/locus_tag="SF0109"
/note="Code: E; COG: COG1113"
/codon_start=1
/transl_table=11
/product="aromatic amino acid transporter"
/protein_id="NP_706066.1"
/db_xref="GeneID:1024518"
/translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
VIAVVAMIIFGGWLLFSGNGGPQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
AKAVKAH"
misc_feature complement(118445..119812)
/gene="aroP"
/locus_tag="SF0109"
/note="aromatic amino acid transporter AroP; Region:
PRK10238"
/db_xref="CDD:182324"
gene 120356..121120
/gene="pdhR"
/locus_tag="SF0110"
/db_xref="GeneID:1024475"
CDS 120356..121120
/gene="pdhR"
/locus_tag="SF0110"
/note="Code: K; COG: COG2186"
/codon_start=1
/transl_table=11
/product="transcriptional regulator PdhR"
/protein_id="NP_706067.2"
/db_xref="GeneID:1024475"
/translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMVGKPEEAR
EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
misc_feature 120356..121057
/gene="pdhR"
/locus_tag="SF0110"
/note="pyruvate dehydrogenase complex transcriptional
repressor PdhR; Region: pdhR; PRK09464"
/db_xref="CDD:181879"
gene 121281..123944
/gene="aceE"
/locus_tag="SF0111"
/db_xref="GeneID:1024528"
CDS 121281..123944
/gene="aceE"
/locus_tag="SF0111"
/note="Code: C; COG: COG2609"
/codon_start=1
/transl_table=11
/product="pyruvate dehydrogenase subunit E1"
/protein_id="NP_706068.1"
/db_xref="GeneID:1024528"
/translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA
RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTI
KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKELSTTIAFVRALNVMLK
NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
misc_feature 121281..123941
/gene="aceE"
/locus_tag="SF0111"
/note="pyruvate dehydrogenase subunit E1; Reviewed;
Region: aceE; PRK09405"
/db_xref="CDD:236500"
gene 123959..125839
/gene="aceF"
/locus_tag="SF0112"
/db_xref="GeneID:1024520"
CDS 123959..125839
/gene="aceF"
/locus_tag="SF0112"
/note="Code: C; COG: COG0508"
/codon_start=1
/transl_table=11
/product="pyruvate dehydrogenase
dihydrolipoyltransacetylase"
/protein_id="NP_706069.1"
/db_xref="GeneID:1024520"
/translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEATPAATPAPAAGVKEVNVPDIGGDE
VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAKAEGKSEFAENDSYVHATPLIRRLAR
EFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKVDFSK
FGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAKRKLD
VKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFK
DVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEV
AILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSDIRRL
VM"
misc_feature 123959..125836
/gene="aceF"
/locus_tag="SF0112"
/note="pyruvate dehydrogenase dihydrolipoyltransacetylase;
Validated; Region: aceF; PRK11854"
/db_xref="CDD:236999"
gene 126164..127588
/gene="lpdA"
/locus_tag="SF0113"
/db_xref="GeneID:1024526"
CDS 126164..127588
/gene="lpdA"
/locus_tag="SF0113"
/note="Code: C; COG: COG1249"
/codon_start=1
/transl_table=11
/product="dihydrolipoamide dehydrogenase"
/protein_id="NP_706070.2"
/db_xref="GeneID:1024526"
/translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
SVGLAAEVFEGSITDLPNPKAKKK"
misc_feature 126173..127546
/gene="lpdA"
/locus_tag="SF0113"
/note="Dihydrolipoamide dehydrogenase (E3) component of
pyruvate/2-oxoglutarate dehydrogenase complex or
glutathione oxidoreductase [Energy production and
conversion]; Region: Lpd; COG1249"
/db_xref="CDD:440861"
gene complement(127659..129512)
/gene="yacH"
/locus_tag="SF0114"
/pseudo
/db_xref="GeneID:1024494"
misc_feature complement(127659..129512)
/gene="yacH"
/locus_tag="SF0114"
/note="Similar to Escherichia coli K12 membrane protein
gi: 1786308 (618 aa). BLAST with identity of 97% in 617
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene 129867..132464
/gene="acnB"
/locus_tag="SF0115"
/db_xref="GeneID:1024477"
CDS 129867..132464
/gene="acnB"
/locus_tag="SF0115"
/note="Code: C; COG: COG1049"
/codon_start=1
/transl_table=11
/product="aconitate hydratase B"
/protein_id="NP_706071.2"
/db_xref="GeneID:1024477"
/translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF
LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP
ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG
PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
KIAPIFFNTMEDAGALPIEVNVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA
CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLSSNI
VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLAEIKEPIM
CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
DGVIFQTAV"
misc_feature 129867..132458
/gene="acnB"
/locus_tag="SF0115"
/note="Aconitase B [Energy production and conversion];
Region: AcnB; COG1049"
/db_xref="CDD:440670"
gene 132591..133001
/gene="yacL"
/locus_tag="SF0116"
/db_xref="GeneID:1024484"
CDS 132591..133001
/gene="yacL"
/locus_tag="SF0116"
/note="Code: S; COG: COG3112"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706072.3"
/db_xref="GeneID:1024484"
/translation="MARCDFGALPGAEEHTMDYEFLRDITGVVKVRMSMGHEVVGHWF
NEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDAEEVMVRANQLEFAGDEM
EEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK"
misc_feature 132639..132998
/gene="yacL"
/locus_tag="SF0116"
/note="hypothetical protein; Provisional; Region:
PRK05248"
/db_xref="CDD:235372"
gene complement(133039..133833)
/gene="speD"
/locus_tag="SF0117"
/db_xref="GeneID:1025958"
CDS complement(133039..133833)
/gene="speD"
/locus_tag="SF0117"
/note="Code: E; COG: COG1586"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine decarboxylase"
/protein_id="NP_706073.1"
/db_xref="GeneID:1025958"
/translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
misc_feature complement(133042..133833)
/gene="speD"
/locus_tag="SF0117"
/note="adenosylmethionine decarboxylase; Region: PRK05462"
/db_xref="CDD:235480"
gene complement(133849..134715)
/gene="speE"
/locus_tag="SF0118"
/db_xref="GeneID:1024480"
CDS complement(133849..134715)
/gene="speE"
/locus_tag="SF0118"
/note="Code: E; COG: COG0421"
/codon_start=1
/transl_table=11
/product="spermidine synthase"
/protein_id="NP_706074.1"
/db_xref="GeneID:1024480"
/translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFQLVIDDGVNFVNQTSQTFDVIISDCT
DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP
QYLQDALASQPS"
misc_feature complement(133864..134697)
/gene="speE"
/locus_tag="SF0118"
/note="polyamine aminopropyltransferase; Region: PRK00811"
/db_xref="CDD:234843"
misc_feature complement(order(134242..134244,134293..134301,
134389..134394,134446..134466))
/gene="speE"
/locus_tag="SF0118"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(134821..135339)
/gene="yacC"
/locus_tag="SF0120"
/db_xref="GeneID:1024486"
CDS complement(134821..135339)
/gene="yacC"
/locus_tag="SF0120"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706075.1"
/db_xref="GeneID:1024486"
/translation="MHSYFLILKQAKQNQTLSIVLPLTGRSSRRHNLIDNNGRRLARS
VLTFIFFKPLVEAMKTFFRTVLFGSLIAVCANSYALSESEAEDMADLTAVFVFLKNDC
GYQNLSNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKAL
ARDSLSLLAYVK"
misc_feature complement(134824..135168)
/gene="yacC"
/locus_tag="SF0120"
/note="YacC family pilotin-like protein; Region:
pilot_rel_YacC; NF037975"
/db_xref="CDD:411579"
gene 135334..136884
/gene="yacK"
/locus_tag="SF0119"
/db_xref="GeneID:1024490"
CDS 135334..136884
/gene="yacK"
/locus_tag="SF0119"
/note="Code: Q; COG: COG2132"
/codon_start=1
/transl_table=11
/product="multicopper oxidase"
/protein_id="NP_706076.2"
/db_xref="GeneID:1024490"
/translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
RNRIQLTIGAGQSTFGEKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLAEETTLHW
HGLEVPGDVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
VIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG
AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELTVL
MGERFEVLEEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHNAPKEHAYMAHCHLLEHEDT
GMMLGFTV"
misc_feature 135334..136881
/gene="yacK"
/locus_tag="SF0119"
/note="multicopper oxidase; Provisional; Region: PRK10965"
/db_xref="CDD:236810"
gene complement(136931..139261)
/gene="gcd"
/locus_tag="SF0121"
/pseudogene="unknown"
/db_xref="GeneID:1024501"
gene 139510..140058
/gene="hpt"
/locus_tag="SF0122"
/db_xref="GeneID:1024487"
CDS 139510..140058
/gene="hpt"
/locus_tag="SF0122"
/note="Code: F; COG: COG0634"
/codon_start=1
/transl_table=11
/product="hypoxanthine phosphoribosyltransferase"
/protein_id="NP_706078.4"
/db_xref="GeneID:1024487"
/translation="MVRDMKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVG
LLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIV
EDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGY
GIDYAQRYRHLPYIGKVILLDE"
misc_feature 139522..140055
/gene="hpt"
/locus_tag="SF0122"
/note="hypoxanthine phosphoribosyltransferase;
Provisional; Region: PRK15423"
/db_xref="CDD:185321"
misc_feature order(139645..139647,139651..139653,139816..139824,
139828..139842,139912..139914)
/gene="hpt"
/locus_tag="SF0122"
/note="active site"
/db_xref="CDD:206754"
gene complement(140099..140761)
/gene="yadF"
/locus_tag="SF0123"
/db_xref="GeneID:1024493"
CDS complement(140099..140761)
/gene="yadF"
/locus_tag="SF0123"
/note="Code: P; COG: COG0288"
/codon_start=1
/transl_table=11
/product="carbonic anhydrase"
/protein_id="NP_706079.1"
/db_xref="GeneID:1024493"
/translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD
SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
HK"
misc_feature complement(140102..140761)
/gene="yadF"
/locus_tag="SF0123"
/note="carbonic anhydrase; Provisional; Region: PRK10437"
/db_xref="CDD:182460"
misc_feature complement(order(140219..140221,140459..140461,
140468..140470,140498..140500,140513..140515,
140579..140581,140588..140590,140624..140632,
140636..140638,140657..140659,140663..140665))
/gene="yadF"
/locus_tag="SF0123"
/note="active site clefts [active]"
/db_xref="CDD:238448"
misc_feature complement(order(140459..140461,140468..140470,
140630..140632,140636..140638))
/gene="yadF"
/locus_tag="SF0123"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:238448"
misc_feature complement(order(140198..140200,140204..140206,
140210..140215,140219..140221,140405..140407,
140513..140518,140525..140530,140570..140572,
140576..140578,140582..140590,140603..140605,
140609..140614,140618..140620,140624..140635))
/gene="yadF"
/locus_tag="SF0123"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238448"
gene 140870..141796
/gene="yadG"
/locus_tag="SF0124"
/db_xref="GeneID:1024521"
CDS 140870..141796
/gene="yadG"
/locus_tag="SF0124"
/note="Code: Q; COG: COG1131"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_706080.1"
/db_xref="GeneID:1024521"
/translation="MTIALELQQLKKNYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
SMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
misc_feature 140882..141568
/gene="yadG"
/locus_tag="SF0124"
/note="ABC-type multidrug transport system, ATPase
component [Defense mechanisms]; Region: CcmA; COG1131"
/db_xref="CDD:440746"
gene 141793..142563
/gene="yadH"
/locus_tag="SF0125"
/db_xref="GeneID:1024531"
CDS 141793..142563
/gene="yadH"
/locus_tag="SF0125"
/note="Code: R; COG: COG0842"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="NP_706081.1"
/db_xref="GeneID:1024531"
/translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
LGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS"
misc_feature 141793..142560
/gene="yadH"
/locus_tag="SF0125"
/note="inner membrane transport permease; Provisional;
Region: PRK15066"
/db_xref="CDD:237896"
gene 142668..143108
/gene="yadI"
/locus_tag="SF0126"
/db_xref="GeneID:1024515"
CDS 142668..143108
/gene="yadI"
/locus_tag="SF0126"
/note="Code: G; COG: COG2893"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIB"
/protein_id="NP_706082.1"
/db_xref="GeneID:1024515"
/translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA
CRETMTSSEFRECIVELGGPEVSSLWHQQQKNPPFVLKHNLYEY"
misc_feature 142677..143054
/gene="yadI"
/locus_tag="SF0126"
/note="Phosphotransferase system,
mannose/fructose-specific component IIA [Carbohydrate
transport and metabolism]; Region: ManX; COG2893"
/db_xref="CDD:442138"
gene 143172..144401
/gene="yadE"
/locus_tag="SF0127"
/db_xref="GeneID:1024508"
CDS 143172..144401
/gene="yadE"
/locus_tag="SF0127"
/note="Code: G; COG: COG0726"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706083.2"
/db_xref="GeneID:1024508"
/translation="MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQISDKMVT
VGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSN
QNLITWKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQ
LEGYVKNTINLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATVFIVTSRIKRHPQKW
NPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRA
LAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILR
TDSLEKMSRLVSNQPQG"
misc_feature 143859..144368
/gene="yadE"
/locus_tag="SF0127"
/note="Putative catalytic polysaccharide deacetylase
domain of uncharacterized protein yadE and similar
proteins; Region: CE4_yadE_5s; cd10966"
/db_xref="CDD:213024"
misc_feature order(143886..143891,144072..144074,144087..144089,
144213..144221)
/gene="yadE"
/locus_tag="SF0127"
/note="putative active site [active]"
/db_xref="CDD:213024"
gene complement(144405..144785)
/gene="panD"
/locus_tag="SF0128"
/db_xref="GeneID:1024489"
CDS complement(144405..144785)
/gene="panD"
/locus_tag="SF0128"
/note="Code: H; COG: COG0853"
/codon_start=1
/transl_table=11
/product="aspartate alpha-decarboxylase"
/protein_id="NP_706084.2"
/db_xref="GeneID:1024489"
/translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
PNVAYFEGDNEMKRTAKAIPVQVA"
misc_feature complement(144408..144785)
/gene="panD"
/locus_tag="SF0128"
/note="L-aspartate-alpha-decarboxylase; Region: panD;
TIGR00223"
/db_xref="CDD:129327"
misc_feature complement(order(144483..144485,144510..144518,
144528..144530,144552..144557,144561..144566,
144612..144626,144630..144632,144639..144641,
144645..144647,144657..144662,144669..144671,
144675..144677,144717..144728,144750..144755,
144759..144761,144765..144779))
/gene="panD"
/locus_tag="SF0128"
/note="tetramerization interface [polypeptide binding];
other site"
/db_xref="CDD:132994"
misc_feature complement(order(144612..144614,144711..144716,
144753..144755,144759..144761))
/gene="panD"
/locus_tag="SF0128"
/note="active site"
/db_xref="CDD:132994"
gene 145059..145961
/gene="yadD"
/locus_tag="SF0129"
/db_xref="GeneID:1027520"
CDS 145059..145961
/gene="yadD"
/locus_tag="SF0129"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706085.1"
/db_xref="GeneID:1027520"
/translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
HLESGSFIEECLKGHSTDVLYSMQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAM
HRHLEAGHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR
GHTEQADLFYGVLRDRETGGKSMMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKG
MSREDVAEMANLPLAEIDKVINLI"
misc_feature 145077..145682
/gene="yadD"
/locus_tag="SF0129"
/note="Putative transposase, YhgA-like; Region:
Transposase_31; pfam04754"
/db_xref="CDD:428107"
gene complement(146035..146886)
/gene="panC"
/locus_tag="SF0130"
/db_xref="GeneID:1024504"
CDS complement(146035..146886)
/gene="panC"
/locus_tag="SF0130"
/note="Code: H; COG: COG0414"
/codon_start=1
/transl_table=11
/product="pantoate--beta-alanine ligase"
/protein_id="NP_706086.1"
/db_xref="GeneID:1024504"
/translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHNGHMKLVDEA
KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
ERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
NKMVELA"
misc_feature complement(146044..146886)
/gene="panC"
/locus_tag="SF0130"
/note="Panthothenate synthetase [Coenzyme transport and
metabolism]; Region: PanC; COG0414"
/db_xref="CDD:440183"
gene complement(146898..147692)
/gene="panB"
/locus_tag="SF0131"
/db_xref="GeneID:1024497"
CDS complement(146898..147692)
/gene="panB"
/locus_tag="SF0131"
/note="Code: H; COG: COG0413"
/codon_start=1
/transl_table=11
/product="3-methyl-2-oxobutanoate
hydroxymethyltransferase"
/protein_id="NP_706087.1"
/db_xref="GeneID:1024497"
/translation="MKPTTIASLQKYKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
DSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAAT
VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGNEAS
DRLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA
FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
misc_feature complement(146907..147683)
/gene="panB"
/locus_tag="SF0131"
/note="Ketopantoate hydroxymethyltransferase [Coenzyme
transport and metabolism]; Region: PanB; COG0413"
/db_xref="CDD:440182"
mobile_element 148131..148898
/mobile_element_type="insertion sequence:IS1"
gene 148380..148883
/gene="insB"
/locus_tag="SF0133"
/db_xref="GeneID:1024492"
CDS 148380..148883
/gene="insB"
/locus_tag="SF0133"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706089.1"
/db_xref="GeneID:1024492"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 148488..148880
/gene="insB"
/locus_tag="SF0133"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(149031..149510)
/gene="folK"
/locus_tag="SF0134"
/db_xref="GeneID:1024464"
CDS complement(149031..149510)
/gene="folK"
/locus_tag="SF0134"
/note="Code: H; COG: COG0801"
/codon_start=1
/transl_table=11
/product="2-amino-4-hydroxy-6-
hydroxymethyldihydropteridine pyrophosphokinase"
/protein_id="NP_706090.1"
/db_xref="GeneID:1024464"
/translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESRILAVSSFYRTP
PLGPQDQPDYLNAAVALETSPAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLF
GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDKLSKW"
misc_feature complement(149034..149510)
/gene="folK"
/locus_tag="SF0134"
/note="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
diphosphokinase; Region: PRK10239"
/db_xref="CDD:182325"
misc_feature complement(order(149139..149141,149145..149147,
149160..149165,149172..149174,149214..149219,
149223..149225,149232..149234,149241..149243,
149256..149258,149262..149264,149277..149279,
149286..149288,149298..149300,149343..149345,
149349..149351,149373..149375,149379..149384,
149484..149486))
/gene="folK"
/locus_tag="SF0134"
/note="catalytic center binding site [active]"
/db_xref="CDD:238269"
misc_feature complement(order(149145..149147,149160..149165,
149172..149174,149214..149219,149232..149234,
149256..149258,149262..149264,149277..149279,
149286..149288,149298..149300))
/gene="folK"
/locus_tag="SF0134"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238269"
gene complement(149507..150871)
/gene="pcnB"
/locus_tag="SF0135"
/db_xref="GeneID:1024495"
CDS complement(149507..150871)
/gene="pcnB"
/locus_tag="SF0135"
/note="Code: J; COG: COG0617"
/codon_start=1
/transl_table=11
/product="poly(A) polymerase"
/protein_id="NP_706091.4"
/db_xref="GeneID:1024495"
/translation="MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRL
NKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYS
VADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAE
PIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENG
DSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAF
ALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDL
LALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRR
EGTT"
misc_feature complement(149573..150871)
/gene="pcnB"
/locus_tag="SF0135"
/note="poly(A) polymerase I; Provisional; Region: pcnB;
PRK11623"
/db_xref="CDD:236939"
gene complement(150964..151890)
/gene="yadB"
/locus_tag="SF0136"
/db_xref="GeneID:1024452"
CDS complement(150964..151890)
/gene="yadB"
/locus_tag="SF0136"
/note="Code: J; COG: COG0008"
/codon_start=1
/transl_table=11
/product="tRNA synthetase"
/protein_id="NP_706092.3"
/db_xref="GeneID:1024452"
/translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
HEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDLLRGII
HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQIPLYQLF
GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFS
VEQILQSAVKNWMLTAVPESAIVNSTFSNASC"
misc_feature complement(150982..151860)
/gene="yadB"
/locus_tag="SF0136"
/note="tRNA glutamyl-Q(34) synthetase GluQRS; Region:
PRK05710"
/db_xref="CDD:235573"
misc_feature complement(order(151168..151170,151795..151797,
151804..151806))
/gene="yadB"
/locus_tag="SF0136"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:173912"
misc_feature complement(151795..151806)
/gene="yadB"
/locus_tag="SF0136"
/note="HIGH motif; other site"
/db_xref="CDD:173912"
gene complement(151927..152382)
/gene="dksA"
/locus_tag="SF0137"
/db_xref="GeneID:1024482"
CDS complement(151927..152382)
/gene="dksA"
/locus_tag="SF0137"
/note="Code: T; COG: COG1734"
/codon_start=1
/transl_table=11
/product="RNA polymerase-binding transcription factor"
/protein_id="NP_706093.2"
/db_xref="GeneID:1024482"
/translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
misc_feature complement(151930..152382)
/gene="dksA"
/locus_tag="SF0137"
/note="RNA polymerase-binding protein DksA; Region: dksA;
PRK10778"
/db_xref="CDD:182722"
gene complement(152560..153264)
/gene="sfsA"
/locus_tag="SF0138"
/db_xref="GeneID:1024496"
CDS complement(152560..153264)
/gene="sfsA"
/locus_tag="SF0138"
/note="Code: G; COG: COG1489"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator"
/protein_id="NP_706094.1"
/db_xref="GeneID:1024496"
/translation="MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
ATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
GYSSLKSEVKYGSERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
ISAEGMALKKSLPVTL"
misc_feature complement(152563..153264)
/gene="sfsA"
/locus_tag="SF0138"
/note="DNA-binding protein, stimulates sugar fermentation
[Carbohydrate transport and metabolism, Signal
transduction mechanisms]; Region: SfsA; COG1489"
/db_xref="CDD:441098"
gene complement(153279..153818)
/gene="yadP"
/locus_tag="SF0139"
/db_xref="GeneID:1024485"
CDS complement(153279..153818)
/gene="yadP"
/locus_tag="SF0139"
/note="Code: J; COG: COG1514"
/codon_start=1
/transl_table=11
/product="2'-5' RNA ligase"
/protein_id="NP_706095.1"
/db_xref="GeneID:1024485"
/translation="MPHMSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADN
LHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGL
IQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTFPPPGFNWSYAVTEFTLYAS
SFARGRTRYTPLKRWALTQ"
misc_feature complement(153282..153809)
/gene="yadP"
/locus_tag="SF0139"
/note="RNA 2',3'-cyclic phosphodiesterase; Region:
PRK15124"
/db_xref="CDD:185079"
gene 153838..156312
/gene="hrpB"
/locus_tag="SF0140"
/db_xref="GeneID:1024462"
CDS 153838..156312
/gene="hrpB"
/locus_tag="SF0140"
/note="Code: L; COG: COG1643"
/codon_start=1
/transl_table=11
/product="ATP-dependent RNA helicase HrpB"
/protein_id="NP_706096.1"
/db_xref="GeneID:1024462"
/translation="MLQCGAKNVNPLERFVSSLPVAAVLPELLTALDCAPQVLLSAPT
GAGKSTWLPLQLLAHPGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQ
NCVGLNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQG
LRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDEAVAVA
TAEMVRQESGSLLLFLPGVGEIQRVQEQLASRIGSDVVLCPLYGVLSLNDQRKAILPA
PQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQ
RAGRAGRLEPGISLHLIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSW
LDQPPTVNLLAAKRLLQMLGALEGERLSAQGQKMAALGNDPRLAAMLVNAKSDDEAAT
AAKIAAILEEPPRMGNSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLA
GAFADRIAHRRGQDGRYQLANSMGAMLDADDALSRHEWLIAPLLLQGSASPDARILLA
LPVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELH
QAMLNGIRDKGLSVLNWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLP
HMTGVHSLRGLKSLDIYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPP
ALAVRMQEMFGEATNPTIAQGRVPLVLKLLSPAQRPLQITRDLGAFWKGAYREVQKEM
KGRYPKHVWPDDPANTAPTRRTKKYS"
misc_feature 153883..156309
/gene="hrpB"
/locus_tag="SF0140"
/note="ATP-dependent RNA helicase HrpB; Provisional;
Region: PRK11664"
/db_xref="CDD:236950"
gene 156508..159042
/gene="mrcB"
/locus_tag="SF0141"
/db_xref="GeneID:1024458"
CDS 156508..159042
/gene="mrcB"
/locus_tag="SF0141"
/note="Code: M; COG: COG0744"
/codon_start=1
/transl_table=11
/product="bifunctional glycosyl
transferase/transpeptidase"
/protein_id="NP_706097.2"
/db_xref="GeneID:1024458"
/translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL
PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
FPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLV
DALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAM
SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQSE
MQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
misc_feature 156508..159036
/gene="mrcB"
/locus_tag="SF0141"
/note="bifunctional glycosyl transferase/transpeptidase;
Reviewed; Region: mrcB; PRK09506"
/db_xref="CDD:236544"
gene 159262..161505
/gene="fhuA"
/locus_tag="SF0142"
/db_xref="GeneID:1024465"
CDS 159262..161505
/gene="fhuA"
/locus_tag="SF0142"
/note="Code: P; COG: COG1629"
/codon_start=1
/transl_table=11
/product="ferrichrome outer membrane transporter"
/protein_id="NP_706098.1"
/db_xref="GeneID:1024465"
/translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
TAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEA
LSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE
RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALD
DDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGY
YGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLR
FAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDT
QLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLFNLYNPVNPDFDFNAKDP
ANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQ
FTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRP
IVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYT
DAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS
FKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVV
ATATFRF"
misc_feature 159262..161502
/gene="fhuA"
/locus_tag="SF0142"
/note="ferrichrome outer membrane transporter;
Provisional; Region: PRK10044"
/db_xref="CDD:236643"
gene 161556..162353
/gene="fhuC"
/locus_tag="SF0143"
/db_xref="GeneID:1027521"
CDS 161556..162353
/gene="fhuC"
/locus_tag="SF0143"
/note="Code: PH; COG: COG1120"
/codon_start=1
/transl_table=11
/product="iron-hydroxamate ABC transporter ATP-binding
protein"
/protein_id="NP_706099.2"
/db_xref="GeneID:1027521"
/translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
HNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV
RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYL
VALRSGEMIAQGTPAEIMRGETLEMIYGIPMGILPHPAGAAPVSFVY"
misc_feature 161556..162350
/gene="fhuC"
/locus_tag="SF0143"
/note="Fe3+-hydroxamate ABC transporter ATP-binding
protein FhuC; Region: PRK10575"
/db_xref="CDD:182561"
gene 162353..163243
/gene="fhuD"
/locus_tag="SF0144"
/db_xref="GeneID:1024459"
CDS 162353..163243
/gene="fhuD"
/locus_tag="SF0144"
/note="Code: P; COG: COG0614"
/codon_start=1
/transl_table=11
/product="iron-hydroxamate ABC transporter
substrate-binding protein"
/protein_id="NP_706100.2"
/db_xref="GeneID:1024459"
/translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL
PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
SAGYGPSSEMLARIAPGRGFNFSDGKHPLAMARKSLTEMADLLNLQSAAETHLAQYED
FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRTGRFQRVPAVWFYG
ATLSAMHFVRVLDNAIGGKA"
misc_feature 162362..163237
/gene="fhuD"
/locus_tag="SF0144"
/note="Fe(3+)-hydroxamate ABC transporter
substrate-binding protein FhuD; Region: PRK10576"
/db_xref="CDD:236719"
misc_feature order(162554..162556,162602..162607,162668..162670,
162917..162919)
/gene="fhuD"
/locus_tag="SF0144"
/note="siderophore binding site [active]"
/db_xref="CDD:238566"
gene 163240..165222
/gene="fhuB"
/locus_tag="SF0145"
/db_xref="GeneID:1025959"
CDS 163240..165222
/gene="fhuB"
/locus_tag="SF0145"
/note="Code: PH; COG: COG0609"
/codon_start=1
/transl_table=11
/product="iron-hydroxamate ABC transporter permease"
/protein_id="NP_706101.1"
/db_xref="GeneID:1025959"
/translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
ITVTTLWAIPSAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLIFAGLVVSLYCGAI
NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR
LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
KVNDRVATERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDLMPWRWP
RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
LPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
LTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTR
IALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR"
misc_feature 163240..165219
/gene="fhuB"
/locus_tag="SF0145"
/note="Fe(3+)-hydroxamate ABC transporter permease FhuB;
Region: PRK10577"
/db_xref="CDD:236720"
misc_feature order(164473..164475,164485..164493,164854..164859,
164863..164871,164875..164880,164884..164901,
164905..164913,165034..165036,165055..165057)
/gene="fhuB"
/locus_tag="SF0145"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119348"
misc_feature order(164488..164490,164494..164496,164509..164511,
164671..164673,164677..164682,164689..164694,
164701..164706,164713..164715,164722..164727,
164731..164733,164764..164769,164776..164778,
165004..165006,165160..165162,165169..165174,
165181..165183,165190..165195,165202..165204)
/gene="fhuB"
/locus_tag="SF0145"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature order(164731..164733,164806..164808,164980..164982,
164992..164994,165124..165126,165151..165153)
/gene="fhuB"
/locus_tag="SF0145"
/note="putative PBP binding regions [active]"
/db_xref="CDD:119348"
gene complement(165257..166537)
/gene="hemL"
/locus_tag="SF0146"
/db_xref="GeneID:1024471"
CDS complement(165257..166537)
/gene="hemL"
/locus_tag="SF0146"
/note="Code: H; COG: COG0001"
/codon_start=1
/transl_table=11
/product="glutamate-1-semialdehyde aminotransferase"
/protein_id="NP_706102.1"
/db_xref="GeneID:1024471"
/translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYL
YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPE
FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYFAVVPDLTCLGKIIGGGMPVGAF
GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGIHETLDELTTRLAEG
LLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
misc_feature complement(165260..166537)
/gene="hemL"
/locus_tag="SF0146"
/note="glutamate-1-semialdehyde 2,1-aminomutase; Region:
PRK00062"
/db_xref="CDD:234607"
misc_feature complement(order(165743..165745,165818..165823,
165827..165829,165926..165928,166103..166105,
166109..166114,166190..166198))
/gene="hemL"
/locus_tag="SF0146"
/note="inhibitor-cofactor binding pocket [active]"
/db_xref="CDD:99735"
misc_feature complement(order(165743..165745,165818..165820,
165827..165829,165926..165928,166109..166114,
166190..166195))
/gene="hemL"
/locus_tag="SF0146"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature complement(165743..165745)
/gene="hemL"
/locus_tag="SF0146"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene 166762..168183
/gene="yadQ"
/locus_tag="SF0147"
/db_xref="GeneID:1024457"
CDS 166762..168183
/gene="yadQ"
/locus_tag="SF0147"
/note="Code: P; COG: COG0038"
/codon_start=1
/transl_table=11
/product="chloride channel protein"
/protein_id="NP_706103.1"
/db_xref="GeneID:1024457"
/translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMGLGREGPTVQIGGNISR
MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM
QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIA
GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILA
RTLAKQEAEQLARSKAASASENT"
misc_feature 166867..168180
/gene="yadQ"
/locus_tag="SF0147"
/note="H(+)/Cl(-) exchange transporter ClcA; Region:
PRK05277"
/db_xref="CDD:235385"
misc_feature order(167077..167091,167197..167211,167824..167838,
168094..168096)
/gene="yadQ"
/locus_tag="SF0147"
/note="Cl- selectivity filter [active]"
/db_xref="CDD:238504"
misc_feature order(167080..167082,167086..167088,167203..167208,
167824..167832,168094..168096)
/gene="yadQ"
/locus_tag="SF0147"
/note="Cl- binding residues [ion binding]; other site"
/db_xref="CDD:238504"
misc_feature 167203..167205
/gene="yadQ"
/locus_tag="SF0147"
/note="pore gating glutamate residue [active]"
/db_xref="CDD:238504"
misc_feature order(167341..167343,167368..167370,167407..167409,
167428..167430,167968..167970,167977..167979,
168001..168003,168037..168039,168058..168063,
168070..168072)
/gene="yadQ"
/locus_tag="SF0147"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238504"
misc_feature 167368..167370
/gene="yadQ"
/locus_tag="SF0147"
/note="H+/Cl- coupling transport residue [active]"
/db_xref="CDD:238504"
gene 168265..168609
/gene="yadR"
/locus_tag="SF0148"
/db_xref="GeneID:1024461"
CDS 168265..168609
/gene="yadR"
/locus_tag="SF0148"
/note="Code: S; COG: COG0316"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster insertion protein ErpA"
/protein_id="NP_706104.2"
/db_xref="GeneID:1024461"
/translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
KSTCGCGSSFSI"
misc_feature 168265..168606
/gene="yadR"
/locus_tag="SF0148"
/note="iron-sulfur cluster insertion protein ErpA;
Provisional; Region: PRK13623"
/db_xref="CDD:184186"
gene complement(168656..169279)
/gene="yadS"
/locus_tag="SF0149"
/db_xref="GeneID:1024467"
CDS complement(168656..169279)
/gene="yadS"
/locus_tag="SF0149"
/note="Code: S; COG: COG2860"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706105.1"
/db_xref="GeneID:1024467"
/translation="MLVYWLDIVGTAVFAIYGVLLAGKLRMDPFGVLVLGVVTAVGDG
TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
GISVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLVREIPMILRTEIYATACIIGGIV
HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
misc_feature complement(168659..169279)
/gene="yadS"
/locus_tag="SF0149"
/note="hypothetical protein; Provisional; Region:
PRK10578"
/db_xref="CDD:182564"
gene complement(169317..170117)
/gene="yadT"
/locus_tag="SF0150"
/db_xref="GeneID:1024500"
CDS complement(169317..170117)
/gene="yadT"
/locus_tag="SF0150"
/note="Code: P; COG: COG0614"
/codon_start=1
/transl_table=11
/product="vitamin B12-transporter protein BtuF"
/protein_id="NP_706106.1"
/db_xref="GeneID:1024500"
/translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP
VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGI
KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYVQLKAQYADKPKKRVFL
QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP
DQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD"
misc_feature complement(169320..170099)
/gene="yadT"
/locus_tag="SF0150"
/note="vitamin B12-transporter protein BtuF; Provisional;
Region: PRK03379"
/db_xref="CDD:179575"
misc_feature complement(order(169530..169532,169614..169616,
169857..169859,169863..169865,169968..169970,
170022..170027))
/gene="yadT"
/locus_tag="SF0150"
/note="cobalamin binding residues [chemical binding];
other site"
/db_xref="CDD:238564"
misc_feature complement(order(169512..169514,169902..169904))
/gene="yadT"
/locus_tag="SF0150"
/note="putative BtuC binding residues [active]"
/db_xref="CDD:238564"
misc_feature complement(order(169755..169760,169767..169769,
169776..169781,169785..169787,169794..169796,
169806..169808,169824..169826,169833..169835,
169860..169862))
/gene="yadT"
/locus_tag="SF0150"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238564"
gene complement(170110..170808)
/gene="pfs"
/locus_tag="SF0151"
/db_xref="GeneID:1024491"
CDS complement(170110..170808)
/gene="pfs"
/locus_tag="SF0151"
/note="Code: F; COG: COG0775"
/codon_start=1
/transl_table=11
/product="5'-methylthioadenosine/S-adenosylhomocysteine
nucleosidase"
/protein_id="NP_706107.1"
/db_xref="GeneID:1024491"
/translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
SLMVESLVQKLAHG"
misc_feature complement(170119..170808)
/gene="pfs"
/locus_tag="SF0151"
/note="5'-methylthioadenosine/adenosylhomocysteine
nucleosidase; Region: PRK05584"
/db_xref="CDD:180148"
misc_feature complement(order(170173..170175,170212..170214,
170218..170223,170230..170232,170287..170298,
170356..170361,170575..170583,170656..170661,
170773..170775,170782..170787))
/gene="pfs"
/locus_tag="SF0151"
/note="active site"
/db_xref="CDD:350159"
misc_feature complement(order(170251..170262,170266..170271,
170278..170280,170290..170292,170356..170364,
170512..170514,170518..170520,170614..170622,
170626..170631,170638..170643,170647..170664,
170668..170670,170716..170718,170779..170781))
/gene="pfs"
/locus_tag="SF0151"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:350159"
gene 170892..172277
/locus_tag="SF0152"
/pseudogene="unknown"
/db_xref="GeneID:1024476"
gene 172543..173967
/gene="htrA"
/locus_tag="SF0153"
/db_xref="GeneID:1024488"
CDS 172543..173967
/gene="htrA"
/locus_tag="SF0153"
/note="Code: O; COG: COG0265"
/codon_start=1
/transl_table=11
/product="serine endoprotease"
/protein_id="NP_706109.1"
/db_xref="GeneID:1024488"
/translation="MKKNTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
DIALIQIQNPKKLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
LDSKPSVLALNIQRGDSTIYLLMQ"
misc_feature 172603..173964
/gene="htrA"
/locus_tag="SF0153"
/note="serine endoprotease DegP; Region: PRK10942"
/db_xref="CDD:236802"
gene 174104..175278
/gene="yaeG"
/locus_tag="SF0154"
/pseudo
/db_xref="GeneID:1024447"
misc_feature 174104..175278
/gene="yaeG"
/locus_tag="SF0154"
/note="'Similar to Escherichia coli O157:H7 regulator
protein of D-galactarate, D-glucarate and D-glycerate
metabolism ref: NP_308193.1 (385 aa). BLAST with identity
of 99% in 392 aa. This CDS contains an in-frame stop
codon. The sequence has been checked and is believed to be
correct.'"
/pseudo
gene complement(175367..175753)
/gene="yaeH"
/locus_tag="SF0155"
/db_xref="GeneID:1025961"
CDS complement(175367..175753)
/gene="yaeH"
/locus_tag="SF0155"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706110.1"
/db_xref="GeneID:1025961"
/translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
DLRHLESVVTNKISEIEADLEKLTRK"
misc_feature complement(175379..175753)
/gene="yaeH"
/locus_tag="SF0155"
/note="DUF3461 family protein; Region: PRK13677"
/db_xref="CDD:184234"
gene complement(176067..176891)
/gene="dapD"
/locus_tag="SF0156"
/db_xref="GeneID:1024466"
CDS complement(176067..176891)
/gene="dapD"
/locus_tag="SF0156"
/note="Code: E; COG: COG2171"
/codon_start=1
/transl_table=11
/product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
N-succinyltransferase"
/protein_id="NP_706111.1"
/db_xref="GeneID:1024466"
/translation="MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALR
VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
TGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
misc_feature complement(176079..176891)
/gene="dapD"
/locus_tag="SF0156"
/note="2,3,4,5-tetrahydropyridine-2,6-carboxylate
N-succinyltransferase; Provisional; Region: dapD;
PRK11830"
/db_xref="CDD:236996"
gene complement(176922..179594)
/gene="glnD"
/locus_tag="SF0157"
/db_xref="GeneID:1024456"
CDS complement(176922..179594)
/gene="glnD"
/locus_tag="SF0157"
/note="Code: O; COG: COG2844"
/codon_start=1
/transl_table=11
/product="PII uridylyl-transferase"
/protein_id="NP_706112.1"
/db_xref="GeneID:1024456"
/translation="MNTLPEQYANTALSTLPGQPQNPCAWPRDELTVCGIKAHIDTFQ
RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
DEAILALPADEKPRPLDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
YSTTLRQLRHARRHLQQPLCNIPQARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
misc_feature complement(176925..179576)
/gene="glnD"
/locus_tag="SF0157"
/note="bifunctional uridylyltransferase/uridylyl-removing
protein GlnD; Region: PRK05007"
/db_xref="CDD:235329"
gene complement(179656..180450)
/gene="map"
/locus_tag="SF0158"
/db_xref="GeneID:1024468"
CDS complement(179656..180450)
/gene="map"
/locus_tag="SF0158"
/note="Code: J; COG: COG0024"
/codon_start=1
/transl_table=11
/product="methionine aminopeptidase"
/protein_id="NP_706113.1"
/db_xref="GeneID:1024468"
/translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
misc_feature complement(179689..180450)
/gene="map"
/locus_tag="SF0158"
/note="methionine aminopeptidase; Validated; Region:
PRK05716"
/db_xref="CDD:235576"
misc_feature complement(order(179746..179748,179839..179841,
179938..179940,180127..180129,180160..180162,
180214..180216))
/gene="map"
/locus_tag="SF0158"
/note="active site"
/db_xref="CDD:238519"
gene 180818..181543
/gene="rpsB"
/locus_tag="SF0159"
/db_xref="GeneID:1024473"
CDS 180818..181543
/gene="rpsB"
/locus_tag="SF0159"
/note="Code: J; COG: COG0052"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S2"
/protein_id="NP_706114.2"
/db_xref="GeneID:1024473"
/translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
KTVPMFNEALAELNKIVSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
NWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
ATVREGRSQDLASQAEESFVEAE"
misc_feature 180818..181540
/gene="rpsB"
/locus_tag="SF0159"
/note="30S ribosomal protein S2; Provisional; Region:
rpsB; PRK05299"
/db_xref="CDD:235396"
misc_feature order(180890..180895,180920..180928,181100..181102,
181106..181114,181121..181126,181340..181342,
181349..181351)
/gene="rpsB"
/locus_tag="SF0159"
/note="rRNA interaction site [nucleotide binding]; other
site"
/db_xref="CDD:100106"
misc_feature order(181346..181351,181355..181357,181397..181408)
/gene="rpsB"
/locus_tag="SF0159"
/note="S8 interaction site [active]"
/db_xref="CDD:100106"
misc_feature 181451..181468
/gene="rpsB"
/locus_tag="SF0159"
/note="putative laminin-1 binding site [active]"
/db_xref="CDD:100106"
gene 181801..182652
/gene="tsf"
/locus_tag="SF0160"
/db_xref="GeneID:1024436"
CDS 181801..182652
/gene="tsf"
/locus_tag="SF0160"
/note="Code: J; COG: COG0264"
/codon_start=1
/transl_table=11
/product="elongation factor Ts"
/protein_id="NP_706115.1"
/db_xref="GeneID:1024436"
/translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
AAMSKQS"
misc_feature 181804..182646
/gene="tsf"
/locus_tag="SF0160"
/note="Translation elongation factor EF-Ts [Translation,
ribosomal structure and biogenesis]; Region: Tsf; COG0264"
/db_xref="CDD:440034"
gene 182799..183524
/gene="pyrH"
/locus_tag="SF0161"
/db_xref="GeneID:1024474"
CDS 182799..183524
/gene="pyrH"
/locus_tag="SF0161"
/note="Code: F; COG: COG0528"
/codon_start=1
/transl_table=11
/product="uridylate kinase"
/protein_id="NP_706116.1"
/db_xref="GeneID:1024474"
/translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
NMNKPGALRRVVMGEKEGTLITE"
misc_feature 182811..183521
/gene="pyrH"
/locus_tag="SF0161"
/note="Uridylate kinase [Nucleotide transport and
metabolism]; Region: PyrH; COG0528"
/db_xref="CDD:440294"
gene 183816..184373
/gene="frr"
/locus_tag="SF0162"
/db_xref="GeneID:1024426"
CDS 183816..184373
/gene="frr"
/locus_tag="SF0162"
/note="Code: J; COG: COG0233"
/codon_start=1
/transl_table=11
/product="ribosome recycling factor"
/protein_id="NP_706117.1"
/db_xref="GeneID:1024426"
/translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
QKLTDAAIKKIEAALADKEAELMQF"
misc_feature 183816..184370
/gene="frr"
/locus_tag="SF0162"
/note="Ribosome recycling factor [Translation, ribosomal
structure and biogenesis]; Region: Frr; COG0233"
/db_xref="CDD:440003"
misc_feature order(183900..183911,184119..184130)
/gene="frr"
/locus_tag="SF0162"
/note="hinge region; other site"
/db_xref="CDD:238288"
gene 184465..185661
/gene="yaeM"
/locus_tag="SF0163"
/db_xref="GeneID:1024469"
CDS 184465..185661
/gene="yaeM"
/locus_tag="SF0163"
/note="Code: I; COG: COG0743"
/codon_start=1
/transl_table=11
/product="1-deoxy-D-xylulose 5-phosphate reductoisomerase"
/protein_id="NP_706118.1"
/db_xref="GeneID:1024469"
/translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEEVDQVMAAIV
GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYERYPCLKLAMEAFEQGQAATTA
LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANASEVARKE
VMRLAS"
misc_feature 184465..185658
/gene="yaeM"
/locus_tag="SF0163"
/note="1-deoxy-D-xylulose 5-phosphate reductoisomerase;
Provisional; Region: PRK05447"
/db_xref="CDD:235472"
gene 185847..186608
/gene="yaeS"
/locus_tag="SF0164"
/db_xref="GeneID:1024481"
CDS 185847..186608
/gene="yaeS"
/locus_tag="SF0164"
/note="Code: I; COG: COG0020"
/codon_start=1
/transl_table=11
/product="undecaprenyl pyrophosphate synthase"
/protein_id="NP_706119.1"
/db_xref="GeneID:1024481"
/translation="MMLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHK
AGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHR
HNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAE
KVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTD
VLWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
misc_feature 185919..186605
/gene="yaeS"
/locus_tag="SF0164"
/note="(2E,6E)-farnesyl-diphosphate-specific
ditrans,polycis-undecaprenyl-diphosphate synthase; Region:
PRK10240"
/db_xref="CDD:182326"
misc_feature order(185919..185936,185961..185963,185973..185975,
185985..185987,185994..185996,186051..186053,
186075..186077,186087..186089,186108..186113,
186120..186122,186267..186269,186426..186428,
186444..186446,186450..186452)
/gene="yaeS"
/locus_tag="SF0164"
/note="active site"
/db_xref="CDD:259850"
misc_feature order(186288..186293,186297..186302,186309..186314,
186360..186368,186375..186377,186408..186410,
186441..186455,186462..186470,186474..186488,
186492..186494)
/gene="yaeS"
/locus_tag="SF0164"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:259850"
gene 186729..187478
/gene="cdsA"
/locus_tag="SF0165"
/db_xref="GeneID:1024478"
CDS 186729..187478
/gene="cdsA"
/locus_tag="SF0165"
/note="Code: I; COG: COG0575"
/codon_start=1
/transl_table=11
/product="CDP-diglyceride synthetase"
/protein_id="NP_706120.4"
/db_xref="GeneID:1024478"
/translation="MLAAWEWGQLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNI
HQPLVEISLWASLGWWIVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLAL
RAWHYDENHYSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGG
LATAAVISWGYGMWANLDVAPVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLI
PGHGGILDRIDSLTAAVPVFACLLLLVFRTL"
misc_feature 186729..187475
/gene="cdsA"
/locus_tag="SF0165"
/note="phosphatidate cytidylyltransferase; Region: cdsA;
PRK11624"
/db_xref="CDD:183240"
gene 187490..188842
/gene="yaeL"
/locus_tag="SF0166"
/db_xref="GeneID:1024451"
CDS 187490..188842
/gene="yaeL"
/locus_tag="SF0166"
/note="Code: M; COG: COG0750"
/codon_start=1
/transl_table=11
/product="zinc metallopeptidase RseP"
/protein_id="NP_706121.2"
/db_xref="GeneID:1024451"
/translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA
AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP
DWDAVRLQLVDKIGDESTTITVAPFDSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR
GPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
INLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
"
misc_feature 187493..188839
/gene="yaeL"
/locus_tag="SF0166"
/note="sigma E protease regulator RseP; Region: PRK10779"
/db_xref="CDD:182723"
gene 188872..191304
/gene="yaeT"
/locus_tag="SF0167"
/db_xref="GeneID:1024444"
CDS 188872..191304
/gene="yaeT"
/locus_tag="SF0167"
/note="Code: M; COG: COG0729"
/codon_start=1
/transl_table=11
/product="outer membrane protein assembly factor YaeT"
/protein_id="NP_706122.1"
/db_xref="GeneID:1024444"
/translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
AEQFQFNIGKTW"
misc_feature 188872..191301
/gene="yaeT"
/locus_tag="SF0167"
/note="outer membrane protein assembly factor YaeT;
Provisional; Region: PRK11067"
/db_xref="CDD:236834"
gene 191426..191911
/gene="hlpA"
/locus_tag="SF0168"
/db_xref="GeneID:1024435"
CDS 191426..191911
/gene="hlpA"
/locus_tag="SF0168"
/note="Code: M; COG: COG2825"
/codon_start=1
/transl_table=11
/product="periplasmic chaperone"
/protein_id="NP_706123.1"
/db_xref="GeneID:1024435"
/translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
K"
misc_feature 191426..191908
/gene="hlpA"
/locus_tag="SF0168"
/note="molecular chaperone Skp; Region: PRK10780"
/db_xref="CDD:182724"
gene 191915..192940
/gene="lpxD"
/locus_tag="SF0169"
/db_xref="GeneID:1024439"
CDS 191915..192940
/gene="lpxD"
/locus_tag="SF0169"
/note="Code: M; COG: COG1044"
/codon_start=1
/transl_table=11
/product="UDP-3-O-[3-hydroxymyristoyl] glucosamine
N-acyltransferase"
/protein_id="NP_706124.1"
/db_xref="GeneID:1024439"
/translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
RKVNQQD"
misc_feature 191918..192934
/gene="lpxD"
/locus_tag="SF0169"
/note="UDP-3-O-[3-hydroxymyristoyl] glucosamine
N-acyltransferase; Provisional; Region: lpxD; PRK00892"
/db_xref="CDD:234858"
gene 193045..193500
/gene="fabZ"
/locus_tag="SF0170"
/db_xref="GeneID:1024429"
CDS 193045..193500
/gene="fabZ"
/locus_tag="SF0170"
/note="Code: I; COG: COG0764"
/codon_start=1
/transl_table=11
/product="(3R)-hydroxymyristoyl-ACP dehydratase"
/protein_id="NP_706125.2"
/db_xref="GeneID:1024429"
/translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
misc_feature 193048..193494
/gene="fabZ"
/locus_tag="SF0170"
/note="3-hydroxyacyl-ACP dehydratase FabZ; Region: fabZ;
PRK00006"
/db_xref="CDD:234568"
gene 193504..194292
/gene="lpxA"
/locus_tag="SF0171"
/db_xref="GeneID:1027519"
CDS 193504..194292
/gene="lpxA"
/locus_tag="SF0171"
/note="Code: M; COG: COG1043"
/codon_start=1
/transl_table=11
/product="acyl-[acyl-carrier-protein]--UDP-N-
acetylglucosamine O-acyltransferase"
/protein_id="NP_706126.1"
/db_xref="GeneID:1027519"
/translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL
KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR"
misc_feature 193513..194289
/gene="lpxA"
/locus_tag="SF0171"
/note="acyl-ACP--UDP-N-acetylglucosamine
O-acyltransferase; Region: PRK05289"
/db_xref="CDD:235390"
gene 194292..195440
/gene="lpxB"
/locus_tag="SF0172"
/db_xref="GeneID:1024463"
CDS 194292..195440
/gene="lpxB"
/locus_tag="SF0172"
/note="Code: M; COG: COG0763"
/codon_start=1
/transl_table=11
/product="lipid-A-disaccharide synthase"
/protein_id="NP_706127.2"
/db_xref="GeneID:1024463"
/translation="MTDQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF
NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
CRFIGHTMADAMPLDPDKNGARDVLGIPYDAHCLALLPGSRGAEVEMLSADFLKTAQL
LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLASG
TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
QKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
misc_feature 194292..195431
/gene="lpxB"
/locus_tag="SF0172"
/note="lipid-A-disaccharide synthase; Region: lpxB;
TIGR00215"
/db_xref="CDD:129319"
gene 195437..196033
/gene="rnhB"
/locus_tag="SF0173"
/db_xref="GeneID:1024448"
CDS 195437..196033
/gene="rnhB"
/locus_tag="SF0173"
/note="Code: L; COG: COG0164"
/codon_start=1
/transl_table=11
/product="ribonuclease HII"
/protein_id="NP_706128.1"
/db_xref="GeneID:1024448"
/translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
DSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
QHKGYPTAFHLEKLAEYGATEHHRRSFGPVKRALGLAS"
misc_feature 195464..196018
/gene="rnhB"
/locus_tag="SF0173"
/note="Ribonuclease HII [Replication, recombination and
repair]; Region: RnhB; COG0164"
/db_xref="CDD:439934"
gene 196070..199552
/gene="dnaE"
/locus_tag="SF0174"
/db_xref="GeneID:1024450"
CDS 196070..199552
/gene="dnaE"
/locus_tag="SF0174"
/note="Code: L; COG: COG0587"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit alpha"
/protein_id="NP_706129.1"
/db_xref="GeneID:1024450"
/translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLALLIS
KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQ
MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKSVLEPTYG
IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAEL
AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK
AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISL
TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
RGLIGSEQVELEFD"
misc_feature 196082..199522
/gene="dnaE"
/locus_tag="SF0174"
/note="DNA polymerase III subunit alpha; Validated;
Region: dnaE; PRK05673"
/db_xref="CDD:235554"
gene 199565..200524
/gene="accA"
/locus_tag="SF0175"
/db_xref="GeneID:1024428"
CDS 199565..200524
/gene="accA"
/locus_tag="SF0175"
/note="Code: I; COG: COG0825"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase carboxyltransferase
subunit alpha"
/protein_id="NP_706130.1"
/db_xref="GeneID:1024428"
/translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
misc_feature 199574..200518
/gene="accA"
/locus_tag="SF0175"
/note="Acetyl-CoA carboxylase alpha subunit [Lipid
transport and metabolism]; Region: AccA; COG0825"
/db_xref="CDD:440587"
gene 200623..202764
/gene="ldcC"
/locus_tag="SF0176"
/db_xref="GeneID:1024434"
CDS 200623..202764
/gene="ldcC"
/locus_tag="SF0176"
/note="Code: E; COG: COG1982"
/codon_start=1
/transl_table=11
/product="lysine decarboxylase LdcC"
/protein_id="NP_706131.1"
/db_xref="GeneID:1024434"
/translation="MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLK
FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWF
FEYALGQAEDIAIRMRQYTNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQK
SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTN
GISTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIP
RREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWV
PYTHFHPIYQGKSGMSGERVAGKVFFETQSTHKMLAALSQASLIHIKGEYDEEAFNEA
FMMHTTTSPSYPIVASVKTAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWF
FDIWQPPQVDEAECRPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG
IPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRI
KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLSGLMLRAFDTLPEMIMTPHQAW
QRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSV
GQHYPGFETDIHGAKQDEDGVYRVRVLKMAG"
misc_feature 200623..202761
/gene="ldcC"
/locus_tag="SF0176"
/note="lysine decarboxylase; Region: PRK15399"
/db_xref="CDD:185297"
gene 202794..203210
/gene="yaeR"
/locus_tag="SF0177"
/db_xref="GeneID:1024432"
CDS 202794..203210
/gene="yaeR"
/locus_tag="SF0177"
/note="Code: E; COG: COG0346"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706132.3"
/db_xref="GeneID:1024432"
/translation="MLLTNKGDVMLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSE
VYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHL
ESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYEQ"
misc_feature 202821..203207
/gene="yaeR"
/locus_tag="SF0177"
/note="VOC family protein; Region: PRK11478"
/db_xref="CDD:183156"
gene 203275..204573
/gene="tilS"
/locus_tag="SF0178"
/db_xref="GeneID:1025964"
CDS 203275..204573
/gene="tilS"
/locus_tag="SF0178"
/note="Code: D; COG: COG0037"
/codon_start=1
/transl_table=11
/product="tRNA(Ile)-lysidine synthetase"
/protein_id="NP_706133.1"
/db_xref="GeneID:1025964"
/translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR
GELEQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSATLCAE
QESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV
RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSITGQSETIVLWQTWLQPLELPA
GLGTVQLTAGGDIRPPRADEAVSVRFKAPGLLHIVGRNGGRKLKKIWQELGVPPWLRD
TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
misc_feature 203275..204570
/gene="tilS"
/locus_tag="SF0178"
/note="tRNA(Ile)-lysidine synthetase; Provisional; Region:
tilS; PRK10660"
/db_xref="CDD:182626"
gene complement(204622..204882)
/gene="yaeO"
/locus_tag="SF0179"
/db_xref="GeneID:1024472"
CDS complement(204622..204882)
/gene="yaeO"
/locus_tag="SF0179"
/codon_start=1
/transl_table=11
/product="Rho-binding antiterminator"
/protein_id="NP_706134.1"
/db_xref="GeneID:1024472"
/translation="MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES"
misc_feature complement(204625..204876)
/gene="yaeO"
/locus_tag="SF0179"
/note="Rho-binding antiterminator; Provisional; Region:
PRK11625"
/db_xref="CDD:183241"
gene complement(204869..205087)
/gene="yaeP"
/locus_tag="SF0180"
/db_xref="GeneID:1024470"
CDS complement(204869..205087)
/gene="yaeP"
/locus_tag="SF0180"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706135.1"
/db_xref="GeneID:1024470"
/translation="MLTGGHVEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMA
ADDALSEAVREKAAYAAANLLVSDYVNE"
misc_feature complement(204872..205069)
/gene="yaeP"
/locus_tag="SF0180"
/note="hypothetical protein; Provisional; Region:
PRK04964"
/db_xref="CDD:179901"
gene 205235..205780
/gene="yaeQ"
/locus_tag="SF0181"
/db_xref="GeneID:1024443"
CDS 205235..205780
/gene="yaeQ"
/locus_tag="SF0181"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706136.1"
/db_xref="GeneID:1024443"
/translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL
LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV
ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV
IWLSDDKNNLEVNLTAWQQPS"
misc_feature 205238..205774
/gene="yaeQ"
/locus_tag="SF0181"
/note="Uncharacterized conserved protein YaeQ, suppresses
RfaH defect [Function unknown]; Region: YaeQ; COG4681"
/db_xref="CDD:443717"
gene 205777..206199
/gene="yaeJ"
/locus_tag="SF0182"
/db_xref="GeneID:1025965"
CDS 205777..206199
/gene="yaeJ"
/locus_tag="SF0182"
/note="Code: J; COG: COG1186"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706137.1"
/db_xref="GeneID:1025965"
/translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR
ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTKEQ
KARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE"
misc_feature 205777..206184
/gene="yaeJ"
/locus_tag="SF0182"
/note="aminoacyl-tRNA hydrolase; Region: PRK09256"
/db_xref="CDD:181730"
gene 206213..206923
/gene="cutF"
/locus_tag="SF0183"
/db_xref="GeneID:1027537"
CDS 206213..206923
/gene="cutF"
/locus_tag="SF0183"
/note="Code: MP; COG: COG3015"
/codon_start=1
/transl_table=11
/product="copper homeostasis and adhesion lipoprotein"
/protein_id="NP_706138.1"
/db_xref="GeneID:1027537"
/translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
WRGVLPCADCEGIEISLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
TFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
PDTAGKFYPNKDCSSLGQ"
misc_feature 206213..206911
/gene="cutF"
/locus_tag="SF0183"
/note="envelope stress response activation lipoprotein
NlpE; Region: PRK10523"
/db_xref="CDD:236708"
gene complement(207078..207902)
/gene="yaeF"
/locus_tag="SF0184"
/db_xref="GeneID:1024460"
CDS complement(207078..207902)
/gene="yaeF"
/locus_tag="SF0184"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706139.2"
/db_xref="GeneID:1024460"
/translation="MDKPKAYCRLLLPSFLLLSACTVDISQPDPSATAVDAEAKTWAV
KFQHQSSFTEQSIKEITAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNN
VAEATGAGVQIVSLKKAMKHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIV
EFIPFMVTRQMCSLNPFSEDFRQQCVSDLAKAQLSSVCEGDKKSWFCSEFVTDAFAKS
GHPLTLAQSGWISPADLMHMRIGDVSAFKPETQLQYVGHLKPGIYIKAGRFVGLTQ"
misc_feature complement(207081..207902)
/gene="yaeF"
/locus_tag="SF0184"
/note="YaeF family permuted papain-like enzyme; Region:
PRK11479"
/db_xref="CDD:183157"
gene complement(207955..209673)
/gene="proS"
/locus_tag="SF0185"
/db_xref="GeneID:1024449"
CDS complement(207955..209673)
/gene="proS"
/locus_tag="SF0185"
/note="Code: J; COG: COG0442"
/codon_start=1
/transl_table=11
/product="prolyl-tRNA synthetase"
/protein_id="NP_706140.2"
/db_xref="GeneID:1024449"
/translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA
GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
VKQIKG"
misc_feature complement(207961..209673)
/gene="proS"
/locus_tag="SF0185"
/note="prolyl-tRNA synthetase; Provisional; Region:
PRK09194"
/db_xref="CDD:236405"
gene complement(209784..210491)
/gene="yaeB"
/locus_tag="SF0186"
/db_xref="GeneID:1024442"
CDS complement(209784..210491)
/gene="yaeB"
/locus_tag="SF0186"
/note="Code: S; COG: COG1720"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706141.1"
/db_xref="GeneID:1024442"
/translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIASYNQ
ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
SLVELKEVVCHKGSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNV
RWRVTDAGFEVFALEPR"
misc_feature complement(210003..210485)
/gene="yaeB"
/locus_tag="SF0186"
/note="tRNA (Thr-GGU) A37 N6-methylase [Translation,
ribosomal structure and biogenesis]; Region: TrmO;
COG1720"
/db_xref="CDD:441326"
misc_feature complement(order(210078..210095,210192..210194,
210198..210200,210204..210206,210216..210233,
210306..210308,210318..210320,210339..210341,
210345..210353,210465..210467))
/gene="yaeB"
/locus_tag="SF0186"
/note="homodimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:187753"
misc_feature complement(order(210102..210104,210117..210119,
210186..210188,210192..210194,210216..210218,
210300..210305,210309..210311))
/gene="yaeB"
/locus_tag="SF0186"
/note="cofactor binding site [active]"
/db_xref="CDD:187753"
misc_feature complement(209823..210017)
/gene="yaeB"
/locus_tag="SF0186"
/note="TrmO C-terminal domain; Region: TrmO_C; pfam18389"
/db_xref="CDD:465738"
gene complement(210488..210892)
/gene="rcsF"
/locus_tag="SF0187"
/db_xref="GeneID:1024445"
CDS complement(210488..210892)
/gene="rcsF"
/locus_tag="SF0187"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="NP_706142.1"
/db_xref="GeneID:1024445"
/translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKQMQINASKMKAN
AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
misc_feature complement(210494..210892)
/gene="rcsF"
/locus_tag="SF0187"
/note="Rcs stress response system protein RcsF; Region:
rcsF; PRK10781"
/db_xref="CDD:182725"
gene complement(211010..211825)
/gene="metQ"
/locus_tag="SF0188"
/db_xref="GeneID:1024368"
CDS complement(211010..211825)
/gene="metQ"
/locus_tag="SF0188"
/note="Code: M; COG: COG1464"
/codon_start=1
/transl_table=11
/product="DL-methionine transporter substrate-binding
protein"
/protein_id="NP_706143.1"
/db_xref="GeneID:1024368"
/translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
misc_feature complement(211013..211825)
/gene="metQ"
/locus_tag="SF0188"
/note="D-methionine ABC transporter substrate-binding
protein MetQ; Region: metQ; PRK11063"
/db_xref="CDD:182939"
misc_feature complement(order(211139..211141,211214..211216,
211220..211222,211394..211396,211403..211405,
211490..211492,211553..211555,211562..211570,
211619..211621))
/gene="metQ"
/locus_tag="SF0188"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270316"
gene complement(211865..212518)
/gene="yaeE"
/locus_tag="SF0189"
/db_xref="GeneID:1024394"
CDS complement(211865..212518)
/gene="yaeE"
/locus_tag="SF0189"
/note="Code: R; COG: COG2011"
/codon_start=1
/transl_table=11
/product="DL-methionine transporter permease"
/protein_id="NP_706144.1"
/db_xref="GeneID:1024394"
/translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
FIARMVENALLEIPTGLIEASRAMGATPMQIVCKVLLPEALPGLVNAATITLITLVGY
SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK"
misc_feature complement(211868..212518)
/gene="yaeE"
/locus_tag="SF0189"
/note="D-methionine ABC transporter permease MetI; Region:
PRK10782"
/db_xref="CDD:182726"
misc_feature complement(order(212027..212044,212291..212335))
/gene="yaeE"
/locus_tag="SF0189"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(212096..212098,212108..212113,
212129..212167))
/gene="yaeE"
/locus_tag="SF0189"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(212511..213542)
/gene="metN"
/locus_tag="SF0190"
/db_xref="GeneID:1024446"
CDS complement(212511..213542)
/gene="metN"
/locus_tag="SF0190"
/note="Code: R; COG: COG1135"
/codon_start=1
/transl_table=11
/product="DL-methionine transporter ATP-binding protein"
/protein_id="NP_706145.1"
/db_xref="GeneID:1024446"
/translation="MIKLSNITKVFHQGTRTIQALNNVSRHVPAGQIYGVIGASGAGK
STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQTEPFTDCVPMLRLEFTGQ
SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
VKVEVLGYV"
misc_feature complement(212514..213542)
/gene="metN"
/locus_tag="SF0190"
/note="DL-methionine transporter ATP-binding subunit;
Provisional; Region: metN; PRK11153"
/db_xref="CDD:236863"
gene 213730..214305
/gene="yaeD"
/locus_tag="SF0191"
/db_xref="GeneID:1024365"
CDS 213730..214305
/gene="yaeD"
/locus_tag="SF0191"
/note="Code: E; COG: COG0241"
/codon_start=1
/transl_table=11
/product="D,D-heptose 1,7-bisphosphate phosphatase"
/protein_id="NP_706146.1"
/db_xref="GeneID:1024365"
/translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
MGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKP
ITPEAENAADWVLNSLADLPQAIKKQQKPAQ"
misc_feature 213742..214272
/gene="yaeD"
/locus_tag="SF0191"
/note="D,D-heptose 1,7-bisphosphate phosphatase; Region:
GmhB_yaeD; TIGR00213"
/db_xref="CDD:129317"
gene 214669..216209
/gene="rrsH"
/locus_tag="SF4435"
/db_xref="GeneID:1024454"
rRNA 214669..216209
/gene="rrsH"
/locus_tag="SF4435"
/product="16S ribosomal RNA"
/db_xref="GeneID:1024454"
gene 216278..216354
/locus_tag="SF4436"
/db_xref="GeneID:3161852"
tRNA 216278..216354
/locus_tag="SF4436"
/product="tRNA-Ile"
/codon_recognized="AUC"
/db_xref="GeneID:3161852"
gene 216397..216472
/locus_tag="SF4437"
/db_xref="GeneID:3161851"
tRNA 216397..216472
/locus_tag="SF4437"
/product="tRNA-Ala"
/codon_recognized="GCA"
/db_xref="GeneID:3161851"
gene 216745..216820
/locus_tag="SF4438"
/db_xref="GeneID:3161850"
tRNA 216745..216820
/locus_tag="SF4438"
/product="tRNA-Glu"
/codon_recognized="GAA"
/db_xref="GeneID:3161850"
gene 217014..219917
/gene="rrlH"
/locus_tag="SF4439"
/db_xref="GeneID:1024453"
rRNA 217014..219917
/gene="rrlH"
/locus_tag="SF4439"
/product="23S ribosomal RNA"
/db_xref="GeneID:1024453"
gene 220012..220130
/gene="rrfH"
/locus_tag="SF4440"
/db_xref="GeneID:1024455"
rRNA 220012..220130
/gene="rrfH"
/locus_tag="SF4440"
/product="5S ribosomal RNA"
/db_xref="GeneID:1024455"
gene 220183..220259
/locus_tag="SF4441"
/db_xref="GeneID:3161776"
tRNA 220183..220259
/locus_tag="SF4441"
/product="tRNA-Asp"
/codon_recognized="GAC"
/db_xref="GeneID:3161776"
gene 220422..221225
/gene="dkgB"
/locus_tag="SF0192"
/db_xref="GeneID:1024367"
CDS 220422..221225
/gene="dkgB"
/locus_tag="SF0192"
/note="Code: R; COG: COG0656"
/codon_start=1
/transl_table=11
/product="2,5-diketo-D-gluconate reductase B"
/protein_id="NP_706147.1"
/db_xref="GeneID:1024367"
/translation="MAIPAFGLGTFRLKDDVVISSVKTALELGYRAIDTAQIYDNEAA
VGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPN
DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQ
NRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNAIPAQVILAWAMGEGYSV
IPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD"
misc_feature 220422..221222
/gene="dkgB"
/locus_tag="SF0192"
/note="2,5-didehydrogluconate reductase DkgB; Region:
dkgB; PRK11172"
/db_xref="CDD:183012"
misc_feature order(220446..220454,220521..220523,220533..220538,
220611..220613,220710..220715,220806..220811,
220875..220877,220953..220973,220995..220997,
221031..221033,221076..221093,221100..221102,
221109..221114)
/gene="dkgB"
/locus_tag="SF0192"
/note="putative active site [active]"
/db_xref="CDD:381365"
misc_feature order(220521..220523,220536..220538,220611..220613,
220710..220712)
/gene="dkgB"
/locus_tag="SF0192"
/note="catalytic tetrad [active]"
/db_xref="CDD:381365"
mobile_element complement(221250..222677)
/mobile_element_type="insertion sequence:IS4"
gene complement(221264..222610)
/locus_tag="SF0193"
/db_xref="GeneID:1024389"
CDS complement(221264..222610)
/locus_tag="SF0193"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_706148.1"
/db_xref="GeneID:1024389"
/translation="MFPDSFMHIGQALDLVSRYDSLRNPLTSLGDYLAPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMVLERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature complement(221522..222520)
/locus_tag="SF0193"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene complement(222660..223574)
/gene="yafC"
/locus_tag="SF0194"
/db_xref="GeneID:1024399"
CDS complement(222660..223574)
/gene="yafC"
/locus_tag="SF0194"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_706149.1"
/db_xref="GeneID:1024399"
/translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP
VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF
NSYRKIIASPDYISRYGKPETIDDLKQHVCLGFTEPASLNTWPIACSDGQLHEVKYGL
SSNSGETLKQLCLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDR
AVSTRIRAFIDFLSEHVKTAPGGVMPIS"
misc_feature complement(222696..223574)
/gene="yafC"
/locus_tag="SF0194"
/note="DNA-binding transcriptional regulator YafC; Region:
trans_reg_YafC; NF040888"
/db_xref="CDD:468824"
gene 223815..224615
/gene="yafD"
/locus_tag="SF0195"
/db_xref="GeneID:1024437"
CDS 223815..224615
/gene="yafD"
/locus_tag="SF0195"
/note="Code: S; COG: COG3021"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706150.1"
/db_xref="GeneID:1024437"
/translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI
RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD
DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
misc_feature 223815..224603
/gene="yafD"
/locus_tag="SF0195"
/note="endonuclease/exonuclease/phosphatase family
protein; Region: PRK05421"
/db_xref="CDD:235454"
gene 224843..225463
/gene="yafE"
/locus_tag="SF0196"
/db_xref="GeneID:1024387"
CDS 224843..225463
/gene="yafE"
/locus_tag="SF0196"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="biotin synthase"
/protein_id="NP_706151.2"
/db_xref="GeneID:1024387"
/translation="MGCGAGHASFVAAQNVSAVVAYDLSAQMLDVVAQAAEARQLKNI
TTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRMIVMDVMSPG
HPVRDIWLQTVEALRDTSHVRNYASGEWLRLINEANLIVDNLITDKLPLEFCSWVARM
RTPEALVDAIRIYQQSASTEVRTYFALQNDGSFTSDIIMVEAHKAA"
misc_feature <224846..225175
/gene="yafE"
/locus_tag="SF0196"
/note="Ubiquinone/menaquinone biosynthesis C-methylase
UbiE/MenG [Coenzyme transport and metabolism]; Region:
UbiE; COG2226"
/db_xref="CDD:441828"
gene complement(225511..226857)
/gene="mltD"
/locus_tag="SF0197"
/db_xref="GeneID:1024379"
CDS complement(225511..226857)
/gene="mltD"
/locus_tag="SF0197"
/note="Code: M; COG: COG0741"
/codon_start=1
/transl_table=11
/product="membrane-bound lytic murein transglycosylase D"
/protein_id="NP_706152.2"
/db_xref="GeneID:1024379"
/translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
DARRDVVASTTAALNMMQRLNKMFDDDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVAN
NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAQRLANN
SDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS"
misc_feature complement(225514..226857)
/gene="mltD"
/locus_tag="SF0197"
/note="membrane-bound lytic murein transglycosylase D;
Provisional; Region: mltD; PRK10783"
/db_xref="CDD:182727"
gene complement(226929..227684)
/gene="gloB"
/locus_tag="SF0198"
/db_xref="GeneID:1024396"
CDS complement(226929..227684)
/gene="gloB"
/locus_tag="SF0198"
/note="Code: R; COG: COG0491"
/codon_start=1
/transl_table=11
/product="hydroxyacylglutathione hydrolase"
/protein_id="NP_706153.1"
/db_xref="GeneID:1024396"
/translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAITANNW
QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
SVITTPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTL
VCCAHEYTLSNMKFALSIFPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR
TEDIDLINGINEETLLQQPEERFAWLRSKKDRF"
misc_feature complement(226932..227684)
/gene="gloB"
/locus_tag="SF0198"
/note="hydroxyacylglutathione hydrolase; Provisional;
Region: PRK10241"
/db_xref="CDD:182327"
gene 227715..228440
/gene="yafS"
/locus_tag="SF0199"
/db_xref="GeneID:1024409"
CDS 227715..228440
/gene="yafS"
/locus_tag="SF0199"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706154.1"
/db_xref="GeneID:1024409"
/translation="MMKPARVPQTVVAPDCWGDLPWGELYRKALERQLNPWFTKMYGF
HLLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDICLLAHTLP
WCTDPHRLLREADRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQ
LDWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMK
QSKNKPRIRQAVGATRQCRKPQA"
misc_feature <227946..228092
/gene="yafS"
/locus_tag="SF0199"
/note="Methyltransferase domain; Region: Methyltransf_11;
pfam08241"
/db_xref="CDD:462406"
misc_feature <227967..228254
/gene="yafS"
/locus_tag="SF0199"
/note="Predicted SAM-depedendent methyltransferase
[General function prediction only]; Region: COG4627"
/db_xref="CDD:443666"
gene complement(228437..229015)
/gene="rnhA"
/locus_tag="SF0201"
/db_xref="GeneID:1024338"
CDS complement(228437..229015)
/gene="rnhA"
/locus_tag="SF0201"
/note="Code: L; COG: COG0328"
/codon_start=1
/transl_table=11
/product="RNase HI"
/protein_id="NP_706155.3"
/db_xref="GeneID:1024338"
/translation="MVSVSRTIWRVIAVLIAVIYVRLVVLQFDSITGSLPEMLKQVEI
FTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEV
ILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG
HAGHPENERCDELARAAAMNPTLEDTGYQVEV"
misc_feature complement(228452..228901)
/gene="rnhA"
/locus_tag="SF0201"
/note="ribonuclease H; Reviewed; Region: rnhA; PRK00203"
/db_xref="CDD:178927"
misc_feature complement(order(228491..228493,228545..228547,
228695..228697,228761..228763,228770..228778,
228866..228877))
/gene="rnhA"
/locus_tag="SF0201"
/note="RNA/DNA hybrid binding site [nucleotide binding];
other site"
/db_xref="CDD:260010"
gene 228969..229700
/gene="dnaQ"
/locus_tag="SF0200"
/db_xref="GeneID:1024425"
CDS 228969..229700
/gene="dnaQ"
/locus_tag="SF0200"
/note="Code: L; COG: COG0847"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit epsilon"
/protein_id="NP_706156.2"
/db_xref="GeneID:1024425"
/translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
DEELAAHEARLDLVQKKGGSCLWRA"
misc_feature 228975..229697
/gene="dnaQ"
/locus_tag="SF0200"
/note="DNA polymerase III subunit epsilon; Provisional;
Region: PRK05711"
/db_xref="CDD:235574"
misc_feature order(229002..229013,229017..229022,229149..229154,
229161..229166,229260..229265,229269..229277,
229398..229403,229443..229445,229452..229454,
229467..229469)
/gene="dnaQ"
/locus_tag="SF0200"
/note="active site"
/db_xref="CDD:99835"
misc_feature order(229002..229013,229017..229022,229149..229154,
229161..229166,229260..229265,229269..229274,
229398..229403,229443..229445,229452..229454,
229467..229469)
/gene="dnaQ"
/locus_tag="SF0200"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:99835"
misc_feature order(229002..229004,229008..229010,229275..229277,
229452..229454,229467..229469)
/gene="dnaQ"
/locus_tag="SF0200"
/note="catalytic site [active]"
/db_xref="CDD:99835"
gene 229833..229909
/locus_tag="SF4442"
/db_xref="GeneID:3161847"
tRNA 229833..229909
/locus_tag="SF4442"
/product="tRNA-Asp"
/codon_recognized="GAC"
/db_xref="GeneID:3161847"
gene complement(230040..231086)
/gene="safA"
/locus_tag="SF0202"
/db_xref="GeneID:1027523"
CDS complement(230040..231086)
/gene="safA"
/locus_tag="SF0202"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706157.1"
/db_xref="GeneID:1027523"
/translation="MEIFLSDPISAECPCGPDLEYDPEYLLLFTRAAPREEAQYGDFV
STPENINWAELERDAHRLLMRSKDIRILVVLLRCRIQQAGARGLSEALTLLETLCSTY
PDAIHPQLLATEDITAEDAAVARSNALAALLDHEGVMADIRGITLSNNAAMRLQVRDV
ERSLSALRPADALAPESVRQQLADLEARGTLPLDAFRQAAETTERLQRHARETLNDQA
PDFSRLTQLLALLPGAVQSTTPEILPQPQAEQPENATIVHTEQMQAEQIALPVHIAEE
ISPMTGAEPRQIRDRNDALERLRVIRRWFEHSEPSSPTIPLLRQAERLVGKRVSEVIN
EIPVELLEKWDALE"
misc_feature complement(230046..231065)
/gene="safA"
/locus_tag="SF0202"
/note="Type VI protein secretion system component
TssA1/VasJ/EvfE, contains ImpA_N domain [Intracellular
trafficking, secretion, and vesicular transport]; Region:
TssA1; COG3515"
/db_xref="CDD:442737"
gene complement(231341..231659)
/gene="safB"
/locus_tag="SF0203"
/pseudogene="unknown"
/db_xref="GeneID:1025966"
gene complement(231656..233539)
/gene="safC"
/locus_tag="SF0204"
/db_xref="GeneID:1024401"
CDS complement(231656..233539)
/gene="safC"
/locus_tag="SF0204"
/note="Code: S; COG: COG3519"
/codon_start=1
/transl_table=11
/product="outer membrane usher protein"
/protein_id="NP_706159.1"
/db_xref="GeneID:1024401"
/translation="MDPRLLEYYNRELSYLRETGAEFAARHPKVAARLGMQGTDIADP
YVERMVEAFSFLTARTQLKIDAEFPRFTQRLLEVVSPNYVTPTPSMSVAQLHPDTEEG
DLAKGFTVPRDTAFFSAIPEGESTACQFRSSQDVTLWPLAIEEARLTAAPPDMPALHR
YLPANIHVAGALRITLRTFGELTFSQLAGLDRLPFYLCGEERTASHLLELLHTSAIAP
LAGIPGHFDGALDVNLQQPVMYEGLEPDQGLLPLAWNVFHGHNLLHEYFACPERFYFF
TPTGLSAGLQKIDGGVAEIVILLNRLPPDWLIHQTNAAQFSLFCTPVINLFPRVTARI
DVTHSTTEQHLVVDRTHPLDYEVFSVQEVEGLETDTTRKMAFRPLYHTRNNDEGNHGR
YFSLRREPRRLSENARRYGTRTPYTGSEVFLSLVDQYEAPYPENLRHITITAMVTNRD
LPCLIARNGRDDLTVDAAIPVAGVGLIRPPRSPQPPMAEREMAWRLIRQLSFNYLPLA
DLDHRTGGQALRDLLNLFIPAHDSPQSRQVRSLIGCKTTPVTRRLPGSGLLVYGRGVS
CELTVDEEGFSGISPYLFGLVLEHYIARHVSINTFSQMTLHSMQRGKIMTWPVRAGQR
GSV"
misc_feature complement(231668..233539)
/gene="safC"
/locus_tag="SF0204"
/note="Type VI secretion system, TssF; Region: T6SS_TssF;
pfam05947"
/db_xref="CDD:428685"
gene complement(233555..234049)
/locus_tag="SF0205"
/db_xref="GeneID:1024373"
CDS complement(233555..234049)
/locus_tag="SF0205"
/note="Code: S; COG: COG3518"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706160.2"
/db_xref="GeneID:1024373"
/translation="MSASRQRPGNHLLPTLFDRLCDDAPNQKRDHGISVSPVQIKEII
RRDLSFLLNTVSHEDDIDAARYPYAAASVLNYGLPPLAGSFLYEHKWDDIRRAILRTI
TRFEPRLKASTLQIIPLQDERRQSGHNTLQFEIRGEILTQPYPTAFRVRSALDMEQSR
ITFF"
misc_feature complement(233579..234040)
/locus_tag="SF0205"
/note="Predicted component of the type VI protein
secretion system [Intracellular trafficking, secretion,
and vesicular transport]; Region: COG3518"
/db_xref="CDD:442740"
gene complement(234046..234244)
/locus_tag="SF0206"
/pseudogene="unknown"
/db_xref="GeneID:1024342"
gene complement(234863..235777)
/locus_tag="SF0208"
/pseudogene="unknown"
/db_xref="GeneID:1024333"
mobile_element 235784..237114
/mobile_element_type="insertion sequence:IS2"
gene 235830..236240
/locus_tag="SF0209"
/db_xref="GeneID:1024408"
CDS 235830..236240
/locus_tag="SF0209"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706164.1"
/db_xref="GeneID:1024408"
/translation="MIVLILVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 235875..236237
/locus_tag="SF0209"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 236198..237103
/locus_tag="SF0210"
/db_xref="GeneID:1024393"
CDS 236198..237103
/locus_tag="SF0210"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_706165.1"
/db_xref="GeneID:1024393"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature 236198..237100
/locus_tag="SF0210"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(237160..237447)
/locus_tag="SF0211"
/db_xref="GeneID:1024430"
CDS complement(237160..237447)
/locus_tag="SF0211"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706166.1"
/db_xref="GeneID:1024430"
/translation="MDEEYRKDLQLWFGLTHASFCVMPRVFMEAMPPEWQEKMAQLLF
EYSDTIKTDVCGVHSCFVTAKDGNNRFMRMPEDILNYRHPRREFIESFLKK"
mobile_element complement(237453..238702)
/mobile_element_type="insertion sequence:IS911"
gene complement(237461..238666)
/locus_tag="SF0214"
/pseudogene="unknown"
/db_xref="GeneID:1024397"
gene 238841..239743
/locus_tag="SF0215"
/db_xref="GeneID:1024341"
CDS 238841..239743
/locus_tag="SF0215"
/codon_start=1
/transl_table=11
/product="terminase large subunit"
/protein_id="NP_706170.1"
/db_xref="GeneID:1024341"
/translation="MWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFL
KNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEE
TIKCQPFECPDHFYVIGGMDFGWDHPQAQVQLWWDKEADTIYVSRVWKAKEKTAVQAW
GAVKSWAHKVPTAWPHDGNQHEKGGGEQLKGQYADAGFMMLQEHATWPDGGNAVEPGI
TELRDMMLDGRFKVFNTCEPFFEEFRLYHRDENGKIVKLNDDVLSAVRYAYMMRRFAK
MMRDIKKPKEKKIPAPIRPIARRT"
misc_feature <238844..239725
/locus_tag="SF0215"
/note="Phage terminase large (ATPase) subunit and
inactivated derivatives [Mobilome: prophages,
transposons]; Region: COG5565"
/db_xref="CDD:444307"
gene 239744..241909
/locus_tag="SF0216"
/db_xref="GeneID:1024354"
CDS 239744..241909
/locus_tag="SF0216"
/codon_start=1
/transl_table=11
/product="packaging glycoprotein"
/protein_id="NP_706171.2"
/db_xref="GeneID:1024354"
/translation="MADENRLNSILCKFDADWMASDEARTEATNDLYFSRVSQWDDWL
SNYTTLQYRGQFDVVRPEVRKLVAEMRRNPVDVLFRPKDGANPDAADVLMGMYRTDMR
HNTAKIAVNVGVREQIESGVGAWRLVTQYEDNDPTSNNQVIRRLPIHEACSHVIWDAN
SKQMDKSDAKHCTVINALSRNGWKEFAEDYGIDPDTLPSFQNPNDTWLFPWVSNDVVY
VAEYYEVEEEKEKVFIYRDPLTGEPVSYYQQDIKDVIDDLANRGFIKVAERKVKRRRV
YKSIITCTQILKDREKIAGEHIPIVPVYGEWSFAGDKECYEGVVRLTKDGQRLRNMIM
SFNADIVARSPKKKPTFFPEQIEGYEYMYGGNDDYPYYLQNRTDENGNDLPIGPISYM
ENPEVPQANAYMLEAATNAVKEVASLGVDAQAANGQVAFDTVNQLNMRADLETYVFQD
NLATAMRRDGEIYASMVNDIYDVPRHVTLTLEDGSEKDVQLYAQVVDYQSGNVVTLND
IRGRYECYTDVGPSFQSMKEQNRAEIQELLTKVPQGTPEFQMLMLQYFTLLDGKGVEM
MREYANKQLVMMGLKKPETPEEMEMVQQAQQQPQQPSAEQIQAQGILLQGQAELLKAE
NQQAQIQVEAAKVEAQNQLNAAKIAEIFNNMDLDKQAELREYLRLVGQFQQQRSKDAR
ANAELLLKDADQTHSQRMDFANLMRQVQIPSGGVAETPQ"
misc_feature 239780..241780
/locus_tag="SF0216"
/note="Phage P22-like portal protein; Region: P22_portal;
pfam16510"
/db_xref="CDD:293119"
gene 241923..242834
/locus_tag="SF0217"
/db_xref="GeneID:1024346"
CDS 241923..242834
/locus_tag="SF0217"
/codon_start=1
/transl_table=11
/product="scaffolding protein"
/protein_id="NP_706172.1"
/db_xref="GeneID:1024346"
/translation="MDQTTDIQASEELTLPGNHAAASADGLVVDNANDSAGQEEGFEI
VRKDDEKPKQDPATNAEFARRRIERKRQRELEQQMEAVKRGELPEHLRVNPELPKQPD
PNDYLSEDALAKYDYDQSRALAAFQQANSEWQIKAMDARSQAVAEQGRKTQEFTQQSA
QYVEAARKHYEAAEKLNIPDYQEKEDAFMQLVPPAVGADIMRLFPEKSAALMYHLGAN
PEKTRQLLAMDGQSALIELTRLSERLTLKPRAKPVSEAPLPDEPIQGHAVAANISAIE
KQMEAAANKGDVETYRKLKAQLNKGIR"
misc_feature 241923..242828
/locus_tag="SF0217"
/note="Bacteriophage, scaffolding protein; Region:
Phage-scaffold; pfam09306"
/db_xref="CDD:286399"
gene 242834..244129
/locus_tag="SF0218"
/db_xref="GeneID:1024344"
CDS 242834..244129
/locus_tag="SF0218"
/codon_start=1
/transl_table=11
/product="coat protein"
/protein_id="NP_706173.1"
/db_xref="GeneID:1024344"
/translation="MALNEGQLVTYALDEIIGTVQNLTPMASKVTKYPPPAESMQRSS
NTVWMPVEQEAPTQTGWDLTGNATGILELSVKCNMGDPDNDFFELRADDLRDERSYRR
RIQASAKKLANNIESAIAKQATEMGSLVVHDTRAIGPSTGLPGWDFVSDAERLMFSRE
LNRDMGISYFLNPDDYRKAGRNLVDGDIFGRVPEEAYRNGTIQRQIAGFDEILRSPKL
PAVTKSTATGVTVSGAQKFKPQAYTLDTDGNKENVDNRVATVTVSSTTGFKRGDKISF
IGVKFLSQMAKNVLTDDATFSITRVIDGTHIEITPKPIALDDASLTKEEKAYANVNTS
LADTTPVNVLNVATTTANVFWADDSIRLLSQPIPVTHELFAGMKTSSFSIPGIGVNGI
FATQGDINTLSGKCRIAVWYSACAVRPEAIGVGLPNQTA"
misc_feature 242834..244126
/locus_tag="SF0218"
/note="P22 coat protein - gene protein 5; Region:
P22_CoatProtein; cl22542"
/db_xref="CDD:473967"
gene 244174..244404
/locus_tag="SF0219"
/db_xref="GeneID:1024336"
CDS 244174..244404
/locus_tag="SF0219"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706174.2"
/db_xref="GeneID:1024336"
/translation="MTHMIFRHGDMKKWKGVGYDFEIVKAEELQEYLDAGWFSHPDDL
LKDVAEPEPEEKQRKKPGRKPKAAADEPDNEG"
gene 244382..244882
/locus_tag="SF0220"
/db_xref="GeneID:1024376"
CDS 244382..244882
/locus_tag="SF0220"
/codon_start=1
/transl_table=11
/product="DNA stabilization protein"
/protein_id="NP_706175.1"
/db_xref="GeneID:1024376"
/translation="MNLTTKGDLVLAALRKLGVASNATLTDVEPQSMEDGVNDLEMMM
AEWLGGDASPGINVGYIFADADVAPDPGDEHGLSNNAINAVIFNLACRIAPDYALEAS
AKLITTARYGKERLVKLSAMDRAKAAKCKSGYPNRMPVGSGNQLAKWNGWNYFHRKEP
CDNGSE"
misc_feature 244394..244849
/locus_tag="SF0220"
/note="P22 tail accessory factor; Region: P22_Tail-4;
pfam11650"
/db_xref="CDD:402995"
gene 244882..246300
/locus_tag="SF0221"
/db_xref="GeneID:1025967"
CDS 244882..246300
/locus_tag="SF0221"
/codon_start=1
/transl_table=11
/product="packaged DNA stabilization protein"
/protein_id="NP_706176.1"
/db_xref="GeneID:1025967"
/translation="MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLR
SFPGIAKRSDVNGVSRGVEYNMAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRT
SQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDS
WFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVG
AALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYIIDSGQVSPIASASI
EKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSIANGPQWCVLKTGLY
DDVYRAIDFVYEGNQITCGDKLESVTGKLQFDISSQYDKQQEHLLFTPLFKADNARVF
DLEVESSTGVAQYADRLFLSATTDCINYGREQMIEQNEPFVYDKRVLWKRVGRIRKNV
GFKLRVITKSPVTLSGAQIRIE"
misc_feature 244891..246297
/locus_tag="SF0221"
/note="Phage stabilization protein; Region:
Phage_stabilize; pfam11134"
/db_xref="CDD:288037"
gene 246300..247148
/locus_tag="SF0222"
/db_xref="GeneID:1024427"
CDS 246300..247148
/locus_tag="SF0222"
/codon_start=1
/transl_table=11
/product="packaged DNA stabilization protein"
/protein_id="NP_706177.1"
/db_xref="GeneID:1024427"
/translation="MADSNLNVPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGN
VANKANEAGQGAYDAQVRNDEQDVILADHEQRISAAEATLVNHEERIRQAESTLQDHE
TRIAQNESDISSLDTRVQSLESQVSDHETRIDALEYATTRKKSEVVYSGVSVTIPTAP
TNLVSLLKTLTPSSGSLAPFFDTVNNKMVVFNENKTLLFKLSIVGTWPSGTANRSMQL
TFSGSVPDTLVSSRNAATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATTI
KIIAEQ"
misc_feature 246507..>246740
/locus_tag="SF0222"
/note="Predicted nucleic acid-binding protein DR0291,
contains C4-type Zn-ribbon domain [General function
prediction only]; Region: DR0291; COG1579"
/db_xref="CDD:441187"
misc_feature 246690..247145
/locus_tag="SF0222"
/note="Sf6-type phage tail needle knob or tip of some
Caudovirales; Region: Phage_tail_NK; pfam16532"
/db_xref="CDD:406836"
gene 247148..247603
/locus_tag="SF0223"
/db_xref="GeneID:1024359"
CDS 247148..247603
/locus_tag="SF0223"
/codon_start=1
/transl_table=11
/product="head assembly protein"
/protein_id="NP_706178.2"
/db_xref="GeneID:1024359"
/translation="MITFKPTRNIDLIEAVGNHPDIIAGSNNGDGYDYKPECRYFEVN
VHGQFGGIVYYQEIQPLTLDCHAMYLPEIRGFSKEIGLAFWRYILTNTTVQCVTSFAA
RKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYSATREELIDFLNHGR"
misc_feature 247148..247600
/locus_tag="SF0223"
/note="head assembly protein; Region: PHA00771"
/db_xref="CDD:164842"
gene 247606..248298
/locus_tag="SF0224"
/db_xref="GeneID:1024388"
CDS 247606..248298
/locus_tag="SF0224"
/codon_start=1
/transl_table=11
/product="DNA transfer protein"
/protein_id="NP_706179.1"
/db_xref="GeneID:1024388"
/translation="MLYAFKLGRKLRGEEPYCPEKGGKGGSSDKSAKYAAEAQKYAAD
LQNQQWQTIMKNLAPFTPLAEQYVNQLQNLSSLEGQGQALNQYYNSKQYKDLAGQARY
QSLAAAEATGGLGSTATSNQLATIAPTLGQSWLSNQMSNYNNLANVGLGALQGQANAG
QTYANNMSSIAQQSAALAAANANKPSSLQTAISGGTSGAIAGAGLASLLGTSTPWGAG
IGAGIGLLGSLF"
gene 248308..249639
/locus_tag="SF0225"
/db_xref="GeneID:1024340"
CDS 248308..249639
/locus_tag="SF0225"
/codon_start=1
/transl_table=11
/product="prophage DNA injection protein"
/protein_id="NP_706180.1"
/db_xref="GeneID:1024340"
/translation="MATWQGTNGGLLAGIGGVNSNAPSVNDIGNTLQLIRQNNDIERS
GANNVGLTALQGLSGIAGVFQQEKQAQRQKEFQQAYANAYASGDRGALRQLATQYPDQ
IESVRKGMGFIDEEQRNSIGTLAAGARLASSSPEAMQSWLQNNAGELARVGVNPHDVA
QMYQQNPRQFGEFVDHLGMNSLGPEKYFDLQDKMQGRQVTMRGQDLDSQTAARNQAIT
MRGQDIQANLGQQRINLDAETNRINNENKRLDRMLSAETNDLKRQEIQSRIAANNQQL
QQKQQALNDGYKDGINTLTTSMFTLNDIVSSPSLKSITGLRGVIPNVPGSQAADTQAR
LDTFKSQAYLTAVQAMRGMGALSDAEGKKLDQAVGSLQNSQSEESFRRNAGVILNTLN
QKRNEAVGKYVQQNGIKRVEAPQASIDYLKQHPELSIDFINRYGYLPSLGQ"
misc_feature 248335..248982
/locus_tag="SF0225"
/note="DNA/protein translocase of phage P22 injectosome;
Region: Inj_translocase; pfam16928"
/db_xref="CDD:435660"
gene 249640..251370
/locus_tag="SF0226"
/db_xref="GeneID:1024360"
CDS 249640..251370
/locus_tag="SF0226"
/codon_start=1
/transl_table=11
/product="DNA transfer protein"
/protein_id="NP_706181.2"
/db_xref="GeneID:1024360"
/translation="MANYRDLLEQAGARYGVPEGLMTALGAKESSYNPAAVSSAGAVG
LTQVMPGTWRDMGYTDEQMQNPEYQADAGARYLAKMYQQFGNWRDSLQAYHDGPGNVM
KAKRGEYTPGPEGRGYVDDRFAQWAGDPVTDSTVEQRATSAKVHPQQDPNNPFAQLEV
QSSEQVSASGVQSDPNNPFAQIEQQAASQQPPQPVSSVAPKPVQQQTVNQANNAPTRE
EPSLMQQAGDWLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLD
DVYRPVDRPTDPYAQAGESIGGYLVPGAGVAGNMVIGSLADAANQRGDFAENAAINAG
LSIATHGLINGVTRGVRGASNIISGNKTSAQRATTAPTETSPFSGDAAAATNPAVHAA
EARVAQGVPMTPATKNPEEVVRTVAAQKRPNLASSLDELDINPQAEVLESAERLNVDS
LLPSHFSGNEQYKAVEQAIKSRAGSALQVQENEAIRQLAQGAGEIIDRVSGAKDALGM
SDKFIDTVNGRMSALMKRSDQLYRNVEKAMPAGAKIDAPSTRSMLKQVAEDLGGMKNL
DPIEKRVEVA"
misc_feature 249694..249996
/locus_tag="SF0226"
/note="lytic transglycosylase(LT)-like domain; Region:
LT-like; cd00254"
/db_xref="CDD:381594"
misc_feature order(249724..249726,249778..249786,249793..249795,
249865..249867,249919..249924)
/locus_tag="SF0226"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:381594"
mobile_element 251442..252747
/mobile_element_type="insertion sequence:IS629"
gene 251496..251822
/locus_tag="SF0227"
/db_xref="GeneID:1024332"
CDS 251496..251822
/locus_tag="SF0227"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706182.1"
/db_xref="GeneID:1024332"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature 251499..251786
/locus_tag="SF0227"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 251822..252705
/locus_tag="SF0228"
/pseudogene="unknown"
/db_xref="GeneID:1024362"
gene complement(252756..253094)
/gene="psiF"
/locus_tag="SF0229"
/db_xref="GeneID:1024320"
CDS complement(252756..253094)
/gene="psiF"
/locus_tag="SF0229"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706184.1"
/db_xref="GeneID:1024320"
/translation="MKRDGAMKITFLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQ
QATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQALKGDDRNK
FMSACLKKAA"
misc_feature complement(252759..253076)
/gene="psiF"
/locus_tag="SF0229"
/note="phosphate starvation-inducible protein PsiF;
Region: PRK11505"
/db_xref="CDD:183165"
gene complement(253195..254679)
/gene="phoA"
/locus_tag="SF0230"
/db_xref="GeneID:1024334"
CDS complement(253195..254679)
/gene="phoA"
/locus_tag="SF0230"
/note="Code: P; COG: COG1785"
/codon_start=1
/transl_table=11
/product="alkaline phosphatase"
/protein_id="NP_706185.1"
/db_xref="GeneID:1024334"
/translation="MSRPRLIVALFLFFNVFVHGENKVKQSTIALALLPLLFTPVTKA
RTPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSE
ITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTDVKT
YNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSA
TSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQA
RGYQLVNDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTYTPN
PQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDE
AVQRALEFAKKEGNTLVIVTADHAHASQVVAPDTKAPGLTQALNTKDGAVMVMSYGNS
EEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK"
misc_feature complement(253198..254613)
/gene="phoA"
/locus_tag="SF0230"
/note="alkaline phosphatase; Provisional; Region:
PRK10518"
/db_xref="CDD:236706"
gene complement(254711..254971)
/gene="yaiB"
/locus_tag="SF0231"
/db_xref="GeneID:1025969"
CDS complement(254711..254971)
/gene="yaiB"
/locus_tag="SF0231"
/codon_start=1
/transl_table=11
/product="anti-RssB factor"
/protein_id="NP_706186.1"
/db_xref="GeneID:1025969"
/translation="MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
QQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPCQ"
misc_feature complement(254714..254971)
/gene="yaiB"
/locus_tag="SF0231"
/note="anti-adapter protein IraP; Region: PRK10244"
/db_xref="CDD:236666"
gene complement(255153..255356)
/locus_tag="SF0230a"
/db_xref="GeneID:16608303"
CDS complement(255153..255356)
/locus_tag="SF0230a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439229.1"
/db_xref="GeneID:16608303"
/translation="MLQSSADKACNVLVKKVRYLKDVRKITKMMNGKLIYSWLKWQCG
EFFSLNYKLTKRIYFIAFIYNKG"
gene 255434..256528
/gene="ddl"
/locus_tag="SF0232"
/db_xref="GeneID:1024369"
CDS 255434..256528
/gene="ddl"
/locus_tag="SF0232"
/note="Code: M; COG: COG1181"
/codon_start=1
/transl_table=11
/product="D-alanyl-alanine synthetase A"
/protein_id="NP_706187.1"
/db_xref="GeneID:1024369"
/translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVI
FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
LTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
SGLGYTDLITRLIELALERHAADNALKTTM"
misc_feature 255434..256489
/gene="ddl"
/locus_tag="SF0232"
/note="D-alanine--D-alanine ligase; Region: ddl; PRK01966"
/db_xref="CDD:234993"
gene complement(256552..256791)
/locus_tag="SF0233"
/db_xref="GeneID:1024363"
CDS complement(256552..256791)
/locus_tag="SF0233"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706188.2"
/db_xref="GeneID:1024363"
/translation="MLFFVNGAAMNLPVKIRRDWHYYAFAIGLIFILNGVVGVLGFEA
KGWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ"
misc_feature complement(256555..256764)
/locus_tag="SF0233"
/note="Protein of unknown function (DUF2754); Region:
DUF2754; pfam10953"
/db_xref="CDD:402504"
gene 257024..257332
/locus_tag="SF0234"
/db_xref="GeneID:1027522"
CDS 257024..257332
/locus_tag="SF0234"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706189.1"
/db_xref="GeneID:1027522"
/translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLAGCLIFAVVALWLHWRHRRQ
"
misc_feature 257024..257326
/locus_tag="SF0234"
/note="Protein of unknown function (DUF2755); Region:
DUF2755; pfam10954"
/db_xref="CDD:402505"
gene complement(257391..258485)
/gene="yaiW"
/locus_tag="SF0235"
/db_xref="GeneID:1024292"
CDS complement(257391..258485)
/gene="yaiW"
/locus_tag="SF0235"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706190.1"
/db_xref="GeneID:1024292"
/translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
KMPASVKDRDAWAKDLATTFESQGLAPTLENVYSVLAVAQQESNYQADPAVPGLSKIA
WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
LATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
QLESPKITRNLTTAWFAKRVDERRARCMKQ"
misc_feature complement(257397..258341)
/gene="yaiW"
/locus_tag="SF0235"
/note="Protein of unknown function (DUF1615); Region:
DUF1615; pfam07759"
/db_xref="CDD:429641"
gene complement(258498..259718)
/gene="sbmA"
/locus_tag="SF0236"
/db_xref="GeneID:1024311"
CDS complement(258498..259718)
/gene="sbmA"
/locus_tag="SF0236"
/note="Code: I; COG: COG1133"
/codon_start=1
/transl_table=11
/product="microcin B17 transporter"
/protein_id="NP_706191.2"
/db_xref="GeneID:1024311"
/translation="MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ
IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIA
FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
LDGDKIQEVTHTLS"
misc_feature complement(258501..259718)
/gene="sbmA"
/locus_tag="SF0236"
/note="peptide antibiotic transporter SbmA; Region:
PRK11098"
/db_xref="CDD:182960"
gene 260070..261227
/gene="yaiH"
/locus_tag="SF0237"
/db_xref="GeneID:1024317"
CDS 260070..261227
/gene="yaiH"
/locus_tag="SF0237"
/note="Code: M; COG: COG1680"
/codon_start=1
/transl_table=11
/product="beta-lactam binding protein AmpH"
/protein_id="NP_706192.1"
/db_xref="GeneID:1024317"
/translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD
QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITHPLGMK
DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPRIIQKTGGGGGF
ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
misc_feature 260070..261203
/gene="yaiH"
/locus_tag="SF0237"
/note="beta-lactam binding protein AmpH; Provisional;
Region: PRK10662"
/db_xref="CDD:236732"
gene complement(261228..261776)
/gene="yaiV"
/locus_tag="SF0238"
/db_xref="GeneID:1025745"
CDS complement(261228..261776)
/gene="yaiV"
/locus_tag="SF0238"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706193.1"
/db_xref="GeneID:1025745"
/translation="MPVKDLTGITAKDAQMLSVVKPLQEFGKLDKCLSRYGTRFEFNN
EKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLI
SEGNCTGYHLPAKQTRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALR
KGGYIEMNKGKLVAINRLPSEY"
misc_feature complement(261231..261731)
/gene="yaiV"
/locus_tag="SF0238"
/note="hydrogen peroxide resistance inhibitor IprA;
Region: PRK11832"
/db_xref="CDD:183332"
gene complement(261819..262347)
/gene="yaiU"
/locus_tag="SF0239"
/pseudo
/db_xref="GeneID:1024351"
misc_feature complement(261819..262347)
/gene="yaiU"
/locus_tag="SF0239"
/note="Similar to Escherichia coli K12 flagellin
structural protein gi: 1786572 (468 aa). BLAST with
identity of 98% in 176 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(262366..263178)
/locus_tag="SF0240"
/db_xref="GeneID:1024371"
CDS complement(262366..263178)
/locus_tag="SF0240"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706194.1"
/db_xref="GeneID:1024371"
/translation="MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGY
RKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNP
DAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRER
IKKKIYGTREEARSDIFDYIEMFYNSKRRHGSSEQMSPTEYENQYYQRLGSV"
misc_feature complement(262399..>263175)
/locus_tag="SF0240"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
mobile_element complement(263409..264672)
/mobile_element_type="insertion sequence:IS600"
gene complement(263452..264270)
/locus_tag="SF0241"
/db_xref="GeneID:1024355"
CDS complement(263452..264270)
/locus_tag="SF0241"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706195.1"
/db_xref="GeneID:1024355"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLACLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(263479..>264270)
/locus_tag="SF0241"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(264306..264608)
/locus_tag="SF0242"
/db_xref="GeneID:1027525"
CDS complement(264306..264608)
/locus_tag="SF0242"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706196.1"
/db_xref="GeneID:1027525"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(264336..264608)
/locus_tag="SF0242"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(264841..265410)
/locus_tag="SF0243"
/db_xref="GeneID:1024290"
CDS complement(264841..265410)
/locus_tag="SF0243"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706197.1"
/db_xref="GeneID:1024290"
/translation="MITDVWKYRGKSTDCADRADDYYHDRLALTVDNSTIDDNYEHYT
YNGTYNNAADTHVVDVYNIGTAITLDQEVDLSITNNSHVAGITLTQGYEWEDIDDNTV
STGVNSSEVFNNTITVKDSTVTSGSWTDEGTTGWFGNTGNASDYSGKSNFVTVDTDGD
GVADSTIASWDDVALAVVAHPNVDNAMQT"
mobile_element complement(265374..266681)
/note="partial"
/mobile_element_type="insertion sequence:IS2"
gene complement(265385..266290)
/locus_tag="SF0244"
/db_xref="GeneID:1024390"
CDS complement(265385..266290)
/locus_tag="SF0244"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_706198.1"
/db_xref="GeneID:1024390"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(265388..266290)
/locus_tag="SF0244"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(266248..266658)
/locus_tag="SF0245"
/db_xref="GeneID:1024319"
CDS complement(266248..266658)
/locus_tag="SF0245"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706199.3"
/db_xref="GeneID:1024319"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(266251..266613)
/locus_tag="SF0245"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
mobile_element 266682..267449
/mobile_element_type="insertion sequence:IS1"
gene 266737..267012
/gene="insA"
/locus_tag="SF0246"
/db_xref="GeneID:1024325"
CDS 266737..267012
/gene="insA"
/locus_tag="SF0246"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706200.1"
/db_xref="GeneID:1024325"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 266758..>267009
/gene="insA"
/locus_tag="SF0246"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 267039..267434
/gene="insB"
/locus_tag="SF0247"
/db_xref="GeneID:1023584"
CDS 267039..267434
/gene="insB"
/locus_tag="SF0247"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706201.1"
/db_xref="GeneID:1023584"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 267042..267431
/gene="insB"
/locus_tag="SF0247"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(267479..267850)
/locus_tag="SF0248"
/db_xref="GeneID:1024306"
CDS complement(267479..267850)
/locus_tag="SF0248"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706202.1"
/db_xref="GeneID:1024306"
/translation="MHSWKKKLVVSQLALACTLAITSQANAATNDISGQTYNTFHHYN
DATYADDVYYDGYVGWNNYAADSYYNGDIYPVINNATVNGVISTYYLDDGISTNTNAN
SLTIKNSTIHGMIYSECMTTD"
gene 268341..269348
/gene="hemB"
/locus_tag="SF0249"
/db_xref="GeneID:1024339"
CDS 268341..269348
/gene="hemB"
/locus_tag="SF0249"
/note="Code: H; COG: COG0113"
/codon_start=1
/transl_table=11
/product="delta-aminolevulinic acid dehydratase"
/protein_id="NP_706203.1"
/db_xref="GeneID:1024339"
/translation="MHLNSTNIRQTMTDLIQRPRRLRKSPALRAMFEETTLSLNDLVL
PIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSD
AWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGK
QAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREA
AGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTEL
PIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKIL
R"
misc_feature 268374..269330
/gene="hemB"
/locus_tag="SF0249"
/note="porphobilinogen synthase; Region: PRK09283"
/db_xref="CDD:236450"
misc_feature order(268398..268400,268407..268412,268443..268445,
268515..268517,268524..268526,268791..268796,
268875..268880,268965..268973,269028..269030,
269037..269039,269055..269057,269064..269069,
269121..269135,269205..269207,269259..269261,
269271..269273,269280..269282)
/gene="hemB"
/locus_tag="SF0249"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238226"
misc_feature order(268725..268727,268731..268733,268737..268739,
268761..268763,268866..268868,268956..268958,
268974..268976,268983..268988,269001..269003,
269019..269021,269031..269033,269112..269114,
269181..269183,269190..269192,269307..269309)
/gene="hemB"
/locus_tag="SF0249"
/note="active site"
/db_xref="CDD:238226"
misc_feature order(268956..268958,269112..269114)
/gene="hemB"
/locus_tag="SF0249"
/note="Schiff base residues [active]"
/db_xref="CDD:238226"
gene complement(269454..270305)
/gene="tauD"
/locus_tag="SF0250"
/db_xref="GeneID:1024318"
CDS complement(269454..270305)
/gene="tauD"
/locus_tag="SF0250"
/note="Code: Q; COG: COG2175"
/codon_start=1
/transl_table=11
/product="taurine dioxygenase"
/protein_id="NP_706204.1"
/db_xref="GeneID:1024318"
/translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSWLRAEHDFRKSFP
EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES
EALLGFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGD
KPFYRAG"
misc_feature complement(269469..270299)
/gene="tauD"
/locus_tag="SF0250"
/note="taurine dioxygenase; Reviewed; Region: tauD;
PRK09553"
/db_xref="CDD:181947"
misc_feature complement(order(269541..269543,269928..269930,
270003..270005,270009..270011))
/gene="tauD"
/locus_tag="SF0250"
/note="active site"
/db_xref="CDD:238154"
misc_feature complement(order(269541..269543,270003..270005,
270009..270011))
/gene="tauD"
/locus_tag="SF0250"
/note="iron coordination sites [ion binding]; other site"
/db_xref="CDD:238154"
gene complement(270302..271129)
/gene="tauC"
/locus_tag="SF0251"
/db_xref="GeneID:1024347"
CDS complement(270302..271129)
/gene="tauC"
/locus_tag="SF0251"
/note="Code: P; COG: COG0600"
/codon_start=1
/transl_table=11
/product="taurine ABC transporter permease"
/protein_id="NP_706205.1"
/db_xref="GeneID:1024347"
/translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
QLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
IAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ"
misc_feature complement(270305..271129)
/gene="tauC"
/locus_tag="SF0251"
/note="taurine ABC transporter permease TauC; Region:
PRK10160"
/db_xref="CDD:182276"
misc_feature complement(order(270479..270496,270725..270769))
/gene="tauC"
/locus_tag="SF0251"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(270548..270550,270560..270565,
270581..270619))
/gene="tauC"
/locus_tag="SF0251"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(271126..271893)
/gene="tauB"
/locus_tag="SF0252"
/db_xref="GeneID:1024295"
CDS complement(271126..271893)
/gene="tauB"
/locus_tag="SF0252"
/note="Code: P; COG: COG1116"
/codon_start=1
/transl_table=11
/product="taurine ABC transporter ATP-binding subunit"
/protein_id="NP_706206.1"
/db_xref="GeneID:1024295"
/translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK
MQRLEIAHQMLKKVGLEGAEKRYIWQLSDGQRQRVGIARALAANPQLLLLDEPFGALD
AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLRLNFA
RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS"
misc_feature complement(271129..271893)
/gene="tauB"
/locus_tag="SF0252"
/note="taurine ABC transporter ATP-binding subunit;
Region: tauB; PRK11248"
/db_xref="CDD:183056"
gene complement(271906..272802)
/gene="tauA"
/locus_tag="SF0253"
/db_xref="GeneID:1024308"
CDS complement(271906..272802)
/gene="tauA"
/locus_tag="SF0253"
/note="Code: P; COG: COG0715"
/codon_start=1
/transl_table=11
/product="taurine ABC transporter substrate-binding
subunit"
/protein_id="NP_706207.1"
/db_xref="GeneID:1024308"
/translation="MNVTVAYQTSAEPAKVAQADNTFAKESGASVDWRKFDSGASIVR
ALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKR
IAVPFISTTHYSLLAALKHWGIKPGLVEIVNLQPPAIIAAWQRGDIDGAYVWAPAVNA
LEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD
AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKAIIDTAQFLK
EQGKVPAVANDYSQYVTSRFVQ"
misc_feature complement(271909..272802)
/gene="tauA"
/locus_tag="SF0253"
/note="taurine transporter substrate binding subunit;
Provisional; Region: tauA; PRK11480"
/db_xref="CDD:183158"
misc_feature complement(order(272254..272256,272332..272334,
272341..272346,272470..272472,272485..272487,
272551..272553,272686..272688,272776..272778))
/gene="tauA"
/locus_tag="SF0253"
/note="putative chemical substrate binding site [chemical
binding]; other site"
/db_xref="CDD:270278"
mobile_element complement(273345..274112)
/mobile_element_type="insertion sequence:IS1"
gene complement(273360..273755)
/gene="insB"
/locus_tag="SF0254"
/db_xref="GeneID:1024305"
CDS complement(273360..273755)
/gene="insB"
/locus_tag="SF0254"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706208.1"
/db_xref="GeneID:1024305"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLKLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(273363..273752)
/gene="insB"
/locus_tag="SF0254"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(273782..274057)
/gene="insA"
/locus_tag="SF0255"
/db_xref="GeneID:1027436"
CDS complement(273782..274057)
/gene="insA"
/locus_tag="SF0255"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706209.1"
/db_xref="GeneID:1027436"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHLRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<273785..274036)
/gene="insA"
/locus_tag="SF0255"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 274202..274870
/gene="ykgH"
/locus_tag="SF0256"
/db_xref="GeneID:1024329"
CDS 274202..274870
/gene="ykgH"
/locus_tag="SF0256"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706210.1"
/db_xref="GeneID:1024329"
/translation="MSEQIKQDIDLIEILFHLKKKIRVILFIMAICMAMVLLFLYINK
DNTKVIYSLKINQTTPGILVSCDSNNNFACQTTMTEDVIQRITTFFQTSPDIKNREIR
LEWSGDKRDLPTAEEEISRVQASIIKWYASEYHNGRQVLDEIQTPSAINSELYTKMIY
LTRNWSLYPNGDGCVTISSPEIKNKYPAAICLALGFFLSIVISVMFCLVKKMVDEYQQ
NSGQ"
misc_feature 274226..>274489
/gene="ykgH"
/locus_tag="SF0256"
/note="Capsular polysaccharide biosynthesis protein YveK
[Cell wall/membrane/envelope biogenesis]; Region: YveK;
COG3944"
/db_xref="CDD:443144"
gene 274946..275158
/locus_tag="SF0257"
/pseudo
/db_xref="GeneID:1024324"
misc_feature 274946..275158
/locus_tag="SF0257"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1786500 (71 aa). BLAST with
identity of 95% in 71 aa. This CDS ontains frameshift. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(275113..275955)
/gene="ykgG"
/locus_tag="SF0258"
/db_xref="GeneID:1025970"
CDS complement(275113..275955)
/gene="ykgG"
/locus_tag="SF0258"
/note="Code: S; COG: COG1556"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706211.4"
/db_xref="GeneID:1025970"
/translation="MRQAGLSMAAKHHSNLARLATGWKHAIFLKLTERVSVVGLRNIR
RRRKRMDNRSEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQF
ASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVV
WDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPESSLFILRK
STILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLI
IEDC"
misc_feature complement(275122..275805)
/gene="ykgG"
/locus_tag="SF0258"
/note="L-lactate utilization protein LutC, contains LUD
domain [Energy production and conversion]; Region: LutC;
COG1556"
/db_xref="CDD:441165"
gene complement(275801..277228)
/gene="ykgF"
/locus_tag="SF0259"
/db_xref="GeneID:1024288"
CDS complement(275801..277228)
/gene="ykgF"
/locus_tag="SF0259"
/note="Code: C; COG: COG1139"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706212.1"
/db_xref="GeneID:1024288"
/translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVASAQQRIGANRQKMVDE
LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVYFAKTKEDATRYILQVAQ
RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK
DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL
VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG
PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG
SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEK
GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR
DLPEADGESFRSWFKKHQAQEKKNG"
misc_feature complement(275870..277177)
/gene="ykgF"
/locus_tag="SF0259"
/note="iron-sulfur cluster-binding protein; Region:
TIGR00273"
/db_xref="CDD:129374"
gene complement(277239..277958)
/gene="ykgE"
/locus_tag="SF0260"
/db_xref="GeneID:1024322"
CDS complement(277239..277958)
/gene="ykgE"
/locus_tag="SF0260"
/note="Code: C; COG: COG0247"
/codon_start=1
/transl_table=11
/product="dehydrogenase subunit"
/protein_id="NP_706213.1"
/db_xref="GeneID:1024322"
/translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ
PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAIKSYPTYLADEPEWASRAE
KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL
ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVVHLMEVRPEYLIGADVSCLLNISG
RLQREGQKVKVMHIAEVLMSR"
misc_feature complement(277251..>277946)
/gene="ykgE"
/locus_tag="SF0260"
/note="Fe-S cluster-containing oxidoreductase, includes
glycolate oxidase subunit GlcF [Energy production and
conversion]; Region: GlpC; COG0247"
/db_xref="CDD:440017"
mobile_element 278322..279089
/mobile_element_type="insertion sequence:IS1"
gene 278377..278652
/gene="insA"
/locus_tag="SF0261"
/db_xref="GeneID:1027524"
CDS 278377..278652
/gene="insA"
/locus_tag="SF0261"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706214.1"
/db_xref="GeneID:1027524"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTVSQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 278398..>278649
/gene="insA"
/locus_tag="SF0261"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 278679..279074
/gene="insB"
/locus_tag="SF0262"
/db_xref="GeneID:1025742"
CDS 278679..279074
/gene="insB"
/locus_tag="SF0262"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706215.1"
/db_xref="GeneID:1025742"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 278682..279071
/gene="insB"
/locus_tag="SF0262"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 279259..279744
/locus_tag="SF0263"
/db_xref="GeneID:1024327"
CDS 279259..279744
/locus_tag="SF0263"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706216.1"
/db_xref="GeneID:1024327"
/translation="MRAIYLSVQQAWNGKITYSVSGESEFAKKFQGKALPFDVRIISA
SQNEDWLVIATKVLPGADLRTYVDFKNSTVHVDSAGLEKVAKCINCNNTLQVNIPHEA
GHVLGYLDDDYDSSSPYVGDISGLMNVGMELWERYLKNATITLNIIMPETKFTLLNVT
K"
gene 279741..280127
/locus_tag="SF0264"
/db_xref="GeneID:1025740"
CDS 279741..280127
/locus_tag="SF0264"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706217.1"
/db_xref="GeneID:1025740"
/translation="MKFFCIIVIFLSINYIAIVNVFKSSAVAQSTKYYEENDIHDGSN
DIFFMKKYGPPAHEFVRPRYKFVGEYYIGLNQTYRITDPEFQDVPIKEMFWNLQGDLN
LTCWFHYKDGQWRVITYIFWPPGARF"
gene 280152..282365
/locus_tag="SF0265"
/db_xref="GeneID:1024331"
CDS 280152..282365
/locus_tag="SF0265"
/note="Code: S; COG: COG3501"
/codon_start=1
/transl_table=11
/product="Rhs-family protein"
/protein_id="NP_706218.1"
/db_xref="GeneID:1024331"
/translation="MSFVSTGNKPVGNGGPVITTPPIAGESGGMSTGSAVTDVSGAAE
EMAEQAAADLFGALPEPSGLVKAAVAAAQAAAAAAGISDMAGAVQDAAASLAAGAPGA
HNVTVSGSAVPPQMLLFAGMNGSEGLGNLFSYTVQLKTLDALNLGYVSPAANLPLQLM
VGKDLCVSIELDGGGKRYISGLVTAARVVGHESRSVTYELRIEPWLKLLTHTSDYKAF
QNKTVVDILDEVLDEYSFPVEKRLVENYPPRAWQVQYGETDFDFIQRLMQEWGIYWWF
EHSENSHTLVLVDAINGHKACPDSPLVEWHQEGLKLDKEFIHTITASERLRTGKWVMD
DFDFMKPRSLLKSTVASPRDTGHAEYEHYEWPGDYFTTGEGEMLTRIRMEAQRSPGSR
AHGAGHIRTLMTGYTFTLMNHPTAEINQEYLLVQTTLFLRDNAQHSGQDQHFTYVTTF
ELHPTSEVYRPQRTLSKPHTKGPQSAIVTGPAGQEIWTDKYGRVKVQFGWDRYGKNDE
NSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGL
PGMASQSGIFSHSLQGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVD
RIKTIVKNETISVGEDRNATITKNDGLSVKLAQTINVGTTYRLDVGDQFTLRCGNAAL
VLHKDGSIEFCGKQLLLHTSDVMQLIGSGIDMNPDGGTAMTADDIAPLPTPDVSE"
misc_feature 280479..282335
/locus_tag="SF0265"
/note="Uncharacterized conserved protein VgrG, implicated
in type VI secretion and phage assembly [Intracellular
trafficking, secretion, and vesicular transport, Mobilome:
prophages, transposons, General function prediction only];
Region: VgrG; COG3501"
/db_xref="CDD:442724"
gene 282388..282833
/locus_tag="SF0260a"
/pseudogene="unknown"
/db_xref="GeneID:16608304"
gene 282855..283262
/locus_tag="SF0266"
/db_xref="GeneID:1024335"
CDS 282855..283262
/locus_tag="SF0266"
/codon_start=1
/transl_table=11
/product="Rhs-family protein"
/protein_id="NP_706219.1"
/db_xref="GeneID:1024335"
/translation="MYEAARVDDPIYHTSALAGFLIGAIIGIAIIAVASFAFFTCGFL
AGLILSFLADQIASGVLQLGEAIGRSIHSTVGKILTGSDNVSTNSRPAARAVLSTVIC
EDHSPEIRIAQGSGNIYINSQLPVRMTTLSVMQ"
misc_feature 283041..>283238
/locus_tag="SF0266"
/note="proline-alanine-alanine-arginine (PAAR) repeat
superfamily; Region: PAAR_like; cl21497"
/db_xref="CDD:451275"
gene 283259..285547
/locus_tag="SF0267"
/db_xref="GeneID:1024337"
CDS 283259..285547
/locus_tag="SF0267"
/codon_start=1
/transl_table=11
/product="Rhs-family protein"
/protein_id="NP_706220.1"
/db_xref="GeneID:1024337"
/translation="MIEDGSPNVFLGGGTQTVLEISPEIPDWLRQVVDVLYVVAGMLG
GLAGAWRQAAKMGSKFGTKCAAKFIGGEMVGMAISDTVMGLFSNPVDVTTGQKILLPE
TDFTLPGRLPVTCSRFYASHLETEGLLGRGWRLNWEINLREDETYITFIGVQGRELSY
PKEMLIPGHQIFDPEEQFYLSRLHDGCYVLHYTDRSYYVFDEFDDHGVAPLLFMETPY
RQRIAFGRENGRLVRVASSSGHHLLLHRTMTQAGERLSHIELLKGGRPGNLVEYRYDD
NGQLTGVVNRAGVTVRQFAYENGLMTEHRNATGFTCTYHWEEIEGFPRVVEHTTSDGE
DYRFHYDFAGGQTVVTGRPEQKWQWWFDEETYVTAHRTPGGGMYRFTYNENHFPVAVE
LPGERRVTLEYDTLSRVVKETDPAGRVTQTQWNGSFAEITRRALDDDHVWKADYNEHG
QVIRETDPEGRVTRYGYDDQGLPETVCHPGKQQDRYTWNALGLLSSHRRITGSVQSWQ
YTQRGMLARHTDEEKRETRWQYTPEGLVASLSNGNGAQYRFSYDGDGRLTGEQRPDGL
IRMFALNADGFPVIIPTQGTEGGVRNEQQERDALGRLLRSDTQHSTRTFSYNRLDQIT
EVTLTPTEEGERLHHMQADTVRFAYDRSGWLTAEHSVHGSIKYRRDALGNPTDITLPD
GQHLSHLYYGSGHLLQTALDGITVSEYERDSLHRQVIRTQGKLATFSGYNADNRLSWQ
RSLPGGSQNPQQAVLPRRRTTA"
misc_feature 283469..>285451
/locus_tag="SF0267"
/note="RHS element core protein; Region: RHS_core;
NF041261"
/db_xref="CDD:469161"
gene 285544..286533
/locus_tag="SF0268"
/db_xref="GeneID:1027427"
CDS 285544..286533
/locus_tag="SF0268"
/codon_start=1
/transl_table=11
/product="Rhs-family protein"
/protein_id="NP_706221.1"
/db_xref="GeneID:1027427"
/translation="MTARDYIWNADGEVGGINDKLRGCLVFSYDRSGWLTSRTGQMYD
HDHYYYDKAGNLLTDEYQGAVMDNRLPGYGRDRYRYNEWGELTERRDQQLEWNAQGQL
TRVISSNSETRYQYDALGRRISKATSNLHTDRGERSRTTFVWEGFRLLQETTWQGKRT
YLYDAEQPYTPVAAITGRGESQKIWYYHTDLTGTVHEVTAPDGTLVWAGYQAGFGENR
GDISNSGAYFEQPQRLPGQYFDEETGLHYNLFRYYAPECGRFVSQDPIGLNGGLNLYA
YAPNPLGWIDPLGLNSLGIDSNNIFRGDGNYKGGGIGQPKSGTISAQDIIDHL"
misc_feature <285553..286413
/locus_tag="SF0268"
/note="RHS element core protein; Region: RHS_core;
NF041261"
/db_xref="CDD:469161"
gene complement(287582..288352)
/gene="yafV"
/locus_tag="SF0269"
/db_xref="GeneID:1027438"
CDS complement(287582..288352)
/gene="yafV"
/locus_tag="SF0269"
/note="Code: R; COG: COG0388; EC 3.5. amidase-type enzyme"
/codon_start=1
/transl_table=11
/product="C-N hydrolase amidase"
/protein_id="NP_706222.2"
/db_xref="GeneID:1027438"
/translation="MPSLKITLLQQPLVWVDGPANLRHFDRQLEGITGRDVIVLPEMF
TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAL
YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
TADAHKATRIDAELSMVALREYREKFPAWRDADEFRLW"
misc_feature complement(287585..288352)
/gene="yafV"
/locus_tag="SF0269"
/note="C-N hydrolase family amidase; Provisional; Region:
PRK10438"
/db_xref="CDD:182461"
misc_feature complement(order(287858..287863,287918..287923,
287927..287932,288005..288007,288020..288022,
288032..288034,288209..288211,288227..288229))
/gene="yafV"
/locus_tag="SF0269"
/note="putative active site [active]"
/db_xref="CDD:143599"
misc_feature complement(order(287930..287932,288032..288034,
288227..288229))
/gene="yafV"
/locus_tag="SF0269"
/note="catalytic triad [active]"
/db_xref="CDD:143599"
misc_feature complement(order(287594..287611,287615..287626,
287663..287665,287669..287674,287678..287680,
287690..287716,287720..287722,287804..287809,
287813..287821,287825..287830,287837..287842,
287900..287902,287906..287920,287927..287929,
288014..288016,288026..288031))
/gene="yafV"
/locus_tag="SF0269"
/note="multimer interface [polypeptide binding]; other
site"
/db_xref="CDD:143599"
misc_feature complement(order(287594..287611,287615..287626,
287708..287716,287804..287809,287813..287821,
287825..287830,287837..287842,287900..287902,
287906..287920,287927..287929,288014..288016,
288026..288031))
/gene="yafV"
/locus_tag="SF0269"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143599"
gene 288506..288979
/gene="ykfE"
/locus_tag="SF0270"
/db_xref="GeneID:1025754"
CDS 288506..288979
/gene="ykfE"
/locus_tag="SF0270"
/codon_start=1
/transl_table=11
/product="C-lysozyme inhibitor"
/protein_id="NP_706223.1"
/db_xref="GeneID:1025754"
/translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK
AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK
SNQMTGLFSAIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
misc_feature 288518..288976
/gene="ykfE"
/locus_tag="SF0270"
/note="C-lysozyme inhibitor; Provisional; Region:
PRK09993"
/db_xref="CDD:182187"
gene complement(289022..291502)
/gene="yafH"
/locus_tag="SF0271"
/db_xref="GeneID:1025972"
CDS complement(289022..291502)
/gene="yafH"
/locus_tag="SF0271"
/note="Code: I; COG: COG1960"
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase"
/protein_id="NP_706224.4"
/db_xref="GeneID:1025972"
/translation="MVRPPTSKGLFVMMILSILATVVLLGALFYHRVSLFISSLILLA
WTAALGVAGLWSAWVLVPLTIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEA
IDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHEL
ADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNS
LGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQ
GQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGV
EIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPS
NSTGGVKSVALATGAYSHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGI
MLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITV
EGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSF
WLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMALLGGSLKRRERISARLG
DILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDNLLQNFPNRVVAG
LLNVVIFPTGRHYLAPSDKLDHKMAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEA
LVDVIAADPIHQRICKELGKNLPFTRLDELAHNALTKGLIDKDEAAILVKAEESRLRS
INVDDFDPEELATKPVKLPEKVRKVEAA"
misc_feature complement(289025..291460)
/gene="yafH"
/locus_tag="SF0271"
/note="acyl-CoA dehydrogenase FadE; Region: FadE_coli;
NF038187"
/db_xref="CDD:439499"
gene 291706..292284
/gene="gmhA"
/locus_tag="SF0272"
/db_xref="GeneID:1027423"
CDS 291706..292284
/gene="gmhA"
/locus_tag="SF0272"
/note="Code: G; COG: COG0279"
/codon_start=1
/transl_table=11
/product="phosphoheptose isomerase"
/protein_id="NP_706225.2"
/db_xref="GeneID:1027423"
/translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
misc_feature 291706..292281
/gene="gmhA"
/locus_tag="SF0272"
/note="D-sedoheptulose 7-phosphate isomerase; Region:
gmhA; PRK00414"
/db_xref="CDD:179012"
misc_feature order(291742..291744,291754..291756,291796..291798,
291805..291807,291865..291867,291883..291888,
292219..292224,292234..292236,292243..292245,
292255..292257,292267..292269)
/gene="gmhA"
/locus_tag="SF0272"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:240139"
misc_feature order(291859..291867,292060..292068,292075..292077,
292204..292206,292219..292221)
/gene="gmhA"
/locus_tag="SF0272"
/note="active site"
/db_xref="CDD:240139"
gene 292490..293257
/gene="yafJ"
/locus_tag="SF0273"
/db_xref="GeneID:1027404"
CDS 292490..293257
/gene="yafJ"
/locus_tag="SF0273"
/note="Code: R; COG: COG0121"
/codon_start=1
/transl_table=11
/product="amidotransferase"
/protein_id="NP_706226.2"
/db_xref="GeneID:1027404"
/translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
SLADELRAKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV"
misc_feature 292490..293245
/gene="yafJ"
/locus_tag="SF0273"
/note="Glutamine amidotransferases class-II; Region:
GATase_4; pfam13230"
/db_xref="CDD:433047"
misc_feature order(292493..292495,292724..292726,292811..292819,
292874..292876)
/gene="yafJ"
/locus_tag="SF0273"
/note="putative active site [active]"
/db_xref="CDD:238889"
misc_feature order(292628..292630,292637..292642,292775..292777,
292847..292852,292913..292915)
/gene="yafJ"
/locus_tag="SF0273"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:238889"
gene complement(293228..293968)
/gene="yafK"
/locus_tag="SF0274"
/db_xref="GeneID:1025752"
CDS complement(293228..293968)
/gene="yafK"
/locus_tag="SF0274"
/note="Code: S; COG: COG3034"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706227.1"
/db_xref="GeneID:1025752"
/translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV
YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVAN
GRYVVSKPLSHEVVQPQLASNYTLPEAK"
misc_feature complement(293231..293968)
/gene="yafK"
/locus_tag="SF0274"
/note="peptidoglycan meso-diaminopimelic acid protein
amidase; Region: LdtF_DpaA_YafK; NF040599"
/db_xref="CDD:468573"
gene 294319..294873
/gene="yafL"
/locus_tag="SF0275"
/pseudo
/db_xref="GeneID:1027639"
misc_feature 294319..294873
/gene="yafL"
/locus_tag="SF0275"
/note="Similar to Escherichia coli K12 lipoprotein gi:
1786421 (250 aa). BLAST with identity of 93% in 176 aa.
This CDS has been truncated. The sequence has been checked
and is believed to be correct."
/pseudo
gene 295049..295546
/gene="yafM"
/locus_tag="SF0276"
/db_xref="GeneID:1025753"
CDS 295049..295546
/gene="yafM"
/locus_tag="SF0276"
/note="Code: L; COG: COG1943"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706228.1"
/db_xref="GeneID:1025753"
/translation="MSEYRRYYIKGGTWFFTVNLRNRRSHLLTTQFQTLRNAIINVKR
DRPFEINAWVVLPEHMHCIWTLPESDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHA
IRNTKDYRHHVDYIYINPEKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDITDLSAG
ERIIL"
misc_feature 295049..295447
/gene="yafM"
/locus_tag="SF0276"
/note="REP element-mobilizing transposase RayT [Mobilome:
prophages, transposons]; Region: RAYT; COG1943"
/db_xref="CDD:441546"
gene complement(295763..297502)
/gene="fhiA"
/locus_tag="SF0278"
/db_xref="GeneID:1027425"
CDS complement(295763..297502)
/gene="fhiA"
/locus_tag="SF0278"
/note="Code: N; COG: COG1298"
/codon_start=1
/transl_table=11
/product="flagellar biosynthetic protein FlhA"
/protein_id="NP_706229.1"
/db_xref="GeneID:1027425"
/translation="MLSRSDLLTLLTINFIVVTKEAERISEVSARFTLDAMPGKQMAI
DADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLSGGVC
IGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRH
QLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSL
ETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVIS
DGNGVLLPEIRIRENFRLKPSQYAIFINGIEADEADIPADKLMALPSSETYGEIDGVL
GNDPAYGIPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQ
LHNRLSSMAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTVTKD
HILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQAGKVMLDSVP
VDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLPRYARLFAPGLHVLSYNEV
PDELELKIMGALM"
misc_feature complement(295775..297475)
/gene="fhiA"
/locus_tag="SF0278"
/note="Flagellar biosynthesis protein FlhA [Cell
motility]; Region: FlhA; COG1298"
/db_xref="CDD:440909"
gene 297447..298232
/gene="mbhA"
/locus_tag="SF0277"
/db_xref="GeneID:1027430"
CDS 297447..298232
/gene="mbhA"
/locus_tag="SF0277"
/note="Code: N; COG: COG1360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706230.2"
/db_xref="GeneID:1027430"
/translation="MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSH
PPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEME
IVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLYNKIIITGHTDAMA
YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRI
EIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRMR"
misc_feature 297447..298208
/gene="mbhA"
/locus_tag="SF0277"
/note="hypothetical protein; Validated; Region: PRK06778"
/db_xref="CDD:235860"
gene 298303..299358
/gene="dinP"
/locus_tag="SF0279"
/db_xref="GeneID:1025748"
CDS 298303..299358
/gene="dinP"
/locus_tag="SF0279"
/note="Code: L; COG: COG0389"
/codon_start=1
/transl_table=11
/product="DNA polymerase IV"
/protein_id="NP_706231.1"
/db_xref="GeneID:1025748"
/translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA
NYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSL
DEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNG
QFVITPAEVPAFLQTLPLEKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKF
GRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAK
VKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGL
HVTLLDPQMERQLVLGL"
misc_feature 298327..299355
/gene="dinP"
/locus_tag="SF0279"
/note="DNA polymerase IV; Validated; Region: PRK02406"
/db_xref="CDD:235035"
gene 299410..299703
/gene="yafN"
/locus_tag="SF0280"
/db_xref="GeneID:1024294"
CDS 299410..299703
/gene="yafN"
/locus_tag="SF0280"
/codon_start=1
/transl_table=11
/product="antitoxin of the YafO-YafN toxin-antitoxin
system"
/protein_id="NP_706232.1"
/db_xref="GeneID:1024294"
/translation="MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSAS
AFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAKQYLNDMTDDDFNDFKE"
misc_feature 299410..299700
/gene="yafN"
/locus_tag="SF0280"
/note="type I toxin-antitoxin system antitoxin YafN;
Region: PRK09778"
/db_xref="CDD:170091"
gene 299706..300104
/gene="yafO"
/locus_tag="SF0281"
/db_xref="GeneID:1025744"
CDS 299706..300104
/gene="yafO"
/locus_tag="SF0281"
/codon_start=1
/transl_table=11
/product="toxin YafO"
/protein_id="NP_706233.1"
/db_xref="GeneID:1025744"
/translation="MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALY
DDSFTWPLIKFERVAHIHLANVNNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIA
ILKPEPHKLARDNNQMHKIGKMAEAFRMRF"
misc_feature 299706..300101
/gene="yafO"
/locus_tag="SF0281"
/note="type II toxin-antitoxin system YafO family toxin;
Region: PRK09885"
/db_xref="CDD:236631"
gene 300114..300566
/gene="yafP"
/locus_tag="SF0282"
/db_xref="GeneID:1025743"
CDS 300114..300566
/gene="yafP"
/locus_tag="SF0282"
/note="Code: KR; COG: COG0454"
/codon_start=1
/transl_table=11
/product="acyltransferase"
/protein_id="NP_706234.1"
/db_xref="GeneID:1025743"
/translation="MNNIQIRDYQPGDFQQLCAIFIRAVTMTVSQHYSLQQIAAWAQI
DESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPFIK
SESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFINFYMRYKPQH"
misc_feature 300123..300563
/gene="yafP"
/locus_tag="SF0282"
/note="GNAT family N-acetyltransferase; Region: PRK09831"
/db_xref="CDD:182099"
misc_feature order(300354..300362,300390..300395)
/gene="yafP"
/locus_tag="SF0282"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 300812..301855
/locus_tag="SF0283"
/db_xref="GeneID:1024289"
CDS 300812..301855
/locus_tag="SF0283"
/note="Code: S; COG: COG1690"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706235.2"
/db_xref="GeneID:1024289"
/translation="MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVG
MPDLHPGRGYPIGAAFFSAGRFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSA
LDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDA
QHLQLLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALAFARFNRHLIALRIMQQVK
ATGSPVLDVAHNFVSACRIGDQQGVLHRKGATPDDCGLVVIPGSRGDYSRLVQPVRSE
ETLHSLAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYK
SAESVVQCQGRPD"
misc_feature 300812..301852
/locus_tag="SF0283"
/note="hypothetical protein; Reviewed; Region: PRK09588"
/db_xref="CDD:181972"
gene 301917..302531
/locus_tag="SF0284"
/pseudogene="unknown"
/db_xref="GeneID:1027431"
gene complement(302588..304045)
/gene="pepD"
/locus_tag="SF0285"
/db_xref="GeneID:1027527"
CDS complement(302588..304045)
/gene="pepD"
/locus_tag="SF0285"
/note="Code: E; COG: COG2195"
/codon_start=1
/transl_table=11
/product="aminoacyl-histidine dipeptidase"
/protein_id="NP_706237.1"
/db_xref="GeneID:1027527"
/translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
FHVERDQVGNILIRQPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
misc_feature complement(302591..304045)
/gene="pepD"
/locus_tag="SF0285"
/note="aminoacyl-histidine dipeptidase; Provisional;
Region: PRK15026"
/db_xref="CDD:184986"
misc_feature complement(order(302900..302905,302912..302917,
302924..302926,303035..303040,303047..303049,
303068..303073,303077..303082,303176..303178,
303188..303190,303347..303349,303377..303379))
/gene="pepD"
/locus_tag="SF0285"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:349885"
gene 304307..304765
/gene="gpt"
/locus_tag="SF0286"
/db_xref="GeneID:1024293"
CDS 304307..304765
/gene="gpt"
/locus_tag="SF0286"
/note="Code: F; COG: COG0503"
/codon_start=1
/transl_table=11
/product="xanthine-guanine phosphoribosyltransferase"
/protein_id="NP_706238.1"
/db_xref="GeneID:1024293"
/translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
misc_feature 304307..304762
/gene="gpt"
/locus_tag="SF0286"
/note="xanthine-guanine phosphoribosyltransferase;
Validated; Region: PRK09177"
/db_xref="CDD:236395"
misc_feature order(304412..304414,304418..304420,304568..304576,
304580..304594,304649..304651)
/gene="gpt"
/locus_tag="SF0286"
/note="active site"
/db_xref="CDD:206754"
gene 304857..306101
/gene="frsA"
/locus_tag="SF0287"
/db_xref="GeneID:1027422"
CDS 304857..306101
/gene="frsA"
/locus_tag="SF0287"
/note="Code: R; COG: COG1073"
/codon_start=1
/transl_table=11
/product="fermentation/respiration switch protein"
/protein_id="NP_706239.1"
/db_xref="GeneID:1027422"
/translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
TQAMVWQQKACTEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
PVYRNFDKGLQEITGWIEKRLC"
misc_feature 304857..306098
/gene="frsA"
/locus_tag="SF0287"
/note="esterase FrsA; Region: frsA; PRK05077"
/db_xref="CDD:235337"
gene 306159..306560
/gene="crl"
/locus_tag="SF0288"
/db_xref="GeneID:1024314"
CDS 306159..306560
/gene="crl"
/locus_tag="SF0288"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator Crl"
/protein_id="NP_706240.1"
/db_xref="GeneID:1024314"
/translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
FHEKLRELLTTLNLKLEPANDFRDEPVKLTA"
misc_feature 306159..306539
/gene="crl"
/locus_tag="SF0288"
/note="sigma factor-binding protein Crl; Region: PRK10984"
/db_xref="CDD:182882"
gene complement(306599..307654)
/gene="phoE"
/locus_tag="SF0289"
/db_xref="GeneID:1027629"
CDS complement(306599..307654)
/gene="phoE"
/locus_tag="SF0289"
/note="Code: M; COG: COG3203"
/codon_start=1
/transl_table=11
/product="outer membrane phosphoporin protein E"
/protein_id="NP_706241.2"
/db_xref="GeneID:1027629"
/translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
SDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
DFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
LNINNDDTVAVGMTYQF"
misc_feature complement(306602..307654)
/gene="phoE"
/locus_tag="SF0289"
/note="phosphoporin PhoE; Region: PRK10159"
/db_xref="CDD:182275"
misc_feature complement(order(306602..306604,306608..306610,
306614..306616,306701..306703,306710..306715,
307205..307210,307214..307216,307313..307321,
307349..307363,307367..307372,307403..307414,
307418..307420,307424..307432,307436..307438,
307454..307468,307529..307537,307541..307543,
307559..307561,307565..307567))
/gene="phoE"
/locus_tag="SF0289"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238208"
misc_feature complement(order(307214..307216,307274..307276,
307367..307369,307481..307483,307544..307546))
/gene="phoE"
/locus_tag="SF0289"
/note="eyelet of channel [active]"
/db_xref="CDD:238208"
mobile_element 307775..308542
/mobile_element_type="insertion sequence:IS1"
gene 307830..308105
/gene="insA"
/locus_tag="SF0290"
/db_xref="GeneID:1027432"
CDS 307830..308105
/gene="insA"
/locus_tag="SF0290"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706242.1"
/db_xref="GeneID:1027432"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTVSQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 307851..>308102
/gene="insA"
/locus_tag="SF0290"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 308132..308527
/gene="insB"
/locus_tag="SF0291"
/db_xref="GeneID:1027636"
CDS 308132..308527
/gene="insB"
/locus_tag="SF0291"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706243.1"
/db_xref="GeneID:1027636"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 308135..308524
/gene="insB"
/locus_tag="SF0291"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 308718..309821
/gene="proB"
/locus_tag="SF0292"
/db_xref="GeneID:1027426"
CDS 308718..309821
/gene="proB"
/locus_tag="SF0292"
/note="Code: E; COG: COG0263"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl kinase"
/protein_id="NP_706244.2"
/db_xref="GeneID:1027426"
/translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
GADKLLLLTDQKGLYTADPRRNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
misc_feature 308730..309815
/gene="proB"
/locus_tag="SF0292"
/note="glutamate 5-kinase; Region: proB; TIGR01027"
/db_xref="CDD:162163"
gene 309833..311086
/gene="proA"
/locus_tag="SF0293"
/db_xref="GeneID:1024291"
CDS 309833..311086
/gene="proA"
/locus_tag="SF0293"
/note="Code: E; COG: COG0014"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl phosphate reductase"
/protein_id="NP_706245.1"
/db_xref="GeneID:1024291"
/translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
TGGIGVCHIYVDESAEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
MAESGVTLHADAAALTQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
EHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
ARGPMGLEALTTYKWIGIGDYTIRA"
misc_feature 309833..311083
/gene="proA"
/locus_tag="SF0293"
/note="gamma-glutamyl phosphate reductase; Provisional;
Region: proA; PRK00197"
/db_xref="CDD:234685"
misc_feature 310589..310591
/gene="proA"
/locus_tag="SF0293"
/note="putative catalytic cysteine [active]"
/db_xref="CDD:143398"
gene 311201..311276
/locus_tag="SF4443"
/db_xref="GeneID:3161801"
tRNA 311201..311276
/locus_tag="SF4443"
/product="tRNA-Thr"
/codon_recognized="ACG"
/db_xref="GeneID:3161801"
gene complement(311291..311755)
/locus_tag="SF0294"
/db_xref="GeneID:1027631"
CDS complement(311291..311755)
/locus_tag="SF0294"
/codon_start=1
/transl_table=11
/product="phage integrase"
/protein_id="NP_706246.1"
/db_xref="GeneID:1027631"
/translation="MPVHLKESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESC
TKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQ
EMGGWESIEMVRRYAHLAPNHLTEHARQIDLILNPSVPNLSQSRNKEGTNDV"
misc_feature complement(311402..>311749)
/locus_tag="SF0294"
/note="Shufflon-specific DNA recombinase Rci and
Bacteriophage Hp1_like integrase, C-terminal catalytic
domain; Region: INT_Rci_Hp1_C; cd00796"
/db_xref="CDD:271177"
misc_feature complement(order(311408..311410,311501..311506,
311513..311515))
/locus_tag="SF0294"
/note="active site"
/db_xref="CDD:271177"
mobile_element complement(311740..313002)
/mobile_element_type="insertion sequence:IS600"
gene complement(311782..312600)
/locus_tag="SF0295"
/db_xref="GeneID:1027528"
CDS complement(311782..312600)
/locus_tag="SF0295"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706247.1"
/db_xref="GeneID:1027528"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(311809..>312600)
/locus_tag="SF0295"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(312636..312938)
/locus_tag="SF0296"
/db_xref="GeneID:1027623"
CDS complement(312636..312938)
/locus_tag="SF0296"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706248.1"
/db_xref="GeneID:1027623"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(312666..312938)
/locus_tag="SF0296"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(312995..313720)
/locus_tag="SF0297"
/db_xref="GeneID:1027632"
CDS complement(312995..313720)
/locus_tag="SF0297"
/note="Code: L; COG: COG0582"
/codon_start=1
/transl_table=11
/product="phage integrase"
/protein_id="NP_706249.1"
/db_xref="GeneID:1027632"
/translation="MSLFRRGEIWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAE
AWRVSKLGEIPDITFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGIQLRDITESK
IYSAMQKMTNRRHEENWKLRAESCRKKGKPVPEYTPKPASVATKATHLSFIKALLRAA
EREWKMLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSN
IINLEWQQINMQRRVAWINPEVR"
misc_feature complement(<313010..313552)
/locus_tag="SF0297"
/note="Site-specific recombinase XerD [Replication,
recombination and repair]; Region: XerD; COG4974"
/db_xref="CDD:443999"
gene complement(313947..314252)
/gene="yfdT"
/locus_tag="SF0298"
/db_xref="GeneID:1027624"
CDS complement(313947..314252)
/gene="yfdT"
/locus_tag="SF0298"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706250.1"
/db_xref="GeneID:1027624"
/translation="MTTFTDKELIKEIKERISSLDVRDDIERRAYEIALLSLEVEPDE
REAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIVWQQRAGIHFSTMSQQEVK"
gene complement(314252..314629)
/locus_tag="SF0299"
/db_xref="GeneID:1027628"
CDS complement(314252..314629)
/locus_tag="SF0299"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706251.1"
/db_xref="GeneID:1027628"
/translation="MLPSETMICQPEFTDKTLSRKPGAVQKVNETDAEYLVRKFDELE
AKCAAQENKVIPVSTELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQ
VGDLENVNITHWAVMPKAPEAGA"
mobile_element complement(314553..315858)
/mobile_element_type="insertion sequence:IS629"
gene complement(314595..315478)
/locus_tag="SF0300"
/pseudogene="unknown"
/db_xref="GeneID:1025976"
gene complement(315478..315804)
/locus_tag="SF0301"
/db_xref="GeneID:1027437"
CDS complement(315478..315804)
/locus_tag="SF0301"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706253.1"
/db_xref="GeneID:1027437"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature complement(315514..315801)
/locus_tag="SF0301"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 315983..317246
/mobile_element_type="insertion sequence:IS600"
gene 316047..316349
/locus_tag="SF0302"
/db_xref="GeneID:1027433"
CDS 316047..316349
/locus_tag="SF0302"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706254.1"
/db_xref="GeneID:1027433"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 316047..316319
/locus_tag="SF0302"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 316385..317203
/locus_tag="SF0303"
/db_xref="GeneID:1027634"
CDS 316385..317203
/locus_tag="SF0303"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706255.1"
/db_xref="GeneID:1027634"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKPEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <316385..317176
/locus_tag="SF0303"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 317867..318229
/gene="gtrAI"
/locus_tag="SF0305"
/db_xref="GeneID:1027630"
CDS 317867..318229
/gene="gtrAI"
/locus_tag="SF0305"
/codon_start=1
/transl_table=11
/product="flippase"
/protein_id="NP_706257.1"
/db_xref="GeneID:1027630"
/translation="MLKLFVKYTSIGVLNTLIHWVVFGVCIYAAHTSQALANFTGFVV
AVSFSFFANARFTFKALTTAMRYMLYVGFMGILSVIVGWAADKCSLPPIVTLITFSAI
SLVCGFVYSKFIVFRDAK"
misc_feature 317867..318226
/gene="gtrAI"
/locus_tag="SF0305"
/note="Putative flippase GtrA (transmembrane translocase
of bactoprenol-linked glucose) [Lipid transport and
metabolism]; Region: GtrA; COG2246"
/db_xref="CDD:441847"
gene 318226..319155
/gene="gtrBI"
/locus_tag="SF0306"
/db_xref="GeneID:1025741"
CDS 318226..319155
/gene="gtrBI"
/locus_tag="SF0306"
/note="Code: M; COG: COG0463"
/codon_start=1
/transl_table=11
/product="bactoprenol glucosyl transferase"
/protein_id="NP_706258.1"
/db_xref="GeneID:1025741"
/translation="MKISLVVPVFNEEEAIPVFYKTVREFQELKPYEVEIVFINDGSK
DATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVI
PHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMS
REVVENIKLLPERNLFMKGILSWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGI
TSFSTFPLRVWTYIGLFVASISFLYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQL
IGIGVLGEYIGRIYIEVKNRPKYIIKKSHRGNP"
misc_feature 318238..318780
/gene="gtrBI"
/locus_tag="SF0306"
/note="Bacterial DPM1_like enzymes are related to
eukaryotic DPM1; Region: DPM1_like_bac; cd04187"
/db_xref="CDD:133030"
misc_feature order(318247..318249,318253..318255,318505..318507)
/gene="gtrBI"
/locus_tag="SF0306"
/note="Ligand binding site [active]"
/db_xref="CDD:133030"
misc_feature order(318346..318348,318502..318507)
/gene="gtrBI"
/locus_tag="SF0306"
/note="Putative Catalytic site [active]"
/db_xref="CDD:133030"
misc_feature 318499..318507
/gene="gtrBI"
/locus_tag="SF0306"
/note="DXD motif [active]"
/db_xref="CDD:133030"
gene 319152..320612
/gene="gtrII"
/locus_tag="SF0307"
/db_xref="GeneID:1025749"
CDS 319152..320612
/gene="gtrII"
/locus_tag="SF0307"
/codon_start=1
/transl_table=11
/product="glucosyl transferase II"
/protein_id="NP_706259.1"
/db_xref="GeneID:1025749"
/translation="MIKINLLKNANLLAFISCFAISIYCYWGWLYDGTLNIDGEFTNN
FYQTITLGRWFHTFLRHYFLPEPFSLYITPLIALSFIIISAFIICRSLKLESYELLIG
MLVFITFPQISYQLEFLNQADTVGIAFLLAAISAIIFHSQKNRIVIFSGIVLSILSMA
IYQTFVTYIIAFVIGLQINSIIRNEKNIRESFYSSCLSLSLIALSTLIYLLLTKAIKH
YFSLESNEYISNYIQNASDIKWLVKSAIDNIYNFYNNPPTGLNLYKWLLIPLLILMFT
LTYKLKTRSIYLISSIIFIYILPVIFIVVVGSGAPPRLFVLMPIVAVILFSCLSNFRS
IKYLNCMFFLFIIFNGVSTSKNLFLNDTLARQKDISLAKEISYTSQTKGISLNGKYIY
IYGSNDSGNMLSMSADTFGKSFFWWDGGNYFRMVAFMNYYGICNCKPANKEQIEKIYP
IVKSLPSWPNPDSIAEINGLVIIKLSEKKGWLPFNI"
misc_feature 319251..320129
/gene="gtrII"
/locus_tag="SF0307"
/note="Glucosyl transferase GtrII; Region:
Glucos_trans_II; cl23811"
/db_xref="CDD:451558"
gene complement(321002..322192)
/locus_tag="SF0308"
/db_xref="GeneID:1027626"
CDS complement(321002..322192)
/locus_tag="SF0308"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706260.1"
/db_xref="GeneID:1027626"
/translation="MPARKVCQTFFRNALASTHQYRQNAIIDSAAALVGGASLSLTSI
GRHLPGPARVKDKIKRVDCLLGNKRLHNDIPLIFKNITSMMTNKLSWCVIAVDWSGYP
FQEYHVLRASLLCDGRSIPLMSQVFPSKKNNEAVEIAFLDALSGAISPRTRVVIVTDA
GFQSAWFRHIKSQGWDFIGRIRGVVKFRLDSDKDKWLDIKMCRGSSEAKYLGTGTLAR
KKRSQCEGHFYLYKHSPKGRKSRRARGRPGLPTTEKEQKAAGREPWLIFSNTAEFNAK
KIMKLYSRRMQIEQNFRDEKSERFGFGLRASRSRRGERFLVLSLLVTLASIVLWLLGY
HFENKGFHLKYQANSLKKRRVLSFLTLAENVLRFNPELLRRAQPEKILCRLASTYRSM
VLAY"
misc_feature complement(321020..322078)
/locus_tag="SF0308"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
mobile_element 322158..322274
/note="partial"
/mobile_element_type="insertion sequence:ISSfl3"
gene 322643..323692
/locus_tag="SF0309"
/db_xref="GeneID:1025747"
CDS 322643..323692
/locus_tag="SF0309"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706261.1"
/db_xref="GeneID:1025747"
/translation="MYNNKIDSNRKIRHDWVDALKFLGIFAIYLGHLGLGAGKLYPFV
FSYHVPLFFFAAGFFTIKKNDLSVFDYIKSKFYRLMIPYFTFAFSILIINTINSGETI
DYIYNHIYDIIYGVRNNQFVGTIWFINCLFVIIAIDAIFREIVKNNIVILIISLLSFM
LSQTVLNHNPLLDPQWFWNIDSAMAYWWLLPLGRCMFLELTRDRFFGKSKIGFIVFSI
TAIMSAYQLLNQKPLLFKIISIFNADIISSSYIQAINTIITTVGLIIFNIFIAKIICG
NDFIVRAGRNTLNICGMEYITKLFIPMALAIIGFSVTIPNPICAIIYTCICVYVSDKI
GHWLSRTVGGPFLIK"
misc_feature 322664..323512
/locus_tag="SF0309"
/note="Fucose 4-O-acetylase or related acetyltransferase
[Carbohydrate transport and metabolism]; Region: NolL;
cl46764"
/db_xref="CDD:481104"
gene complement(324465..324899)
/locus_tag="SF0310"
/db_xref="GeneID:1027428"
CDS complement(324465..324899)
/locus_tag="SF0310"
/codon_start=1
/transl_table=11
/product="phage tail fiber protein"
/protein_id="NP_706262.1"
/db_xref="GeneID:1027428"
/translation="MRITLQWDINKMSYFYSASTNGFYSTEFHGTNIPDDAVEISESE
WKTLINAQSVTKMITCGENGHPVIVDRPSPTPEQLALINDEKKSALIAEATNVIAPLQ
DAVDLGMATDDETKLLLAWKKYRVLLMRVNVVKPEWPMHPNK"
misc_feature complement(324471..324803)
/locus_tag="SF0310"
/note="Caudovirales tail fibre assembly protein, lambda
gpK; Region: Caudo_TAP; cl17077"
/db_xref="CDD:450149"
gene complement(324871..325521)
/locus_tag="SF0311"
/db_xref="GeneID:1025750"
CDS complement(324871..325521)
/locus_tag="SF0311"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706263.1"
/db_xref="GeneID:1025750"
/translation="MHRIDTKTAKKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQ
EELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVKTALENLGLGEA
AKRNVGTGANQIPDMSLFASINTVTAAAQKFPSGLILQCGQLNGAPNVSSTYGMRFPM
TFSRVIAVVVTLNVTGAAGQPTVSATSVQNTGFNITVSPGSGYGSSADAYYIAMGY"
mobile_element complement(325531..326794)
/mobile_element_type="insertion sequence:IS600"
gene complement(325574..326392)
/locus_tag="SF0312"
/db_xref="GeneID:1027656"
CDS complement(325574..326392)
/locus_tag="SF0312"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706264.1"
/db_xref="GeneID:1027656"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(325601..>326392)
/locus_tag="SF0312"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(326428..326730)
/locus_tag="SF0313"
/db_xref="GeneID:1027526"
CDS complement(326428..326730)
/locus_tag="SF0313"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706265.1"
/db_xref="GeneID:1027526"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATVYFAQESLKNTR"
misc_feature complement(326458..326730)
/locus_tag="SF0313"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 326916..328079
/locus_tag="SF0314"
/db_xref="GeneID:1027429"
CDS 326916..328079
/locus_tag="SF0314"
/note="Code: L; COG: COG0582"
/codon_start=1
/transl_table=11
/product="phage integrase"
/protein_id="NP_706266.1"
/db_xref="GeneID:1027429"
/translation="MSLFRRGEIWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAE
AWRVSKLGEIPDITFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLRDITESK
IYSAMQKMTNRRHEENWRLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAA
EREWKMLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSN
IINLEWQQIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKES
CTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVL
QEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNSSQSKNKEGTNDV"
misc_feature 327084..328010
/locus_tag="SF0314"
/note="Site-specific recombinase XerD [Replication,
recombination and repair]; Region: XerD; COG4974"
/db_xref="CDD:443999"
gene 328428..329600
/locus_tag="SF0315"
/db_xref="GeneID:1025746"
CDS 328428..329600
/locus_tag="SF0315"
/codon_start=1
/transl_table=11
/product="acyltransferase"
/protein_id="NP_706267.1"
/db_xref="GeneID:1025746"
/translation="MHMIEINSLLLITSVILMSLLAVGLFDKISPINLVEHGRNNQID
GMRGFLAIFVLIHHAAIWNGYLSSGVWEAPSSNLLANLGQVGVSFFFMITGYLFFSKI
ISGDQDWTRLYVSRLLRLTPMFIVSLCLIFIIVGFKSGWRMQVSTEELFVSIMKWLPF
TALGMPNINDVKDSFTINAAVTWTLVYEWFFYFSLPVISALIKRKVSIYMVMISAISL
FVFILFFSKIHIASFLFGLLAFLLNKSKIVNGIAKAKVTPIIITAIMVFEMTYFKTTY
APLPLILCGITFIIIASGCDLYGILRLNITRKLGETTYSVYLLHGIFLYCLMTWIIPN
NYTENTFIILVSTTAFLITFTSCLTFKLIETPFIKLTKQTTTLVKELIPTLTNNNQ"
misc_feature 328536..329537
/locus_tag="SF0315"
/note="Peptidoglycan/LPS O-acetylase OafA/YrhL, contains
acyltransferase and SGNH-hydrolase domains [Cell
wall/membrane/envelope biogenesis]; Region: OafA; COG1835"
/db_xref="CDD:441440"
mobile_element complement(330362..331545)
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene complement(330404..331222)
/locus_tag="SF0317"
/db_xref="GeneID:1025978"
CDS complement(330404..331222)
/locus_tag="SF0317"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706269.1"
/db_xref="GeneID:1025978"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKPEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(330431..>331222)
/locus_tag="SF0317"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(331258..331620)
/locus_tag="SF0318"
/db_xref="GeneID:1027642"
CDS complement(331258..331620)
/locus_tag="SF0318"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706270.1"
/db_xref="GeneID:1027642"
/translation="MLPSETMIWQPEFTDKTLSRKPGAVQRYSKEFKAEAVRTVLENQ
LSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTLAELESEILQLRKALNEARLERD
ILKKATAYFAQESLKNTR"
misc_feature complement(331288..331542)
/locus_tag="SF0318"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element complement(331544..332849)
/mobile_element_type="insertion sequence:IS629"
gene complement(331586..332469)
/locus_tag="SF0319"
/pseudogene="unknown"
/db_xref="GeneID:1027657"
gene complement(332469..332795)
/locus_tag="SF0320"
/db_xref="GeneID:1027649"
CDS complement(332469..332795)
/locus_tag="SF0320"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706272.1"
/db_xref="GeneID:1027649"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLITAERQRLKEPERENRELRRSNNILRLASAYFAKAEF
DRLWKK"
misc_feature complement(332505..332792)
/locus_tag="SF0320"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 332946..334061
/gene="adrA"
/locus_tag="SF0321"
/db_xref="GeneID:1027652"
CDS 332946..334061
/gene="adrA"
/locus_tag="SF0321"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase AdrA"
/protein_id="NP_706273.1"
/db_xref="GeneID:1027652"
/translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL
KTDAVLAGMWVGVMGVNVLPSTAMLMILCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL
TGITVSFNSAPLEWWLSLPIIVVYPLMFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV
YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ
ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVREGLNTLRLPNTPQVTLRISVG
VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
misc_feature 332961..334058
/gene="adrA"
/locus_tag="SF0321"
/note="diguanylate cyclase AdrA; Provisional; Region:
adrA; PRK10245"
/db_xref="CDD:182329"
gene complement(334078..334887)
/gene="proC"
/locus_tag="SF0322"
/db_xref="GeneID:1027435"
CDS complement(334078..334887)
/gene="proC"
/locus_tag="SF0322"
/note="Code: E; COG: COG0345"
/codon_start=1
/transl_table=11
/product="pyrroline-5-carboxylate reductase"
/protein_id="NP_706274.1"
/db_xref="GeneID:1027435"
/translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA
LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL
DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
misc_feature complement(334081..334887)
/gene="proC"
/locus_tag="SF0322"
/note="pyrroline-5-carboxylate reductase; Reviewed;
Region: PRK11880"
/db_xref="CDD:237008"
gene 335007..335465
/gene="yaiI"
/locus_tag="SF0323"
/db_xref="GeneID:1025739"
CDS 335007..335465
/gene="yaiI"
/locus_tag="SF0323"
/note="Code: S; COG: COG1671"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706275.4"
/db_xref="GeneID:1025739"
/translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNSRGERYTPATI
RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG"
misc_feature 335007..335435
/gene="yaiI"
/locus_tag="SF0323"
/note="Uncharacterized conserved protein YaiI, UPF0178
family [Function unknown]; Region: YaiI; COG1671"
/db_xref="CDD:441277"
gene 335648..336172
/gene="aroL"
/locus_tag="SF0324"
/db_xref="GeneID:1027653"
CDS 335648..336172
/gene="aroL"
/locus_tag="SF0324"
/note="Code: E; COG: COG0703"
/codon_start=1
/transl_table=11
/product="shikimate kinase II"
/protein_id="NP_706276.2"
/db_xref="GeneID:1027653"
/translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
VAEIVEREEWAGFRARETAALEAVTAASTVIATGGGIILTEFNRHFMQNNGIVVYLCA
PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
ISEIRSALAQTINC"
misc_feature 335648..336157
/gene="aroL"
/locus_tag="SF0324"
/note="shikimate kinase AroL; Region: aroL; PRK03731"
/db_xref="CDD:235153"
misc_feature order(335681..335698,335975..335977,336005..336007)
/gene="aroL"
/locus_tag="SF0324"
/note="ADP binding site [chemical binding]; other site"
/db_xref="CDD:238260"
misc_feature order(335693..335695,335741..335743,335747..335749)
/gene="aroL"
/locus_tag="SF0324"
/note="magnesium binding site [ion binding]; other site"
/db_xref="CDD:238260"
misc_feature order(335747..335749,335819..335821,335828..335830,
335879..335887,336062..336064)
/gene="aroL"
/locus_tag="SF0324"
/note="putative shikimate binding site [active]"
/db_xref="CDD:238260"
gene 336222..336413
/gene="yaiA"
/locus_tag="SF0325"
/db_xref="GeneID:1027640"
CDS 336222..336413
/gene="yaiA"
/locus_tag="SF0325"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706277.1"
/db_xref="GeneID:1027640"
/translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
PTAQEAMDAKKRYEDPDKE"
misc_feature 336222..336410
/gene="yaiA"
/locus_tag="SF0325"
/note="hypothetical protein; Provisional; Region:
PRK10380"
/db_xref="CDD:182421"
gene 336671..337348
/gene="aroM"
/locus_tag="SF0326"
/db_xref="GeneID:1027658"
CDS 336671..337348
/gene="aroM"
/locus_tag="SF0326"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706278.1"
/db_xref="GeneID:1027658"
/translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
LAAELLV"
misc_feature 336671..337342
/gene="aroM"
/locus_tag="SF0326"
/note="hypothetical protein; Provisional; Region:
PRK10481"
/db_xref="CDD:182491"
gene 337420..337704
/gene="yaiE"
/locus_tag="SF0327"
/db_xref="GeneID:1027641"
CDS 337420..337704
/gene="yaiE"
/locus_tag="SF0327"
/note="Code: S; COG: COG3123"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706279.1"
/db_xref="GeneID:1027641"
/translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
misc_feature 337420..337701
/gene="yaiE"
/locus_tag="SF0327"
/note="pyrimidine/purine nucleoside phosphorylase; Region:
PRK10579"
/db_xref="CDD:182565"
gene 337913..338194
/locus_tag="SF0328"
/db_xref="GeneID:1027646"
CDS 337913..338194
/locus_tag="SF0328"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706280.1"
/db_xref="GeneID:1027646"
/translation="MLQSRNDHLRQTALRNAHTPASLLTTLTEPQDRSLAINNPQLAA
DVKTAWLKEDPSLLLFVEQPDLSQLRDLVKTGATRKIRSEARHRLEEKQ"
misc_feature 337949..338191
/locus_tag="SF0328"
/note="Protein of unknown function (DUF2773); Region:
DUF2773; pfam10971"
/db_xref="CDD:287885"
gene 338191..338646
/locus_tag="SF0329"
/db_xref="GeneID:1027647"
CDS 338191..338646
/locus_tag="SF0329"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706281.1"
/db_xref="GeneID:1027647"
/translation="MTQRPWSKLQREIYDLLTPTINLQIHCTRYPMRSQNGGSTDLPR
YWITLDKNVIWDYPKDFIAGNAGVRNFHGETCWYPYLTDICSISDLLREYIDTPKAEL
LTKQFTSDKWGLVNILRAADRRIGMRRLDQLRRKTHNIAALKIIARRSE"
gene complement(338724..339635)
/gene="rdgC"
/locus_tag="SF0331"
/db_xref="GeneID:1027650"
CDS complement(338724..339635)
/gene="rdgC"
/locus_tag="SF0331"
/note="Code: L; COG: COG2974"
/codon_start=1
/transl_table=11
/product="recombination associated protein"
/protein_id="NP_706282.2"
/db_xref="GeneID:1027650"
/translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
EKDSLKDEVLHSLLPRAFSRFSQTMMWLDTVNGLIMVDCASAKKAEDTLALLRKSLGS
LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
ADFILMTGELAALIQNLIEGLGGEAQR"
misc_feature complement(338727..339632)
/gene="rdgC"
/locus_tag="SF0331"
/note="recombination associated protein; Reviewed; Region:
rdgC; PRK00321"
/db_xref="CDD:234726"
gene 339622..340668
/gene="yajF"
/locus_tag="SF0330"
/db_xref="GeneID:1027674"
CDS 339622..340668
/gene="yajF"
/locus_tag="SF0330"
/note="Code: K; COG: COG1940"
/codon_start=1
/transl_table=11
/product="NagC-like transcriptional regulator"
/protein_id="NP_706283.3"
/db_xref="GeneID:1027674"
/translation="MNHSMIISTALSLNLAGMITNCRRPCIANPVVRLYAIDIEKNKE
STVRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQ
RGTVGMGIPGSISPYTGVVKNVNSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEA
VDGAAAGAQTVFAVIIGTGCGAGVAFNGRTHIGGNGTAGEWGHNPLPWMDEDELRYRE
EVPCYCGKQGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYEL
RLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVSKAKHGD
SSGVRGAAWLWPQE"
misc_feature 339760..340662
/gene="yajF"
/locus_tag="SF0330"
/note="fructokinase; Reviewed; Region: PRK09557"
/db_xref="CDD:236565"
gene 340647..340788
/locus_tag="SF0332"
/pseudo
/db_xref="GeneID:1027635"
misc_feature 340647..340788
/locus_tag="SF0332"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1786594 (81 aa). BLAST with
identity of 97% in 47 aa. This CDS has been truncated. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(340811..341992)
/gene="araJ"
/locus_tag="SF0333"
/db_xref="GeneID:1027643"
CDS complement(340811..341992)
/gene="araJ"
/locus_tag="SF0333"
/note="Code: G; COG: COG2814"
/codon_start=1
/transl_table=11
/product="MFS transport protein AraJ"
/protein_id="NP_706284.2"
/db_xref="GeneID:1027643"
/translation="MKKVILSLALGTFGLGMAEFGIMSVLTELAHNVGISIPAAGHMI
SYYALVVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQECWRYTFL
LIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWF
SYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVL
ALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNL
GSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQEADSPVLAKPL
G"
misc_feature complement(340850..341992)
/gene="araJ"
/locus_tag="SF0333"
/note="MFS transport protein AraJ; Provisional; Region:
PRK10091"
/db_xref="CDD:182234"
gene complement(342118..345261)
/gene="sbcC"
/locus_tag="SF0334"
/db_xref="GeneID:1027651"
CDS complement(342118..345261)
/gene="sbcC"
/locus_tag="SF0334"
/note="Code: L; COG: COG0419"
/codon_start=1
/transl_table=11
/product="exonuclease SbcC"
/protein_id="NP_706285.1"
/db_xref="GeneID:1027651"
/translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQV
QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA
QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA
AKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
EQKLNALAAITLTLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
NVTLEQTQRNVALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHERQLRLLSQRHELQGQ
IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
ELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT
LVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
TRLHVRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH
KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK
KINGLGYSKLESTFAVK"
misc_feature complement(342121..345261)
/gene="sbcC"
/locus_tag="SF0334"
/note="exonuclease subunit SbcC; Provisional; Region:
PRK10246"
/db_xref="CDD:182330"
gene complement(345258..346460)
/gene="sbcD"
/locus_tag="SF0335"
/db_xref="GeneID:1025983"
CDS complement(345258..346460)
/gene="sbcD"
/locus_tag="SF0335"
/note="Code: L; COG: COG0420"
/codon_start=1
/transl_table=11
/product="exonuclease SbcD"
/protein_id="NP_706286.1"
/db_xref="GeneID:1025983"
/translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIISSQAGLNGIEKQQHLLAAITDY
YQQHYADACKLRGDQPLPIIATGHLTTVGSSKSDAVRDIYIGTLDAFPAQNFPPADYI
ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE
VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEDLDESQQQRLQHLFTTTLR
TLAGEHEA"
misc_feature complement(345261..346460)
/gene="sbcD"
/locus_tag="SF0335"
/note="exonuclease subunit SbcD; Provisional; Region:
PRK10966"
/db_xref="CDD:182871"
gene 346650..347339
/gene="phoB"
/locus_tag="SF0336"
/db_xref="GeneID:1027627"
CDS 346650..347339
/gene="phoB"
/locus_tag="SF0336"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="transcriptional regulator PhoB"
/protein_id="NP_706287.1"
/db_xref="GeneID:1027627"
/translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE
PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
ITKPFSPKELVARIKAVMRRISPMAVEEVIKMQGLSLNPTSHRVMAGEEPLEMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
RGTGYRFSTRF"
misc_feature 346650..347336
/gene="phoB"
/locus_tag="SF0336"
/note="phosphate response regulator transcription factor
PhoB; Region: PRK10161"
/db_xref="CDD:182277"
gene 347397..348692
/gene="phoR"
/locus_tag="SF0337"
/db_xref="GeneID:1025985"
CDS 347397..348692
/gene="phoR"
/locus_tag="SF0337"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="phosphate regulon sensor protein"
/protein_id="NP_706288.1"
/db_xref="GeneID:1025985"
/translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTQLLNE
KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
misc_feature 347397..348686
/gene="phoR"
/locus_tag="SF0337"
/note="phosphate regulon sensor histidine kinase PhoR;
Region: phoR; PRK11006"
/db_xref="CDD:182895"
gene 349099..350418
/gene="brnQ"
/locus_tag="SF0338"
/db_xref="GeneID:1027530"
CDS 349099..350418
/gene="brnQ"
/locus_tag="SF0338"
/note="Code: E; COG: COG1114"
/codon_start=1
/transl_table=11
/product="branched-chain amino acid ABC transporter"
/protein_id="NP_706289.1"
/db_xref="GeneID:1027530"
/translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
ILSVVAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
TEARLLTRYTVWAGLMAGVGLTLLYLALFCLGSDSASLVDQSANGAAILHAYVQHTFG
GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS
QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH"
misc_feature 349099..350415
/gene="brnQ"
/locus_tag="SF0338"
/note="branched-chain amino acid transporter carrier
protein BrnQ; Region: PRK15433"
/db_xref="CDD:185331"
gene 350494..351867
/gene="proY"
/locus_tag="SF0339"
/db_xref="GeneID:1027638"
CDS 350494..351867
/gene="proY"
/locus_tag="SF0339"
/note="Code: E; COG: COG1113"
/codon_start=1
/transl_table=11
/product="permease"
/protein_id="NP_706290.2"
/db_xref="GeneID:1027638"
/translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
AIADVTAFGIYMGVLFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
RQLAENQ"
misc_feature 350494..351858
/gene="proY"
/locus_tag="SF0339"
/note="putative proline-specific permease; Provisional;
Region: proY; PRK10580"
/db_xref="CDD:182566"
gene 352022..353839
/gene="malZ"
/locus_tag="SF0340"
/db_xref="GeneID:1027633"
CDS 352022..353839
/gene="malZ"
/locus_tag="SF0340"
/note="Code: G; COG: COG0366"
/codon_start=1
/transl_table=11
/product="maltodextrin glucosidase"
/protein_id="NP_706291.1"
/db_xref="GeneID:1027633"
/translation="MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDN
EEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMP
PARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR
DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYR
HVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNLGTGGACHNSES
PWRDWYSFSDDGTALDWLGYASLTKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGW
RLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAM
NYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDT
ARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQD
TALFALYRRMIVLRKKSQALRRGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEASEV
VLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN"
misc_feature 352022..353812
/gene="malZ"
/locus_tag="SF0340"
/note="maltodextrin glucosidase; Provisional; Region:
PRK10785"
/db_xref="CDD:236759"
gene complement(353844..354417)
/locus_tag="SF0341"
/pseudogene="unknown"
/db_xref="GeneID:1027645"
gene 354510..355580
/gene="queA"
/locus_tag="SF0342"
/db_xref="GeneID:1027666"
CDS 354510..355580
/gene="queA"
/locus_tag="SF0342"
/note="Code: J; COG: COG0809"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine:tRNA
ribosyltransferase-isomerase"
/protein_id="NP_706293.1"
/db_xref="GeneID:1027666"
/translation="MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
PGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDA
DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
FSYGDAMFITYNPQAINERVGE"
misc_feature 354510..355541
/gene="queA"
/locus_tag="SF0342"
/note="S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; Provisional; Region: queA;
PRK00147"
/db_xref="CDD:234666"
gene 355635..356762
/gene="tgt"
/locus_tag="SF0343"
/db_xref="GeneID:1027667"
CDS 355635..356762
/gene="tgt"
/locus_tag="SF0343"
/note="Code: J; COG: COG0343"
/codon_start=1
/transl_table=11
/product="queuine tRNA-ribosyltransferase"
/protein_id="NP_706294.1"
/db_xref="GeneID:1027667"
/translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
MSLRWAKRSRERFDSLGNKNALFGIIQGSIYEDLRDISVKGLVDIGFDGYAVGGLAVG
EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
misc_feature 355635..356738
/gene="tgt"
/locus_tag="SF0343"
/note="Queuine/archaeosine tRNA-ribosyltransferase
[Translation, ribosomal structure and biogenesis]; Region:
Tgt; COG0343"
/db_xref="CDD:440112"
gene 356785..357117
/gene="yajC"
/locus_tag="SF0344"
/db_xref="GeneID:1027685"
CDS 356785..357117
/gene="yajC"
/locus_tag="SF0344"
/note="Code: N; COG: COG1862"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit YajC"
/protein_id="NP_706295.1"
/db_xref="GeneID:1027685"
/translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
PKGTMKAL"
misc_feature 356791..357114
/gene="yajC"
/locus_tag="SF0344"
/note="preprotein translocase subunit YajC; Validated;
Region: yajC; PRK05585"
/db_xref="CDD:235518"
gene 357145..358992
/gene="secD"
/locus_tag="SF0345"
/db_xref="GeneID:1027665"
CDS 357145..358992
/gene="secD"
/locus_tag="SF0345"
/note="Code: N; COG: COG0342"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecD"
/protein_id="NP_706296.1"
/db_xref="GeneID:1027665"
/translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
misc_feature 357148..357453
/gene="secD"
/locus_tag="SF0345"
/note="SecD export protein N-terminal TM region; Region:
SecD-TM1; pfam13721"
/db_xref="CDD:463968"
misc_feature 357166..358989
/gene="secD"
/locus_tag="SF0345"
/note="preprotein translocase subunit SecD; Reviewed;
Region: secD; PRK05812"
/db_xref="CDD:235615"
gene 359003..359974
/gene="secF"
/locus_tag="SF0346"
/db_xref="GeneID:1027644"
CDS 359003..359974
/gene="secF"
/locus_tag="SF0346"
/note="Code: N; COG: COG0341"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecF"
/protein_id="NP_706297.2"
/db_xref="GeneID:1027644"
/translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY
VGFRFEWRLAAGVVIALTHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
misc_feature 359027..359908
/gene="secF"
/locus_tag="SF0346"
/note="Preprotein translocase subunit SecF [Intracellular
trafficking, secretion, and vesicular transport]; Region:
SecF; COG0341"
/db_xref="CDD:440110"
gene 360103..360450
/gene="yajD"
/locus_tag="SF0347"
/db_xref="GeneID:1027670"
CDS 360103..360450
/gene="yajD"
/locus_tag="SF0347"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706298.1"
/db_xref="GeneID:1027670"
/translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
PFADLKAMMNKKK"
misc_feature 360103..360441
/gene="yajD"
/locus_tag="SF0347"
/note="HNH nuclease family protein; Region: PRK11295"
/db_xref="CDD:236895"
misc_feature order(360229..360231,360235..360243,360247..360249,
360280..360285,360295..360300,360307..360309,
360319..360321)
/gene="yajD"
/locus_tag="SF0347"
/note="active site"
/db_xref="CDD:238038"
gene complement(360627..361511)
/gene="tsx"
/locus_tag="SF0348"
/db_xref="GeneID:1027664"
CDS complement(360627..361511)
/gene="tsx"
/locus_tag="SF0348"
/note="Code: M; COG: COG3248"
/codon_start=1
/transl_table=11
/product="nucleoside-specific channel-forming protein Tsx"
/protein_id="NP_706299.2"
/db_xref="GeneID:1027664"
/translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
EPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMS
LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN
FNVRSTGWGGYLVVGYNF"
misc_feature complement(360630..361511)
/gene="tsx"
/locus_tag="SF0348"
/note="nucleoside-specific channel-forming protein Tsx;
Provisional; Region: PRK15106"
/db_xref="CDD:237911"
gene complement(361809..362408)
/gene="yajI"
/locus_tag="SF0349"
/db_xref="GeneID:1027637"
CDS complement(361809..362408)
/gene="yajI"
/locus_tag="SF0349"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706300.3"
/db_xref="GeneID:1027637"
/translation="MLSLLLPSTIRLIATRKGRPMNTNVFRLLLLGSLFSLSACVQQS
EVRQMKHSVSTLNQEMTQLNQETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGT
LRMSLVNITPDTDGTTLTLRIQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLI
NAPASVLAPSDVDIPLQLKGISVDQLGFVRIHDIQPVMQ"
misc_feature complement(361812..362348)
/gene="yajI"
/locus_tag="SF0349"
/note="hypothetical protein; Provisional; Region:
PRK11530"
/db_xref="CDD:236923"
gene 362499..362948
/gene="nrdR"
/locus_tag="SF0350"
/db_xref="GeneID:1027679"
CDS 362499..362948
/gene="nrdR"
/locus_tag="SF0350"
/note="Code: K; COG: COG1327"
/codon_start=1
/transl_table=11
/product="transcriptional regulator NrdR"
/protein_id="NP_706301.1"
/db_xref="GeneID:1027679"
/translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDYVEMAINHIKSQLRATGERE
VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
misc_feature 362499..362945
/gene="nrdR"
/locus_tag="SF0350"
/note="Transcriptional regulator NrdR, contains Zn-ribbon
and ATP-cone domains [Transcription]; Region: NrdR;
COG1327"
/db_xref="CDD:440938"
gene 362952..364055
/gene="ribD"
/locus_tag="SF0351"
/db_xref="GeneID:1027648"
CDS 362952..364055
/gene="ribD"
/locus_tag="SF0351"
/note="Code: H; COG: COG1985"
/codon_start=1
/transl_table=11
/product="bifunctional
diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase"
/protein_id="NP_706302.1"
/db_xref="GeneID:1027648"
/translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQD
PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
TAMASGESQWITSPQARRDVQRQRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL
YPQQNLRQPVRIVIDSQNRVTPEHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHK
GHLDLVVLMMQLGKQQINSIWVEAGPTLAGVLLQAGLVDELIVYIAPKLLGSDARGLC
SLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
misc_feature 362952..364052
/gene="ribD"
/locus_tag="SF0351"
/note="bifunctional
diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase RibD; Region: ribD; PRK10786"
/db_xref="CDD:182729"
gene 364144..364614
/gene="ribH"
/locus_tag="SF0352"
/db_xref="GeneID:1027531"
CDS 364144..364614
/gene="ribH"
/locus_tag="SF0352"
/note="Code: H; COG: COG0054"
/codon_start=1
/transl_table=11
/product="6,7-dimethyl-8-ribityllumazine synthase"
/protein_id="NP_706303.2"
/db_xref="GeneID:1027531"
/translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
misc_feature 364150..364608
/gene="ribH"
/locus_tag="SF0352"
/note="6,7-dimethyl-8-ribityllumazine synthase (Riboflavin
synthase beta chain) [Coenzyme transport and metabolism];
Region: RibE; COG0054"
/db_xref="CDD:439824"
gene 364634..365053
/gene="nusB"
/locus_tag="SF0353"
/db_xref="GeneID:1027676"
CDS 364634..365053
/gene="nusB"
/locus_tag="SF0353"
/note="Code: K; COG: COG0781"
/codon_start=1
/transl_table=11
/product="transcription antitermination protein NusB"
/protein_id="NP_706304.1"
/db_xref="GeneID:1027676"
/translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
misc_feature 364664..365050
/gene="nusB"
/locus_tag="SF0353"
/note="transcription antitermination factor NusB; Region:
nusB; PRK00202"
/db_xref="CDD:234686"
gene 365131..366108
/gene="thiL"
/locus_tag="SF0354"
/db_xref="GeneID:1027673"
CDS 365131..366108
/gene="thiL"
/locus_tag="SF0354"
/note="Code: H; COG: COG0611"
/codon_start=1
/transl_table=11
/product="thiamine monophosphate kinase"
/protein_id="NP_706305.1"
/db_xref="GeneID:1027673"
/translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
SDLGHIVKASDCGARIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR
GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTFDWKGYDHFVTP"
misc_feature 365131..366096
/gene="thiL"
/locus_tag="SF0354"
/note="thiamine monophosphate kinase; Provisional; Region:
PRK05731"
/db_xref="CDD:235583"
gene 366086..366604
/gene="pgpA"
/locus_tag="SF0355"
/db_xref="GeneID:1027681"
CDS 366086..366604
/gene="pgpA"
/locus_tag="SF0355"
/note="Code: I; COG: COG1267"
/codon_start=1
/transl_table=11
/product="phosphatidylglycerophosphatase A"
/protein_id="NP_706306.2"
/db_xref="GeneID:1027681"
/translation="MTILSRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGSMGSLA
AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
FIGHHWPLGILS"
misc_feature 366107..366598
/gene="pgpA"
/locus_tag="SF0355"
/note="phosphatidylglycerophosphatase A; Provisional;
Region: PRK11068"
/db_xref="CDD:182942"
misc_feature order(366155..366157,366221..366223,366272..366274,
366281..366286,366293..366298,366344..366346,
366353..366361,366368..366373,366377..366382,
366389..366391,366422..366430,366434..366442,
366446..366451,366455..366460,366569..366571)
/gene="pgpA"
/locus_tag="SF0355"
/note="tetramer interfaces [polypeptide binding]; other
site"
/db_xref="CDD:133477"
misc_feature order(366353..366355,366362..366367,366515..366517,
366524..366529)
/gene="pgpA"
/locus_tag="SF0355"
/note="binuclear metal-binding site [ion binding]; other
site"
/db_xref="CDD:133477"
gene complement(366715..367632)
/locus_tag="SF0356"
/db_xref="GeneID:1027663"
CDS complement(366715..367632)
/locus_tag="SF0356"
/note="Code: C; COG: COG0667"
/codon_start=1
/transl_table=11
/product="reductase"
/protein_id="NP_706307.1"
/db_xref="GeneID:1027663"
/translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII
KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
AQILRSINDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
ASQFAQALELQKQHCWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR
LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
PGIAAPIIGTSREEQLDELLNAVDITLKP"
misc_feature complement(366718..367629)
/locus_tag="SF0356"
/note="Escherichia coli YajO and similar proteins; Region:
AKR_EcYajO-like; cd19079"
/db_xref="CDD:381305"
misc_feature complement(order(366748..366753,366760..366762,
366769..366786,366835..366837,366982..367002,
367084..367086,367159..367164,367249..367254,
367369..367371,367450..367452,367465..367467,
367570..367578))
/locus_tag="SF0356"
/note="putative active site [active]"
/db_xref="CDD:381305"
misc_feature complement(order(367252..367254,367369..367371,
367450..367452,367465..367467))
/locus_tag="SF0356"
/note="catalytic tetrad [active]"
/db_xref="CDD:381305"
gene complement(367687..369549)
/gene="dxs"
/locus_tag="SF0357"
/db_xref="GeneID:1027687"
CDS complement(367687..369549)
/gene="dxs"
/locus_tag="SF0357"
/note="Code: HI; COG: COG1154"
/codon_start=1
/transl_table=11
/product="1-deoxy-D-xylulose-5-phosphate synthase"
/protein_id="NP_706308.1"
/db_xref="GeneID:1027687"
/translation="MSFDIAKYPTLALVDSTQELRLLPNESLPKLCDELRRYLLDSVS
RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
FEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLVI
LNFGTLMPETAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG
SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
misc_feature complement(367690..369531)
/gene="dxs"
/locus_tag="SF0357"
/note="Deoxyxylulose-5-phosphate synthase [Coenzyme
transport and metabolism, Lipid transport and metabolism];
Region: Dxs; COG1154"
/db_xref="CDD:440768"
gene complement(369574..370473)
/gene="ispA"
/locus_tag="SF0358"
/db_xref="GeneID:1027686"
CDS complement(369574..370473)
/gene="ispA"
/locus_tag="SF0358"
/note="Code: H; COG: COG0142"
/codon_start=1
/transl_table=11
/product="geranyltranstransferase"
/protein_id="NP_706309.1"
/db_xref="GeneID:1027686"
/translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
VKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQAL
DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQALKQ
LAEQSLDTSALEALADYIIQRNK"
misc_feature complement(369577..370473)
/gene="ispA"
/locus_tag="SF0358"
/note="(2E,6E)-farnesyl diphosphate synthase; Region:
PRK10581"
/db_xref="CDD:182567"
misc_feature complement(order(369733..369735,369748..369750,
369763..369765,369793..369795,369802..369807,
369919..369921,369928..369933,369991..369993,
370000..370002,370186..370191,370225..370227,
370231..370239,370246..370248))
/gene="ispA"
/locus_tag="SF0358"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:173833"
misc_feature complement(order(369727..369741,369748..369765,
369781..369786,370156..370194,370222..370224))
/gene="ispA"
/locus_tag="SF0358"
/note="active site lid residues [active]"
/db_xref="CDD:173833"
misc_feature complement(order(369733..369735,369748..369750,
369763..369765,369793..369795,369802..369807))
/gene="ispA"
/locus_tag="SF0358"
/note="aspartate-rich region 2; other site"
/db_xref="CDD:173833"
gene complement(370473..370715)
/gene="xseB"
/locus_tag="SF0359"
/db_xref="GeneID:1027660"
CDS complement(370473..370715)
/gene="xseB"
/locus_tag="SF0359"
/note="Code: L; COG: COG1722"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease VII small subunit"
/protein_id="NP_706310.1"
/db_xref="GeneID:1027660"
/translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
misc_feature complement(370482..370715)
/gene="xseB"
/locus_tag="SF0359"
/note="exodeoxyribonuclease VII small subunit;
Provisional; Region: PRK00977"
/db_xref="CDD:179195"
gene 370921..372370
/locus_tag="SF0360"
/pseudogene="unknown"
/db_xref="GeneID:1027662"
gene complement(372424..373020)
/gene="thiJ"
/locus_tag="SF0361"
/db_xref="GeneID:1027683"
CDS complement(372424..373020)
/gene="thiJ"
/locus_tag="SF0361"
/note="Code: R; COG: COG0693"
/codon_start=1
/transl_table=11
/product="oxidative-stress-resistance chaperone"
/protein_id="NP_706312.1"
/db_xref="GeneID:1027683"
/translation="MNMSASALVCLAPGSEETEAVTTINLLVRGGIKVTTASVDSDGN
LAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGTECFRDSTLLVETVKQFHRSGR
IVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGP
GTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE"
misc_feature complement(372427..373014)
/gene="thiJ"
/locus_tag="SF0361"
/note="protein deglycase YajL; Region: PRK11574"
/db_xref="CDD:183210"
misc_feature complement(372697..372699)
/gene="thiJ"
/locus_tag="SF0361"
/note="conserved cys residue [active]"
/db_xref="CDD:153229"
gene complement(372977..373888)
/gene="apbA"
/locus_tag="SF0362"
/db_xref="GeneID:1027702"
CDS complement(372977..373888)
/gene="apbA"
/locus_tag="SF0362"
/note="Code: H; COG: COG1893"
/codon_start=1
/transl_table=11
/product="2-dehydropantoate 2-reductase"
/protein_id="NP_706313.1"
/db_xref="GeneID:1027702"
/translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVET
DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT
IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
ENTRLFEMVKRKESEYERIGTGLPRPW"
misc_feature complement(373004..373888)
/gene="apbA"
/locus_tag="SF0362"
/note="2-dehydropantoate 2-reductase; Reviewed; Region:
PRK06522"
/db_xref="CDD:235821"
gene 374056..374547
/gene="yajQ"
/locus_tag="SF0363"
/db_xref="GeneID:1027675"
CDS 374056..374547
/gene="yajQ"
/locus_tag="SF0363"
/note="Code: S; COG: COG1666"
/codon_start=1
/transl_table=11
/product="nucleotide-binding protein"
/protein_id="NP_706314.2"
/db_xref="GeneID:1027675"
/translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEYSFELNDA
SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
FRD"
misc_feature 374056..374544
/gene="yajQ"
/locus_tag="SF0363"
/note="putative nucleotide-binding protein; Reviewed;
Region: PRK05412"
/db_xref="CDD:180061"
gene complement(374607..376337)
/locus_tag="SF0364"
/db_xref="GeneID:1027671"
CDS complement(374607..376337)
/locus_tag="SF0364"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706315.1"
/db_xref="GeneID:1027671"
/translation="MKAKSTLLLMILSVFYSHQVLSSEPTQPDVYSVVEKKLNSALPL
EENTTFRSQAEWFNLQYELLVSGYPERAYNLLSKLETESKNAKYYLDLTASRVAEEEA
PETALTFLSKIGLNKPATLTSFESYINSWIKSKQPEKAMQLLSLDENALNYYLPTVLV
AYQIVPDKAISIYNSVYGDNVVIPYQQVTMLLTVAEGYQTKGDIKNAIHYADKALNMF
DKAIAVDSSRESHYSDEYLKLMNIYAANGNKEKAVVLSQRLHKAITESQSNYLSTLEG
ILLFYRNNDMQQDYQNSLSNYIVFIDKIFAFSPSTRSELSLINLLNSLNEVELMRKRL
AFLMTAPEYACYNSQYCYEDKVSALKILYRHHDNELMDKYFTTLLKEISNQPLEDWDI
IISNTGEKFSEVGLTKYAQHLASFAEEFYIKEQKSHSESEMRGLFSSLAELYSFGNDT
ASANRVFHQHVPAFNTDHMIQYFINAKEWNNARELLIKEEMLGMHNLILLENICMQKN
AECMAHITFTLNKLTTQPAITKIDSVGNEQLYQIGKIYHKLEIKPEPEQQVLIQSLYD
RASGSASATQ"
misc_feature complement(375444..376172)
/locus_tag="SF0364"
/note="Lipopolysaccharide biosynthesis regulator
YciM/LapB, contains six TPR domains and a C-terminal
metal-binding domain [Cell wall/membrane/envelope
biogenesis]; Region: LapB; COG2956"
/db_xref="CDD:442196"
gene complement(376390..378543)
/locus_tag="SF0365"
/db_xref="GeneID:1027661"
CDS complement(376390..378543)
/locus_tag="SF0365"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706316.2"
/db_xref="GeneID:1027661"
/translation="MYKSLFTIIILLYSASSYAKSESPPASTITFIAQIDHVELNKTA
LSHDMKLVLADRFYFKTSNPCETNSISARPESMDITDKAYADKLKKLETPFLDDRYFF
MTINQCDGNGTPMLTDIKVCTTELCGAEYTKKMSTVWLDETLKPTAKRLAIYFIQSPL
PYDEEKKQWKVTGWYISSTDNQSSTKQIAFEGYTDTDNLSDSKFISSFKSWFESGKIK
NIANYNPKGERDGKYESYYNSNGNVYESLSFSNGLINGEFITYYENGAIESKRHFNND
KIKDGECPHFYEDGKIKQQHSYLNSKLDGPAYEYYPDGKLMQENFYQQSVLIGNDTSY
YQSGKISSIHNRNSRGQYDGANERYSEEGKLLSKSVYKDGKQISVQTWYENGQKEEEK
HFDEQGQLNGLVKQWYKNGNLAKSQNYKHDILDGNSEEWYENGIPESLYPYKNGKTDG
IAKSWNKYGKLTYSIEYKNGVENGAYRNWSKNTGKLTKETLYVNGIRQGVEKEFNDRT
GKLLTSTQYVNNKRHGTEETYDQNGIKYITCYQNDQKLSSLDNPTQIKDNATTGDSSA
QFALGKYEFICANIDEGIKWLTKSAEQKNTDAIYFLATAYKGNGIPANNEKYLAYLQQ
AATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDG
VERNMEKARFHLSNAAEGGIEPALKALNELEHQTK"
misc_feature complement(377560..378036)
/locus_tag="SF0365"
/note="Antitoxin component YwqK of the YwqJK
toxin-antitoxin module [Defense mechanisms]; Region: YwqK;
COG2849"
/db_xref="CDD:442097"
misc_feature complement(377053..377544)
/locus_tag="SF0365"
/note="Antitoxin component YwqK of the YwqJK
toxin-antitoxin module [Defense mechanisms]; Region: YwqK;
COG2849"
/db_xref="CDD:442097"
misc_feature complement(376408..>376869)
/locus_tag="SF0365"
/note="TPR repeat [General function prediction only];
Region: TPR; COG0790"
/db_xref="CDD:440553"
misc_feature complement(376723..376809)
/locus_tag="SF0365"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
misc_feature complement(376615..376704)
/locus_tag="SF0365"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
misc_feature complement(376507..376596)
/locus_tag="SF0365"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
mobile_element 378639..379406
/mobile_element_type="insertion sequence:IS1"
gene 378888..379391
/gene="insB"
/locus_tag="SF0366"
/db_xref="GeneID:1027672"
CDS 378888..379391
/gene="insB"
/locus_tag="SF0366"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706317.1"
/db_xref="GeneID:1027672"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 378996..379388
/gene="insB"
/locus_tag="SF0366"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(379402..379988)
/locus_tag="SF0367"
/pseudogene="unknown"
/db_xref="GeneID:1027668"
gene complement(379972..380283)
/locus_tag="SF0368"
/db_xref="GeneID:1027654"
CDS complement(379972..380283)
/locus_tag="SF0368"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706319.2"
/db_xref="GeneID:1027654"
/translation="MPGKTAALYDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLS
AFILSAAMERAESVLDNQRRRELSNQSWELMNQLIAEPAQPTLALKALMKRKNSDGRQ
A"
misc_feature complement(379996..380244)
/locus_tag="SF0368"
/note="Uncharacterized conserved protein, DUF1778 family
[Function unknown]; Region: COG4453"
/db_xref="CDD:443551"
gene complement(380467..381354)
/gene="cyoE"
/locus_tag="SF0369"
/db_xref="GeneID:1025986"
CDS complement(380467..381354)
/gene="cyoE"
/locus_tag="SF0369"
/note="Code: H; COG: COG0109"
/codon_start=1
/transl_table=11
/product="protoheme IX farnesyltransferase"
/protein_id="NP_706320.2"
/db_xref="GeneID:1025986"
/translation="MFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVG
VSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWF
GANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPSVIGYCAVTGEFDSG
AAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVA
TLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSV
MMSVDFMVPDSHTLLAAVW"
misc_feature complement(380500..381354)
/gene="cyoE"
/locus_tag="SF0369"
/note="protoheme IX farnesyltransferase; Provisional;
Region: PRK04375"
/db_xref="CDD:235293"
gene complement(381369..381698)
/gene="cyoD"
/locus_tag="SF0370"
/db_xref="GeneID:1027659"
CDS complement(381369..381698)
/gene="cyoD"
/locus_tag="SF0370"
/note="Code: C; COG: COG3125"
/codon_start=1
/transl_table=11
/product="cytochrome o ubiquinol oxidase subunit IV"
/protein_id="NP_706321.1"
/db_xref="GeneID:1027659"
/translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL
NYNMMMH"
misc_feature complement(381372..381698)
/gene="cyoD"
/locus_tag="SF0370"
/note="cytochrome o ubiquinol oxidase subunit IV;
Provisional; Region: PRK10582"
/db_xref="CDD:182568"
gene complement(381698..382312)
/gene="cyoC"
/locus_tag="SF0371"
/db_xref="GeneID:1027694"
CDS complement(381698..382312)
/gene="cyoC"
/locus_tag="SF0371"
/note="Code: C; COG: COG1845"
/codon_start=1
/transl_table=11
/product="cytochrome o ubiquinol oxidase subunit III"
/protein_id="NP_706322.1"
/db_xref="GeneID:1027694"
/translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
ALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
misc_feature complement(381701..382312)
/gene="cyoC"
/locus_tag="SF0371"
/note="cytochrome o ubiquinol oxidase subunit III;
Provisional; Region: PRK10663"
/db_xref="CDD:182628"
misc_feature complement(order(382175..382177,382184..382189,
382196..382201,382220..382222,382229..382231,
382241..382246))
/gene="cyoC"
/locus_tag="SF0371"
/note="Subunit I/III interface [polypeptide binding];
other site"
/db_xref="CDD:239214"
misc_feature complement(order(381758..381760,381779..381781,
382064..382069,382079..382081,382088..382090,
382199..382201,382223..382225))
/gene="cyoC"
/locus_tag="SF0371"
/note="Subunit III/IV interface [polypeptide binding];
other site"
/db_xref="CDD:239214"
gene complement(382302..384293)
/gene="cyoB"
/locus_tag="SF0372"
/pseudo
/db_xref="GeneID:1027699"
misc_feature complement(382302..384293)
/gene="cyoB"
/locus_tag="SF0372"
/note="Similar to Escherichia coli K12 cytochrome o
ubiquinol oxidase subunit I gi: 1786634 (664 aa). BLAST
with identity of 99% in 663 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene complement(384315..384812)
/gene="cyoA"
/locus_tag="SF0373"
/pseudo
/db_xref="GeneID:1027708"
misc_feature complement(384315..384812)
/gene="cyoA"
/locus_tag="SF0373"
/note="Similar to Escherichia coli K12 cytochrome o
ubiquinol oxidase subunit II gi: 1786635 (316 aa). BLAST
with identity of 98% in 165 aa. This CDS has been
truncated. The sequence has been checked and is believed
to be correct."
/pseudo
mobile_element 384813..385660
/note="partial"
/mobile_element_type="insertion sequence:ISSfl4"
mobile_element 385653..386881
/note="partial"
/mobile_element_type="insertion sequence:ISSfl4"
gene complement(385781..386128)
/locus_tag="SF0375"
/db_xref="GeneID:1027704"
CDS complement(385781..386128)
/locus_tag="SF0375"
/note="Code: L; COG: COG3436"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 ORF2"
/protein_id="NP_706324.1"
/db_xref="GeneID:1027704"
/translation="MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIF
VFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAW
QHPKRTERPGIRI"
misc_feature complement(385832..386101)
/locus_tag="SF0375"
/note="IS66 family insertion sequence element accessory
protein TnpB; Region: IS66_TnpB; NF033819"
/db_xref="CDD:411392"
gene complement(386125..386799)
/locus_tag="SF0376"
/db_xref="GeneID:1027669"
CDS complement(386125..386799)
/locus_tag="SF0376"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 transposase"
/protein_id="NP_706325.1"
/db_xref="GeneID:1027669"
/translation="MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTI
HTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSRE
FKVRLAKQALQPGAVVARIAREHDINNNLLFKWKSQYEDGLLSDDDIQECMPVPVALT
DTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPELLRALIRE
MKGGIR"
misc_feature complement(386182..386766)
/locus_tag="SF0376"
/note="IS66-like element accessory protein TnpA; Region:
IS66_access_TnpA; NF038385"
/db_xref="CDD:439678"
gene complement(387169..388644)
/gene="ampG"
/locus_tag="SF0377"
/db_xref="GeneID:1027700"
CDS complement(387169..388644)
/gene="ampG"
/locus_tag="SF0377"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="muropeptide transporter"
/protein_id="NP_706326.1"
/db_xref="GeneID:1027700"
/translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE
PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
misc_feature complement(387175..388644)
/gene="ampG"
/locus_tag="SF0377"
/note="muropeptide MFS transporter AmpG; Region: ampG;
PRK11010"
/db_xref="CDD:182898"
misc_feature complement(order(387538..387540,387547..387552,
387559..387564,387571..387573,387619..387621,
387631..387633,387643..387648,387817..387819,
387829..387831,387916..387918,387925..387933,
387940..387945,387952..387954,388189..388191,
388198..388203,388210..388212,388258..388260,
388267..388275,388279..388284,388459..388461,
388549..388551,388558..388563,388570..388575))
/gene="ampG"
/locus_tag="SF0377"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:341039"
gene complement(388688..389368)
/gene="yajG"
/locus_tag="SF0378"
/db_xref="GeneID:1027705"
CDS complement(388688..389368)
/gene="yajG"
/locus_tag="SF0378"
/note="Code: M; COG: COG3056"
/codon_start=1
/transl_table=11
/product="polymerase/proteinase"
/protein_id="NP_706327.4"
/db_xref="GeneID:1027705"
/translation="MMNLHALPTSPRRWQCYDGGNFYQTRLRVSESPNMFKKILFPLV
ALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDNQIV
TLTASRALRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVRYNIATK
ADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQDTSIH
EFIKQNAR"
misc_feature complement(388691..389266)
/gene="yajG"
/locus_tag="SF0378"
/note="hypothetical protein; Provisional; Region:
PRK11627"
/db_xref="CDD:183242"
gene 389538..389888
/gene="bolA"
/locus_tag="SF0379"
/db_xref="GeneID:1027691"
CDS 389538..389888
/gene="bolA"
/locus_tag="SF0379"
/note="Code: T; COG: COG0271"
/codon_start=1
/transl_table=11
/product="murein genes regulator"
/protein_id="NP_706328.3"
/db_xref="GeneID:1027691"
/translation="MTSQRCRRRYFMMIRERIEEKLRAAFQPVFLEVVDESYRHNVPA
GSESHFKVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDT
VFASPPCRGAGSIA"
misc_feature 389571..389885
/gene="bolA"
/locus_tag="SF0379"
/note="transcriptional regulator BolA; Provisional;
Region: PRK11628"
/db_xref="CDD:183243"
gene 389897..390085
/locus_tag="SF0380"
/db_xref="GeneID:1027709"
CDS 389897..390085
/locus_tag="SF0380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706329.2"
/db_xref="GeneID:1027709"
/translation="MQLSALFQYVAKDFMKNGLRAVLFCLDFALFAQHSDENCPGIVK
KYATARNNRSRLIKVMPL"
gene 390232..391530
/gene="tig"
/locus_tag="SF0381"
/db_xref="GeneID:1027715"
CDS 390232..391530
/gene="tig"
/locus_tag="SF0381"
/note="Code: O; COG: COG0544"
/codon_start=1
/transl_table=11
/product="trigger factor"
/protein_id="NP_706330.1"
/db_xref="GeneID:1027715"
/translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEA
EDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
misc_feature 390232..391494
/gene="tig"
/locus_tag="SF0381"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase
(trigger factor) [Posttranslational modification, protein
turnover, chaperones]; Region: Tig; COG0544"
/db_xref="CDD:440310"
gene 391777..392400
/gene="clpP"
/locus_tag="SF0382"
/db_xref="GeneID:1027696"
CDS 391777..392400
/gene="clpP"
/locus_tag="SF0382"
/note="Code: NO; COG: COG0740"
/codon_start=1
/transl_table=11
/product="ATP-dependent Clp protease proteolytic subunit"
/protein_id="NP_706331.2"
/db_xref="GeneID:1027696"
/translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
misc_feature 391810..392397
/gene="clpP"
/locus_tag="SF0382"
/note="ATP-dependent Clp protease proteolytic subunit;
Reviewed; Region: clpP; PRK00277"
/db_xref="CDD:178955"
misc_feature order(391906..391908,391912..391914,391939..391944,
391951..391956,391963..391965,392008..392010,
392029..392031,392041..392043,392050..392052,
392059..392064,392074..392076,392098..392100,
392164..392166,392170..392172,392188..392199,
392239..392241,392248..392250,392254..392256,
392260..392262,392329..392331,392335..392337)
/gene="clpP"
/locus_tag="SF0382"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:132928"
misc_feature order(392107..392109,392182..392184,392329..392331)
/gene="clpP"
/locus_tag="SF0382"
/note="active site residues [active]"
/db_xref="CDD:132928"
gene 392526..393800
/gene="clpX"
/locus_tag="SF0383"
/db_xref="GeneID:1027698"
CDS 392526..393800
/gene="clpX"
/locus_tag="SF0383"
/note="Code: O; COG: COG1219"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease ATP-binding subunit ClpX"
/protein_id="NP_706332.1"
/db_xref="GeneID:1027698"
/translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
misc_feature 392526..393764
/gene="clpX"
/locus_tag="SF0383"
/note="ATP-dependent protease Clp, ATPase subunit ClpX
[Posttranslational modification, protein turnover,
chaperones]; Region: ClpX; COG1219"
/db_xref="CDD:440832"
gene 393988..396342
/gene="lon"
/locus_tag="SF0384"
/db_xref="GeneID:1027697"
CDS 393988..396342
/gene="lon"
/locus_tag="SF0384"
/note="Code: O; COG: COG0466"
/codon_start=1
/transl_table=11
/product="DNA-binding ATP-dependent protease La"
/protein_id="NP_706333.2"
/db_xref="GeneID:1027697"
/translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
KQMEKSQREYYLNEQMKAIQKELGEMDDVPDENEALKRKIDAAKMPKEAKEKAEAELQ
KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
HIEINGDNLHDYLGVQRFDYGRADNENRVGQVIGLAWTEVGGDLLTIETACVPGKGKL
TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
misc_feature 393988..396339
/gene="lon"
/locus_tag="SF0384"
/note="DNA-binding ATP-dependent protease La; Provisional;
Region: PRK10787"
/db_xref="CDD:182730"
gene 396551..396823
/gene="hupB"
/locus_tag="SF0385"
/db_xref="GeneID:1027721"
CDS 396551..396823
/gene="hupB"
/locus_tag="SF0385"
/note="Code: L; COG: COG0776"
/codon_start=1
/transl_table=11
/product="transcriptional regulator HU subunit beta"
/protein_id="NP_706334.1"
/db_xref="GeneID:1027721"
/translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
misc_feature 396551..396820
/gene="hupB"
/locus_tag="SF0385"
/note="DNA-binding protein HU-beta; Region: PRK10664"
/db_xref="CDD:170612"
misc_feature order(396566..396568,396575..396580,396587..396589,
396614..396625,396629..396637,396641..396649,
396653..396658,396668..396682,396689..396691,
396773..396781,396785..396787,396791..396793,
396803..396808)
/gene="hupB"
/locus_tag="SF0385"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:259853"
misc_feature order(396707..396709,396713..396718,396722..396724,
396728..396739,396752..396757,396761..396763)
/gene="hupB"
/locus_tag="SF0385"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:259853"
gene 397015..398886
/gene="ybaU"
/locus_tag="SF0386"
/db_xref="GeneID:1027695"
CDS 397015..398886
/gene="ybaU"
/locus_tag="SF0386"
/note="Code: O; COG: COG0760"
/codon_start=1
/transl_table=11
/product="periplasmic folding chaperone"
/protein_id="NP_706335.1"
/db_xref="GeneID:1027695"
/translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
EQNKNNFMTPEQFRVSYIKLVAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGASG
INSDIITVDGDRAFVLRVSEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN
VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
misc_feature 397015..398871
/gene="ybaU"
/locus_tag="SF0386"
/note="periplasmic folding chaperone; Provisional; Region:
PRK10788"
/db_xref="CDD:182731"
gene 399037..399408
/gene="ybaV"
/locus_tag="SF0387"
/db_xref="GeneID:1027701"
CDS 399037..399408
/gene="ybaV"
/locus_tag="SF0387"
/note="Code: L; COG: COG1555"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706336.1"
/db_xref="GeneID:1027701"
/translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA
QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED
LKQVPGMGNSLVERNLAVLTL"
misc_feature 399199..399405
/gene="ybaV"
/locus_tag="SF0387"
/note="competence protein ComEA helix-hairpin-helix repeat
region; Region: TIGR00426"
/db_xref="CDD:129520"
gene 399502..399900
/gene="ybaW"
/locus_tag="SF0388"
/db_xref="GeneID:1026002"
CDS 399502..399900
/gene="ybaW"
/locus_tag="SF0388"
/note="Code: R; COG: COG0824"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706337.1"
/db_xref="GeneID:1026002"
/translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGVENSDSFQWM
TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILNQVITLEPEGQVVADA
LITFVCIDLKTQKALALEGELREKLEQMVK"
misc_feature 399514..399861
/gene="ybaW"
/locus_tag="SF0388"
/note="acyl-CoA thioester hydrolase, YbgC/YbaW family;
Region: TIGR00051"
/db_xref="CDD:129161"
misc_feature order(399583..399585,399652..399654,399658..399660,
399739..399750)
/gene="ybaW"
/locus_tag="SF0388"
/note="active site"
/db_xref="CDD:238329"
gene complement(399952..400647)
/gene="ybaX"
/locus_tag="SF0389"
/db_xref="GeneID:1027692"
CDS complement(399952..400647)
/gene="ybaX"
/locus_tag="SF0389"
/note="Code: R; COG: COG0603"
/codon_start=1
/transl_table=11
/product="7-cyano-7-deazaguanine synthase QueC"
/protein_id="NP_706338.1"
/db_xref="GeneID:1027692"
/translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID
VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKP
TVMAAMKQKTGLR"
misc_feature complement(399955..400647)
/gene="ybaX"
/locus_tag="SF0389"
/note="queuosine biosynthesis protein QueC; Provisional;
Region: PRK11106"
/db_xref="CDD:182967"
gene complement(400712..402136)
/locus_tag="SF0390"
/db_xref="GeneID:1025993"
CDS complement(400712..402136)
/locus_tag="SF0390"
/note="Code: EP; COG: COG0747"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706339.3"
/db_xref="GeneID:1025993"
/translation="MLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQP
GFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDRLRWDFYLRSTLHWHN
GDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASY
CSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDL
GTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQS
GLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQ
ATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPH
VFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMADATLTPLFNYHYRISAPPG
VNGVRLTPRGWFEFTEAWLPAPSQ"
misc_feature complement(400718..402133)
/locus_tag="SF0390"
/note="DNA-binding transcriptional regulator SgrR of sgrS
sRNA, contains a MarR-type HTH domain and a
periplasmic-type solute-binding domain [Transcription];
Region: SgrR; COG4533"
/db_xref="CDD:443600"
gene 402492..403322
/gene="cof"
/locus_tag="SF0391"
/db_xref="GeneID:1027688"
CDS 402492..403322
/gene="cof"
/locus_tag="SF0391"
/note="Code: R; COG: COG0561"
/codon_start=1
/transl_table=11
/product="thiamin pyrimidine pyrophosphate hydrolase"
/protein_id="NP_706340.1"
/db_xref="GeneID:1027688"
/translation="MEKEMARLVAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTF
ATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDT
RASMHIFNDDGWFTGKESPALLQVFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLT
RLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVRTQHLGLSLRDCMAFGDAM
NDREMLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
"
misc_feature 402504..403319
/gene="cof"
/locus_tag="SF0391"
/note="HMP-PP phosphatase; Region: PRK15126"
/db_xref="CDD:185080"
gene 403389..403934
/gene="ybaO"
/locus_tag="SF0392"
/db_xref="GeneID:1027680"
CDS 403389..403934
/gene="ybaO"
/locus_tag="SF0392"
/note="Code: K; COG: COG1522"
/codon_start=1
/transl_table=11
/product="LRP-like transcriptional regulator"
/protein_id="NP_706341.2"
/db_xref="GeneID:1027680"
/translation="MVFKPHRINCRDFTFKIELKEKKILRGRAMLDKIDRKLLALLQQ
DCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIGLGLTAFVLIKTQ
HHSSEWYCRFVTVVTEMPEVLGVWRMAGEYDYLMRVQVADMKRYDEFYKRLVNSVPGL
SDVTSSFAMEQIKYTTSLPIE"
misc_feature 403473..403895
/gene="ybaO"
/locus_tag="SF0392"
/note="DNA-binding transcriptional regulator, Lrp family
[Transcription]; Region: Lrp; COG1522"
/db_xref="CDD:441131"
gene 403964..405736
/gene="mdlA"
/locus_tag="SF0393"
/db_xref="GeneID:1027689"
CDS 403964..405736
/gene="mdlA"
/locus_tag="SF0393"
/note="Code: Q; COG: COG1132"
/codon_start=1
/transl_table=11
/product="multidrug transporter membrane
protein\ATP-binding protein"
/protein_id="NP_706342.1"
/db_xref="GeneID:1027689"
/translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD
GVTEQHFTTGLSLMWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSR
QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL
TLFALLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ
LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE
LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD
IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS
VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE
HQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDELAQQSGWYRD
MYRYQQLEAALDDVPEIREEAVDA"
misc_feature 404027..405733
/gene="mdlA"
/locus_tag="SF0393"
/note="SmdA family multidrug ABC transporter
permease/ATP-binding protein; Region: PRK10789"
/db_xref="CDD:182732"
gene 405729..407510
/gene="mdlB"
/locus_tag="SF0394"
/db_xref="GeneID:1027737"
CDS 405729..407510
/gene="mdlB"
/locus_tag="SF0394"
/note="Code: Q; COG: COG1132"
/codon_start=1
/transl_table=11
/product="multidrug transporter membrane
protein\ATP-binding protein"
/protein_id="NP_706343.2"
/db_xref="GeneID:1027737"
/translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL
LISYFIDNMVAKNNLPLKVVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGAVQQLRT
DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM
FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS
GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDY
PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP
LTEGEIHLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL
ETVQLAELARSMSDCIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID
SGTEQAIQHALAAVREHTTLVVIAHRLSTIIDADTILVLHRGQAVEQGTHQQLLAAQG
RYWQMYQLQLAGEELAASVREEESLSA"
misc_feature 405729..407504
/gene="mdlB"
/locus_tag="SF0394"
/note="SmdB family multidrug efflux ABC transporter
permease/ATP-binding protein; Region: PRK10790"
/db_xref="CDD:182733"
gene 407691..408029
/gene="glnK"
/locus_tag="SF0395"
/db_xref="GeneID:1027682"
CDS 407691..408029
/gene="glnK"
/locus_tag="SF0395"
/note="Code: E; COG: COG0347"
/codon_start=1
/transl_table=11
/product="nitrogen regulatory protein P-II 2"
/protein_id="NP_706344.2"
/db_xref="GeneID:1027682"
/translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
RTGEADEAAL"
misc_feature 407691..408026
/gene="glnK"
/locus_tag="SF0395"
/note="P-II family nitrogen regulator; Region: PRK10665"
/db_xref="CDD:182629"
gene 408059..409345
/gene="amtB"
/locus_tag="SF0396"
/db_xref="GeneID:1027703"
CDS 408059..409345
/gene="amtB"
/locus_tag="SF0396"
/note="Code: P; COG: COG0004"
/codon_start=1
/transl_table=11
/product="ammonium transporter"
/protein_id="NP_706345.1"
/db_xref="GeneID:1027703"
/translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
MTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINW
LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL
SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
NLPMVFTGTAILYIGWFGFNAGSVGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC
DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA
FIGYKLADLTVGLRVPEEQEREGLDVNSHGENAYNA"
misc_feature 408059..409342
/gene="amtB"
/locus_tag="SF0396"
/note="ammonium transporter AmtB; Region: PRK10666"
/db_xref="CDD:182630"
gene complement(409394..410254)
/gene="tesB"
/locus_tag="SF0397"
/db_xref="GeneID:1027706"
CDS complement(409394..410254)
/gene="tesB"
/locus_tag="SF0397"
/note="Code: I; COG: COG1946"
/codon_start=1
/transl_table=11
/product="acyl-CoA thioesterase II"
/protein_id="NP_706346.2"
/db_xref="GeneID:1027706"
/translation="MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQAL
YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHCIG
FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
VQEGVMRNHN"
misc_feature complement(409397..410254)
/gene="tesB"
/locus_tag="SF0397"
/note="acyl-CoA thioesterase II; Provisional; Region:
PRK10526"
/db_xref="CDD:182519"
gene 410472..411044
/gene="ybaY"
/locus_tag="SF0398"
/db_xref="GeneID:1026012"
CDS 410472..411044
/gene="ybaY"
/locus_tag="SF0398"
/note="Code: S; COG: COG3126"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706347.1"
/db_xref="GeneID:1026012"
/translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA
IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV
LPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPV
QASGGATTTVPSTSPTQVNPSSAVPAPTQY"
misc_feature 410565..410936
/gene="ybaY"
/locus_tag="SF0398"
/note="Uncharacterized lipoprotein YbaY [Function
unknown]; Region: YbaY; COG3126"
/db_xref="CDD:442360"
mobile_element 411070..412497
/mobile_element_type="insertion sequence:IS4"
gene 411137..412483
/locus_tag="SF0399"
/db_xref="GeneID:1027723"
CDS 411137..412483
/locus_tag="SF0399"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_706348.1"
/db_xref="GeneID:1027723"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMVLERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGAMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature 411227..412225
/locus_tag="SF0399"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene complement(412513..412824)
/gene="ybaZ"
/locus_tag="SF0400"
/db_xref="GeneID:1027693"
CDS complement(412513..412824)
/gene="ybaZ"
/locus_tag="SF0400"
/note="Code: L; COG: COG3695"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706349.2"
/db_xref="GeneID:1027693"
/translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
Y"
misc_feature complement(412516..412821)
/gene="ybaZ"
/locus_tag="SF0400"
/note="Alkylated DNA nucleotide flippase Atl1,
participates in nucleotide excision repair, Ada-like
DNA-binding domain [Transcription]; Region: Atl1; COG3695"
/db_xref="CDD:442910"
misc_feature complement(order(412618..412620,412639..412641,
412654..412656,412678..412680,412684..412689,
412696..412698,412702..412707,412711..412713,
412720..412722,412744..412749,412801..412806))
/gene="ybaZ"
/locus_tag="SF0400"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:119438"
misc_feature complement(order(412573..412575,412645..412647,
412651..412656,412747..412749))
/gene="ybaZ"
/locus_tag="SF0400"
/note="active site"
/db_xref="CDD:119438"
gene 412979..413092
/gene="ffs"
/locus_tag="SF4554"
/db_xref="GeneID:1027718"
ncRNA 412979..413092
/ncRNA_class="other"
/gene="ffs"
/locus_tag="SF4554"
/product="4.5S RNA; component of ribonucleoprotein
particle"
/db_xref="GeneID:1027718"
gene 413203..413556
/gene="ybaA"
/locus_tag="SF0401"
/db_xref="GeneID:1027736"
CDS 413203..413556
/gene="ybaA"
/locus_tag="SF0401"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706350.1"
/db_xref="GeneID:1027736"
/translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
GKRMIYGGFESIIDE"
misc_feature 413203..413553
/gene="ybaA"
/locus_tag="SF0401"
/note="Uncharacterized conserved protein YbaA, DUF1428
family [Function unknown]; Region: YbaA; COG5507"
/db_xref="CDD:444258"
gene complement(413598..415148)
/gene="ylaB"
/locus_tag="SF0402"
/db_xref="GeneID:1027678"
CDS complement(413598..415148)
/gene="ylaB"
/locus_tag="SF0402"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706351.2"
/db_xref="GeneID:1027678"
/translation="MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTY
SSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNV
PQCSSLEHESPPDTFPELGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS
FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP
FLEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ
DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL
TLLIIRSVFEDMGDCLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIAL
ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD
ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF
LRWAEQHL"
misc_feature complement(413601..415148)
/gene="ylaB"
/locus_tag="SF0402"
/note="Redox-sensing c-di-GMP phosphodiesterase, contains
CSS-motif and EAL domains [Signal transduction
mechanisms]; Region: YjcC; COG4943"
/db_xref="CDD:443970"
gene complement(415312..415782)
/gene="ylaC"
/locus_tag="SF0403"
/db_xref="GeneID:1027725"
CDS complement(415312..415782)
/gene="ylaC"
/locus_tag="SF0403"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706352.2"
/db_xref="GeneID:1027725"
/translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV
AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE
WYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS"
misc_feature complement(415324..415782)
/gene="ylaC"
/locus_tag="SF0403"
/note="Inner membrane protein YlaC; Region: YlaC;
pfam10777"
/db_xref="CDD:431490"
gene complement(415898..416449)
/gene="ylaD"
/locus_tag="SF0404"
/pseudo
/db_xref="GeneID:1027712"
misc_feature complement(415898..416449)
/gene="ylaD"
/locus_tag="SF0404"
/note="Similar to Escherichia coli K12 transferase gi:
1786664 (184 aa). BLAST with identity of 98% in 183 aa.
This CDS ontains frameshift. The sequence has been checked
and is believed to be correct."
/pseudo
gene complement(416621..416839)
/gene="hha"
/locus_tag="SF0405"
/db_xref="GeneID:1027731"
CDS complement(416621..416839)
/gene="hha"
/locus_tag="SF0405"
/codon_start=1
/transl_table=11
/product="gene expression modulator"
/protein_id="NP_706353.2"
/db_xref="GeneID:1027731"
/translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
SAADHRLAELTMNKLYDKIPSSVWKFIR"
misc_feature complement(416624..416839)
/gene="hha"
/locus_tag="SF0405"
/note="hemolysin expression modulator Hha; Region:
PRK10945"
/db_xref="CDD:182856"
gene complement(416865..417239)
/gene="ybaJ"
/locus_tag="SF0406"
/db_xref="GeneID:1027533"
CDS complement(416865..417239)
/gene="ybaJ"
/locus_tag="SF0406"
/codon_start=1
/transl_table=11
/product="Hha toxicity attenuator"
/protein_id="NP_706354.1"
/db_xref="GeneID:1027533"
/translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAI
NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQALQKWRK
SGNRLFRCFVNATKENPASLSC"
misc_feature complement(416874..417239)
/gene="ybaJ"
/locus_tag="SF0406"
/note="Hha toxicity modulator TomB; Region: PRK10667"
/db_xref="CDD:182631"
gene complement(417785..420934)
/gene="acrB"
/locus_tag="SF0407"
/db_xref="GeneID:1027711"
CDS complement(417785..420934)
/gene="acrB"
/locus_tag="SF0407"
/note="Code: Q; COG: COG0841"
/codon_start=1
/transl_table=11
/product="multidrug efflux system protein AcrB"
/protein_id="NP_706355.1"
/db_xref="GeneID:1027711"
/translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
ISRFYPGADAKTVQDTVTQVIEQNMTGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
KKGFFGWLNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG
YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSTPFSVMLVVPLGVIGALL
AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
RRFSRKNEDIEHSHTVDHH"
misc_feature complement(417788..420934)
/gene="acrB"
/locus_tag="SF0407"
/note="multidrug efflux RND transporter permease subunit
AcrB; Region: PRK15127"
/db_xref="CDD:185081"
gene complement(420957..422150)
/gene="acrA"
/locus_tag="SF0408"
/db_xref="GeneID:1027728"
CDS complement(420957..422150)
/gene="acrA"
/locus_tag="SF0408"
/note="Code: Q; COG: COG0845"
/codon_start=1
/transl_table=11
/product="multidrug efflux system transporter AcrA"
/protein_id="NP_706356.2"
/db_xref="GeneID:1027728"
/translation="MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVT
VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ
ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQGYDQALADAQQANAAVTAA
KAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATVLATVQQLDPIYVDVTQ
SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
EQSKS"
misc_feature complement(420960..422150)
/gene="acrA"
/locus_tag="SF0408"
/note="multidrug efflux RND transporter periplasmic
adaptor subunit AcrA; Region: PRK15030"
/db_xref="CDD:184990"
gene 422292..422939
/gene="acrR"
/locus_tag="SF0409"
/db_xref="GeneID:1027719"
CDS 422292..422939
/gene="acrR"
/locus_tag="SF0409"
/note="Code: K; COG: COG1309"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor AcrR"
/protein_id="NP_706357.1"
/db_xref="GeneID:1027719"
/translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
misc_feature 422292..422936
/gene="acrR"
/locus_tag="SF0409"
/note="DNA-binding transcriptional repressor AcrR;
Provisional; Region: PRK10668"
/db_xref="CDD:182632"
gene 423067..426429
/gene="aefA"
/locus_tag="SF0410"
/db_xref="GeneID:1027717"
CDS 423067..426429
/gene="aefA"
/locus_tag="SF0410"
/note="Code: M; COG: COG3264"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706358.1"
/db_xref="GeneID:1027717"
/translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK
ADLQAQLDSLNKQKDLSAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM
RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS
LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ
RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD
EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE
QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF
VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWEKAWPAVFIAFL
AGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI
ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS
HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES
WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLSGRWIETVYLVIIWNLLYQ
TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM
FALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA
WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW
LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT
DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP
RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF
NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG"
misc_feature 423085..426426
/gene="aefA"
/locus_tag="SF0410"
/note="mechanosensitive channel MscK; Region: PRK11281"
/db_xref="CDD:236892"
gene complement(426641..426802)
/gene="ybaM"
/locus_tag="SF0411"
/db_xref="GeneID:1026020"
CDS complement(426641..426802)
/gene="ybaM"
/locus_tag="SF0411"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706359.1"
/db_xref="GeneID:1026020"
/translation="MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKK
LTHDDEAEK"
misc_feature complement(426662..426802)
/gene="ybaM"
/locus_tag="SF0411"
/note="hypothetical protein; Provisional; Region:
PRK11038"
/db_xref="CDD:182920"
gene complement(426816..427343)
/gene="priC"
/locus_tag="SF0412"
/db_xref="GeneID:1027710"
CDS complement(426816..427343)
/gene="priC"
/locus_tag="SF0412"
/codon_start=1
/transl_table=11
/product="primosomal replication protein N''"
/protein_id="NP_706360.1"
/db_xref="GeneID:1027710"
/translation="MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRAT
TLQSCLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP
PKISRWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
HALEKIENRLARLTR"
misc_feature complement(426819..427331)
/gene="priC"
/locus_tag="SF0412"
/note="primosomal replication protein N''; Provisional;
Region: PRK10093"
/db_xref="CDD:182236"
gene 427413..427790
/gene="ybaN"
/locus_tag="SF0413"
/db_xref="GeneID:1027720"
CDS 427413..427790
/gene="ybaN"
/locus_tag="SF0413"
/note="Code: S; COG: COG2832"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706361.1"
/db_xref="GeneID:1027720"
/translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP
RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL
VILACLLFYMWRIPVIDEKQEKH"
misc_feature 427413..427787
/gene="ybaN"
/locus_tag="SF0413"
/note="DUF454 family protein; Region: PRK10527"
/db_xref="CDD:182520"
gene 427943..428494
/gene="apt"
/locus_tag="SF0414"
/db_xref="GeneID:1027534"
CDS 427943..428494
/gene="apt"
/locus_tag="SF0414"
/note="Code: F; COG: COG0503"
/codon_start=1
/transl_table=11
/product="adenine phosphoribosyltransferase"
/protein_id="NP_706362.2"
/db_xref="GeneID:1027534"
/translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISENYDL
EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
LGGEQRLEKQGITSYSLVPFPGH"
misc_feature 427958..428488
/gene="apt"
/locus_tag="SF0414"
/note="adenine phosphoribosyltransferase; Provisional;
Region: PRK02304"
/db_xref="CDD:235028"
misc_feature order(428132..428134,428138..428140,428318..428326,
428330..428344,428414..428416)
/gene="apt"
/locus_tag="SF0414"
/note="active site"
/db_xref="CDD:206754"
gene 428623..430548
/gene="dnaX"
/locus_tag="SF0415"
/db_xref="GeneID:1027729"
CDS 428623..430548
/gene="dnaX"
/locus_tag="SF0415"
/note="Code: L; COG: COG2812"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunits gamma and tau"
/protein_id="NP_706363.1"
/db_xref="GeneID:1027729"
/translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEGNGERVMALINEAAARGI
EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTLVPPQ
SAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLAS
VTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELA
VKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGA
QQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQT
LRRFFDAELDEESIRPI"
misc_feature 428623..430545
/gene="dnaX"
/locus_tag="SF0415"
/note="DNA polymerase III subunits gamma and tau;
Validated; Region: PRK07994"
/db_xref="CDD:236138"
gene 430601..430930
/gene="ybaB"
/locus_tag="SF0416"
/db_xref="GeneID:1027735"
CDS 430601..430930
/gene="ybaB"
/locus_tag="SF0416"
/note="Code: S; COG: COG0718"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706364.2"
/db_xref="GeneID:1027735"
/translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
PGFKMPF"
misc_feature 430616..430906
/gene="ybaB"
/locus_tag="SF0416"
/note="DNA-binding nucleoid-associated protein YbaB/EfbC
[Transcription]; Region: YbaB; COG0718"
/db_xref="CDD:440482"
gene 430930..431535
/gene="recR"
/locus_tag="SF0417"
/db_xref="GeneID:1027757"
CDS 430930..431535
/gene="recR"
/locus_tag="SF0417"
/note="Code: L; COG: COG0353"
/codon_start=1
/transl_table=11
/product="recombination protein RecR"
/protein_id="NP_706365.1"
/db_xref="GeneID:1027757"
/translation="MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLA
QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
misc_feature 430939..431517
/gene="recR"
/locus_tag="SF0417"
/note="Recombinational DNA repair protein RecR
[Replication, recombination and repair]; Region: RecR;
COG0353"
/db_xref="CDD:440122"
gene 431645..433519
/gene="htpG"
/locus_tag="SF0418"
/db_xref="GeneID:1027713"
CDS 431645..433519
/gene="htpG"
/locus_tag="SF0418"
/note="Code: O; COG: COG0326"
/codon_start=1
/transl_table=11
/product="heat shock protein 90"
/protein_id="NP_706366.1"
/db_xref="GeneID:1027713"
/translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
ETVISWAKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
QEAIAKLLRFASTYTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
"
misc_feature 431654..433513
/gene="htpG"
/locus_tag="SF0418"
/note="heat shock protein 90; Provisional; Region:
PRK05218"
/db_xref="CDD:235366"
gene 433700..434344
/gene="adk"
/locus_tag="SF0419"
/db_xref="GeneID:1027707"
CDS 433700..434344
/gene="adk"
/locus_tag="SF0419"
/note="Code: F; COG: COG0563"
/codon_start=1
/transl_table=11
/product="adenylate kinase"
/protein_id="NP_706367.2"
/db_xref="GeneID:1027707"
/translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN
VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKQVAEVRADLEKILG"
misc_feature 433700..434341
/gene="adk"
/locus_tag="SF0419"
/note="adenylate kinase; Reviewed; Region: adk; PRK00279"
/db_xref="CDD:234711"
gene 434476..435438
/gene="hemH"
/locus_tag="SF0420"
/db_xref="GeneID:1027726"
CDS 434476..435438
/gene="hemH"
/locus_tag="SF0420"
/note="Code: H; COG: COG0276"
/codon_start=1
/transl_table=11
/product="ferrochelatase"
/protein_id="NP_706368.1"
/db_xref="GeneID:1027726"
/translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
WWPLLRGVILPLRSPRVAKLYASVWMEDGSPLMVYSRQQQQALAQRLPDTPVALGMSY
GSPSLESSVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL
ASALGMVPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET
LEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR"
misc_feature 434476..435435
/gene="hemH"
/locus_tag="SF0420"
/note="ferrochelatase; Region: hemH; TIGR00109"
/db_xref="CDD:272909"
gene complement(435576..436394)
/gene="ybaC"
/locus_tag="SF0421"
/db_xref="GeneID:1027722"
CDS complement(435576..436394)
/gene="ybaC"
/locus_tag="SF0421"
/note="Code: I; COG: COG0657"
/codon_start=1
/transl_table=11
/product="acetylesterase"
/protein_id="NP_706369.1"
/db_xref="GeneID:1027722"
/translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPSWPATGTIAEQRQYY
TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
HDRIMRLLASYSQCTVIGINYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
FAGDSAGAMLALASALWLRDKQIDCGKIAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ
QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLY"
misc_feature complement(435579..436385)
/gene="ybaC"
/locus_tag="SF0421"
/note="acetyl esterase; Region: PRK10162"
/db_xref="CDD:236660"
gene 436546..437850
/gene="gsk"
/locus_tag="SF0422"
/db_xref="GeneID:1027732"
CDS 436546..437850
/gene="gsk"
/locus_tag="SF0422"
/note="Code: G; COG: COG0524"
/codon_start=1
/transl_table=11
/product="inosine/guanosine kinase"
/protein_id="NP_706370.1"
/db_xref="GeneID:1027732"
/translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
DIEAKVDDEFIERYGLSAGHSLVIEDDVAEVLYQELKQKNLITHQFAGGTIGNTMHNY
SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
WVELVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSQEESYWDR"
misc_feature 436546..437847
/gene="gsk"
/locus_tag="SF0422"
/note="inosine/guanosine kinase; Provisional; Region:
PRK15074"
/db_xref="CDD:185033"
misc_feature order(436834..436836,437608..437610,437617..437619)
/gene="gsk"
/locus_tag="SF0422"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238177"
misc_feature order(437305..437307,437395..437397,437602..437604,
437611..437616)
/gene="gsk"
/locus_tag="SF0422"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238177"
gene complement(437983..439659)
/gene="ybaL"
/locus_tag="SF0423"
/db_xref="GeneID:1027716"
CDS complement(437983..439659)
/gene="ybaL"
/locus_tag="SF0423"
/note="Code: P; COG: COG0475"
/codon_start=1
/transl_table=11
/product="cation:proton antiport protein"
/protein_id="NP_706371.1"
/db_xref="GeneID:1027716"
/translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKSIAIPGAIAQIAVATLL
GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSVAALFLVRLFGHSQRTA
LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
IEIIARAHYDDEVTYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
misc_feature complement(437986..439659)
/gene="ybaL"
/locus_tag="SF0423"
/note="putative cation:proton antiport protein;
Provisional; Region: PRK10669"
/db_xref="CDD:182633"
gene complement(439897..441117)
/gene="fsr"
/locus_tag="SF0424"
/db_xref="GeneID:1027745"
CDS complement(439897..441117)
/gene="fsr"
/locus_tag="SF0424"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="fosmidomycin resistance protein"
/protein_id="NP_706372.1"
/db_xref="GeneID:1027745"
/translation="MAMSEQTQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI
LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS
GLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
SSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN
PLPRNKVVLAVSILLILIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAV
AAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLILPYARLHWTGVLTVIIGFILASAFS
AILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLL
GMLTIFLPDNRHKD"
misc_feature complement(439924..441030)
/gene="fsr"
/locus_tag="SF0424"
/note="Fosmidomycin resistance protein of the Major
Facilitator Superfamily of transporters; Region: MFS_FsR;
cd17478"
/db_xref="CDD:341031"
misc_feature complement(order(440029..440031,440038..440043,
440050..440055,440062..440064,440107..440109,
440119..440121,440131..440136,440278..440280,
440290..440292,440374..440376,440383..440391,
440398..440403,440410..440412,440635..440637,
440644..440649,440656..440658,440713..440715,
440722..440730,440734..440739,440887..440889,
440983..440985,440992..440997,441004..441009))
/gene="fsr"
/locus_tag="SF0424"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:341031"
gene 441335..442987
/gene="ushA"
/locus_tag="SF0425"
/db_xref="GeneID:1027755"
CDS 441335..442987
/gene="ushA"
/locus_tag="SF0425"
/note="Code: F; COG: COG0737"
/codon_start=1
/transl_table=11
/product="bifunctional UDP-sugar
hydrolase/5'-nucleotidase"
/protein_id="NP_706373.1"
/db_xref="GeneID:1027755"
/translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG
HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
QDLKIAVIGLTTDDTAKIGNLEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHM
GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCK
PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
YTPEIAENQQMISLLSPFQNKGKAQLEVKIGKTNGRLEGDRDKVRFVQTNMGRLILAA
QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
AQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR
LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ"
misc_feature 441335..442984
/gene="ushA"
/locus_tag="SF0425"
/note="bifunctional UDP-sugar hydrolase/5'-nucleotidase
periplasmic precursor; Reviewed; Region: ushA; PRK09558"
/db_xref="CDD:236566"
gene complement(443024..443503)
/gene="ybaK"
/locus_tag="SF0426"
/db_xref="GeneID:1027738"
CDS complement(443024..443503)
/gene="ybaK"
/locus_tag="SF0426"
/note="Code: S; COG: COG2606"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706374.1"
/db_xref="GeneID:1027738"
/translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV
YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGG
ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
misc_feature complement(443027..443503)
/gene="ybaK"
/locus_tag="SF0426"
/note="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK; Region:
PRK10670"
/db_xref="CDD:182634"
misc_feature complement(order(443117..443119,443198..443203,
443366..443368))
/gene="ybaK"
/locus_tag="SF0426"
/note="putative deacylase active site [active]"
/db_xref="CDD:237976"
gene complement(443707..444501)
/gene="ybaP"
/locus_tag="SF0427"
/db_xref="GeneID:1027724"
CDS complement(443707..444501)
/gene="ybaP"
/locus_tag="SF0427"
/codon_start=1
/transl_table=11
/product="ligase"
/protein_id="NP_706375.1"
/db_xref="GeneID:1027724"
/translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHSHLIGSIHMGS
HDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHIS
QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
AENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ
SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
misc_feature complement(443710..444414)
/gene="ybaP"
/locus_tag="SF0427"
/note="Tiki homology domain antagonizes Wnt function via
cleavage of amino-terminal residues; Region: Tiki;
cd14789"
/db_xref="CDD:350614"
gene 444585..444980
/gene="ybaQ"
/locus_tag="SF0428"
/db_xref="GeneID:1027714"
CDS 444585..444980
/gene="ybaQ"
/locus_tag="SF0428"
/note="Code: N; COG: COG3093"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706376.1"
/db_xref="GeneID:1027714"
/translation="MIQYVLASLFTGKQQLKTMKQATRKPTTPGDILLYEYLEPLDLK
INELAELLHVHRNRVSALINNNRKLTTEMAFRLAKVFDTTVDFRLNLQAAVDLWEVEN
NMRTQEELGRIETVAEYLARREERAKKVA"
misc_feature 444657..444890
/gene="ybaQ"
/locus_tag="SF0428"
/note="addiction module antidote protein, HigA family;
Region: antidote_HigA; TIGR02607"
/db_xref="CDD:274228"
misc_feature order(444687..444689,444699..444701,444774..444776)
/gene="ybaQ"
/locus_tag="SF0428"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238045"
misc_feature order(444696..444698,444771..444773)
/gene="ybaQ"
/locus_tag="SF0428"
/note="salt bridge [active]"
/db_xref="CDD:238045"
misc_feature order(444717..444722,444753..444755,444762..444764,
444774..444779)
/gene="ybaQ"
/locus_tag="SF0428"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:238045"
gene complement(445195..447699)
/gene="copA"
/locus_tag="SF0429"
/db_xref="GeneID:1027751"
CDS complement(445195..447699)
/gene="copA"
/locus_tag="SF0429"
/note="Code: P; COG: COG2217"
/codon_start=1
/transl_table=11
/product="copper exporting ATPase"
/protein_id="NP_706377.1"
/db_xref="GeneID:1027751"
/translation="MSQTIDLNLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMIVTADNRSL
WLVIGLITLAVMVFASGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW
FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEK
SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGT
VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAIFVPVVVVIALV
SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNDQQVDTKAIEADISA
QASQGATPVLLAIDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
IAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
misc_feature complement(445198..447699)
/gene="copA"
/locus_tag="SF0429"
/note="copper-exporting P-type ATPase CopA; Region: copA;
PRK10671"
/db_xref="CDD:182635"
gene 447961..448893
/gene="ybaS"
/locus_tag="SF0430"
/db_xref="GeneID:1027752"
CDS 447961..448893
/gene="ybaS"
/locus_tag="SF0430"
/note="Code: E; COG: COG2066"
/codon_start=1
/transl_table=11
/product="glutaminase"
/protein_id="NP_706378.1"
/db_xref="GeneID:1027752"
/translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVA
IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
ALELHGGKPLSPLVNAGAIATTSLINAENAEQRWQRILHIQQQLAGEQVALSDEVNQS
EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGVN
PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
misc_feature 447961..448890
/gene="ybaS"
/locus_tag="SF0430"
/note="glutaminase; Reviewed; Region: PRK12356"
/db_xref="CDD:237073"
gene 448896..450188
/gene="ybaT"
/locus_tag="SF0431"
/db_xref="GeneID:1027742"
CDS 448896..450188
/gene="ybaT"
/locus_tag="SF0431"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="amino acid/amine transport protein"
/protein_id="NP_706379.1"
/db_xref="GeneID:1027742"
/translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
STWGAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
AVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL
VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV
GYVIVVIGALLATASGINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
LIMLMTAALNLDSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
VGFIYSLWSQGSRALIWIIGAILLSLIVAMVMKRNKTV"
misc_feature 448896..450179
/gene="ybaT"
/locus_tag="SF0431"
/note="Serine transporter YbeC, amino acid:H+ symporter
family [Amino acid transport and metabolism]; Region:
PotE; COG0531"
/db_xref="CDD:440297"
gene 450313..450720
/gene="ybbI"
/locus_tag="SF0432"
/db_xref="GeneID:1027740"
CDS 450313..450720
/gene="ybbI"
/locus_tag="SF0432"
/note="Code: K; COG: COG0789"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator CueR"
/protein_id="NP_706380.1"
/db_xref="GeneID:1027740"
/translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
misc_feature 450313..450717
/gene="ybbI"
/locus_tag="SF0432"
/note="HTH-type transcriptional regulator CueR; Region:
PRK10227"
/db_xref="CDD:182320"
gene complement(450721..451176)
/gene="ybbJ"
/locus_tag="SF0433"
/db_xref="GeneID:1027743"
CDS complement(450721..451176)
/gene="ybbJ"
/locus_tag="SF0433"
/note="Code: NO; COG: COG1585"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706381.2"
/db_xref="GeneID:1027743"
/translation="MELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLV
VWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVL
ESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS"
misc_feature complement(450727..451167)
/gene="ybbJ"
/locus_tag="SF0433"
/note="Membrane protein implicated in regulation of
membrane protease activity [Posttranslational
modification, protein turnover, chaperones]; Region: YbbJ;
COG1585"
/db_xref="CDD:441193"
gene complement(451176..452093)
/gene="ybbK"
/locus_tag="SF0434"
/db_xref="GeneID:1027753"
CDS complement(451176..452093)
/gene="ybbK"
/locus_tag="SF0434"
/note="Code: O; COG: COG0330"
/codon_start=1
/transl_table=11
/product="protease"
/protein_id="NP_706382.1"
/db_xref="GeneID:1027753"
/translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM
MPLEASSLMGSIAGIAELVKDSANKRTQP"
misc_feature complement(451227..452090)
/gene="ybbK"
/locus_tag="SF0434"
/note="Regulator of protease activity HflC,
stomatin/prohibitin superfamily [Posttranslational
modification, protein turnover, chaperones]; Region: HflC;
COG0330"
/db_xref="CDD:440099"
gene 452239..452916
/gene="ybbL"
/locus_tag="SF0435"
/db_xref="GeneID:1026031"
CDS 452239..452916
/gene="ybbL"
/locus_tag="SF0435"
/note="Code: EPGR; COG: COG1101"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein YbbL"
/protein_id="NP_706383.1"
/db_xref="GeneID:1026031"
/translation="MQENSPLLQLQNVGYLAGDTKILNNINFSLRAGEFKLITGPSGC
GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
FPWQIRDQQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
EARYELA"
misc_feature 452239..452913
/gene="ybbL"
/locus_tag="SF0435"
/note="putative ABC transporter ATP-binding protein YbbL;
Provisional; Region: PRK10247"
/db_xref="CDD:182331"
gene 452876..453682
/gene="ybbM"
/locus_tag="SF0436"
/db_xref="GeneID:1027749"
CDS 452876..453682
/gene="ybbM"
/locus_tag="SF0436"
/note="Code: R; COG: COG0390"
/codon_start=1
/transl_table=11
/product="metal resistance protein"
/protein_id="NP_706384.1"
/db_xref="GeneID:1027749"
/translation="MPEKCRKHAMNSHNITNESLALALMLVVVAILISHKEKLALEKD
ILWSVGRAIIQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFI
SSFIAITVGAGITLAVLILSGAIEFIPMQVIPVAGMIAGNAMVAVGLCYNNLGQRVIS
EQQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGI
DPVKAIKYQIMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
misc_feature 452918..453655
/gene="ybbM"
/locus_tag="SF0436"
/note="TIGR00245 family protein; Region: TIGR00245"
/db_xref="CDD:272982"
gene complement(453745..454635)
/gene="ybbN"
/locus_tag="SF0437"
/db_xref="GeneID:1027746"
CDS complement(453745..454635)
/gene="ybbN"
/locus_tag="SF0437"
/note="Code: O; COG: COG3118"
/codon_start=1
/transl_table=11
/product="thioredoxin-like protein"
/protein_id="NP_706385.1"
/db_xref="GeneID:1027746"
/translation="MSKKISTTESDSMSVENIVNINESNLQQVLEQSMTTPVLFYFWS
ERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPV
DGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNG
EIGLLLAETLIALNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADKPEIQQLQ
QQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAA
LGTGDALASKYRRQLYALLY"
misc_feature complement(454279..454566)
/gene="ybbN"
/locus_tag="SF0437"
/note="ybbN protein family; ybbN is a hypothetical protein
containing a redox-inactive TRX-like domain. Its gene has
been sequenced from several gammaproteobacteria and
actinobacteria; Region: ybbN; cd02956"
/db_xref="CDD:239254"
misc_feature complement(454171..454260)
/gene="ybbN"
/locus_tag="SF0437"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276808"
misc_feature complement(454030..454221)
/gene="ybbN"
/locus_tag="SF0437"
/note="Tetratricopeptide repeat; Region: TPR_19;
pfam14559"
/db_xref="CDD:434038"
misc_feature complement(454075..454158)
/gene="ybbN"
/locus_tag="SF0437"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276808"
misc_feature complement(453748..454017)
/gene="ybbN"
/locus_tag="SF0437"
/note="Tetratricopeptide repeat; Region: TPR_20;
pfam14561"
/db_xref="CDD:434039"
misc_feature complement(453862..453957)
/gene="ybbN"
/locus_tag="SF0437"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276808"
misc_feature complement(453751..453849)
/gene="ybbN"
/locus_tag="SF0437"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276808"
gene complement(454660..455469)
/gene="ybbO"
/locus_tag="SF0438"
/db_xref="GeneID:1027730"
CDS complement(454660..455469)
/gene="ybbO"
/locus_tag="SF0438"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_706386.1"
/db_xref="GeneID:1027730"
/translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
GCRKPNDVERMNNMGFTGVLIDLDSPESVNRAADEVIALTDNCLYGIFNNAGFGMYGP
LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLERLLPGRVMDKILQG"
misc_feature complement(454663..455430)
/gene="ybbO"
/locus_tag="SF0438"
/note="SDR family oxidoreductase; Region: PRK08017"
/db_xref="CDD:181198"
gene complement(455459..456084)
/gene="tesA"
/locus_tag="SF0440"
/pseudo
/db_xref="GeneID:1027758"
misc_feature complement(455459..456084)
/gene="tesA"
/locus_tag="SF0440"
/note="Similar to Escherichia coli K12 acyl-CoA
thioesterase I; also functions as protease I gi: 1786702
(209 aa). BLAST with identity of 99% in 208 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct."
/pseudo
gene 456052..456738
/gene="ybbA"
/locus_tag="SF0439"
/db_xref="GeneID:1027538"
CDS 456052..456738
/gene="ybbA"
/locus_tag="SF0439"
/note="Code: R; COG: COG1136"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_706387.1"
/db_xref="GeneID:1027538"
/translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
LVNGQLQEEA"
misc_feature 456052..456735
/gene="ybbA"
/locus_tag="SF0439"
/note="putative ABC transporter ATP-binding protein YbbA;
Provisional; Region: PRK10584"
/db_xref="CDD:182569"
misc_feature 456178..456201
/gene="ybbA"
/locus_tag="SF0439"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213222"
misc_feature order(456187..456192,456196..456204,456334..456336,
456562..456567,456664..456666)
/gene="ybbA"
/locus_tag="SF0439"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213222"
misc_feature 456325..456336
/gene="ybbA"
/locus_tag="SF0439"
/note="Q-loop/lid; other site"
/db_xref="CDD:213222"
misc_feature 456490..456519
/gene="ybbA"
/locus_tag="SF0439"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213222"
misc_feature 456550..456567
/gene="ybbA"
/locus_tag="SF0439"
/note="Walker B; other site"
/db_xref="CDD:213222"
misc_feature 456574..456585
/gene="ybbA"
/locus_tag="SF0439"
/note="D-loop; other site"
/db_xref="CDD:213222"
misc_feature 456652..456672
/gene="ybbA"
/locus_tag="SF0439"
/note="H-loop/switch region; other site"
/db_xref="CDD:213222"
gene 456735..459150
/locus_tag="SF0441"
/pseudogene="unknown"
/db_xref="GeneID:1027754"
gene complement(459863..460957)
/gene="ybbB"
/locus_tag="SF0442"
/db_xref="GeneID:1023350"
CDS complement(459863..460957)
/gene="ybbB"
/locus_tag="SF0442"
/note="Code: R; COG: COG2603"
/codon_start=1
/transl_table=11
/product="tRNA 2-selenouridine synthase"
/protein_id="NP_706389.1"
/db_xref="GeneID:1023350"
/translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMD
NDERASVGTCYKQQGSDAALALGHKLVAGEIRQQRMYAWRAACLQNPQGILCCARGGQ
RSHIVQRWLHEAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ
QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDES
RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
EYCEYLHHGLSAIKRRLGLQRYNELAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYD
PMYRYQLEKKAEKVVFRGEWAEVAVWVKAQ"
misc_feature complement(459866..460951)
/gene="ybbB"
/locus_tag="SF0442"
/note="tRNA 2-selenouridine synthase; Provisional; Region:
PRK11784"
/db_xref="CDD:236982"
gene complement(461026..461952)
/gene="ybbS"
/locus_tag="SF0443"
/db_xref="GeneID:1027532"
CDS complement(461026..461952)
/gene="ybbS"
/locus_tag="SF0443"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator AllS"
/protein_id="NP_706390.1"
/db_xref="GeneID:1027532"
/translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT
GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLL
YNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFS
LDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSAGTLTKRVAWRLPGQK
EIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKF
GSCKAVEDIVTLFTQHRPEISGFLEIFGTPRS"
misc_feature complement(461029..461952)
/gene="ybbS"
/locus_tag="SF0443"
/note="HTH-type transcriptional activator AllS; Region:
PRK10094"
/db_xref="CDD:182237"
gene 462182..462664
/gene="ybbT"
/locus_tag="SF0444"
/db_xref="GeneID:1027733"
CDS 462182..462664
/gene="ybbT"
/locus_tag="SF0444"
/note="Code: E; COG: COG3194"
/codon_start=1
/transl_table=11
/product="ureidoglycolate hydrolase"
/protein_id="NP_706391.1"
/db_xref="GeneID:1027733"
/translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV
EILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL
STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
"
misc_feature 462182..462661
/gene="ybbT"
/locus_tag="SF0444"
/note="ureidoglycolate lyase; Region: PRK03606"
/db_xref="CDD:179606"
gene 462742..463557
/gene="ybbU"
/locus_tag="SF0445"
/db_xref="GeneID:1026034"
CDS 462742..463557
/gene="ybbU"
/locus_tag="SF0445"
/note="Code: K; COG: COG1414"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor AllR"
/protein_id="NP_706392.1"
/db_xref="GeneID:1026034"
/translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS
DISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVA
GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL
LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI
ASAIYDDVGRVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP"
misc_feature 462742..463554
/gene="ybbU"
/locus_tag="SF0445"
/note="HTH-type transcriptional repressor AllR; Region:
PRK10163"
/db_xref="CDD:182279"
gene 463647..465428
/gene="gcl"
/locus_tag="SF0446"
/db_xref="GeneID:1023368"
CDS 463647..465428
/gene="gcl"
/locus_tag="SF0446"
/note="Code: EH; COG: COG0028"
/codon_start=1
/transl_table=11
/product="glyoxylate carboligase"
/protein_id="NP_706393.2"
/db_xref="GeneID:1023368"
/translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR
HILARHVEGVSHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG
QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINAD
AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG
IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ
EMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTT
IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQ
FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG
VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE
LDNVMEFEDIADNVADAPTETCFMHYE"
misc_feature 463650..465413
/gene="gcl"
/locus_tag="SF0446"
/note="Glyoxylate carboligase [Secondary metabolites
biosynthesis, transport and catabolism]; Region: Gcl;
COG3960"
/db_xref="CDD:443160"
mobile_element complement(465718..466485)
/mobile_element_type="insertion sequence:IS1"
gene complement(465733..466128)
/gene="insB"
/locus_tag="SF0447"
/db_xref="GeneID:1027741"
CDS complement(465733..466128)
/gene="insB"
/locus_tag="SF0447"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706394.1"
/db_xref="GeneID:1027741"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQHIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(465736..466125)
/gene="insB"
/locus_tag="SF0447"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(466155..466430)
/gene="insA"
/locus_tag="SF0448"
/db_xref="GeneID:1027750"
CDS complement(466155..466430)
/gene="insA"
/locus_tag="SF0448"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706395.1"
/db_xref="GeneID:1027750"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YIASQPGTHQKIIDMAMNGVGCRASARIMDVGLNTVLRHLKNSGRSR"
misc_feature complement(<466158..466409)
/gene="insA"
/locus_tag="SF0448"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(466459..467130)
/gene="ylbA"
/locus_tag="SF0449"
/db_xref="GeneID:1023403"
CDS complement(466459..467130)
/gene="ylbA"
/locus_tag="SF0449"
/note="Code: S; COG: COG3257"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706396.1"
/db_xref="GeneID:1023403"
/translation="MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLIKNIIPDFEN
CDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFA
LSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLFSGNASELERIHYE
GMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLGNA
ANLLI"
misc_feature complement(466480..467100)
/gene="ylbA"
/locus_tag="SF0449"
/note="putative allantoin catabolism protein; Region:
ura-cupin; TIGR03214"
/db_xref="CDD:200251"
gene complement(467141..468298)
/gene="ylbB"
/locus_tag="SF0450"
/db_xref="GeneID:1027727"
CDS complement(467141..468298)
/gene="ylbB"
/locus_tag="SF0450"
/note="Code: E; COG: COG0624"
/codon_start=1
/transl_table=11
/product="hydantoin utilization protein"
/protein_id="NP_706397.4"
/db_xref="GeneID:1027727"
/translation="MTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLSGTE
YPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEG
SRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFADAMKACGFTLPNAPLTPRQAIKAF
VELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSR
ICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQL
ENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDA
QIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQE"
misc_feature complement(467144..468298)
/gene="ylbB"
/locus_tag="SF0450"
/note="allantoate amidohydrolase; Region: AllC; TIGR03176"
/db_xref="CDD:274471"
gene 468436..469023
/gene="ylbF"
/locus_tag="SF0451"
/db_xref="GeneID:1023367"
CDS 468436..469023
/gene="ylbF"
/locus_tag="SF0451"
/codon_start=1
/transl_table=11
/product="carboxylase"
/protein_id="NP_706398.1"
/db_xref="GeneID:1023367"
/translation="MAQGIRLGRFTVKQPQRYCLLRITPPSHPQPLAAAWMQRAEETG
LFGPLAMAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLL
AAWYYGALDARAGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPK
RTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP"
misc_feature 468679..468999
/gene="ylbF"
/locus_tag="SF0451"
/note="Protein of unknown function (DUF2877); Region:
DUF2877; pfam11392"
/db_xref="CDD:431864"
gene 469020..469913
/gene="arcC"
/locus_tag="SF0452"
/db_xref="GeneID:1023396"
CDS 469020..469913
/gene="arcC"
/locus_tag="SF0452"
/note="Code: E; COG: COG0549"
/codon_start=1
/transl_table=11
/product="carbamate kinase"
/protein_id="NP_706399.1"
/db_xref="GeneID:1023396"
/translation="MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYR
LAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVT
TVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQP
RKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGL
VILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRSKPAW
IGALSRIEETLAGEAGTCISL"
misc_feature 469020..469910
/gene="arcC"
/locus_tag="SF0452"
/note="carbamate kinase; Reviewed; Region: PRK09411"
/db_xref="CDD:181831"
misc_feature order(469038..469040,469044..469049,469167..469175,
469383..469385,469620..469628)
/gene="arcC"
/locus_tag="SF0452"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:239768"
misc_feature order(469047..469049,469683..469688,469701..469703,
469710..469712,469785..469790,469797..469799)
/gene="arcC"
/locus_tag="SF0452"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:239768"
misc_feature order(469047..469049,469683..469688,469701..469703,
469710..469712,469785..469790,469797..469799)
/gene="arcC"
/locus_tag="SF0452"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:239768"
misc_feature order(469197..469199,469230..469232,469239..469244,
469251..469253,469263..469268,469275..469277,
469284..469289,469299..469301,469326..469334,
469338..469340,469512..469514,469521..469523,
469602..469604)
/gene="arcC"
/locus_tag="SF0452"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:239768"
gene complement(470050..471117)
/gene="purK"
/locus_tag="SF0453"
/db_xref="GeneID:1023380"
CDS complement(470050..471117)
/gene="purK"
/locus_tag="SF0453"
/note="Code: F; COG: COG0026"
/codon_start=1
/transl_table=11
/product="5-(carboxyamino)imidazole ribonucleotide
synthase"
/protein_id="NP_706400.2"
/db_xref="GeneID:1023380"
/translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
VITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
RSEWPAVFDRLGELAIVKRRTGGYDGRGQWSLRANETEQLPAECYGECIVEQGINFSG
EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG
YVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV
NNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
LIPLLPPEYASGVIWAQSKFS"
misc_feature complement(470113..471117)
/gene="purK"
/locus_tag="SF0453"
/note="phosphoribosylaminoimidazole carboxylase ATPase
subunit; Reviewed; Region: PRK06019"
/db_xref="CDD:235674"
gene complement(471114..471623)
/gene="purE"
/locus_tag="SF0454"
/db_xref="GeneID:1027747"
CDS complement(471114..471623)
/gene="purE"
/locus_tag="SF0454"
/note="Code: F; COG: COG0041"
/codon_start=1
/transl_table=11
/product="5-(carboxyamino)imidazole ribonucleotide mutase"
/protein_id="NP_706401.2"
/db_xref="GeneID:1027747"
/translation="MSSRNNPARVAIVMGSKSDWATMQFAVEIFEILNVPHHVEVVSA
HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNGWRKAQTDEVL
ENPDPRGAA"
misc_feature complement(471126..471602)
/gene="purE"
/locus_tag="SF0454"
/note="Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
[Nucleotide transport and metabolism]; Region: PurE;
COG0041"
/db_xref="CDD:439811"
gene complement(471741..472463)
/gene="ybbF"
/locus_tag="SF0455"
/db_xref="GeneID:1027739"
CDS complement(471741..472463)
/gene="ybbF"
/locus_tag="SF0455"
/note="Code: S; COG: COG2908"
/codon_start=1
/transl_table=11
/product="UDP-2,3-diacylglucosamine hydrolase"
/protein_id="NP_706402.1"
/db_xref="GeneID:1027739"
/translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE
AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANS
KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
WHTEGSMVKVTADDVELIHFPF"
misc_feature complement(471744..472463)
/gene="ybbF"
/locus_tag="SF0455"
/note="UDP-2,3-diacylglucosamine hydrolase; Provisional;
Region: PRK05340"
/db_xref="CDD:235420"
misc_feature complement(order(471873..471875,471879..471881,
472122..472124,472224..472229,472341..472343,
472434..472436,472440..472442))
/gene="ybbF"
/locus_tag="SF0455"
/note="putative active site [active]"
/db_xref="CDD:277343"
misc_feature complement(order(471873..471875,471879..471881,
472122..472124,472227..472229,472341..472343,
472434..472436,472440..472442))
/gene="ybbF"
/locus_tag="SF0455"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:277343"
gene complement(472466..472960)
/gene="ppiB"
/locus_tag="SF0456"
/db_xref="GeneID:1027535"
CDS complement(472466..472960)
/gene="ppiB"
/locus_tag="SF0456"
/note="Code: O; COG: COG0652"
/codon_start=1
/transl_table=11
/product="peptidyl-prolyl cis-trans isomerase B"
/protein_id="NP_706403.1"
/db_xref="GeneID:1027535"
/translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
VDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRNGMHQDVPKEDVIIESV
TVSE"
misc_feature complement(472469..472960)
/gene="ppiB"
/locus_tag="SF0456"
/note="peptidylprolyl isomerase B; Region: PRK10791"
/db_xref="CDD:182734"
misc_feature complement(order(472601..472603,472637..472642,
472664..472666,472688..472705,472808..472810,
472814..472819,472826..472828,472832..472834))
/gene="ppiB"
/locus_tag="SF0456"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238901"
gene 473134..474519
/gene="cysS"
/locus_tag="SF0457"
/db_xref="GeneID:1023360"
CDS 473134..474519
/gene="cysS"
/locus_tag="SF0457"
/note="Code: J; COG: COG0215"
/codon_start=1
/transl_table=11
/product="cysteinyl-tRNA synthetase"
/protein_id="NP_706404.1"
/db_xref="GeneID:1023360"
/translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
DQLQAGARVDVVDDKRNRMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG
GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
DGPQGTTWRRK"
misc_feature 473134..474516
/gene="cysS"
/locus_tag="SF0457"
/note="Cysteinyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: CysS; COG0215"
/db_xref="CDD:439985"
gene complement(474555..475064)
/gene="ybcI"
/locus_tag="SF0458"
/db_xref="GeneID:1027756"
CDS complement(474555..475064)
/gene="ybcI"
/locus_tag="SF0458"
/note="Code: R; COG: COG1988"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706405.1"
/db_xref="GeneID:1027756"
/translation="MPTVITHAAVPLCIGLGLGSKGLLFAGIILAMLPDADVLSFKFG
VAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSV
TTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLL
MGMLWWRRR"
misc_feature complement(474675..475052)
/gene="ybcI"
/locus_tag="SF0458"
/note="Membrane-bound metal-dependent hydrolase YbcI,
DUF457 family [General function prediction only]; Region:
YbcI; COG1988"
/db_xref="CDD:441591"
gene complement(475172..475405)
/gene="ybcJ"
/locus_tag="SF0459"
/db_xref="GeneID:1027734"
CDS complement(475172..475405)
/gene="ybcJ"
/locus_tag="SF0459"
/note="Code: S; COG: COG2501"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706406.4"
/db_xref="GeneID:1027734"
/translation="MIHRVSNMATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEG
QVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA"
misc_feature complement(475175..475384)
/gene="ybcJ"
/locus_tag="SF0459"
/note="ribosome-associated protein YbcJ; Region: PRK11507"
/db_xref="CDD:183166"
misc_feature complement(order(475223..475225,475229..475252,
475271..475273,475277..475282,475289..475294,
475298..475303,475307..475309))
/gene="ybcJ"
/locus_tag="SF0459"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:238095"
gene complement(475386..476252)
/gene="folD"
/locus_tag="SF0460"
/db_xref="GeneID:1027744"
CDS complement(475386..476252)
/gene="folD"
/locus_tag="SF0460"
/note="Code: H; COG: COG0190"
/codon_start=1
/transl_table=11
/product="bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase"
/protein_id="NP_706407.1"
/db_xref="GeneID:1027744"
/translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN
PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLP
AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
QACVEYHDPQGE"
misc_feature complement(475398..476252)
/gene="folD"
/locus_tag="SF0460"
/note="bifunctional methylenetetrahydrofolate
dehydrogenase/methenyltetrahydrofolate cyclohydrolase
FolD; Region: PRK10792"
/db_xref="CDD:236760"
gene 476700..477275
/gene="sfmA"
/locus_tag="SF0461"
/db_xref="GeneID:1023379"
CDS 476700..477275
/gene="sfmA"
/locus_tag="SF0461"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="type-1 fimbrial protein subunit A"
/protein_id="NP_706408.1"
/db_xref="GeneID:1023379"
/translation="MESINEIEGIYMKLRFISSALAAALFAATGSYAAVVDGGTIHFE
GELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAV
AFSGQADAINDNLLAIVSSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTN
VLHFSARYKGTGTSASAGQANADATFIMRYE"
misc_feature 476733..477272
/gene="sfmA"
/locus_tag="SF0461"
/note="type 1 fimbrial protein subunit FimA; Region:
PRK15194"
/db_xref="CDD:237920"
gene 477495..478187
/gene="sfmC"
/locus_tag="SF0462"
/db_xref="GeneID:1023353"
CDS 477495..478187
/gene="sfmC"
/locus_tag="SF0462"
/note="Code: N; COG: COG3121"
/codon_start=1
/transl_table=11
/product="fimbrial chaperone protein FimC"
/protein_id="NP_706409.1"
/db_xref="GeneID:1023353"
/translation="MMTKIKLLMLMIFYLIISASAHAAGGIALGATRIIYPADAKQTA
VWIKNSHTNELFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAAD
RESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR
SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVSSQIPLPSGVQGKLKFQTVNDY
GSVTPVREVNLN"
misc_feature 477495..478181
/gene="sfmC"
/locus_tag="SF0462"
/note="molecular chaperone FimC; Region: PRK15195"
/db_xref="CDD:185117"
gene 478218..478718
/locus_tag="SF0463"
/db_xref="GeneID:1023348"
CDS 478218..478718
/locus_tag="SF0463"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706410.1"
/db_xref="GeneID:1023348"
/translation="MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFL
LENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMP
CFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIAL
LSSAHG"
misc_feature 478245..>478715
/locus_tag="SF0463"
/note="outer membrane usher protein FimD; Region:
PRK15198"
/db_xref="CDD:185120"
mobile_element complement(478714..479481)
/mobile_element_type="insertion sequence:IS1"
gene complement(478729..479124)
/gene="insB"
/locus_tag="SF0464"
/db_xref="GeneID:1023339"
CDS complement(478729..479124)
/gene="insB"
/locus_tag="SF0464"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706411.1"
/db_xref="GeneID:1023339"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(478732..479121)
/gene="insB"
/locus_tag="SF0464"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(479151..479426)
/gene="insA"
/locus_tag="SF0465"
/db_xref="GeneID:1023351"
CDS complement(479151..479426)
/gene="insA"
/locus_tag="SF0465"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706412.1"
/db_xref="GeneID:1023351"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<479154..479405)
/gene="insA"
/locus_tag="SF0465"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(479460..479753)
/locus_tag="SF0466"
/db_xref="GeneID:1023382"
CDS complement(479460..479753)
/locus_tag="SF0466"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706413.1"
/db_xref="GeneID:1023382"
/translation="MYQSTIYRPNGKLSAPMRLVTMKPTSVIIMDTHPIIRMSIEVLL
QKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRVMLPTY"
misc_feature complement(<479478..479690)
/locus_tag="SF0466"
/note="fimbriae biosynthesis transcriptional regulator
FimZ; Region: PRK09935"
/db_xref="CDD:182154"
gene 479933..480009
/locus_tag="SF4444"
/db_xref="GeneID:3161848"
tRNA 479933..480009
/locus_tag="SF4444"
/product="tRNA-Arg"
/codon_recognized="AGA"
/db_xref="GeneID:3161848"
gene complement(480055..480816)
/gene="envY"
/locus_tag="SF0467"
/db_xref="GeneID:1023377"
CDS complement(480055..480816)
/gene="envY"
/locus_tag="SF0467"
/note="Code: K; COG: COG2207"
/codon_start=1
/transl_table=11
/product="envelope protein"
/protein_id="NP_706414.1"
/db_xref="GeneID:1023377"
/translation="MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNV
IELSTLNHVLITHINRNIINDYLLFLNKKLTCVKPWSRLATPVIACHSRTPEVFRLAT
NHSKQQSSKPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQ
HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQ
LCGYSSTSYFISVFKAFYSLTPLNYLAKQRQKVMW"
misc_feature complement(480070..480795)
/gene="envY"
/locus_tag="SF0467"
/note="DNA-binding transcriptional regulator GadX;
Provisional; Region: PRK09978"
/db_xref="CDD:137624"
gene complement(480999..481889)
/gene="ybcH"
/locus_tag="SF0468"
/db_xref="GeneID:1023347"
CDS complement(480999..481889)
/gene="ybcH"
/locus_tag="SF0468"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706415.1"
/db_xref="GeneID:1023347"
/translation="MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLM
SQLRFQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQTGLKLIVGLNADPEFFMH
QKQSPAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLL
TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKL
TAEQRERYLQASADCQSSAPASGIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCG
KDMLYFSLRYLPVAHGILEY"
misc_feature complement(481002..481889)
/gene="ybcH"
/locus_tag="SF0468"
/note="DUF4434 family protein; Region: PRK09936"
/db_xref="CDD:182155"
gene complement(481890..484858)
/gene="nfrA"
/locus_tag="SF0469"
/pseudo
/db_xref="GeneID:1027540"
misc_feature complement(481890..484858)
/gene="nfrA"
/locus_tag="SF0469"
/note="'Similar to Escherichia coli K12 bacteriophage N4
receptor, outer membrane protein gi: 1786780 (991 aa).
BLAST with identity of 97% in 989 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct.'"
/pseudo
gene complement(484845..487082)
/gene="nfrB"
/locus_tag="SF0470"
/db_xref="GeneID:1027690"
CDS complement(484845..487082)
/gene="nfrB"
/locus_tag="SF0470"
/codon_start=1
/transl_table=11
/product="bacteriophage N4 adsorption protein B"
/protein_id="NP_706416.1"
/db_xref="GeneID:1027690"
/translation="MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRR
IKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHI
FVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANF
AFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSEL
HGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGNGIAFDVQSLTEDYDIGFRLKE
KGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGI
VFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWH
FLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFM
ANWRVLKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTA
LRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVA
LHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYA
RRRGHDPRAMLYNAVQHQWLTEQQTGEIWRQYVPHQFLFAEILTTLGHINRSAINVLL
LRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLES
ENEGE"
misc_feature complement(484872..487064)
/gene="nfrB"
/locus_tag="SF0470"
/note="phage adsorption protein NrfB; Region: nfrB;
PRK11234"
/db_xref="CDD:236884"
gene complement(487232..488674)
/gene="ybcZ"
/locus_tag="SF0471"
/db_xref="GeneID:1023354"
CDS complement(487232..488674)
/gene="ybcZ"
/locus_tag="SF0471"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="sensor kinase CusS"
/protein_id="NP_706417.2"
/db_xref="GeneID:1023354"
/translation="MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIIIHSVKVHFA
EQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYHSP
GAPDIREFARDAIPDKDARGGEVYLLSGPTIMMPGHGHGHMEHSNWRMINLPVGPLVD
GKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSR
QIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTP
ITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKK
MLNLADEVGKVFDFFEALAEDRGVELRFVGDKRQVAGDPLMLRRALSNLLSNALRYTP
TRETIVVRCQTVDHQVQVSVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLA
IVKSIVVAHKGTVAVTSDARGTRFVITLPA"
misc_feature complement(487238..488674)
/gene="ybcZ"
/locus_tag="SF0471"
/note="Cu(+)/Ag(+) sensor histidine kinase; Region:
PRK09835"
/db_xref="CDD:182101"
gene complement(488664..489347)
/gene="ylcA"
/locus_tag="SF0472"
/db_xref="GeneID:1023340"
CDS complement(488664..489347)
/gene="ylcA"
/locus_tag="SF0472"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator CusR"
/protein_id="NP_706418.1"
/db_xref="GeneID:1023340"
/translation="MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGD
YDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKP
FAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLE
FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKLLRGKIDNDFEPKLIQTVRGVG
YMLEVPDGQ"
misc_feature complement(488667..489347)
/gene="ylcA"
/locus_tag="SF0472"
/note="DNA-binding transcriptional activator CusR;
Provisional; Region: PRK09836"
/db_xref="CDD:182102"
gene 489504..490886
/gene="ylcB"
/locus_tag="SF0473"
/db_xref="GeneID:1023358"
CDS 489504..490886
/gene="ylcB"
/locus_tag="SF0473"
/note="Code: MN; COG: COG1538"
/codon_start=1
/transl_table=11
/product="copper/silver efflux system outer membrane
protein CusC"
/protein_id="NP_706419.1"
/db_xref="GeneID:1023358"
/translation="MSPCKLLPFCVALALTGCSLAPDYQRPVMPVPQQFSLSQNGLVN
AADNYQNVGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQL
NGEGSGSWSGNLKGDSATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRA
VHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQAR
GVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSGSLQSVKLPAGLSSQI
LLQRPDIMEAEHALMASNANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNF
IPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLDDQIS
AQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEIYL
YTALGGGWQQ"
misc_feature 489504..490883
/gene="ylcB"
/locus_tag="SF0473"
/note="Cu(I)/Ag(I) efflux RND transporter outer membrane
protein; Region: PRK09837"
/db_xref="CDD:182103"
gene 490910..491242
/gene="ylcC"
/locus_tag="SF0474"
/db_xref="GeneID:1023418"
CDS 490910..491242
/gene="ylcC"
/locus_tag="SF0474"
/codon_start=1
/transl_table=11
/product="periplasmic copper-binding protein"
/protein_id="NP_706420.1"
/db_xref="GeneID:1023418"
/translation="MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVV
KGVDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSL
LQDIKVSQ"
misc_feature 490910..491239
/gene="ylcC"
/locus_tag="SF0474"
/note="periplasmic copper-binding protein; Provisional;
Region: PRK09838"
/db_xref="CDD:182104"
mobile_element complement(492504..493809)
/mobile_element_type="insertion sequence:IS629"
gene complement(492546..493214)
/locus_tag="SF0476"
/pseudogene="unknown"
/db_xref="GeneID:1023344"
gene complement(493429..493755)
/locus_tag="SF0477"
/db_xref="GeneID:1023424"
CDS complement(493429..493755)
/locus_tag="SF0477"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706422.1"
/db_xref="GeneID:1023424"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWVRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature complement(493465..493752)
/locus_tag="SF0477"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 493808..494886
/locus_tag="SF0478"
/pseudo
/db_xref="GeneID:1023412"
misc_feature 493808..494886
/locus_tag="SF0478"
/note="Similar to Shigella flexneri Bifunctional tail
protein sp: Q9XJP3 (624 aa). BLAST with identity of 96% in
392 aa. This CDS has been truncated. The sequence has been
checked and is believed to be correct."
/pseudo
mobile_element complement(494885..496215)
/mobile_element_type="insertion sequence:IS2"
gene complement(494896..495687)
/locus_tag="SF0479"
/db_xref="GeneID:1023345"
CDS complement(494896..495687)
/locus_tag="SF0479"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion element IS2 transposase InsD"
/protein_id="NP_706423.1"
/db_xref="GeneID:1023345"
/translation="MDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELD
GMPAINAKRVYRLMRQNALLLERKPAVSPSKRAHTGRVAVKESNQRWCSDGFEFCCDN
GERLRVTFALDCCDREALHWARTTGGFNSETVQDVMLGAVERRFGNDLPSFPVEWLTD
NGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTA
AKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(494899..495684)
/locus_tag="SF0479"
/note="insertion element IS2 transposase InsD;
Provisional; Region: PRK14702"
/db_xref="CDD:237792"
gene complement(495759..496169)
/locus_tag="SF0480"
/db_xref="GeneID:1023346"
CDS complement(495759..496169)
/locus_tag="SF0480"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706424.1"
/db_xref="GeneID:1023346"
/translation="MIVLILVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMKNELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(495762..496124)
/locus_tag="SF0480"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 496942..500085
/gene="ybdE"
/locus_tag="SF0481"
/db_xref="GeneID:1023408"
CDS 496942..500085
/gene="ybdE"
/locus_tag="SF0481"
/note="Code: P; COG: COG3696"
/codon_start=1
/transl_table=11
/product="cation efflux system protein CusA"
/protein_id="NP_706425.1"
/db_xref="GeneID:1023408"
/translation="MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSD
VQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTD
PYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQ
DWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAG
GSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQIGPKMRRGIA
ELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRA
IDNLSGKLLEEFIVVAVVCAPFLWHVRSALVAIISLPLGLCIAFIVMPFQGLNANIMS
LGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPAL
FISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGK
IPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQIN
EGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMV
ETTIQLKPQDQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIG
IKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTV
ADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITL
ADVADVKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIAEKVQLKPGTSV
AFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWL
LWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAEPSLNNPQTFSEQKLDEA
LYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFI
IPAAYKLMWLHRHRVRN"
misc_feature 496942..500079
/gene="ybdE"
/locus_tag="SF0481"
/note="AcrB/AcrD/AcrF family; Region: ACR_tran; cl47191"
/db_xref="CDD:481531"
gene 500186..501562
/gene="pheP"
/locus_tag="SF0482"
/db_xref="GeneID:1023406"
CDS 500186..501562
/gene="pheP"
/locus_tag="SF0482"
/note="Code: E; COG: COG1113"
/codon_start=1
/transl_table=11
/product="phenylalanine transporter"
/protein_id="NP_706426.2"
/db_xref="GeneID:1023406"
/translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
EFWFALIKVLAIIGMIGFGLWLLFSGYGGEKASIDNLWRYGGFFATGWNGLILSLAVI
MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSN
SSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
VSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
AFKTLRRK"
misc_feature 500186..501559
/gene="pheP"
/locus_tag="SF0482"
/note="phenylalanine transporter; Provisional; Region:
PRK10249"
/db_xref="CDD:236667"
gene complement(501630..502877)
/gene="ybdG"
/locus_tag="SF0483"
/db_xref="GeneID:1023355"
CDS complement(501630..502877)
/gene="ybdG"
/locus_tag="SF0483"
/note="Code: M; COG: COG0668"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706427.2"
/db_xref="GeneID:1023355"
/translation="MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEY
LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
FGLRLHQSPTGNDIRSLAGAFKQ"
misc_feature complement(501690..502451)
/gene="ybdG"
/locus_tag="SF0483"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:459999"
gene complement(502985..504976)
/gene="nfnB"
/locus_tag="SF0485"
/pseudo
/db_xref="GeneID:1023410"
misc_feature complement(502985..504976)
/gene="nfnB"
/locus_tag="SF0485"
/note="Similar to Escherichia coli K12 oxygen-insensitive
NAD(P)H nitroreductase gi: 1786792 (218 aa). BLAST with
identity of 98% in 663 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
/pseudo
mobile_element complement(503321..504649)
/mobile_element_type="insertion sequence:iso-IS10R"
gene complement(503334..504542)
/locus_tag="SF0484"
/db_xref="GeneID:1023381"
CDS complement(503334..504542)
/locus_tag="SF0484"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_706428.1"
/db_xref="GeneID:1023381"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPEQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature complement(503373..504428)
/locus_tag="SF0484"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene complement(505070..505438)
/gene="ybdF"
/locus_tag="SF0486"
/db_xref="GeneID:1023429"
CDS complement(505070..505438)
/gene="ybdF"
/locus_tag="SF0486"
/note="Code: S; COG: COG2315"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706429.1"
/db_xref="GeneID:1023429"
/translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS
ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYSGEEISEALLRDLIND
SWNLVVDGLAKRDQKRVRPG"
misc_feature complement(505073..505438)
/gene="ybdF"
/locus_tag="SF0486"
/note="MmcQ/YjbR family DNA-binding protein; Region:
PRK10250"
/db_xref="CDD:182333"
gene complement(505503..505751)
/gene="ybdJ"
/locus_tag="SF0487"
/db_xref="GeneID:1023422"
CDS complement(505503..505751)
/gene="ybdJ"
/locus_tag="SF0487"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706430.1"
/db_xref="GeneID:1023422"
/translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTMFHL
MDLSQLYTLLFCLWFLVLSAIEYFVLRFIWRRWFSLAD"
misc_feature complement(505515..505748)
/gene="ybdJ"
/locus_tag="SF0487"
/note="Protein of unknown function (DUF1158); Region:
DUF1158; pfam06643"
/db_xref="CDD:399557"
gene complement(505817..506935)
/gene="ybdK"
/locus_tag="SF0488"
/db_xref="GeneID:1023393"
CDS complement(505817..506935)
/gene="ybdK"
/locus_tag="SF0488"
/note="Code: S; COG: COG2170"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl:cysteine ligase"
/protein_id="NP_706431.1"
/db_xref="GeneID:1023393"
/translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNK
ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTPPF
QKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPH
FIALSAASPYMQGTDTRFAPSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID
SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD
YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEAL
HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD"
misc_feature complement(505820..506935)
/gene="ybdK"
/locus_tag="SF0488"
/note="gamma-glutamyl:cysteine ligase; Provisional;
Region: PRK13516"
/db_xref="CDD:237407"
mobile_element 507320..507801
/note="partial"
/mobile_element_type="insertion sequence:IS150"
gene 507366..507848
/locus_tag="SF0489"
/db_xref="GeneID:1023441"
CDS 507366..507848
/locus_tag="SF0489"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion element IS150 protein"
/protein_id="NP_706432.1"
/db_xref="GeneID:1023441"
/translation="MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVA
LYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLK
VYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEVRCTGNSGHYHLFFF
"
misc_feature 507393..507545
/locus_tag="SF0489"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:463908"
misc_feature 507429..>507764
/locus_tag="SF0489"
/note="IS630 family transposase; Region: transpos_IS630;
NF033545"
/db_xref="CDD:468076"
mobile_element complement(507802..508785)
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene complement(507845..508663)
/locus_tag="SF0490"
/db_xref="GeneID:1023409"
CDS complement(507845..508663)
/locus_tag="SF0490"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706433.1"
/db_xref="GeneID:1023409"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature complement(507872..>508663)
/locus_tag="SF0490"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
mobile_element complement(508786..510091)
/mobile_element_type="insertion sequence:IS629"
gene complement(508828..509711)
/locus_tag="SF0491"
/pseudogene="unknown"
/db_xref="GeneID:1023416"
gene complement(509711..510037)
/locus_tag="SF0492"
/db_xref="GeneID:1027541"
CDS complement(509711..510037)
/locus_tag="SF0492"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706435.1"
/db_xref="GeneID:1027541"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWVRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature complement(509747..510034)
/locus_tag="SF0492"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(510089..510310)
/locus_tag="SF0493"
/db_xref="GeneID:1023398"
CDS complement(510089..510310)
/locus_tag="SF0493"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706436.1"
/db_xref="GeneID:1023398"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKA"
misc_feature complement(510095..510304)
/locus_tag="SF0493"
/note="Transposase; Region: HTH_Tnp_1; pfam01527"
/db_xref="CDD:426308"
mobile_element complement(510091..510374)
/note="partial"
/mobile_element_type="insertion sequence:IS600"
mobile_element 510375..511335
/note="partial"
/mobile_element_type="insertion sequence:IS150"
gene 510460..511311
/locus_tag="SF0494"
/db_xref="GeneID:1026045"
CDS 510460..511311
/locus_tag="SF0494"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion element IS150 protein InsB"
/protein_id="NP_706437.1"
/db_xref="GeneID:1026045"
/translation="MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVK
KRIGEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRG
EVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSLSER
PVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNCL
DNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRN
QTYMPRV"
misc_feature <510463..511284
/locus_tag="SF0494"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 511407..511559
/locus_tag="SF0494a"
/db_xref="GeneID:16608305"
CDS 511407..511559
/locus_tag="SF0494a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439230.1"
/db_xref="GeneID:16608305"
/translation="MLTKYALVAVIVLCLTVLGFTLLAGDSLCEFTVKERNIEFRAVL
AYEPKK"
misc_feature 511407..511556
/locus_tag="SF0494a"
/note="Hok/gef family; Region: HOK_GEF; cl27487"
/db_xref="CDD:452751"
gene complement(512184..512813)
/gene="entD"
/locus_tag="SF0495"
/db_xref="GeneID:1023411"
CDS complement(512184..512813)
/gene="entD"
/locus_tag="SF0495"
/note="Code: Q; COG: COG2977"
/codon_start=1
/transl_table=11
/product="enterobactin synthase multienzyme complex
phosphopantetheinyltransferase"
/protein_id="NP_706438.2"
/db_xref="GeneID:1023411"
/translation="MVDMKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQH
AGRKRKTEHLAGRIAAVYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVV
SRQPIGVDIEEIFSAQTATELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKA
SEIQTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD"
misc_feature complement(512193..512813)
/gene="entD"
/locus_tag="SF0495"
/note="enterobactin synthase subunit EntD; Region:
PRK10251"
/db_xref="CDD:182334"
gene complement(512979..515219)
/gene="fepA"
/locus_tag="SF0496"
/db_xref="GeneID:1023390"
CDS complement(512979..515219)
/gene="fepA"
/locus_tag="SF0496"
/note="Code: P; COG: COG1629"
/codon_start=1
/transl_table=11
/product="outer membrane receptor FepA"
/protein_id="NP_706439.1"
/db_xref="GeneID:1023390"
/translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN
LQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE
NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD
KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS
RQGNLYAGDTQNTNSDAYTRSKYGDETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHT
RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN
QQRMKDLSSNTQALTGTNTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTP
GLRFDHHSIVGNNWSPALNISQGLGDDFTLKIGIARAYKAPSLYQTNPNYILYSKGQG
CYASAGGCYLQGNDDLKVETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG
QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII
PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS
ATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM
SINTHF"
misc_feature complement(512982..515219)
/gene="fepA"
/locus_tag="SF0496"
/note="FepA family TonB-dependent siderophore receptor;
Region: PRK13524"
/db_xref="CDD:237410"
gene 515462..516664
/gene="fes"
/locus_tag="SF0497"
/db_xref="GeneID:1023384"
CDS 515462..516664
/gene="fes"
/locus_tag="SF0497"
/note="Code: P; COG: COG2382"
/codon_start=1
/transl_table=11
/product="enterobactin/ferric enterobactin esterase"
/protein_id="NP_706440.1"
/db_xref="GeneID:1023384"
/translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS
TIKRVWVYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIF
SAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQAPLQPGWDCPQA
PEIPAKEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSL
THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDRADRTV
VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG
LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW
QPLFHDRS"
misc_feature 515462..516646
/gene="fes"
/locus_tag="SF0497"
/note="enterobactin/ferric enterobactin esterase;
Provisional; Region: PRK10439"
/db_xref="CDD:236695"
gene 516881..520726
/gene="entF"
/locus_tag="SF0498"
/db_xref="GeneID:1023397"
CDS 516881..520726
/gene="entF"
/locus_tag="SF0498"
/note="Code: Q; COG: COG1020"
/codon_start=1
/transl_table=11
/product="enterobactin synthase subunit F"
/protein_id="NP_706441.1"
/db_xref="GeneID:1023397"
/translation="MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGEVDAPLL
ARAVVAGLAQADTLRMRFTEDNGEVWQWVDDALIFELPEIIDLRTNIDPHGTAQALML
ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCAL
LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWVEQRRQLPPPASLSPAPLAGR
SASADILRLKMEFTDGEFRQLATQLSGVQRTDLALALTALWLGRLCNRMDYAAGFIFM
RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLATRLAAQLKKMRRHQRYDAEQ
IVRDSGRAAGDEPLFGPVLNIKVFDYQLDIPGVQAQTHTLATGPVNDLELALFPDEHG
DLSIEILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQIN
ATQVEIPETTLSALVAEQAAKTPDAPALADARYLFSYREMHEQVVALANLLRERGVKP
GDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQ
LPRFSDVPNLTNLCYNAPLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAI
VNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAM
QQFFAEYGVTTTHFVPSMLAAFVASLTPQTARQSCVTLKQVFCSGEALPADLCREWQQ
LTGAPLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPV
PPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEY
LGRSDDQLKIRGQRIELGEIDRVMQALPDVKQAVTHACVINQAAATGGDARQLVGYLV
SQSGLPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPLPELKAQAP
GRAPKAGSETIIAAAFASLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQFARQVTP
GQVMVASTVAKLATIIDGEEDSSRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVL
SRYLDPQWSIIGIQSPRPHGPMQTATNLDEVCEAHLATLLEQQPHGIAARLRARGEQV
AFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGN
YADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQDCAHVDI
ISPGAFVKIGPIIRATLNR"
misc_feature 516881..520720
/gene="entF"
/locus_tag="SF0498"
/note="enterobactin non-ribosomal peptide synthetase EntF;
Region: entF; PRK10252"
/db_xref="CDD:236668"
mobile_element 520755..521522
/mobile_element_type="insertion sequence:IS1"
gene 520810..521085
/gene="insA"
/locus_tag="SF0499"
/db_xref="GeneID:1023417"
CDS 520810..521085
/gene="insA"
/locus_tag="SF0499"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706442.1"
/db_xref="GeneID:1023417"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 520831..>521082
/gene="insA"
/locus_tag="SF0499"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 521112..521507
/gene="insB"
/locus_tag="SF0500"
/db_xref="GeneID:1023419"
CDS 521112..521507
/gene="insB"
/locus_tag="SF0500"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706443.1"
/db_xref="GeneID:1023419"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 521115..521504
/gene="insB"
/locus_tag="SF0500"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 521718..522851
/gene="fepE"
/locus_tag="SF0501"
/pseudo
/db_xref="GeneID:1023402"
misc_feature 521718..522851
/gene="fepE"
/locus_tag="SF0501"
/note="Similar to Escherichia coli K12 ferric enterobactin
(enterochelin) transport gi: 1786802 (378 aa). BLAST with
identity of 97% in 378 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(522848..523663)
/gene="fepC"
/locus_tag="SF0502"
/db_xref="GeneID:1023450"
CDS complement(522848..523663)
/gene="fepC"
/locus_tag="SF0502"
/note="Code: PH; COG: COG1120"
/codon_start=1
/transl_table=11
/product="iron-enterobactin ABC transporter ATP-binding
protein"
/protein_id="NP_706444.1"
/db_xref="GeneID:1023450"
/translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC
GKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELV
ARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR
EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGMPLVVPLGRTAPSTANS"
misc_feature complement(522869..523663)
/gene="fepC"
/locus_tag="SF0502"
/note="iron-enterobactin ABC transporter ATP-binding
protein; Region: PRK10253"
/db_xref="CDD:182336"
gene complement(523660..524652)
/gene="fepG"
/locus_tag="SF0503"
/db_xref="GeneID:1023386"
CDS complement(523660..524652)
/gene="fepG"
/locus_tag="SF0503"
/note="Code: PH; COG: COG0609"
/codon_start=1
/transl_table=11
/product="iron-enterobactin ABC transporter permease"
/protein_id="NP_706445.1"
/db_xref="GeneID:1023386"
/translation="MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLEISQVFAALM
GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
GVLVAMVLFGQDLTAIALAAMVGGIITSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAATLLVRRMRLLE
MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW
GLTQAALCGALLLLAAVLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
misc_feature complement(523663..524652)
/gene="fepG"
/locus_tag="SF0503"
/note="iron-enterobactin ABC transporter permease; Region:
PRK10440"
/db_xref="CDD:182463"
misc_feature complement(order(523828..523830,523849..523851,
523972..523980,523984..524001,524005..524010,
524014..524022,524026..524031,524392..524400,
524410..524412))
/gene="fepG"
/locus_tag="SF0503"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119348"
misc_feature complement(order(523684..523686,523693..523698,
523705..523707,523714..523719,523726..523728,
523879..523881,524107..524109,524116..524121,
524155..524157,524161..524166,524173..524175,
524182..524187,524194..524199,524206..524211,
524215..524217,524374..524376,524389..524391,
524395..524397))
/gene="fepG"
/locus_tag="SF0503"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(523735..523737,523759..523761,
523891..523893,523903..523905,524077..524079,
524155..524157))
/gene="fepG"
/locus_tag="SF0503"
/note="putative PBP binding regions [active]"
/db_xref="CDD:119348"
gene complement(524649..525665)
/gene="fepD"
/locus_tag="SF0504"
/db_xref="GeneID:1023404"
CDS complement(524649..525665)
/gene="fepD"
/locus_tag="SF0504"
/note="Code: PH; COG: COG0609"
/codon_start=1
/transl_table=11
/product="iron-enterobactin ABC transporter permease"
/protein_id="NP_706446.1"
/db_xref="GeneID:1023404"
/translation="MEVRISGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVV
LEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVN
AGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGV
ALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLS
RALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARW
LVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKT
RGGA"
misc_feature complement(524652..525650)
/gene="fepD"
/locus_tag="SF0504"
/note="Fe(3+)-siderophore ABC transporter permease;
Region: PRK10441"
/db_xref="CDD:182464"
misc_feature complement(order(524820..524822,524841..524843,
524964..524972,524976..524993,524997..525002,
525006..525014,525018..525023,525390..525398,
525408..525410))
/gene="fepD"
/locus_tag="SF0504"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119348"
misc_feature complement(order(524676..524678,524685..524690,
524697..524699,524706..524711,524718..524720,
524871..524873,525099..525101,525108..525113,
525144..525146,525150..525155,525162..525164,
525171..525176,525183..525188,525195..525200,
525204..525206,525372..525374,525387..525389,
525393..525395))
/gene="fepD"
/locus_tag="SF0504"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature complement(order(524727..524729,524751..524753,
524883..524885,524895..524897,525069..525071,
525144..525146))
/gene="fepD"
/locus_tag="SF0504"
/note="putative PBP binding regions [active]"
/db_xref="CDD:119348"
gene 525764..526996
/gene="ybdA"
/locus_tag="SF0505"
/db_xref="GeneID:1023447"
CDS 525764..526996
/gene="ybdA"
/locus_tag="SF0505"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="enterobactin exporter EntS"
/protein_id="NP_706447.1"
/db_xref="GeneID:1023447"
/translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
QMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN
ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATSALVGRENLMQAGAITMLTVRLGSV
ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPELPPPPQPLEHPLKSLLAGFR
FLLASPLLGGLLTMASAVLVLYPALADNWQMSAAQIGFLYAAIPLGAAIGALTSGKLA
HSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYTMLQTQT
PEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL
VELRRFRQTPPQVTASDS"
misc_feature 525764..526993
/gene="ybdA"
/locus_tag="SF0505"
/note="enterobactin transporter EntS; Region: PRK10489"
/db_xref="CDD:236700"
gene complement(527000..527956)
/gene="fepB"
/locus_tag="SF0506"
/db_xref="GeneID:1023366"
CDS complement(527000..527956)
/gene="fepB"
/locus_tag="SF0506"
/note="Code: P; COG: COG0614"
/codon_start=1
/transl_table=11
/product="iron-enterobactin ABC transporter
substrate-binding protein"
/protein_id="NP_706448.1"
/db_xref="GeneID:1023366"
/translation="MRLAPLYRNALLLTGLLLSGIAVVQAADWPRQITDSRGTHTLES
QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
LEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIY
ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF"
misc_feature complement(527003..527893)
/gene="fepB"
/locus_tag="SF0506"
/note="iron-enterobactin transporter periplasmic binding
protein; Provisional; Region: PRK10957"
/db_xref="CDD:236806"
gene 528248..529423
/gene="entC"
/locus_tag="SF0507"
/pseudo
/db_xref="GeneID:1023391"
misc_feature 528248..529423
/gene="entC"
/locus_tag="SF0507"
/note="'Similar to Escherichia coli K12 isochorismate
hydroxymutase 2, enterochelin biosynthesis gi: 1786809
(392 aa). BLAST with identity of 97% in 392 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct.'"
/pseudo
gene 529433..531043
/gene="entE"
/locus_tag="SF0508"
/db_xref="GeneID:1023457"
CDS 529433..531043
/gene="entE"
/locus_tag="SF0508"
/note="Code: Q; COG: COG1021"
/codon_start=1
/transl_table=11
/product="2,3-dihydroxybenzoate-AMP ligase"
/protein_id="NP_706449.1"
/db_xref="GeneID:1023457"
/translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID
GERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVAEHSSIRVVQLHNDSGE
HNLQDAINHPAEGFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSAEIC
QFTQQTRYLCSIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIAKHQVNVT
ALVPPAVSLWLQALAEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM
AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR
GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEDIENL
LLSHPAVIYAALVSMENELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE
CVDSLPLTAVGKVDKKQLRQWLASRASA"
misc_feature 529433..531040
/gene="entE"
/locus_tag="SF0508"
/note="(2,3-dihydroxybenzoyl)adenylate synthase; Region:
entE; PRK10946"
/db_xref="CDD:236803"
gene 531057..531914
/gene="entB"
/locus_tag="SF0509"
/db_xref="GeneID:1027539"
CDS 531057..531914
/gene="entB"
/locus_tag="SF0509"
/note="Code: Q; COG: COG1535"
/codon_start=1
/transl_table=11
/product="2,3-dihydro-2,3-dihydroxybenzoate synthetase"
/protein_id="NP_706450.1"
/db_xref="GeneID:1027539"
/translation="MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVS
FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT
ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPIPASKAAL
REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW
WKLLSREVK"
misc_feature 531060..531668
/gene="entB"
/locus_tag="SF0509"
/note="Isochorismatase, also known as 2,3 dihydro-2,3
dihydroxybenzoate synthase, catalyses the conversion of
isochorismate, in the presence of water, to
2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of
a vinyl ether, an uncommon reaction in biological...;
Region: isochorismatase; cd01013"
/db_xref="CDD:238495"
misc_feature order(531063..531065,531180..531182,531339..531341,
531432..531434,531510..531512,531519..531521,
531597..531599)
/gene="entB"
/locus_tag="SF0509"
/note="hydrophobic substrate binding pocket [active]"
/db_xref="CDD:238495"
misc_feature order(531165..531167,531291..531293,531318..531320,
531423..531425,531510..531512,531522..531524)
/gene="entB"
/locus_tag="SF0509"
/note="active site"
/db_xref="CDD:238495"
misc_feature 531507..531512
/gene="entB"
/locus_tag="SF0509"
/note="conserved cis-peptide bond [active]"
/db_xref="CDD:238495"
misc_feature 531702..531881
/gene="entB"
/locus_tag="SF0509"
/note="Phosphopantetheine attachment site; Region:
PP-binding; pfam00550"
/db_xref="CDD:425746"
gene 531914..532660
/gene="entA"
/locus_tag="SF0510"
/db_xref="GeneID:1023437"
CDS 531914..532660
/gene="entA"
/locus_tag="SF0510"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase"
/protein_id="NP_706451.2"
/db_xref="GeneID:1023437"
/translation="MDFSGKNVWVTGAGKGIGYATALTFVEAGAKVTGFDQAFTQEQY
PFATEVMDVADAGQVAQVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAV
NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTARIGMSAYGASKAALKSLALSVGL
ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
ANTILFLASDLASHITLQDIVVDGGSTLGA"
misc_feature 531914..532657
/gene="entA"
/locus_tag="SF0510"
/note="2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated;
Region: PRK08220"
/db_xref="CDD:236190"
gene 532663..533076
/gene="ybdB"
/locus_tag="SF0511"
/db_xref="GeneID:1023439"
CDS 532663..533076
/gene="ybdB"
/locus_tag="SF0511"
/note="Code: Q; COG: COG2050"
/codon_start=1
/transl_table=11
/product="thioesterase"
/protein_id="NP_706452.1"
/db_xref="GeneID:1023439"
/translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTLLGDDVLEAEMPVDT
RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
misc_feature 532663..533073
/gene="ybdB"
/locus_tag="SF0511"
/note="proofreading thioesterase EntH; Region: PRK10254"
/db_xref="CDD:182337"
misc_feature order(532819..532821,532906..532908,532927..532938)
/gene="ybdB"
/locus_tag="SF0511"
/note="CoenzymeA binding site [chemical binding]; other
site"
/db_xref="CDD:239527"
misc_feature order(532822..532824,532828..532830,532837..532839,
532909..532923,532927..532929)
/gene="ybdB"
/locus_tag="SF0511"
/note="subunit interaction site [polypeptide binding];
other site"
/db_xref="CDD:239527"
misc_feature order(532825..532827,532849..532854,532861..532866,
532906..532908)
/gene="ybdB"
/locus_tag="SF0511"
/note="PHB binding site [active]"
/db_xref="CDD:239527"
gene 533257..535362
/gene="cstA"
/locus_tag="SF0512"
/db_xref="GeneID:1023458"
CDS 533257..535362
/gene="cstA"
/locus_tag="SF0512"
/note="Code: T; COG: COG1966"
/codon_start=1
/transl_table=11
/product="carbon starvation protein A"
/protein_id="NP_706453.1"
/db_xref="GeneID:1023458"
/translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI
YLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG
VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRI
GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA
CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
LKRTDSLPANLLATALCVLAWGYFLHQSVVDPLGGINTLWPLFGIANQMLAGMALMLC
AVVLFKMKRQRYAWVALVPTAWLLICTLTADWLKAFSPDAKVGFLVIANKFQAMIDSG
NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP
YEPMPENVEEIVAQAKGAH"
misc_feature 533257..535359
/gene="cstA"
/locus_tag="SF0512"
/note="carbon starvation protein CstA; Region: PRK15015"
/db_xref="CDD:184976"
gene 535544..535741
/locus_tag="SF0513"
/db_xref="GeneID:1023461"
CDS 535544..535741
/locus_tag="SF0513"
/note="Code: S; COG: COG2879"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706454.1"
/db_xref="GeneID:1023461"
/translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
EEFFRERQDARYGGKGGARCC"
misc_feature 535544..535738
/locus_tag="SF0513"
/note="Uncharacterized short protein YbdD, DUF466 family
[Function unknown]; Region: YbdD; COG2879"
/db_xref="CDD:442126"
gene complement(535751..536839)
/gene="ybdH"
/locus_tag="SF0514"
/db_xref="GeneID:1026052"
CDS complement(535751..536839)
/gene="ybdH"
/locus_tag="SF0514"
/note="Code: C; COG: COG0371"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_706455.1"
/db_xref="GeneID:1026052"
/translation="MPHNPIRVVVGPANYFSHPGSFNHLHNFFTDEQLSRAVWIYGKR
AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
KALARRLGLPFVAAPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALA
DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP
VESIHYLPVTLTPDTLRAAFEKVESFKA"
misc_feature complement(535754..536839)
/gene="ybdH"
/locus_tag="SF0514"
/note="putative oxidoreductase; Provisional; Region:
PRK10586"
/db_xref="CDD:182570"
misc_feature complement(order(536018..536020,536057..536059,
536069..536071,536309..536311,536321..536323,
536342..536344,536366..536368,536417..536422,
536477..536479,536483..536488,536531..536533,
536540..536542,536549..536557,536714..536716))
/gene="ybdH"
/locus_tag="SF0514"
/note="putative active site [active]"
/db_xref="CDD:341451"
misc_feature complement(order(536018..536020,536366..536368,
536471..536473,536477..536479,536483..536488,
536549..536557,536714..536716))
/gene="ybdH"
/locus_tag="SF0514"
/note="putative NAD binding site [chemical binding]; other
site"
/db_xref="CDD:341451"
misc_feature complement(order(536018..536020,536069..536071,
536321..536323))
/gene="ybdH"
/locus_tag="SF0514"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:341451"
gene 536948..538108
/gene="ybdL"
/locus_tag="SF0515"
/db_xref="GeneID:1023420"
CDS 536948..538108
/gene="ybdL"
/locus_tag="SF0515"
/note="Code: E; COG: COG0436"
/codon_start=1
/transl_table=11
/product="methionine aminotransferase"
/protein_id="NP_706456.1"
/db_xref="GeneID:1023420"
/translation="MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDG
PRYLQERLAYHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATE
ALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALL
SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASV
LAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLA
LADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDD
VEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL"
misc_feature 536948..538105
/gene="ybdL"
/locus_tag="SF0515"
/note="methionine aminotransferase; Validated; Region:
PRK09082"
/db_xref="CDD:181642"
misc_feature complement(538109..539990)
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1786817 (210 aa). BLAST with
identity of 99% in 627 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
mobile_element complement(538620..539868)
/mobile_element_type="insertion sequence:IS911"
gene complement(538628..539467)
/locus_tag="SF0516"
/db_xref="GeneID:1023432"
CDS complement(538628..539467)
/locus_tag="SF0516"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_706457.1"
/db_xref="GeneID:1023432"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(538637..539446)
/locus_tag="SF0516"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(539494..539832)
/locus_tag="SF0517"
/db_xref="GeneID:1023451"
CDS complement(539494..539832)
/locus_tag="SF0517"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_706458.1"
/db_xref="GeneID:1023451"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(539524..539793)
/locus_tag="SF0517"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
misc_feature complement(539963..542415)
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1786818 (407 aa). BLAST with
identity of 98% in 817 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
gene complement(539963..540940)
/locus_tag="SF0517a"
/pseudogene="unknown"
/db_xref="GeneID:16608306"
gene 541040..541324
/locus_tag="SF0519"
/db_xref="GeneID:1023453"
CDS 541040..541324
/locus_tag="SF0519"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706459.1"
/db_xref="GeneID:1023453"
/translation="MPMSGKRYPEEFKTEAVKQVVDRGYSVASVATRLDITTHSLYAW
IKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAAYFAKLSD"
misc_feature 541040..541306
/locus_tag="SF0519"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 541381..542193
/locus_tag="SF0520"
/db_xref="GeneID:1023455"
CDS 541381..542193
/locus_tag="SF0520"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706460.1"
/db_xref="GeneID:1023455"
/translation="MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGY
RKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNP
DAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRER
IKKKIYGTREEARSDIFDYIEMFYNSKRRHGSSEQMSPTEYENQYYQRLGSV"
misc_feature <541384..542160
/locus_tag="SF0520"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(542562..543464)
/locus_tag="SF0522"
/db_xref="GeneID:1026058"
CDS complement(542562..543464)
/locus_tag="SF0522"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_706461.1"
/db_xref="GeneID:1026058"
/translation="MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQS
LQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLKGLEQTINIVNKSELKKNFII
YGPQLISCSNNSMLIRCLRQDASVEIECHDILMSAENAEELLVHRKADLVITQMPVIS
RSVICMPLHTIRNTLICSNKHPRITDNSTYEQIMAEEFTQLIAKSAGVDDIQMEIDEK
FMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNYHRDFLNLKEIKLEHPLPSIKLY
ISYNKSSLNNLVFSRFIDRLNESF"
misc_feature complement(542565..543446)
/locus_tag="SF0522"
/note="DNA-binding transcriptional regulator; Region:
PRK11482"
/db_xref="CDD:183159"
gene complement(543674..544480)
/gene="dsbG"
/locus_tag="SF0523"
/db_xref="GeneID:1023465"
CDS complement(543674..544480)
/gene="dsbG"
/locus_tag="SF0523"
/note="Code: O; COG: COG1651"
/codon_start=1
/transl_table=11
/product="thiol:disulfide interchange protein"
/protein_id="NP_706462.3"
/db_xref="GeneID:1023465"
/translation="MTVIGYAFYSTFALTEKNKLMLKKILLLALLPAIAFAEELPSPV
KAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSN
TLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFSDPFCPYCKQFWQQARPWV
DSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGCKLKLNVPANVSTEQ
MKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNK"
misc_feature complement(543677..544387)
/gene="dsbG"
/locus_tag="SF0523"
/note="disulfide isomerase/thiol-disulfide oxidase;
Provisional; Region: dsbG; PRK11657"
/db_xref="CDD:183262"
gene 544792..545355
/gene="ahpC"
/locus_tag="SF0524"
/db_xref="GeneID:1023440"
CDS 544792..545355
/gene="ahpC"
/locus_tag="SF0524"
/note="Code: O; COG: COG0450"
/codon_start=1
/transl_table=11
/product="alkyl hydroperoxide reductase"
/protein_id="NP_706463.1"
/db_xref="GeneID:1023440"
/translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
HPGEVCPAKWKEGEATLAPSLDLVGKI"
misc_feature 544792..545352
/gene="ahpC"
/locus_tag="SF0524"
/note="alkyl hydroperoxide reductase subunit C;
Provisional; Region: PRK10382"
/db_xref="CDD:182423"
gene 545570..547165
/gene="ahpF"
/locus_tag="SF0525"
/db_xref="GeneID:1023431"
CDS 545570..547165
/gene="ahpF"
/locus_tag="SF0525"
/note="Code: O; COG: COG3634"
/codon_start=1
/transl_table=11
/product="alkyl hydroperoxide reductase"
/protein_id="NP_706464.1"
/db_xref="GeneID:1023431"
/translation="MMMFKAQEINMLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSA
EIKELLAEIAELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVL
ALLWTGGHPSKEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIK
HTAIDGGTFQNEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAENRAAEELN
KRDAYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEG
QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGA
KWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVT
LLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGNIHNI
ELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQII
IATGEGAKASLSAFDYLIRTKTA"
misc_feature 545600..547162
/gene="ahpF"
/locus_tag="SF0525"
/note="alkyl hydroperoxide reductase subunit F;
Provisional; Region: PRK15317"
/db_xref="CDD:237942"
gene complement(547286..547714)
/gene="ybdQ"
/locus_tag="SF0526"
/db_xref="GeneID:1023423"
CDS complement(547286..547714)
/gene="ybdQ"
/locus_tag="SF0526"
/note="Code: T; COG: COG0589"
/codon_start=1
/transl_table=11
/product="universal stress protein UspG"
/protein_id="NP_706465.1"
/db_xref="GeneID:1023423"
/translation="MYKAIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSA
SLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
misc_feature complement(547289..547714)
/gene="ybdQ"
/locus_tag="SF0526"
/note="universal stress protein UspG; Provisional; Region:
PRK15456"
/db_xref="CDD:185353"
gene 547935..549173
/gene="ybdR"
/locus_tag="SF0527"
/db_xref="GeneID:1023430"
CDS 547935..549173
/gene="ybdR"
/locus_tag="SF0527"
/note="Code: ER; COG: COG1063"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_706466.1"
/db_xref="GeneID:1023430"
/translation="MKALTYHGPHHVQVENVPDPGIEQADDIILRITVTAICGSDLHL
YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRLQQYA
ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL
SDDKALFLSDILPTAWQAAKNVQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD
HHPYRLRFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTET
VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT
HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQS
AEAAQKAVSGLVNAMPGGTI"
misc_feature 547935..549098
/gene="ybdR"
/locus_tag="SF0527"
/note="Glutathione-dependent formaldehyde dehydrogenase
related proteins, child 1; Region: FDH_like_1; cd08283"
/db_xref="CDD:176243"
misc_feature order(548046..548054,548061..548063,548190..548192,
548442..548444,548454..548456,548511..548516,
548520..548528,548583..548591,548601..548603,
548646..548648,548724..548732,548802..548804,
548853..548861,548928..548936,549054..549056)
/gene="ybdR"
/locus_tag="SF0527"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:176243"
misc_feature order(548046..548048,548052..548054,548112..548114,
548442..548444)
/gene="ybdR"
/locus_tag="SF0527"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176243"
misc_feature order(548202..548207,548211..548213,548220..548222,
548244..548246)
/gene="ybdR"
/locus_tag="SF0527"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176243"
gene complement(549404..549814)
/gene="rnk"
/locus_tag="SF0528"
/db_xref="GeneID:1023415"
CDS complement(549404..549814)
/gene="rnk"
/locus_tag="SF0528"
/note="Code: K; COG: COG0782"
/codon_start=1
/transl_table=11
/product="nucleoside diphosphate kinase regulator"
/protein_id="NP_706467.1"
/db_xref="GeneID:1023415"
/translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL"
misc_feature complement(549407..549814)
/gene="rnk"
/locus_tag="SF0528"
/note="nucleoside diphosphate kinase regulator;
Provisional; Region: PRK05753"
/db_xref="CDD:180236"
gene complement(550043..550867)
/gene="rna"
/locus_tag="SF0529"
/db_xref="GeneID:1023476"
CDS complement(550043..550867)
/gene="rna"
/locus_tag="SF0529"
/codon_start=1
/transl_table=11
/product="ribonuclease I"
/protein_id="NP_706468.1"
/db_xref="GeneID:1023476"
/translation="MSSTPIMKAFCRNAALLAVSLLPLSSANAVALQAKQYGDFDRYV
LALSWQTGFCQSQHDRNRNERDECRLQTETTNKTDFLTVHGLWPGLPKSVAARGVDER
RWMRFGCATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYA
KHGACFGFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKEN
VKAVKLTCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKAGY"
misc_feature complement(550046..550849)
/gene="rna"
/locus_tag="SF0529"
/note="ribonuclease I; Provisional; Region: PRK10095"
/db_xref="CDD:236650"
misc_feature complement(order(550157..550159,550607..550609,
550736..550738))
/gene="rna"
/locus_tag="SF0529"
/note="B1 nucleotide binding pocket [chemical binding];
other site"
/db_xref="CDD:238513"
misc_feature complement(order(550163..550165,550406..550408,
550709..550711,550724..550726))
/gene="rna"
/locus_tag="SF0529"
/note="B2 nucleotide binding pocket [chemical binding];
other site"
/db_xref="CDD:238513"
misc_feature complement(order(550373..550408,550604..550627))
/gene="rna"
/locus_tag="SF0529"
/note="CAS motifs [active]"
/db_xref="CDD:238513"
misc_feature complement(order(550382..550387,550394..550399,
550601..550603,550607..550609,550616..550618))
/gene="rna"
/locus_tag="SF0529"
/note="active site"
/db_xref="CDD:238513"
gene complement(550963..552425)
/gene="ybdS"
/locus_tag="SF0530"
/pseudo
/db_xref="GeneID:1023426"
misc_feature complement(550963..552425)
/gene="ybdS"
/locus_tag="SF0530"
/note="Similar to Escherichia coli K12 a membrane protein
gi: 1786829 (488 aa). BLAST with identity of 99% in 487
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene complement(552476..553354)
/locus_tag="SF0531a"
/db_xref="GeneID:16608307"
CDS complement(552476..553354)
/locus_tag="SF0531a"
/codon_start=1
/transl_table=11
/product="2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A
synthase"
/protein_id="YP_008439231.1"
/db_xref="GeneID:16608307"
/translation="MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDR
INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM
FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTN
NSRLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL
LMATNGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPTDLDYLRQFDRECIERNLSP
GGSADLLILTCFLAQI"
misc_feature complement(552479..553354)
/locus_tag="SF0531a"
/note="triphosphoribosyl-dephospho-CoA synthase;
Provisional; Region: citG; PRK10096"
/db_xref="CDD:182239"
gene complement(553329..553879)
/gene="ybdU"
/locus_tag="SF0531"
/pseudo
/db_xref="GeneID:1023427"
misc_feature complement(553329..553879)
/gene="ybdU"
/locus_tag="SF0531"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1786831 (184 aa). BLAST with
identity of 98% in 183 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(553883..555415)
/gene="citF"
/locus_tag="SF0532"
/db_xref="GeneID:1023421"
CDS complement(553883..555415)
/gene="citF"
/locus_tag="SF0532"
/note="Code: C; COG: COG3051"
/codon_start=1
/transl_table=11
/product="citrate lyase subunit alpha"
/protein_id="NP_706469.1"
/db_xref="GeneID:1023421"
/translation="MTQKIEQSQRQERVAAWNRRTECDLAAFQNSPKQTYQAEKARDR
KLCANLEEAIRRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD
CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI
DVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASI
EQDQVDLIVKVNRVGDAAKIGAGTTRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT
GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA
QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDRQFNVNVLTGSDGVLRG
ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR
PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV
KE"
misc_feature complement(553886..555337)
/gene="citF"
/locus_tag="SF0532"
/note="Citrate lyase, alpha subunit [Energy production and
conversion]; Region: CitF; COG3051"
/db_xref="CDD:442285"
gene complement(555426..556334)
/gene="citE"
/locus_tag="SF0533"
/db_xref="GeneID:1023466"
CDS complement(555426..556334)
/gene="citE"
/locus_tag="SF0533"
/note="Code: G; COG: COG2301"
/codon_start=1
/transl_table=11
/product="citrate lyase subunit beta"
/protein_id="NP_706470.2"
/db_xref="GeneID:1023466"
/translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHAHRVVEAAEAAAREGLGVVSLNG
KMVDGPVIDRARLVLSRAELSGIREE"
misc_feature complement(555438..556301)
/gene="citE"
/locus_tag="SF0533"
/note="Malate synthase catalyzes the Claisen condensation
of glyoxylate and acetyl-CoA to malyl-CoA, which
hydrolyzes to malate and CoA. This reaction is part of the
glyoxylate cycle, which allows certain organisms, like
plants and fungi, to derive their...; Region: malate_synt;
cl21481"
/db_xref="CDD:451263"
gene complement(556331..556627)
/gene="citD"
/locus_tag="SF0534"
/db_xref="GeneID:1023433"
CDS complement(556331..556627)
/gene="citD"
/locus_tag="SF0534"
/note="Code: C; COG: COG3052"
/codon_start=1
/transl_table=11
/product="citrate lyase subunit gamma"
/protein_id="NP_706471.2"
/db_xref="GeneID:1023433"
/translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
IRTTILDVLARYNVRGVQLNVDDKGALDCILHARLEALLARASGIPALPWEDCQ"
misc_feature complement(556352..556627)
/gene="citD"
/locus_tag="SF0534"
/note="citrate lyase subunit gamma; Provisional; Region:
PRK13253"
/db_xref="CDD:237316"
gene complement(556642..557787)
/gene="citC"
/locus_tag="SF0535"
/db_xref="GeneID:1023474"
CDS complement(556642..557787)
/gene="citC"
/locus_tag="SF0535"
/note="Code: C; COG: COG3053"
/codon_start=1
/transl_table=11
/product="[citrate (pro-3S)-lyase] ligase"
/protein_id="NP_706472.2"
/db_xref="GeneID:1023474"
/translation="MKIKGYQFATLNNIRCKSITTCTFRILFIMFGNDIFTRVKRSEN
KKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGL
ALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTCVPGVMVLMENSATRLK
RYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPY
EDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQY
LAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAAPIELVEIERLRYQEMPIS
ASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA"
misc_feature complement(556684..557682)
/gene="citC"
/locus_tag="SF0535"
/note="[citrate (pro-3S)-lyase] ligase; Region:
cit_ly_ligase; TIGR00124"
/db_xref="CDD:129230"
misc_feature complement(order(556771..556773,556780..556791,
556915..556917,556921..556926,557158..557163,
557218..557220,557227..557229,557239..557253))
/gene="citC"
/locus_tag="SF0535"
/note="putative active site [active]"
/db_xref="CDD:173920"
misc_feature complement(557218..557229)
/gene="citC"
/locus_tag="SF0535"
/note="(T/H)XGH motif; other site"
/db_xref="CDD:173920"
mobile_element complement(558151..558918)
/mobile_element_type="insertion sequence:IS1"
gene complement(558166..558669)
/gene="insB"
/locus_tag="SF0536"
/db_xref="GeneID:1023477"
CDS complement(558166..558669)
/gene="insB"
/locus_tag="SF0536"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706473.1"
/db_xref="GeneID:1023477"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARPVRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature complement(558169..558561)
/gene="insB"
/locus_tag="SF0536"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 559732..560550
/gene="ybhA"
/locus_tag="SF0538"
/db_xref="GeneID:1023470"
CDS 559732..560550
/gene="ybhA"
/locus_tag="SF0538"
/note="Code: R; COG: COG0561"
/codon_start=1
/transl_table=11
/product="pyridoxal phosphate (PLP) phosphatase"
/protein_id="NP_706475.2"
/db_xref="GeneID:1023470"
/translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG
RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHI
HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETTQQVNAVWKFAL
THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIAHGGNSKGKRLTKWVEAQGWSMENV
VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
misc_feature 559732..560547
/gene="ybhA"
/locus_tag="SF0538"
/note="pyridoxal phosphate (PLP) phosphatase; Provisional;
Region: PRK10530"
/db_xref="CDD:182523"
gene complement(560551..561609)
/gene="modC"
/locus_tag="SF0539"
/db_xref="GeneID:1023472"
CDS complement(560551..561609)
/gene="modC"
/locus_tag="SF0539"
/note="Code: P; COG: COG1118"
/codon_start=1
/transl_table=11
/product="molybdate transporter ATP-binding protein"
/protein_id="NP_706476.1"
/db_xref="GeneID:1023472"
/translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMS
KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLGEPLQAALRIRIQ
ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA
IKPGLWLYAQIKSVSITA"
misc_feature complement(560554..561609)
/gene="modC"
/locus_tag="SF0539"
/note="molybdenum ABC transporter ATP-binding protein
ModC; Region: modC; PRK11144"
/db_xref="CDD:182993"
gene complement(561612..562301)
/gene="modB"
/locus_tag="SF0540"
/db_xref="GeneID:1023484"
CDS complement(561612..562301)
/gene="modB"
/locus_tag="SF0540"
/note="Code: P; COG: COG0555"
/codon_start=1
/transl_table=11
/product="molybdate ABC transporter permease"
/protein_id="NP_706477.1"
/db_xref="GeneID:1023484"
/translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS
LGEFGATITFVSNIPSETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
LARISRERAGR"
misc_feature complement(561618..562301)
/gene="modB"
/locus_tag="SF0540"
/note="molybdate ABC transporter permease subunit; Region:
modB; PRK09421"
/db_xref="CDD:181841"
misc_feature complement(order(561753..561758,561795..561800,
561807..561818,561837..561839,561846..561851,
561891..561893,561942..561944,561951..561956,
561966..561968,561972..561977,561984..561986,
561990..561992,561996..562001,562101..562103,
562107..562112,562119..562148,562152..562163,
562191..562193,562206..562211,562218..562223))
/gene="modB"
/locus_tag="SF0540"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(561801..561818,562101..562145))
/gene="modB"
/locus_tag="SF0540"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(561753..561755,561762..561764,
561798..561800,562014..562016,562101..562103))
/gene="modB"
/locus_tag="SF0540"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(561870..561872,561882..561887,
561903..561941))
/gene="modB"
/locus_tag="SF0540"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(562301..563074)
/gene="modA"
/locus_tag="SF0541"
/db_xref="GeneID:1025459"
CDS complement(562301..563074)
/gene="modA"
/locus_tag="SF0541"
/note="Code: P; COG: COG0725"
/codon_start=1
/transl_table=11
/product="molybdate transporter substrate-binding protein"
/protein_id="NP_706478.1"
/db_xref="GeneID:1025459"
/translation="MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDI
ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQ
TLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKV
EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
misc_feature complement(562304..563074)
/gene="modA"
/locus_tag="SF0541"
/note="molybdate transporter periplasmic protein;
Provisional; Region: modA; PRK10677"
/db_xref="CDD:182641"
misc_feature complement(order(562493..562495,562547..562552,
562628..562633,562829..562831,562886..562888,
562970..562975))
/gene="modA"
/locus_tag="SF0541"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270254"
gene complement(563241..563390)
/locus_tag="SF0542"
/db_xref="GeneID:1023485"
CDS complement(563241..563390)
/locus_tag="SF0542"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706479.2"
/db_xref="GeneID:1023485"
/translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
PGQNH"
misc_feature complement(563247..563390)
/locus_tag="SF0542"
/note="Multidrug efflux pump-associated protein AcrZ;
Region: AcrZ; pfam10766"
/db_xref="CDD:431482"
gene 563519..564307
/gene="modE"
/locus_tag="SF0543"
/db_xref="GeneID:1023462"
CDS 563519..564307
/gene="modE"
/locus_tag="SF0543"
/note="Code: R; COG: COG2005"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator ModE"
/protein_id="NP_706480.1"
/db_xref="GeneID:1023462"
/translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCE
VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
misc_feature 563519..564304
/gene="modE"
/locus_tag="SF0543"
/note="DNA-binding transcriptional regulator ModE;
Provisional; Region: PRK10676"
/db_xref="CDD:182640"
gene 564375..565847
/gene="modF"
/locus_tag="SF0544"
/db_xref="GeneID:1023487"
CDS 564375..565847
/gene="modF"
/locus_tag="SF0544"
/note="Code: P; COG: COG1119"
/codon_start=1
/transl_table=11
/product="molybdenum transport ATP-binding protein ModF"
/protein_id="NP_706481.1"
/db_xref="GeneID:1023487"
/translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPSEDYTGRTT
AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILD
EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDKIPEFVQFAGVLADCTLAETGA
KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANESRIVLNNGVVSYNDRPIL
NNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSSETIWDI
KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQVVSDRQQKLVQQWLDILGIDK
HTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE
GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY"
misc_feature 564375..565841
/gene="modF"
/locus_tag="SF0544"
/note="putative molybdenum transport ATP-binding protein
ModF; Provisional; Region: PRK10938"
/db_xref="CDD:182852"
gene 566108..567124
/gene="galE"
/locus_tag="SF0545"
/db_xref="GeneID:1023480"
CDS 566108..567124
/gene="galE"
/locus_tag="SF0545"
/note="Code: M; COG: COG1087"
/codon_start=1
/transl_table=11
/product="UDP-galactose-4-epimerase"
/protein_id="NP_706482.2"
/db_xref="GeneID:1023480"
/translation="MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVAESVQKPLEYYDNNVN
GTLRLISAMRAANVKNFIFSSSATVYGDQPQIPYVESFPTGTPQSPYGKSKLMVEQIL
TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGSSVLDVVNAF
SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
GYPD"
misc_feature 566108..567121
/gene="galE"
/locus_tag="SF0545"
/note="UDP-galactose-4-epimerase; Provisional; Region:
PRK10675"
/db_xref="CDD:182639"
misc_feature order(566126..566128,566132..566143,566198..566215,
566276..566284,566345..566353,566357..566359,
566402..566404,566471..566479,566552..566554,
566564..566566,566636..566641,566645..566647)
/gene="galE"
/locus_tag="SF0545"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187558"
misc_feature order(566375..566377,566381..566389,566396..566401,
566408..566413,566420..566425,566429..566434,
566441..566443,566549..566551,566558..566560,
566570..566572,566579..566584,566588..566596)
/gene="galE"
/locus_tag="SF0545"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187558"
misc_feature order(566405..566407,566477..566479,566552..566554,
566564..566566)
/gene="galE"
/locus_tag="SF0545"
/note="active site"
/db_xref="CDD:187558"
misc_feature order(566477..566485,566552..566554,566636..566644,
566699..566707,566750..566761,566792..566794,
566798..566800,566804..566806,566912..566914,
566981..566983,566990..566992)
/gene="galE"
/locus_tag="SF0545"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187558"
gene 567134..568180
/gene="galT"
/locus_tag="SF0546"
/db_xref="GeneID:1023446"
CDS 567134..568180
/gene="galT"
/locus_tag="SF0546"
/note="Code: C; COG: COG1085"
/codon_start=1
/transl_table=11
/product="galactose-1-phosphate uridylyltransferase"
/protein_id="NP_706483.1"
/db_xref="GeneID:1023446"
/translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
LPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESNDPLMRCQSA
RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
SNPHPHGQIWANSFLPNEAECEDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY
SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
LRAVSDIHFRESGV"
misc_feature 567134..568171
/gene="galT"
/locus_tag="SF0546"
/note="UDP-glucose--hexose-1-phosphate
uridylyltransferase; Region: PRK11720"
/db_xref="CDD:236963"
gene 568184..569332
/gene="galK"
/locus_tag="SF0547"
/db_xref="GeneID:1023445"
CDS 568184..569332
/gene="galK"
/locus_tag="SF0547"
/note="Code: G; COG: COG0153"
/codon_start=1
/transl_table=11
/product="galactokinase"
/protein_id="NP_706484.1"
/db_xref="GeneID:1023445"
/translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLNAPIVAHENYQWANYVRGVVKH
LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG
GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC"
misc_feature 568184..569329
/gene="galK"
/locus_tag="SF0547"
/note="galactokinase; Provisional; Region: PRK05101"
/db_xref="CDD:179937"
gene 569326..570366
/gene="galM"
/locus_tag="SF0548"
/db_xref="GeneID:1023468"
CDS 569326..570366
/gene="galM"
/locus_tag="SF0548"
/note="Code: G; COG: COG2017"
/codon_start=1
/transl_table=11
/product="galactose-1-epimerase"
/protein_id="NP_706485.1"
/db_xref="GeneID:1023468"
/translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY
RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
YSSLTEYQFIAE"
misc_feature 569344..570360
/gene="galM"
/locus_tag="SF0548"
/note="galactose-1-epimerase; Provisional; Region: galM;
PRK11055"
/db_xref="CDD:182931"
misc_feature order(569527..569529,569560..569562,569635..569637,
569848..569850,569854..569856,570058..570060,
570175..570177,570250..570252)
/gene="galM"
/locus_tag="SF0548"
/note="active site"
/db_xref="CDD:185696"
misc_feature order(569848..569850,570250..570252)
/gene="galM"
/locus_tag="SF0548"
/note="catalytic residues [active]"
/db_xref="CDD:185696"
gene 570569..571321
/gene="gpmA"
/locus_tag="SF0549"
/db_xref="GeneID:1023473"
CDS 570569..571321
/gene="gpmA"
/locus_tag="SF0549"
/note="Code: G; COG: COG0588"
/codon_start=1
/transl_table=11
/product="2,3-bisphosphoglycerate-dependent
phosphoglycerate mutase"
/protein_id="NP_706486.2"
/db_xref="GeneID:1023473"
/translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
misc_feature 570578..571318
/gene="gpmA"
/locus_tag="SF0549"
/note="2,3-diphosphoglycerate-dependent phosphoglycerate
mutase; Region: gpmA; PRK14115"
/db_xref="CDD:184516"
misc_feature order(570596..570601,570752..570754,571118..571123)
/gene="gpmA"
/locus_tag="SF0549"
/note="catalytic core [active]"
/db_xref="CDD:132718"
gene complement(571488..572540)
/gene="aroG"
/locus_tag="SF0550"
/db_xref="GeneID:1023478"
CDS complement(571488..572540)
/gene="aroG"
/locus_tag="SF0550"
/note="Code: E; COG: COG0722"
/codon_start=1
/transl_table=11
/product="3-deoxy-7-phosphoheptulonate synthase"
/protein_id="NP_706487.1"
/db_xref="GeneID:1023478"
/translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLDSGEPLAYGKSITDACIGWEDT
DALLRQLVNAVKARRG"
misc_feature complement(571491..572540)
/gene="aroG"
/locus_tag="SF0550"
/note="3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)
synthase [Amino acid transport and metabolism]; Region:
AroG1; COG0722"
/db_xref="CDD:440486"
gene 572856..573236
/locus_tag="SF0551"
/db_xref="GeneID:1027543"
CDS 572856..573236
/locus_tag="SF0551"
/codon_start=1
/transl_table=11
/product="homeobox protein"
/protein_id="NP_706488.1"
/db_xref="GeneID:1027543"
/translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQ
VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD
INKKVQTGDGINNDVDTKTDGTTQ"
misc_feature 572862..573233
/locus_tag="SF0551"
/note="YbgS-like protein; Region: YbgS; pfam13985"
/db_xref="CDD:464062"
gene 573350..574291
/gene="ybgR"
/locus_tag="SF0552"
/db_xref="GeneID:1023518"
CDS 573350..574291
/gene="ybgR"
/locus_tag="SF0552"
/note="Code: P; COG: COG1230"
/codon_start=1
/transl_table=11
/product="zinc transporter ZitB"
/protein_id="NP_706489.1"
/db_xref="GeneID:1023518"
/translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS
LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
LGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPV
SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYL
MDHYQIEHTTIQMEYQPCHRPDCHLNEGVSGHSHHHH"
misc_feature 573350..574285
/gene="ybgR"
/locus_tag="SF0552"
/note="CDF family zinc transporter ZitB; Region: PRK03557"
/db_xref="CDD:235130"
gene complement(574288..575007)
/gene="pnuC"
/locus_tag="SF0553"
/db_xref="GeneID:1023463"
CDS complement(574288..575007)
/gene="pnuC"
/locus_tag="SF0553"
/note="Code: H; COG: COG3201"
/codon_start=1
/transl_table=11
/product="nicotinamide riboside transporter PnuC"
/protein_id="NP_706490.1"
/db_xref="GeneID:1023463"
/translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
FWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
LNGSRMWINSARERGSRALSH"
misc_feature complement(574291..575007)
/gene="pnuC"
/locus_tag="SF0553"
/note="nicotinamide riboside transporter PnuC;
Provisional; Region: PRK15397"
/db_xref="CDD:185295"
gene complement(575045..576088)
/gene="nadA"
/locus_tag="SF0554"
/db_xref="GeneID:1023452"
CDS complement(575045..576088)
/gene="nadA"
/locus_tag="SF0554"
/note="Code: H; COG: COG0379"
/codon_start=1
/transl_table=11
/product="quinolinate synthetase"
/protein_id="NP_706491.1"
/db_xref="GeneID:1023452"
/translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM
VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK
TILMPTLQVECSLDLGCPVEEFNAFYDAHPDRTVVVYANTSAAVKARADWVVTSSIAV
ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY
PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKALPHQRLIVATDRGIFYKMQQAVPD
KELLEAPTAGEGATCRSCAHCPWMAMNDLQAIAEALEQEGSNHEVHVDERLRERALVP
LNRMLDFAATLRG"
misc_feature complement(575060..576064)
/gene="nadA"
/locus_tag="SF0554"
/note="quinolinate synthase NadA; Region: PRK09375"
/db_xref="CDD:236489"
gene complement(576337..576412)
/locus_tag="SF4445"
/db_xref="GeneID:3161789"
tRNA complement(576337..576412)
/locus_tag="SF4445"
/product="tRNA-Lys"
/codon_recognized="AAA"
/db_xref="GeneID:3161789"
gene complement(576416..576491)
/locus_tag="SF4446"
/db_xref="GeneID:3161788"
tRNA complement(576416..576491)
/locus_tag="SF4446"
/product="tRNA-Val"
/codon_recognized="GUA"
/db_xref="GeneID:3161788"
gene complement(576627..576702)
/locus_tag="SF4447"
/db_xref="GeneID:3161787"
tRNA complement(576627..576702)
/locus_tag="SF4447"
/product="tRNA-Lys"
/codon_recognized="AAA"
/db_xref="GeneID:3161787"
gene complement(576867..577658)
/gene="ybgF"
/locus_tag="SF0555"
/db_xref="GeneID:1023495"
CDS complement(576867..577658)
/gene="ybgF"
/locus_tag="SF0555"
/note="Code: S; COG: COG1729"
/codon_start=1
/transl_table=11
/product="tol-pal system protein YbgF"
/protein_id="NP_706492.1"
/db_xref="GeneID:1023495"
/translation="MSSNFRHQLLSLSLLVGIAAHWAAFAQAPISSVSSGSVEDRVTQ
LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
SGGAAAQSTSSDQSGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
misc_feature complement(576870..577658)
/gene="ybgF"
/locus_tag="SF0555"
/note="tol-pal system protein YbgF; Provisional; Region:
PRK10803"
/db_xref="CDD:182745"
misc_feature complement(order(576972..576974,576981..576986,
576993..576998,577014..577016,577083..577088,
577092..577097,577104..577109,577116..577118,
577200..577202,577206..577211,577218..577223))
/gene="ybgF"
/locus_tag="SF0555"
/note="putative protein binding surface [polypeptide
binding]; other site"
/db_xref="CDD:276809"
misc_feature complement(577146..577223)
/gene="ybgF"
/locus_tag="SF0555"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature complement(577032..577133)
/gene="ybgF"
/locus_tag="SF0555"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature complement(576924..577019)
/gene="ybgF"
/locus_tag="SF0555"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
gene complement(577668..578189)
/gene="pal"
/locus_tag="SF0556"
/db_xref="GeneID:1023464"
CDS complement(577668..578189)
/gene="pal"
/locus_tag="SF0556"
/note="Code: M; COG: COG2885"
/codon_start=1
/transl_table=11
/product="peptidoglycan-associated outer membrane
lipoprotein"
/protein_id="NP_706493.2"
/db_xref="GeneID:1023464"
/translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
AAYSKNRRAVLVY"
misc_feature complement(577671..578189)
/gene="pal"
/locus_tag="SF0556"
/note="peptidoglycan-associated lipoprotein Pal; Region:
PRK10802"
/db_xref="CDD:182744"
gene complement(578224..579516)
/gene="tolB"
/locus_tag="SF0557"
/db_xref="GeneID:1023467"
CDS complement(578224..579516)
/gene="tolB"
/locus_tag="SF0557"
/note="Code: N; COG: COG0823"
/codon_start=1
/transl_table=11
/product="translocation protein TolB"
/protein_id="NP_706494.2"
/db_xref="GeneID:1023467"
/translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVG
QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPHPLMSPAWSPDGSKLAYVT
FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDLAGRPQVYKVNINGGAPQRITWEGSQN
QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
misc_feature complement(578236..579480)
/gene="tolB"
/locus_tag="SF0557"
/note="tol-pal system beta propeller repeat protein TolB;
Region: propeller_TolB; TIGR02800"
/db_xref="CDD:274305"
gene complement(579649..580890)
/gene="tolA"
/locus_tag="SF0558"
/db_xref="GeneID:1023516"
CDS complement(579649..580890)
/gene="tolA"
/locus_tag="SF0558"
/note="Code: M; COG: COG3064"
/codon_start=1
/transl_table=11
/product="cell envelope integrity inner membrane protein
TolA"
/protein_id="NP_706495.1"
/db_xref="GeneID:1023516"
/translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEVAAAKAAADAKAAEEAAKKAAADAK
KKAEAEAAKAAAEAQKKAEVAAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKK
AAAEKAAADKKAAAEKAAADKKAAEKAAADKAAADKKAAAEKAAADKKAAAAKAAAEK
AAAAKAAAEADDIFGELSSGKNAPKTGGGAKGNNASPAGSGNTKNNGASGADINNYAG
QIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKI
PKPPSQAVYEVFKNAPLDFKP"
misc_feature complement(579652..580890)
/gene="tolA"
/locus_tag="SF0558"
/note="cell envelope integrity inner membrane protein
TolA; Provisional; Region: tolA; PRK09510"
/db_xref="CDD:236545"
gene complement(580955..581383)
/gene="tolR"
/locus_tag="SF0559"
/db_xref="GeneID:1023523"
CDS complement(580955..581383)
/gene="tolR"
/locus_tag="SF0559"
/note="Code: N; COG: COG0848"
/codon_start=1
/transl_table=11
/product="colicin uptake protein TolR"
/protein_id="NP_706496.1"
/db_xref="GeneID:1023523"
/translation="MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
misc_feature complement(580958..581353)
/gene="tolR"
/locus_tag="SF0559"
/note="colicin uptake protein TolR; Provisional; Region:
PRK11024"
/db_xref="CDD:236824"
gene complement(581387..582079)
/gene="tolQ"
/locus_tag="SF0560"
/db_xref="GeneID:1023502"
CDS complement(581387..582079)
/gene="tolQ"
/locus_tag="SF0560"
/note="Code: N; COG: COG0811"
/codon_start=1
/transl_table=11
/product="colicin uptake protein TolQ"
/protein_id="NP_706497.1"
/db_xref="GeneID:1023502"
/translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
RQAFTVSESNKG"
misc_feature complement(581390..582070)
/gene="tolQ"
/locus_tag="SF0560"
/note="Tol-Pal system protein TolQ; Region: PRK10801"
/db_xref="CDD:182743"
gene complement(582076..582480)
/gene="ybgC"
/locus_tag="SF0561"
/db_xref="GeneID:1023534"
CDS complement(582076..582480)
/gene="ybgC"
/locus_tag="SF0561"
/note="Code: R; COG: COG0824"
/codon_start=1
/transl_table=11
/product="acyl-CoA thioester hydrolase YbgC"
/protein_id="NP_706498.1"
/db_xref="GeneID:1023534"
/translation="MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
misc_feature complement(582082..582471)
/gene="ybgC"
/locus_tag="SF0561"
/note="acyl-CoA thioesterase YbgC; Provisional; Region:
PRK10800"
/db_xref="CDD:182742"
misc_feature complement(order(582214..582225,582304..582306,
582310..582312,582382..582384))
/gene="ybgC"
/locus_tag="SF0561"
/note="active site"
/db_xref="CDD:238329"
gene complement(582630..582923)
/gene="ybgE"
/locus_tag="SF0562"
/db_xref="GeneID:1023513"
CDS complement(582630..582923)
/gene="ybgE"
/locus_tag="SF0562"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706499.1"
/db_xref="GeneID:1023513"
/translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF"
misc_feature complement(582633..582923)
/gene="ybgE"
/locus_tag="SF0562"
/note="hypothetical protein; Provisional; Region:
PRK10588"
/db_xref="CDD:236721"
gene complement(583051..584190)
/gene="cydB"
/locus_tag="SF0563"
/db_xref="GeneID:1023499"
CDS complement(583051..584190)
/gene="cydB"
/locus_tag="SF0563"
/note="Code: C; COG: COG1294"
/codon_start=1
/transl_table=11
/product="cytochrome d ubiquinol oxidase subunit 2"
/protein_id="NP_706500.1"
/db_xref="GeneID:1023499"
/translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLL
LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
misc_feature complement(583054..584190)
/gene="cydB"
/locus_tag="SF0563"
/note="cytochrome d ubiquinol oxidase subunit II; Region:
PRK15003"
/db_xref="CDD:184965"
gene complement(584206..585777)
/gene="cydA"
/locus_tag="SF0564"
/db_xref="GeneID:1023517"
CDS complement(584206..585777)
/gene="cydA"
/locus_tag="SF0564"
/note="Code: C; COG: COG1271"
/codon_start=1
/transl_table=11
/product="cytochrome d terminal oxidase subunit 1"
/protein_id="NP_706501.1"
/db_xref="GeneID:1023517"
/translation="MMLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLS
GKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGL
MAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDF
NFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAK
RSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIP
DQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRS
GSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFR
IMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQ
PWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTG
RYHFEQSSTTTQPAR"
misc_feature complement(584209..585774)
/gene="cydA"
/locus_tag="SF0564"
/note="cytochrome bd-I ubiquinol oxidase subunit CydA;
Region: PRK15097"
/db_xref="CDD:185052"
gene complement(586371..586598)
/locus_tag="SF0564a"
/db_xref="GeneID:16608308"
CDS complement(586371..586598)
/locus_tag="SF0564a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439232.1"
/db_xref="GeneID:16608308"
/translation="MRGQIVDKGRFVHAGYGMNALFGLQKQANSIYCRDDVDTGKRSA
SGNFVFIFTLKLRICGFIFNKIITTGELIII"
gene complement(586623..589256)
/gene="ybgG"
/locus_tag="SF0565"
/db_xref="GeneID:1023509"
CDS complement(586623..589256)
/gene="ybgG"
/locus_tag="SF0565"
/note="Code: G; COG: COG0383"
/codon_start=1
/transl_table=11
/product="alpha-mannosidase"
/protein_id="NP_706502.1"
/db_xref="GeneID:1023509"
/translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
NEYKYYVLDGQTAILEDYFAVKPENKDRLKKLVEAGKLIIGPWYTQTDTTIVSAESIV
RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITCTMFWRGCSERHGTDK
TEFLWQSSDGSEVTAQVMPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLP
NGHDQMPLQQNIFEVMEKLREIYPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGK
YMRVHRTIGSTRMDIKVAHARIENKIVNLLEPLATLARTLGFGYHHGLLEKMWKEILK
NHAHDSIGCCCRDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNL
MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF
MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGTLQLV
DKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITSANAKPQCEIIHEAWQSRAVIR
YEMAVPRNLQQRSARQSTGRVDVELVVTLSHNNRRIDVDINLDNQADDHRLRVLIPTS
FNTDSVLADTQFGSLTRPVNDSAMNNWQQESWKEAPVPVWNMLNYAALQEGRNGMAVF
SEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPRRPSGIKMPVPDSQLRGLLSC
RLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMPP
VGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQ
GSNLSGPFLPGQSRTFSYRLA"
misc_feature complement(586632..589253)
/gene="ybgG"
/locus_tag="SF0565"
/note="mannosylglycerate hydrolase; Region: PRK09819"
/db_xref="CDD:182093"
gene complement(589274..591250)
/gene="hrsA"
/locus_tag="SF0566"
/db_xref="GeneID:1023536"
CDS complement(589274..591250)
/gene="hrsA"
/locus_tag="SF0566"
/codon_start=1
/transl_table=11
/product="PTS system 2-O-a-mannosyl-D-glycerate specific
transporter subunit IIABC"
/protein_id="NP_706503.1"
/db_xref="GeneID:1023536"
/translation="MVLFCRAHWRDYKNDQVRIMMNLTTLTHRDALCLNARFTSREEA
IHALTQRLAALGKISSTEQFLKEVYRRESLGPTALSEGLAVPHGKTAAVKEAAFAVAT
LSEPLQWEGVDGPEAVDLVVLLAIPLNEAGTTHMQLLTALTTRLADDEIRARIQSATT
PDELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVY
VEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEAL
IQQSLTLERGDETRTLQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLL
SQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGL
AANMIGSGFLGAVVGGLIAGYLIRWMKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLML
FVVGEPVAWINNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMA
NGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPM
AIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWF
GAALVGAAISTAILLIWRRHAVKHGNYLTDGVMP"
misc_feature complement(589298..591190)
/gene="hrsA"
/locus_tag="SF0566"
/note="PTS system 2-O-a-mannosyl-D-glycerate specific
transporter subunit IIABC; Provisional; Region: PRK09765"
/db_xref="CDD:182066"
gene 591360..592082
/gene="farR"
/locus_tag="SF0567"
/db_xref="GeneID:1026068"
CDS 591360..592082
/gene="farR"
/locus_tag="SF0567"
/note="Code: K; COG: COG2188"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor MngR"
/protein_id="NP_706504.1"
/db_xref="GeneID:1026068"
/translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
EVIPADDFLQQQLQITVQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY
SRNAFNTDDYKFTLIAQRKSSR"
misc_feature 591360..592079
/gene="farR"
/locus_tag="SF0567"
/note="GntR family transcriptional regulator; Region:
PRK09764"
/db_xref="CDD:182065"
gene complement(592185..593054)
/gene="sucD"
/locus_tag="SF0568"
/db_xref="GeneID:1023456"
CDS complement(592185..593054)
/gene="sucD"
/locus_tag="SF0568"
/note="Code: C; COG: COG0074"
/codon_start=1
/transl_table=11
/product="succinyl-CoA synthetase subunit alpha"
/protein_id="NP_706505.1"
/db_xref="GeneID:1023456"
/translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
GTTHLGLPVFNTVREAVAATGASASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
LADIGEALKTVLK"
misc_feature complement(592188..593051)
/gene="sucD"
/locus_tag="SF0568"
/note="Succinyl-CoA synthetase, alpha subunit [Energy
production and conversion]; Region: SucD; COG0074"
/db_xref="CDD:439844"
gene complement(593054..594220)
/gene="sucC"
/locus_tag="SF0569"
/db_xref="GeneID:1023481"
CDS complement(593054..594220)
/gene="sucC"
/locus_tag="SF0569"
/note="Code: C; COG: COG0045"
/codon_start=1
/transl_table=11
/product="succinyl-CoA synthetase subunit beta"
/protein_id="NP_706506.1"
/db_xref="GeneID:1023481"
/translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG
RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
DGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIG
AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
misc_feature complement(593057..594220)
/gene="sucC"
/locus_tag="SF0569"
/note="Succinyl-CoA synthetase, beta subunit [Energy
production and conversion]; Region: SucC; COG0045"
/db_xref="CDD:439815"
gene complement(594314..595531)
/gene="sucB"
/locus_tag="SF0570"
/db_xref="GeneID:1023500"
CDS complement(594314..595531)
/gene="sucB"
/locus_tag="SF0570"
/note="Code: C; COG: COG0508"
/codon_start=1
/transl_table=11
/product="dihydrolipoamide succinyltransferase"
/protein_id="NP_706507.1"
/db_xref="GeneID:1023500"
/translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAP
AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK
ELLEEPTRLLLDV"
misc_feature complement(594317..595528)
/gene="sucB"
/locus_tag="SF0570"
/note="2-oxoglutarate dehydrogenase complex
dihydrolipoyllysine-residue succinyltransferase; Region:
PRK05704"
/db_xref="CDD:235571"
gene complement(595546..598347)
/gene="sucA"
/locus_tag="SF0571"
/db_xref="GeneID:1023497"
CDS complement(595546..598347)
/gene="sucA"
/locus_tag="SF0571"
/note="Code: C; COG: COG0567"
/codon_start=1
/transl_table=11
/product="2-oxoglutarate dehydrogenase subunit E1"
/protein_id="NP_706508.1"
/db_xref="GeneID:1023497"
/translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELISAL
KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
RARLDRLDEPNSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY
MSVHQKQQQDLVNDALNVE"
misc_feature complement(595555..598344)
/gene="sucA"
/locus_tag="SF0571"
/note="2-oxoglutarate dehydrogenase E1 component;
Reviewed; Region: sucA; PRK09404"
/db_xref="CDD:236499"
gene complement(598329..598589)
/locus_tag="SF0572"
/db_xref="GeneID:1023504"
CDS complement(598329..598589)
/locus_tag="SF0572"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706509.1"
/db_xref="GeneID:1023504"
/translation="MNALSGLQVITRRPDKRSASGVTKKCRKSLKTAPDTKTVFKGSF
ASHYVDKSSQVNPGTHITVRGSIHGEVSIKKMLKGSRCRTAL"
gene complement(598648..599364)
/gene="sdhB"
/locus_tag="SF0573"
/db_xref="GeneID:1027542"
CDS complement(598648..599364)
/gene="sdhB"
/locus_tag="SF0573"
/note="Code: C; COG: COG0479"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase iron-sulfur subunit"
/protein_id="NP_706510.1"
/db_xref="GeneID:1027542"
/translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
GLNPTRAIGHIKSMLLQRNA"
misc_feature complement(598657..599355)
/gene="sdhB"
/locus_tag="SF0573"
/note="succinate dehydrogenase iron-sulfur subunit;
Reviewed; Region: sdhB; PRK05950"
/db_xref="CDD:235652"
gene complement(599380..601146)
/gene="sdhA"
/locus_tag="SF0574"
/db_xref="GeneID:1023512"
CDS complement(599380..601146)
/gene="sdhA"
/locus_tag="SF0574"
/note="Code: C; COG: COG1053"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase flavoprotein subunit"
/protein_id="NP_706511.2"
/db_xref="GeneID:1023512"
/translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALHDASESDVEASLDRLNRWNNN
RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
TRRSVNMEPKLRPAFPPKIRTY"
misc_feature complement(599383..601068)
/gene="sdhA"
/locus_tag="SF0574"
/note="FAD binding domain; Region: FAD_binding_2; cl46878"
/db_xref="CDD:481218"
gene complement(601146..601493)
/gene="sdhD"
/locus_tag="SF0575"
/db_xref="GeneID:1023493"
CDS complement(601146..601493)
/gene="sdhD"
/locus_tag="SF0575"
/note="Code: C; COG: COG2142"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase cytochrome b556 small
membrane subunit"
/protein_id="NP_706512.1"
/db_xref="GeneID:1023493"
/translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV
VYVIYGFVVVWGV"
misc_feature complement(601149..601493)
/gene="sdhD"
/locus_tag="SF0575"
/note="succinate dehydrogenase membrane anchor subunit;
Region: sdhD; PRK09488"
/db_xref="CDD:181901"
misc_feature complement(order(601173..601175,601182..601184,
601248..601250,601350..601352,601359..601361,
601434..601436))
/gene="sdhD"
/locus_tag="SF0575"
/note="SdhC subunit interface [polypeptide binding]; other
site"
/db_xref="CDD:239574"
misc_feature complement(order(601269..601271,601281..601283,
601290..601292,601413..601415,601425..601427))
/gene="sdhD"
/locus_tag="SF0575"
/note="proximal heme binding site [chemical binding];
other site"
/db_xref="CDD:239574"
misc_feature complement(order(601365..601367,601371..601373,
601383..601385))
/gene="sdhD"
/locus_tag="SF0575"
/note="cardiolipin binding site [active]"
/db_xref="CDD:239574"
misc_feature complement(order(601239..601241,601248..601253,
601260..601262))
/gene="sdhD"
/locus_tag="SF0575"
/note="Iron-sulfur protein interface [active]"
/db_xref="CDD:239574"
misc_feature complement(601245..601247)
/gene="sdhD"
/locus_tag="SF0575"
/note="proximal quinone binding site [chemical binding];
other site"
/db_xref="CDD:239574"
gene complement(601487..601891)
/gene="sdhC"
/locus_tag="SF0576"
/db_xref="GeneID:1023529"
CDS complement(601487..601891)
/gene="sdhC"
/locus_tag="SF0576"
/note="Code: C; COG: COG2009"
/codon_start=1
/transl_table=11
/product="succinate dehydrogenase cytochrome b556 subunit"
/protein_id="NP_706513.3"
/db_xref="GeneID:1023529"
/translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFV
AVGILQWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
misc_feature complement(601490..601876)
/gene="sdhC"
/locus_tag="SF0576"
/note="succinate dehydrogenase cytochrome b556 subunit;
Region: sdhC; PRK09487"
/db_xref="CDD:181900"
misc_feature complement(order(601589..601591,601595..601597,
601604..601606,601784..601786,601805..601807,
601814..601816,601820..601828,601841..601852))
/gene="sdhC"
/locus_tag="SF0576"
/note="Iron-sulfur protein interface [active]"
/db_xref="CDD:239579"
misc_feature complement(order(601784..601786,601793..601798,
601817..601819))
/gene="sdhC"
/locus_tag="SF0576"
/note="proximal quinone binding site [chemical binding];
other site"
/db_xref="CDD:239579"
misc_feature complement(order(601505..601507,601592..601594,
601655..601657,601703..601705,601730..601735,
601742..601744,601751..601753,601784..601786))
/gene="sdhC"
/locus_tag="SF0576"
/note="SdhD (CybS) interface [polypeptide binding]; other
site"
/db_xref="CDD:239579"
misc_feature complement(order(601622..601627,601763..601768,
601784..601786))
/gene="sdhC"
/locus_tag="SF0576"
/note="proximal heme binding site [chemical binding];
other site"
/db_xref="CDD:239579"
gene 602585..603868
/gene="gltA"
/locus_tag="SF0577"
/db_xref="GeneID:1023492"
CDS 602585..603868
/gene="gltA"
/locus_tag="SF0577"
/note="Code: C; COG: COG0372"
/codon_start=1
/transl_table=11
/product="type II citrate synthase"
/protein_id="NP_706514.1"
/db_xref="GeneID:1023492"
/translation="MADTKAKLNLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
IAHWSEMHSYGMKIARPRQLYTGYEKRDFKSDIKR"
misc_feature 602585..603832
/gene="gltA"
/locus_tag="SF0577"
/note="citrate synthase; Region: gltA; PRK05614"
/db_xref="CDD:180164"
gene 604259..604825
/gene="ybgD"
/locus_tag="SF0578"
/db_xref="GeneID:1027546"
CDS 604259..604825
/gene="ybgD"
/locus_tag="SF0578"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="fimbrial-like protein"
/protein_id="NP_706515.1"
/db_xref="GeneID:1027546"
/translation="MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEI
HQDDIDKEVELGQVTTSHINQSHHSDAVAVDLLLVNCDLENSSNGSGGKISKVAVTFD
SSAKTTGADPILNNTSTGEATGVGVRLMNKDQSNIVLGTATPDIDLAPTSSEQTLNFF
AWMEQIDQATPVTPGAVTANATYVLDYK"
misc_feature 604271..604822
/gene="ybgD"
/locus_tag="SF0578"
/note="Pilin (type 1 fimbrial protein) [Cell motility];
Region: FimA; COG3539"
/db_xref="CDD:442760"
gene 604876..607335
/gene="ybgQ"
/locus_tag="SF0579"
/db_xref="GeneID:1023489"
CDS 604876..607335
/gene="ybgQ"
/locus_tag="SF0579"
/note="Code: N; COG: COG3188"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706516.2"
/db_xref="GeneID:1023489"
/translation="MDTVNIYRLSFVSCLVVAMPCALAVEFNLNVLDKSMRDRIDISL
LKEKGVIAPGEYFVSVAVNNNQISNEQKINWHKNDDKTIPCINDLLVDKFGLKPEVRQ
SLPLINQCVDFSSRPEMLFNFDQANQQLNISIPQAWLAWHSENWTPPSTWKEGVAGVL
MDYNLFASSYRPQDGSSSTNLNAYGTAGINTGAWRLRSDYQLNHTDSDDNHEQSGEIS
RTYLFRPLPQLGSKLTLGETDFSPNIFDGFSYTGAALASDDRMLPWELRGYAPQISGI
AQTNATVTISQSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAA
STPFLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSNTSLYSGLLLSGDD
YHSAAMGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQVDATNSTISLA
AYRFSDRHFHSYANYLDHKYNDSDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWN
ADASTTANITAGFNVDIGDWRDISISTSFNTTHYEDKDRDNQIYLSISLPFGNGGRVG
YDMQNSSHSTTHRMSWNDTLDERNSWGMSAGLQSDRPDNGAQVSGNYQHLSSAGEWDI
SGTYAANDYSSVSSSWSGSFTATQYGAAFHRRSSTNEPRLMVSTDGVADIPVQGNLDY
TNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVIKETWIEGAIGYKSLASRSGK
DVNVIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWLSGVAENQKFTVVWGDSQH
CSLHLPEHMEDTANRLILPCH"
misc_feature 604888..607332
/gene="ybgQ"
/locus_tag="SF0579"
/note="Outer membrane usher protein FimD/PapC [Cell
motility, Extracellular structures]; Region: FimD;
COG3188"
/db_xref="CDD:442421"
gene 607350..608081
/gene="ybgP"
/locus_tag="SF0580"
/db_xref="GeneID:1023506"
CDS 607350..608081
/gene="ybgP"
/locus_tag="SF0580"
/note="Code: N; COG: COG3121"
/codon_start=1
/transl_table=11
/product="chaperone"
/protein_id="NP_706517.2"
/db_xref="GeneID:1023506"
/translation="MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDN
RSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGDRE
TLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG
NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMD
DYGALRMTTLNCSGQCHLQAVEAKK"
misc_feature 607389..608015
/gene="ybgP"
/locus_tag="SF0580"
/note="P pilus assembly protein, chaperone PapD
[Extracellular structures]; Region: FimC; COG3121"
/db_xref="CDD:442355"
gene 608048..609154
/gene="ybgO"
/locus_tag="SF0581"
/pseudo
/db_xref="GeneID:1023558"
misc_feature 608048..609154
/gene="ybgO"
/locus_tag="SF0581"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1786935 (363 aa). BLAST with
identity of 96% in 369 aa. This CDS contains deletion. The
sequence has been checked and is believed to be correct."
/pseudo
gene 609261..610352
/gene="abrB"
/locus_tag="SF0582"
/db_xref="GeneID:1023496"
CDS 609261..610352
/gene="abrB"
/locus_tag="SF0582"
/note="Code: R; COG: COG3180"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706518.2"
/db_xref="GeneID:1023496"
/translation="MLYRYTKEKIMRERRMPVLQWGMLCVLSLLLSIGFLAVHLPAAL
LLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAANWPIVLAI
LLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL
RVLFVAGAAVLVTRMMLGDNAEAVNQQIVWFPPVSINLLLTILLAVVAGTAGCMLRLP
SGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQ
ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMA
MQTLRLFSILLTGPAIARFISTYAPKRSA"
misc_feature 609291..610343
/gene="abrB"
/locus_tag="SF0582"
/note="Uncharacterized membrane protein AbrB, regulator of
aidB expression [General function prediction only];
Region: AbrB; COG3180"
/db_xref="CDD:442413"
gene complement(610349..611140)
/gene="nei"
/locus_tag="SF0583"
/db_xref="GeneID:1023561"
CDS complement(610349..611140)
/gene="nei"
/locus_tag="SF0583"
/note="Code: L; COG: COG0266"
/codon_start=1
/transl_table=11
/product="endonuclease VIII"
/protein_id="NP_706519.1"
/db_xref="GeneID:1023561"
/translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQH
VTHVETRGKALLTHFPNGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL
LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE
NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
misc_feature complement(610352..611140)
/gene="nei"
/locus_tag="SF0583"
/note="endonuclease VIII; Provisional; Region: PRK10445"
/db_xref="CDD:182467"
gene complement(611176..611910)
/gene="ybgL"
/locus_tag="SF0584"
/db_xref="GeneID:1023575"
CDS complement(611176..611910)
/gene="ybgL"
/locus_tag="SF0584"
/note="Code: R; COG: COG1540"
/codon_start=1
/transl_table=11
/product="LamB/YcsF family protein"
/protein_id="NP_706520.1"
/db_xref="GeneID:1023575"
/translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
VKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVAAQTVCLH
GDGEHALAFARRLRATFAKKGIVVAA"
misc_feature complement(611185..611904)
/gene="ybgL"
/locus_tag="SF0584"
/note="Escherichia coli putative lactam utilization
protein YbgL and similar proteins; Region:
LamB_YcsF_YbgL_like; cd10800"
/db_xref="CDD:212111"
misc_feature complement(order(611257..611259,611389..611391,
611398..611400,611422..611424,611431..611433,
611578..611580,611590..611595,611599..611601,
611707..611709,611740..611742,611887..611889))
/gene="ybgL"
/locus_tag="SF0584"
/note="putative active site [active]"
/db_xref="CDD:212111"
gene complement(611900..612832)
/gene="ybgK"
/locus_tag="SF0585"
/pseudo
/db_xref="GeneID:1023565"
misc_feature complement(611900..612832)
/gene="ybgK"
/locus_tag="SF0585"
/note="Similar to Escherichia coli K12 carboxylase gi:
1786930 (311 aa). BLAST with identity of 97% in 310 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(612826..613482)
/gene="ybgJ"
/locus_tag="SF0586"
/db_xref="GeneID:1023483"
CDS complement(612826..613482)
/gene="ybgJ"
/locus_tag="SF0586"
/note="Code: E; COG: COG2049"
/codon_start=1
/transl_table=11
/product="carboxylase"
/protein_id="NP_706521.1"
/db_xref="GeneID:1023483"
/translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV
EAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
AVVAAYCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGIC
"
misc_feature complement(612850..613458)
/gene="ybgJ"
/locus_tag="SF0586"
/note="Carboxyltransferase domain, subdomain C and D;
Region: CT_C_D; cl19310"
/db_xref="CDD:473162"
gene complement(613505..614248)
/gene="ybgI"
/locus_tag="SF0587"
/db_xref="GeneID:1023563"
CDS complement(613505..614248)
/gene="ybgI"
/locus_tag="SF0587"
/note="Code: S; COG: COG0327"
/codon_start=1
/transl_table=11
/product="metal-binding protein"
/protein_id="NP_706522.1"
/db_xref="GeneID:1023563"
/translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGMELASWIEARLGRKPLWCGDT
GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
ERGGIRALSEWLNENTDLDVTFIDIPNPA"
misc_feature complement(613508..614248)
/gene="ybgI"
/locus_tag="SF0587"
/note="type 2 GTP cyclohydrolase I; Region: PRK10799"
/db_xref="CDD:182741"
gene 614519..616000
/gene="ybgH"
/locus_tag="SF0588"
/db_xref="GeneID:1026075"
CDS 614519..616000
/gene="ybgH"
/locus_tag="SF0588"
/note="Code: E; COG: COG3104"
/codon_start=1
/transl_table=11
/product="dipeptide/tripeptide permease D"
/protein_id="NP_706523.1"
/db_xref="GeneID:1026075"
/translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND
THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY
AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY
SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
misc_feature 614519..615997
/gene="ybgH"
/locus_tag="SF0588"
/note="dipeptide permease; Region: PRK15462"
/db_xref="CDD:237971"
misc_feature order(614582..614584,614594..614596,614870..614872,
614948..614950,614957..614962,614969..614971,
615368..615370,615467..615472,615479..615481,
615689..615691)
/gene="ybgH"
/locus_tag="SF0588"
/note="chemical substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:340904"
gene complement(616150..617568)
/gene="phrB"
/locus_tag="SF0589"
/db_xref="GeneID:1023530"
CDS complement(616150..617568)
/gene="phrB"
/locus_tag="SF0589"
/note="Code: L; COG: COG0415"
/codon_start=1
/transl_table=11
/product="deoxyribodipyrimidine photolyase"
/protein_id="NP_706524.1"
/db_xref="GeneID:1023530"
/translation="MTTHLAWFRQDLRLHDNLALAAACRNSSARVLALYIATPRKWET
HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY
NYQYEVNERARDVDVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
RLREGMPECVAAPKVRSSGSIKPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCEN
GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
IWREFYRHLMTYYPSLCKHRPFIAWTDRVQWQSNPAHLQAWQKGKTGYPIIDAAMRQL
NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
AAPYFRIFNPITQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWAQKAGVKLDYPQP
IVEHKEARVQTLAAYEAARKGK"
misc_feature complement(616153..617568)
/gene="phrB"
/locus_tag="SF0589"
/note="deoxyribodipyrimidine photolyase; Provisional;
Region: PRK10674"
/db_xref="CDD:236734"
gene complement(617565..618074)
/gene="ybgA"
/locus_tag="SF0590"
/db_xref="GeneID:1023550"
CDS complement(617565..618074)
/gene="ybgA"
/locus_tag="SF0590"
/note="Code: S; COG: COG3272"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706525.1"
/db_xref="GeneID:1023550"
/translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
LAHSQPEYRKLGPFVADIHQWQNLDDFYNQYRQRVIVLLSHPANPRDHTNVLMHVQGY
FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
INLRHSGVL"
misc_feature complement(617568..618074)
/gene="ybgA"
/locus_tag="SF0590"
/note="hypothetical protein; Provisional; Region:
PRK10167"
/db_xref="CDD:182280"
gene 618203..618490
/locus_tag="SF0591"
/db_xref="GeneID:1023544"
CDS 618203..618490
/locus_tag="SF0591"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706526.1"
/db_xref="GeneID:1023544"
/translation="MAEHDITPEVTISKTQRRYKVGYVRARHQDRKTGIARYYSQHPS
LHLKGDWLKEAGFDTGRGVTVKISEGGLTIIADSDEVQELRDGMFSVLNES"
misc_feature 618248..618430
/locus_tag="SF0591"
/note="Toxin SymE, type I toxin-antitoxin system; Region:
SymE_toxin; pfam08845"
/db_xref="CDD:370150"
gene complement(619508..622315)
/locus_tag="SF0594"
/db_xref="GeneID:1023568"
CDS complement(619508..622315)
/locus_tag="SF0594"
/codon_start=1
/transl_table=11
/product="Rhs-family protein"
/protein_id="NP_706529.1"
/db_xref="GeneID:1023568"
/translation="MEEAFWAARQGDALLHTSFMADVLGAVLEVAANVVIDALIVGTT
SLLATSVGITMGCTAVVLTGFVAGVAMVYTGVTEKVSEACSALANMLFPPQIEGYILT
GSGDTWINSKPAARAAATAASRQDIEAQEAQAKAEQEEAQRQEDARTFRDVAGEYLEM
AGAIALAVNPVTGPVLMSRALHDQLSTEEGRSEMVDGVTHFVSELWQPTVASAAPGST
PTPDDKIDCHKHPSSLTQFLAQKKAAFLDDPLGTALNLLNPGGMLETAFQGVNAVIGS
ISNLFKGDDEPPAAEYIAEGARDVRINSQPATRSGARCTCEARVVNEPGNGAFVSPDV
RIGGPLLVVRDIRSGRSQITLVATVALMFLRPGKMLSKIACFAASVGMSMLTQKATSA
LPHPVNAATGAKYLADDDDFDFSLPGHFPLDWQRVYSSRDERTEGMFGQGWSVMYEVS
LVCTPGSADENCMTFVSGMGRRLDMEAVLPGGGFYSPGEGLAVRRGEQGHWLISSDDG
QCFLFEADPHHPQRQRLKMLGDRNSNCLNLYYDDRGRIVEISGEQQRPCIRLYYELAA
HPRRVTQIYQHFPETAPLLLRRYSYDEAGHLNGVYDSTGHLLREFAYDENHCMTLHRQ
PGGEGYYYQWGWYEGPDDAAWRVTGHHTDSGEQYRLAWDLAQRRLCVTDGLGRTRYHQ
WDAQNQVTAYQDEAGQVTTFRWSDEERLLLGMTDPQGGKWRYVYDLQGHITETHDPLG
RVEQAQWHPVWHQPETEVDAAGNLLGRRAGERATAENSVVPFNRLMSYRGVHYRYDEF
GRAVEKEGRSGTQSYRYDAEHRMVEVTTARGTYRYVYDALGRRTEKQHISPDGKPYNR
TKFLWDGMRLAQESRPEGTGSLYIYRDQGSYEPLARVDKAGKEGPNRILYFHTDVNGA
PVRDDGQRRENRVGDGVSGLG"
misc_feature complement(621305..>621466)
/locus_tag="SF0594"
/note="proline-alanine-alanine-arginine (PAAR) repeat
superfamily; Region: PAAR_like; cl21497"
/db_xref="CDD:451275"
misc_feature complement(<619760..621223)
/locus_tag="SF0594"
/note="RHS element core protein; Region: RHS_core;
NF041261"
/db_xref="CDD:469161"
mobile_element complement(622916..623662)
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene complement(622931..623326)
/gene="insB"
/locus_tag="SF0595"
/db_xref="GeneID:1023537"
CDS complement(622931..623326)
/gene="insB"
/locus_tag="SF0595"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706530.1"
/db_xref="GeneID:1023537"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLKLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(622934..623323)
/gene="insB"
/locus_tag="SF0595"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(623353..623628)
/gene="insA"
/locus_tag="SF0596"
/db_xref="GeneID:1023525"
CDS complement(623353..623628)
/gene="insA"
/locus_tag="SF0596"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706531.1"
/db_xref="GeneID:1023525"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<623356..623607)
/gene="insA"
/locus_tag="SF0596"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(624101..624307)
/gene="ybfA"
/locus_tag="SF0597"
/db_xref="GeneID:1023519"
CDS complement(624101..624307)
/gene="ybfA"
/locus_tag="SF0597"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706532.1"
/db_xref="GeneID:1023519"
/translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
RVWSKTSDKPVWMDQAEKATGDFY"
misc_feature complement(624116..624298)
/gene="ybfA"
/locus_tag="SF0597"
/note="Protein of unknown function (DUF2517); Region:
DUF2517; pfam10725"
/db_xref="CDD:431458"
gene 624709..626382
/gene="kdpA"
/locus_tag="SF0598"
/db_xref="GeneID:1023557"
CDS 624709..626382
/gene="kdpA"
/locus_tag="SF0598"
/note="Code: P; COG: COG2060"
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit A"
/protein_id="NP_706533.2"
/db_xref="GeneID:1023557"
/translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTAGVER
ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFAFIRAFTRQSM
STLGNAWVDLLRITLWVLVPVALLIALFFIQQGAQQNFLPYQAVNTVEGAQQLLPMGP
VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGD
RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGADSSINMEGKESRFGVLVSSL
FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPSP
HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
misc_feature 624709..626379
/gene="kdpA"
/locus_tag="SF0598"
/note="K+-transporting ATPase, KdpA subunit [Inorganic ion
transport and metabolism]; Region: KdpA; COG2060"
/db_xref="CDD:441663"
gene 626405..628452
/gene="kdpB"
/locus_tag="SF0599"
/pseudo
/db_xref="GeneID:1023515"
misc_feature 626405..628452
/gene="kdpB"
/locus_tag="SF0599"
/note="'Similar to Escherichia coli K12 ATPase of
high-affinity potassium transport system, B chain gi:
1786914 (683 aa). BLAST with identity of 97% in 683 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct.'"
/pseudo
gene 629026..631706
/gene="kdpD"
/locus_tag="SF0600"
/pseudo
/db_xref="GeneID:1023538"
misc_feature 629026..631706
/gene="kdpD"
/locus_tag="SF0600"
/note="Similar to Escherichia coli K12 sensor for
high-affinity potassium transport system gi: 1786912 (895
aa). BLAST with identity of 97% in 894 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct."
/pseudo
gene 631703..632388
/gene="kdpE"
/locus_tag="SF0601"
/pseudo
/db_xref="GeneID:1023531"
misc_feature 631703..632388
/gene="kdpE"
/locus_tag="SF0601"
/note="Similar to Escherichia coli K12 regulator of kdp
operon (transcriptional effector) gi: 1786911 (226 aa).
BLAST with identity of 96% in 229 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene 633213..635275
/gene="speF"
/locus_tag="SF0603"
/pseudo
/db_xref="GeneID:1023532"
misc_feature 633213..635275
/gene="speF"
/locus_tag="SF0603"
/note="'Similar to Escherichia coli K12 ornithine
decarboxylase isozyme, inducible gi: 1786909 (733 aa).
BLAST with identity of 95% in 688 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct.'"
/pseudo
gene 635272..636591
/gene="potE"
/locus_tag="SF0604"
/db_xref="GeneID:1023576"
CDS 635272..636591
/gene="potE"
/locus_tag="SF0604"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="putrescine transporter"
/protein_id="NP_706535.1"
/db_xref="GeneID:1023576"
/translation="MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIIS
WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFIANYTYGVSLLIANVA
IAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGGIIP
VVGLCIIGWFWFSPTLYVDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVEN
PERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKV
IMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQS
GLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVA
FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG"
misc_feature 635281..636588
/gene="potE"
/locus_tag="SF0604"
/note="putrescine transporter; Provisional; Region: potE;
PRK10655"
/db_xref="CDD:182622"
gene complement(636647..638287)
/gene="pgm"
/locus_tag="SF0605"
/db_xref="GeneID:1023520"
CDS complement(636647..638287)
/gene="pgm"
/locus_tag="SF0605"
/note="Code: G; COG: COG0033"
/codon_start=1
/transl_table=11
/product="phosphoglucomutase"
/protein_id="NP_706536.2"
/db_xref="GeneID:1023520"
/translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
NGGPADTNVTKVVEDKANALMADGLKGVKRISLDEAMASGYVKEQDLVQPFVEGLADI
VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
misc_feature complement(636656..638284)
/gene="pgm"
/locus_tag="SF0605"
/note="phosphoglucomutase, alpha-D-glucose
phosphate-specific; Region: pgm; TIGR01132"
/db_xref="CDD:273459"
misc_feature complement(order(636740..636742,636755..636763,
636767..636769,637106..637108,637112..637114,
637118..637120,637169..637177,637238..637240,
637361..637366,637370..637372,637376..637378,
637820..637822,637844..637852,638144..638146,
638153..638155,638159..638161))
/gene="pgm"
/locus_tag="SF0605"
/note="active site"
/db_xref="CDD:100094"
misc_feature complement(order(636740..636742,636755..636763,
636767..636769,637106..637108,637112..637114,
637118..637120,637169..637171,637175..637177,
637238..637240,637361..637363,637850..637852,
638153..638155))
/gene="pgm"
/locus_tag="SF0605"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100094"
misc_feature complement(order(637364..637366,637370..637372,
637376..637378,637850..637852))
/gene="pgm"
/locus_tag="SF0605"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:100094"
gene complement(638313..638858)
/gene="seqA"
/locus_tag="SF0606"
/db_xref="GeneID:1023526"
CDS complement(638313..638858)
/gene="seqA"
/locus_tag="SF0606"
/note="Code: L; COG: COG3057"
/codon_start=1
/transl_table=11
/product="replication initiation regulator SeqA"
/protein_id="NP_706537.2"
/db_xref="GeneID:1023526"
/translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
VTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
EHIMQSMQFPAELIEKVCGTI"
misc_feature complement(638316..638858)
/gene="seqA"
/locus_tag="SF0606"
/note="replication initiation negative regulator SeqA;
Region: PRK11187"
/db_xref="CDD:236874"
gene 639044..639808
/gene="ybfF"
/locus_tag="SF0607"
/db_xref="GeneID:1026082"
CDS 639044..639808
/gene="ybfF"
/locus_tag="SF0607"
/note="Code: R; COG: COG0596"
/codon_start=1
/transl_table=11
/product="acyl-CoA esterase"
/protein_id="NP_706538.1"
/db_xref="GeneID:1026082"
/translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
IIQVDMRNHGLSPREPVMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALA
PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLL
AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
misc_feature 639044..639805
/gene="ybfF"
/locus_tag="SF0607"
/note="esterase; Region: PRK10673"
/db_xref="CDD:182637"
gene 639879..640241
/gene="ybfE"
/locus_tag="SF0608"
/db_xref="GeneID:1023596"
CDS 639879..640241
/gene="ybfE"
/locus_tag="SF0608"
/codon_start=1
/transl_table=11
/product="LexA regulated protein"
/protein_id="NP_706539.2"
/db_xref="GeneID:1023596"
/translation="MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPG
RPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSEL
IEEMLMQQLAALRSQGIV"
misc_feature 639948..640217
/gene="ybfE"
/locus_tag="SF0608"
/note="LexA regulated protein; Provisional; Region:
PRK11675"
/db_xref="CDD:183272"
gene 640381..640911
/gene="fldA"
/locus_tag="SF0609"
/db_xref="GeneID:1026090"
CDS 640381..640911
/gene="fldA"
/locus_tag="SF0609"
/note="Code: C; COG: COG0716"
/codon_start=1
/transl_table=11
/product="flavodoxin FldA"
/protein_id="NP_706540.2"
/db_xref="GeneID:1026090"
/translation="MAIHGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
GTIRDIIEPRGATIDADWPTAGYHFQASKGLADDDHFVGLAIDEDRHPELTADRVEKW
VKQISEELHLDEILNA"
misc_feature 640381..640890
/gene="fldA"
/locus_tag="SF0609"
/note="flavodoxin FldA; Validated; Region: PRK09267"
/db_xref="CDD:236439"
gene 641200..641646
/gene="fur"
/locus_tag="SF0610"
/db_xref="GeneID:1023593"
CDS 641200..641646
/gene="fur"
/locus_tag="SF0610"
/note="Code: P; COG: COG0735"
/codon_start=1
/transl_table=11
/product="ferric uptake regulator"
/protein_id="NP_706541.1"
/db_xref="GeneID:1023593"
/translation="MTDNNTALKKAGLRVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
SDDSIEARQGEIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
misc_feature 641200..641643
/gene="fur"
/locus_tag="SF0610"
/note="ferric uptake regulator; Provisional; Region: fur;
PRK09462"
/db_xref="CDD:236527"
gene complement(641730..642056)
/gene="ybfN"
/locus_tag="SF0611"
/db_xref="GeneID:1023598"
CDS complement(641730..642056)
/gene="ybfN"
/locus_tag="SF0611"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706542.2"
/db_xref="GeneID:1023598"
/translation="MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP
EKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE
IRSNNK"
misc_feature complement(641736..641999)
/gene="ybfN"
/locus_tag="SF0611"
/note="YbfN-like lipoprotein; Region: YbfN; pfam13982"
/db_xref="CDD:433624"
gene complement(642093..643499)
/gene="ybfM"
/locus_tag="SF0612"
/db_xref="GeneID:1027545"
CDS complement(642093..643499)
/gene="ybfM"
/locus_tag="SF0612"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706543.1"
/db_xref="GeneID:1027545"
/translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG
IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAEN
GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV
DYLHSIGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD
KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWIKADSQQGYFLQRMTPTYAS
SNGRLDIWWDNRSDFNANGEKAVFFSAMYDLKNWNLPGFAIGASYVYAWDAKPATWQS
NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI
FQDERDVKFMVIAPFTIF"
misc_feature complement(642213..643403)
/gene="ybfM"
/locus_tag="SF0612"
/note="outer membrane porin, OprD family; Region: OprD;
pfam03573"
/db_xref="CDD:460978"
gene complement(644078..645742)
/gene="glnS"
/locus_tag="SF0613"
/db_xref="GeneID:1023539"
CDS complement(644078..645742)
/gene="glnS"
/locus_tag="SF0613"
/note="Code: J; COG: COG0008"
/codon_start=1
/transl_table=11
/product="glutaminyl-tRNA synthetase"
/protein_id="NP_706544.1"
/db_xref="GeneID:1023539"
/translation="MSEAEARPTNFIRQIIDEDLASGKHITVHTRFPPEPNGYLHIGH
AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVDSIKNDVEWLGFHWSGNVRYSSD
YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE
DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRAD
FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG
RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL
KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
misc_feature complement(644087..645742)
/gene="glnS"
/locus_tag="SF0613"
/note="glutaminyl-tRNA synthetase; Provisional; Region:
PRK05347"
/db_xref="CDD:235424"
gene complement(645945..647891)
/gene="nagE"
/locus_tag="SF0614"
/db_xref="GeneID:1023546"
CDS complement(645945..647891)
/gene="nagE"
/locus_tag="SF0614"
/codon_start=1
/transl_table=11
/product="PTS system N-acetyl glucosamine specific
transporter subunits IIABC"
/protein_id="NP_706545.1"
/db_xref="GeneID:1023546"
/translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH
AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
QNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTDSCLTQL
ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI
VGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGD
VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
FSGLLIKAQGHVVAGQTPLYEIKK"
misc_feature complement(645948..647891)
/gene="nagE"
/locus_tag="SF0614"
/note="PTS system N-acetyl glucosamine specific
transporter subunits IIABC; Provisional; Region: PRK10255"
/db_xref="CDD:182338"
gene 648224..649024
/gene="nagB"
/locus_tag="SF0615"
/db_xref="GeneID:1023570"
CDS 648224..649024
/gene="nagB"
/locus_tag="SF0615"
/note="Code: G; COG: COG0363"
/codon_start=1
/transl_table=11
/product="glucosamine-6-phosphate deaminase"
/protein_id="NP_706546.1"
/db_xref="GeneID:1023570"
/translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMIMVLGSQKALALQAAVEG
CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
misc_feature 648224..649000
/gene="nagB"
/locus_tag="SF0615"
/note="glucosamine-6-phosphate isomerase; Region: nagB;
TIGR00502"
/db_xref="CDD:129593"
misc_feature order(648344..648355,648434..648439,648632..648637,
648650..648652,648656..648658,648737..648739,
648845..648847)
/gene="nagB"
/locus_tag="SF0615"
/note="active site"
/db_xref="CDD:238693"
misc_feature order(648671..648673,648677..648682,648704..648706,
648869..648889,648911..648919)
/gene="nagB"
/locus_tag="SF0615"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238693"
misc_feature order(648674..648679,648695..648706)
/gene="nagB"
/locus_tag="SF0615"
/note="allosteric site [active]"
/db_xref="CDD:238693"
misc_feature order(648710..648712,648719..648751,648761..648769)
/gene="nagB"
/locus_tag="SF0615"
/note="active site lid [active]"
/db_xref="CDD:238693"
misc_feature order(648725..648727,648839..648841,648851..648853,
648944..648946,648953..648964)
/gene="nagB"
/locus_tag="SF0615"
/note="hexamer (dimer of trimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:238693"
gene 649084..650232
/gene="nagA"
/locus_tag="SF0616"
/db_xref="GeneID:1023567"
CDS 649084..650232
/gene="nagA"
/locus_tag="SF0616"
/note="Code: G; COG: COG1820"
/codon_start=1
/transl_table=11
/product="N-acetylglucosamine-6-phosphate deacetylase"
/protein_id="NP_706547.1"
/db_xref="GeneID:1023567"
/translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR
SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
SDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
ATLYPARAIDVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ"
misc_feature 649084..650229
/gene="nagA"
/locus_tag="SF0616"
/note="N-acetylglucosamine-6-phosphate deacetylase;
Provisional; Region: nagA; PRK11170"
/db_xref="CDD:183010"
misc_feature order(649258..649260,649264..649266,649474..649476,
649507..649509,649666..649668,649729..649731,
649738..649743,649834..649836,649900..649902,
649999..650001)
/gene="nagA"
/locus_tag="SF0616"
/note="active site"
/db_xref="CDD:238434"
misc_feature order(649735..649737,649753..649755,649759..649764,
649768..649770,649789..649794,649831..649842,
649846..649851,649855..649860,649867..649869)
/gene="nagA"
/locus_tag="SF0616"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238434"
gene 650241..651461
/gene="nagC"
/locus_tag="SF0617"
/db_xref="GeneID:1023586"
CDS 650241..651461
/gene="nagC"
/locus_tag="SF0617"
/note="Code: K; COG: COG1940"
/codon_start=1
/transl_table=11
/product="nag (N-acetylglucosamine) operon transcriptional
repressor"
/protein_id="NP_706548.1"
/db_xref="GeneID:1023586"
/translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN
PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
AMLNGILLQHLLEN"
misc_feature 650313..650471
/gene="nagC"
/locus_tag="SF0617"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cl46857"
/db_xref="CDD:481197"
misc_feature 650496..651440
/gene="nagC"
/locus_tag="SF0617"
/note="ATPase-like domain of N-acetylglucosamine repressor
(NagC) and similar proteins; Region:
ASKHA_ATPase_ROK_NagC; cd24075"
/db_xref="CDD:466925"
gene 651509..652261
/gene="nagD"
/locus_tag="SF0618"
/pseudo
/db_xref="GeneID:1023541"
misc_feature 651509..652261
/gene="nagD"
/locus_tag="SF0618"
/note="Similar to Escherichia coli K12 N-acetylglucosamine
metabolism gi: 1786890 (251 aa). BLAST with identity of
97% in 251 aa. This CDS contains an in-frame stop codon.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 652658..654205
/gene="asnB"
/locus_tag="SF0619"
/db_xref="GeneID:1023587"
CDS 652658..654205
/gene="asnB"
/locus_tag="SF0619"
/note="Code: E; COG: COG0367"
/codon_start=1
/transl_table=11
/product="asparagine synthetase AsnB"
/protein_id="NP_706549.1"
/db_xref="GeneID:1023587"
/translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
ILAHERLSIVDVNAGAQPLYNQQKNHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS
EMKSLVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVHHEIHFTVQEGLDAIRDVIYH
IETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNVKELHEE
TVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKH
ILRECFESYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNT
PTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVG
VHQSAYK"
misc_feature 652658..654199
/gene="asnB"
/locus_tag="SF0619"
/note="asparagine synthetase B; Provisional; Region: asnB;
PRK09431"
/db_xref="CDD:236513"
gene 654586..654662
/locus_tag="SF4448"
/db_xref="GeneID:3161844"
tRNA 654586..654662
/locus_tag="SF4448"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161844"
gene 654672..654756
/locus_tag="SF4449"
/db_xref="GeneID:3161767"
tRNA 654672..654756
/locus_tag="SF4449"
/product="tRNA-Leu"
/codon_recognized="CUA"
/db_xref="GeneID:3161767"
gene 654780..654854
/locus_tag="SF4450"
/db_xref="GeneID:3161765"
tRNA 654780..654854
/locus_tag="SF4450"
/product="tRNA-Gln"
/codon_recognized="CAA"
/db_xref="GeneID:3161765"
gene 654889..654963
/locus_tag="SF4451"
/db_xref="GeneID:3161763"
tRNA 654889..654963
/locus_tag="SF4451"
/product="tRNA-Gln"
/codon_recognized="CAA"
/db_xref="GeneID:3161763"
gene 654979..655055
/locus_tag="SF4452"
/db_xref="GeneID:3161785"
tRNA 654979..655055
/locus_tag="SF4452"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161785"
gene 655103..655177
/locus_tag="SF4453"
/db_xref="GeneID:3161782"
tRNA 655103..655177
/locus_tag="SF4453"
/product="tRNA-Gln"
/codon_recognized="CAG"
/db_xref="GeneID:3161782"
gene 655215..655289
/locus_tag="SF4454"
/db_xref="GeneID:3161809"
tRNA 655215..655289
/locus_tag="SF4454"
/product="tRNA-Gln"
/codon_recognized="CAG"
/db_xref="GeneID:3161809"
gene complement(655443..656618)
/gene="ubiF"
/locus_tag="SF0620"
/db_xref="GeneID:1023566"
CDS complement(655443..656618)
/gene="ubiF"
/locus_tag="SF0620"
/note="Code: HC; COG: COG0654"
/codon_start=1
/transl_table=11
/product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
hydroxylase"
/protein_id="NP_706550.2"
/db_xref="GeneID:1023566"
/translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVA
DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL
PLLGYMVENTVLQQALWQALEAHPKVTLRVPTSLIALHRDNDLQELELKGGETIRAKL
VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
FDNWASLVWYDSPTRIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
misc_feature complement(655446..656618)
/gene="ubiF"
/locus_tag="SF0620"
/note="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
hydroxylase; Reviewed; Region: ubiF; PRK08020"
/db_xref="CDD:181199"
gene 656764..658188
/gene="yleA"
/locus_tag="SF0621"
/db_xref="GeneID:1023582"
CDS 656764..658188
/gene="yleA"
/locus_tag="SF0621"
/note="Code: J; COG: COG0621"
/codon_start=1
/transl_table=11
/product="(dimethylallyl)adenosine tRNA
methylthiotransferase"
/protein_id="NP_706551.1"
/db_xref="GeneID:1023582"
/translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSF
ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY
SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRM
AETPESVIARTRKENDLGVGYYQP"
misc_feature 656773..658083
/gene="yleA"
/locus_tag="SF0621"
/note="tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase
enzyme MiaB; Region: miaB-methiolase; TIGR01574"
/db_xref="CDD:273700"
gene 658302..659381
/gene="ybeZ"
/locus_tag="SF0622"
/db_xref="GeneID:1023553"
CDS 658302..659381
/gene="ybeZ"
/locus_tag="SF0622"
/note="Code: T; COG: COG1702"
/codon_start=1
/transl_table=11
/product="pho regulon ATP-binding protein"
/protein_id="NP_706552.2"
/db_xref="GeneID:1023553"
/translation="MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQ
LERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAI
KEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFE
MLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNS
KAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYE
AWEEAEQKRKAALAAERKREEQEQK"
misc_feature 658350..659336
/gene="ybeZ"
/locus_tag="SF0622"
/note="Phosphate starvation-inducible protein PhoH,
predicted ATPase [Signal transduction mechanisms]; Region:
PhoH; COG1702"
/db_xref="CDD:441308"
gene 659378..659845
/gene="ybeY"
/locus_tag="SF0623"
/db_xref="GeneID:1023572"
CDS 659378..659845
/gene="ybeY"
/locus_tag="SF0623"
/note="Code: R; COG: COG0319"
/codon_start=1
/transl_table=11
/product="metal-binding heat shock protein"
/protein_id="NP_706553.1"
/db_xref="GeneID:1023572"
/translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR
VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE"
misc_feature 659393..659821
/gene="ybeY"
/locus_tag="SF0623"
/note="ssRNA-specific RNase YbeY, 16S rRNA maturation
enzyme [Translation, ribosomal structure and biogenesis];
Region: YbeY; COG0319"
/db_xref="CDD:440088"
gene 659935..660813
/gene="ybeX"
/locus_tag="SF0624"
/db_xref="GeneID:1027544"
CDS 659935..660813
/gene="ybeX"
/locus_tag="SF0624"
/note="Code: R; COG: COG1253"
/codon_start=1
/transl_table=11
/product="magnesium/cobalt efflux protein CorC"
/protein_id="NP_706554.1"
/db_xref="GeneID:1027544"
/translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
VHVKIPDDSPQPKLDE"
misc_feature 659935..660810
/gene="ybeX"
/locus_tag="SF0624"
/note="magnesium/cobalt transporter CorC; Region:
PRK15094"
/db_xref="CDD:185050"
gene 660838..662376
/gene="lnt"
/locus_tag="SF0625"
/db_xref="GeneID:1023577"
CDS 660838..662376
/gene="lnt"
/locus_tag="SF0625"
/note="Code: M; COG: COG0815"
/codon_start=1
/transl_table=11
/product="apolipoprotein N-acyltransferase"
/protein_id="NP_706555.1"
/db_xref="GeneID:1023577"
/translation="MDFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS
LYTGLFAGVLSRLWPKTTWLRVAIATPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
KGLAPLMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
EKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN
KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIIL
AEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
VIGPQGEIQAMIPQFAREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
QRRK"
misc_feature 660862..662373
/gene="lnt"
/locus_tag="SF0625"
/note="apolipoprotein N-acyltransferase; Reviewed; Region:
lnt; PRK00302"
/db_xref="CDD:234721"
gene 662773..663681
/gene="ybeJ"
/locus_tag="SF0626"
/db_xref="GeneID:1023607"
CDS 662773..663681
/gene="ybeJ"
/locus_tag="SF0626"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="glutamate and aspartate transporter subunit"
/protein_id="NP_706556.2"
/db_xref="GeneID:1023607"
/translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV
GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL
QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTS
GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK
PDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP
KNLNMNFELSDEMKALFKEPNDKALN"
misc_feature 662773..663678
/gene="ybeJ"
/locus_tag="SF0626"
/note="glutamate and aspartate transporter subunit;
Provisional; Region: PRK10797"
/db_xref="CDD:236763"
gene 663851..664591
/gene="gltJ"
/locus_tag="SF0627"
/db_xref="GeneID:1023624"
CDS 663851..664591
/gene="gltJ"
/locus_tag="SF0627"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="glutamate/aspartate transport system permease"
/protein_id="NP_706557.1"
/db_xref="GeneID:1023624"
/translation="MSIDWNWGIFLQQAPFGNTTYLGWVWSGFQVTIALSICAWIIAF
LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA
ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVL
LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
YVLINAFIMLVMTLVERKVRLPGNMGGK"
misc_feature 663860..664570
/gene="gltJ"
/locus_tag="SF0627"
/note="ABC-type amino acid transport system, permease
component [Amino acid transport and metabolism]; Region:
HisM; COG0765"
/db_xref="CDD:440528"
gene 664591..665265
/gene="gltK"
/locus_tag="SF0628"
/db_xref="GeneID:1026097"
CDS 664591..665265
/gene="gltK"
/locus_tag="SF0628"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="glutamate/aspartate transport system permease
GltK"
/protein_id="NP_706558.1"
/db_xref="GeneID:1026097"
/translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
RLSSFAPVSWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY
LKRRTA"
misc_feature 664591..665262
/gene="gltK"
/locus_tag="SF0628"
/note="glutamate/aspartate ABC transporter permease GltK;
Region: PRK15107"
/db_xref="CDD:185062"
gene 665265..665990
/gene="gltL"
/locus_tag="SF0629"
/db_xref="GeneID:1023629"
CDS 665265..665990
/gene="gltL"
/locus_tag="SF0629"
/note="Code: E; COG: COG1126"
/codon_start=1
/transl_table=11
/product="glutamate/aspartate ABC transporter ATP-binding
protein"
/protein_id="NP_706559.1"
/db_xref="GeneID:1023629"
/translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMAPIAMLF
DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
PKDAFFDDPKSDRAKDFLAKILH"
misc_feature 665265..665981
/gene="gltL"
/locus_tag="SF0629"
/note="ABC-type polar amino acid transport system, ATPase
component [Amino acid transport and metabolism]; Region:
GlnQ; COG1126"
/db_xref="CDD:440743"
gene 666108..667043
/gene="rihA"
/locus_tag="SF0630"
/db_xref="GeneID:1023592"
CDS 666108..667043
/gene="rihA"
/locus_tag="SF0630"
/note="Code: F; COG: COG1957"
/codon_start=1
/transl_table=11
/product="ribonucleoside hydrolase 1"
/protein_id="NP_706560.2"
/db_xref="GeneID:1023592"
/translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK
TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAE
LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVV
DYYYLTGNKPNATVIVDVDRQGFVDLLADRLKFYA"
misc_feature 666108..667040
/gene="rihA"
/locus_tag="SF0630"
/note="ribonucleoside hydrolase 1; Provisional; Region:
rihA; PRK10443"
/db_xref="CDD:182465"
misc_feature order(666135..666137,666147..666152,666222..666224,
666348..666350,666477..666479,666579..666581,
666597..666599,666603..666605,666828..666830)
/gene="rihA"
/locus_tag="SF0630"
/note="active site"
/db_xref="CDD:239117"
misc_feature order(666318..666320,666510..666512,666633..666635,
666897..666899,666903..666908,666915..666917)
/gene="rihA"
/locus_tag="SF0630"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:239117"
gene 667127..668789
/gene="ybeW"
/locus_tag="SF0631"
/pseudo
/db_xref="GeneID:1023579"
misc_feature 667127..668789
/gene="ybeW"
/locus_tag="SF0631"
/note="Similar to Escherichia coli K12 dnaK protein gi:
1786870 (557 aa). BLAST with identity of 98% in 554 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(668857..670308)
/gene="ybeV"
/locus_tag="SF0632"
/db_xref="GeneID:1023578"
CDS complement(668857..670308)
/gene="ybeV"
/locus_tag="SF0632"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706561.1"
/db_xref="GeneID:1023578"
/translation="MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQ
AYEEALRLAVNPVEEADDEEKDATAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNT
WNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI
QAGDCFDFLSLLEYPVALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKL
HRKLLRWYSSVQTGMVELIPVAKQWQAEEPESEDARYYQCAQRLYCGEGESLLADLGA
YWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQPLKYVPGESARTRL
LWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEEDSPLLDLYRVAEQVVL
EAFPKQEMLARLNTRLEGGDAHPLEAIITRMLLTKVKLEPEDEDVDEPTPENHEEKND
EGEKPQSITSIIKISLTVLVIGYALGKIAMLFS"
misc_feature complement(<670156..670308)
/gene="ybeV"
/locus_tag="SF0632"
/note="Curved DNA-binding protein CbpA, contains a
DnaJ-like domain [Transcription]; Region: CbpA; COG2214"
/db_xref="CDD:441816"
gene complement(670305..671012)
/gene="ybeU"
/locus_tag="SF0633"
/db_xref="GeneID:1023591"
CDS complement(670305..671012)
/gene="ybeU"
/locus_tag="SF0633"
/codon_start=1
/transl_table=11
/product="tRNA ligase"
/protein_id="NP_706562.1"
/db_xref="GeneID:1023591"
/translation="MNKEEQYLLFALSAPMEILNQSCKPAHDSPKMYTGIKEFDLSSS
WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWQRSSPEEWKALIAGGSERGLIYTQFV
AQTAMCCGEGGIKAWDYVRMGFLSRAGVLNNWLTEEESLWLQSRVYARAHHYYHSWMH
YFSAYSLGRLYWQSSQCEDNASLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQP
LTVQPECPVTLKDVSDL"
misc_feature complement(670365..670895)
/gene="ybeU"
/locus_tag="SF0633"
/note="Protein of unknown function (DUF1266); Region:
DUF1266; pfam06889"
/db_xref="CDD:462031"
gene 671114..671668
/gene="ybeT"
/locus_tag="SF0634"
/db_xref="GeneID:1023621"
CDS 671114..671668
/gene="ybeT"
/locus_tag="SF0634"
/note="Code: R; COG: COG0790"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706563.1"
/db_xref="GeneID:1023621"
/translation="MNKKLMYIFAIFIVAAITCISQPKKTMLRDKAMVNYAFDYLRSP
GSLPLTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRA
QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGTGINVNHYESQ
KWLKLAAKQHYKNAERLLAGLPAH"
misc_feature <671204..671656
/gene="ybeT"
/locus_tag="SF0634"
/note="TPR repeat [General function prediction only];
Region: TPR; COG0790"
/db_xref="CDD:440553"
misc_feature 671360..671449
/gene="ybeT"
/locus_tag="SF0634"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
misc_feature 671468..671557
/gene="ybeT"
/locus_tag="SF0634"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
gene complement(671678..673105)
/gene="ybeS"
/locus_tag="SF0635"
/db_xref="GeneID:1023604"
CDS complement(671678..673105)
/gene="ybeS"
/locus_tag="SF0635"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706564.1"
/db_xref="GeneID:1023604"
/translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQ
AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY
CSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAI
AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKL
HRNLLRWYSASRLGIPELLDYARSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCY
YWREYPSTQADALMLQWCRQHRVYYYPLVVMMIEARDLVNDQGKPLLYVPGDSARTRF
HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHPLWPLYLVAKQLVQASQPT
EESLMPIVSRLDAEDRCPLEALIIRRLLIQAANFTGQETVEPEPQPQPMPVDDGGLGC
LGVIKIIFYIFIFAGLIGKILHLFG"
misc_feature complement(672965..673102)
/gene="ybeS"
/locus_tag="SF0635"
/note="DnaJ molecular chaperone homology domain; Region:
DnaJ; smart00271"
/db_xref="CDD:197617"
misc_feature complement(order(672974..672979,672986..672991,
672998..673000,673010..673015))
/gene="ybeS"
/locus_tag="SF0635"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
gene complement(673102..673809)
/gene="ybeR"
/locus_tag="SF0636"
/db_xref="GeneID:1023625"
CDS complement(673102..673809)
/gene="ybeR"
/locus_tag="SF0636"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706565.1"
/db_xref="GeneID:1023625"
/translation="MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS
WGIDDRDDLLRIIHRMIENGHADRLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV
ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQP
LADYPTCPETLKDMSDL"
misc_feature complement(673162..673692)
/gene="ybeR"
/locus_tag="SF0636"
/note="Protein of unknown function (DUF1266); Region:
DUF1266; pfam06889"
/db_xref="CDD:462031"
gene 673967..674950
/gene="ybeQ"
/locus_tag="SF0637"
/db_xref="GeneID:1023616"
CDS 673967..674950
/gene="ybeQ"
/locus_tag="SF0637"
/note="Code: R; COG: COG0790"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706566.1"
/db_xref="GeneID:1023616"
/translation="MIMIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAID
SPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFA
SNALGWILDRGEDPNYKEAVTWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFW
YKQAALQGHSYAQDNLADLYKDGEGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNA
GEGVDQDYKQAMYWYLKAAAQESVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECN
DATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEALL"
misc_feature 674048..674155
/gene="ybeQ"
/locus_tag="SF0637"
/note="Sel1-like repeats; Region: SEL1; smart00671"
/db_xref="CDD:214772"
misc_feature 674105..674194
/gene="ybeQ"
/locus_tag="SF0637"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
misc_feature 674159..674263
/gene="ybeQ"
/locus_tag="SF0637"
/note="Sel1-like repeats; Region: SEL1; smart00671"
/db_xref="CDD:214772"
misc_feature 674213..674302
/gene="ybeQ"
/locus_tag="SF0637"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
misc_feature 674219..674887
/gene="ybeQ"
/locus_tag="SF0637"
/note="TPR repeat [General function prediction only];
Region: TPR; COG0790"
/db_xref="CDD:440553"
misc_feature 674315..674404
/gene="ybeQ"
/locus_tag="SF0637"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
misc_feature 674423..674512
/gene="ybeQ"
/locus_tag="SF0637"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
misc_feature 674531..674620
/gene="ybeQ"
/locus_tag="SF0637"
/note="SLR repeat [structural motif]; Region: SLR repeat"
/db_xref="CDD:276807"
gene complement(675020..675502)
/gene="ybeL"
/locus_tag="SF0638"
/db_xref="GeneID:1023611"
CDS complement(675020..675502)
/gene="ybeL"
/locus_tag="SF0638"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706567.1"
/db_xref="GeneID:1023611"
/translation="MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELT
RTEIDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
EIFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP
"
misc_feature complement(675023..675502)
/gene="ybeL"
/locus_tag="SF0638"
/note="zinc ribbon-containing protein; Region: PRK11032"
/db_xref="CDD:182915"
gene 675737..678319
/gene="leuS"
/locus_tag="SF0639"
/db_xref="GeneID:1023618"
CDS 675737..678319
/gene="leuS"
/locus_tag="SF0639"
/note="Code: J; COG: COG0495"
/codon_start=1
/transl_table=11
/product="leucyl-tRNA synthetase"
/protein_id="NP_706568.2"
/db_xref="GeneID:1023618"
/translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKT
MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA
VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPEY
KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
TDGEQDRALMQEALQAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
LVVG"
misc_feature 675737..678316
/gene="leuS"
/locus_tag="SF0639"
/note="Leucyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: LeuS; COG0495"
/db_xref="CDD:440261"
gene 678334..678915
/gene="rlpB"
/locus_tag="SF0640"
/db_xref="GeneID:1023631"
CDS 678334..678915
/gene="rlpB"
/locus_tag="SF0640"
/note="Code: M; COG: COG2980"
/codon_start=1
/transl_table=11
/product="LPS-assembly lipoprotein RlpB"
/protein_id="NP_706569.1"
/db_xref="GeneID:1023631"
/translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
SIRAADIRSDEEQTSTTTDTPATPARVSTMLGN"
misc_feature 678334..678900
/gene="rlpB"
/locus_tag="SF0640"
/note="LPS-assembly lipoprotein RlpB; Provisional; Region:
PRK10796"
/db_xref="CDD:236762"
gene 678915..679946
/gene="holA"
/locus_tag="SF0641"
/db_xref="GeneID:1023606"
CDS 678915..679946
/gene="holA"
/locus_tag="SF0641"
/note="Code: L; COG: COG1466"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit delta"
/protein_id="NP_706570.1"
/db_xref="GeneID:1023606"
/translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAVRAKQLNL
ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
DALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
RVWQNRRGMMGEALNRLSQPQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK
PLADVFIDG"
misc_feature 679008..679910
/gene="holA"
/locus_tag="SF0641"
/note="DNA polymerase III, delta subunit; Region: holA;
TIGR01128"
/db_xref="CDD:273455"
gene 679948..680589
/gene="nadD"
/locus_tag="SF0642"
/db_xref="GeneID:1027549"
CDS 679948..680589
/gene="nadD"
/locus_tag="SF0642"
/note="Code: H; COG: COG1057"
/codon_start=1
/transl_table=11
/product="nicotinic acid mononucleotide
adenylyltransferase"
/protein_id="NP_706571.1"
/db_xref="GeneID:1027549"
/translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP
HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL
AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPED
LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
misc_feature 679948..680586
/gene="nadD"
/locus_tag="SF0642"
/note="nicotinate-nucleotide adenylyltransferase; Region:
nadD; PRK00071"
/db_xref="CDD:234611"
misc_feature order(679969..679983,679993..679995,679999..680004,
680011..680013,680074..680076,680194..680202,
680257..680259,680263..680268,680272..680277,
680296..680301,680344..680349,680482..680484)
/gene="nadD"
/locus_tag="SF0642"
/note="active site"
/db_xref="CDD:185680"
misc_feature 679993..680004
/gene="nadD"
/locus_tag="SF0642"
/note="(T/H)XGH motif; other site"
/db_xref="CDD:185680"
gene 680613..681224
/gene="phpB"
/locus_tag="SF0643"
/db_xref="GeneID:1023628"
CDS 680613..681224
/gene="phpB"
/locus_tag="SF0643"
/note="'Code: G; COG: COG0406; similar to Salmonella cobC,
a phosphohistidine protein'"
/codon_start=1
/transl_table=11
/product="alpha-ribazole-5'-phosphate phosphatase"
/protein_id="NP_706572.2"
/db_xref="GeneID:1023628"
/translation="MRLWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLDD
VSFDLVLCSELERAQHTARLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLMQEDAEN
YSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEYQHYQNILIVSHQGVLSLLIARL
IGMPAESMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVENA"
misc_feature 680613..681206
/gene="phpB"
/locus_tag="SF0643"
/note="adenosylcobalamin/alpha-ribazole phosphatase;
Region: PRK15004"
/db_xref="CDD:184966"
misc_feature order(680631..680636,680781..680783,681057..681062)
/gene="phpB"
/locus_tag="SF0643"
/note="catalytic core [active]"
/db_xref="CDD:132718"
gene 681484..681801
/gene="ybeB"
/locus_tag="SF0644"
/db_xref="GeneID:1026104"
CDS 681484..681801
/gene="ybeB"
/locus_tag="SF0644"
/note="Code: S; COG: COG0799"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706573.2"
/db_xref="GeneID:1026104"
/translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
LWS"
misc_feature 681484..681798
/gene="ybeB"
/locus_tag="SF0644"
/note="ribosome silencing factor; Region: PRK11538"
/db_xref="CDD:183184"
gene 681805..682272
/gene="ybeA"
/locus_tag="SF0645"
/db_xref="GeneID:1023615"
CDS 681805..682272
/gene="ybeA"
/locus_tag="SF0645"
/note="Code: S; COG: COG1576"
/codon_start=1
/transl_table=11
/product="23S rRNA
(pseudouridine(1915)-N(3))-methyltransferase RlmH"
/protein_id="NP_706574.1"
/db_xref="GeneID:1023615"
/translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
misc_feature 681808..682266
/gene="ybeA"
/locus_tag="SF0645"
/note="rRNA large subunit m3Psi methyltransferase RlmH;
Region: tRNA_RlmH_YbeA; TIGR00246"
/db_xref="CDD:129349"
misc_feature order(681844..681852,681856..681861,681868..681873,
682036..682047,682162..682164,682168..682188,
682195..682197,682204..682209,682216..682221,
682228..682230)
/gene="ybeA"
/locus_tag="SF0645"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:349954"
misc_feature order(682018..682026,682108..682119,682123..682125,
682162..682173,682177..682185,682198..682200)
/gene="ybeA"
/locus_tag="SF0645"
/note="SAM binding site [chemical binding]; other site"
/db_xref="CDD:349954"
gene 682303..684204
/gene="mrdA"
/locus_tag="SF0646"
/db_xref="GeneID:1023600"
CDS 682303..684204
/gene="mrdA"
/locus_tag="SF0646"
/note="Code: M; COG: COG0768"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein 2"
/protein_id="NP_706575.1"
/db_xref="GeneID:1023600"
/translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
EPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
SGYWELAKDGMYGVANRPNGTANKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
PAVAAAEDH"
misc_feature 682303..684198
/gene="mrdA"
/locus_tag="SF0646"
/note="penicillin-binding protein 2; Provisional; Region:
PRK10795"
/db_xref="CDD:236761"
gene 684207..685319
/gene="mrdB"
/locus_tag="SF0647"
/db_xref="GeneID:1023601"
CDS 684207..685319
/gene="mrdB"
/locus_tag="SF0647"
/note="Code: D; COG: COG0772"
/codon_start=1
/transl_table=11
/product="cell wall shape-determining protein"
/protein_id="NP_706576.1"
/db_xref="GeneID:1023601"
/translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
misc_feature 684207..685316
/gene="mrdB"
/locus_tag="SF0647"
/note="rod shape-determining protein RodA; Region:
PRK10794"
/db_xref="CDD:182737"
gene 685330..686418
/gene="rlpA"
/locus_tag="SF0648"
/db_xref="GeneID:1023612"
CDS 685330..686418
/gene="rlpA"
/locus_tag="SF0648"
/note="Code: M; COG: COG0797"
/codon_start=1
/transl_table=11
/product="rare lipoprotein A"
/protein_id="NP_706577.1"
/db_xref="GeneID:1023612"
/translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
PTKLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP
VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTASSTTPATSPA
MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
FASKAEASTLQQRLQTEAQLQSFITTAQ"
misc_feature 685330..686415
/gene="rlpA"
/locus_tag="SF0648"
/note="endolytic peptidoglycan transglycosylase RlpA;
Region: PRK10672"
/db_xref="CDD:236733"
gene 686557..687768
/gene="dacA"
/locus_tag="SF0649"
/db_xref="GeneID:1023603"
CDS 686557..687768
/gene="dacA"
/locus_tag="SF0649"
/note="Code: M; COG: COG1686"
/codon_start=1
/transl_table=11
/product="D-alanyl-D-alanine carboxypeptidase subunit A"
/protein_id="NP_706578.1"
/db_xref="GeneID:1023603"
/translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI
DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFSDSDRASLGVDKDVYLTIPRGRM
KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
YIKLMFHHWFG"
misc_feature 686557..687765
/gene="dacA"
/locus_tag="SF0649"
/note="D-alanyl-D-alanine carboxypeptidase fraction A;
Provisional; Region: PRK10793"
/db_xref="CDD:182736"
gene 687879..688142
/gene="ybeD"
/locus_tag="SF0650"
/db_xref="GeneID:1023602"
CDS 687879..688142
/gene="ybeD"
/locus_tag="SF0650"
/note="Code: S; COG: COG2921"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706579.1"
/db_xref="GeneID:1023602"
/translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
PTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL"
misc_feature 687879..688139
/gene="ybeD"
/locus_tag="SF0650"
/note="hypothetical protein; Provisional; Region:
PRK04998"
/db_xref="CDD:179912"
gene 688309..688884
/gene="lipB"
/locus_tag="SF0651"
/db_xref="GeneID:1027547"
CDS 688309..688884
/gene="lipB"
/locus_tag="SF0651"
/note="Code: H; COG: COG0321"
/codon_start=1
/transl_table=11
/product="lipoate biosynthesis protein LipB"
/protein_id="NP_706580.4"
/db_xref="GeneID:1027547"
/translation="MHEFTDTRDNSTLDEIWLVEHYPVFTQGQAGKAEHILMPGDIPV
IQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEAHPRA
DAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKISQW
KPEATTNNIAPRLLENILALLNNPDFEYITA"
misc_feature 688309..688878
/gene="lipB"
/locus_tag="SF0651"
/note="lipoyl(octanoyl) transferase LipB; Region:
PRK14342"
/db_xref="CDD:237681"
misc_feature order(688453..688455,688459..688470,688474..688476,
688498..688500,688645..688647,688654..688662,
688693..688701)
/gene="lipB"
/locus_tag="SF0651"
/note="active site"
/db_xref="CDD:319743"
gene 689296..690096
/gene="ybeF"
/locus_tag="SF0652"
/db_xref="GeneID:1023583"
CDS 689296..690096
/gene="ybeF"
/locus_tag="SF0652"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator"
/protein_id="NP_706581.2"
/db_xref="GeneID:1023583"
/translation="MLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY
ISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPI
SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRKGNPLLSLEDDRETIDN
AAHVLLLPEGQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYN
LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFILRDPILHGVIDVIRNAF"
misc_feature 689296..690093
/gene="ybeF"
/locus_tag="SF0652"
/note="DNA-binding transcriptional regulator; Region:
PRK11482"
/db_xref="CDD:183159"
gene 690305..691270
/gene="lipA"
/locus_tag="SF0653"
/db_xref="GeneID:1023613"
CDS 690305..691270
/gene="lipA"
/locus_tag="SF0653"
/note="Code: H; COG: COG0320"
/codon_start=1
/transl_table=11
/product="lipoyl synthase"
/protein_id="NP_706582.1"
/db_xref="GeneID:1023613"
/translation="MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIK
LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
misc_feature 690368..691267
/gene="lipA"
/locus_tag="SF0653"
/note="Lipoate synthase [Coenzyme transport and
metabolism]; Region: LipA; COG0320"
/db_xref="CDD:440089"
gene complement(691371..691574)
/gene="tatE"
/locus_tag="SF0654"
/db_xref="GeneID:1023610"
CDS complement(691371..691574)
/gene="tatE"
/locus_tag="SF0654"
/note="Code: N; COG: COG1826"
/codon_start=1
/transl_table=11
/product="twin arginine translocase E"
/protein_id="NP_706583.1"
/db_xref="GeneID:1023610"
/translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
DDDAAAKKGADVDLQAEKLSHKE"
misc_feature complement(691374..691574)
/gene="tatE"
/locus_tag="SF0654"
/note="twin-arginine translocase subunit TatE; Region:
tatE; PRK03625"
/db_xref="CDD:179612"
gene complement(691703..692491)
/gene="ybeM"
/locus_tag="SF0655"
/db_xref="GeneID:1023655"
CDS complement(691703..692491)
/gene="ybeM"
/locus_tag="SF0655"
/note="Code: R; COG: COG0388"
/codon_start=1
/transl_table=11
/product="amidase"
/protein_id="NP_706584.3"
/db_xref="GeneID:1023655"
/translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
RDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHLPSTPGRAWNMLVALQAG
NIVARYAKLHLYDAFAIQESRHVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQA
LQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPF
GVTIAAASEMPALIMAEVTPERVRQVRAQLPILNNRRFAPPQLL"
misc_feature complement(691709..692485)
/gene="ybeM"
/locus_tag="SF0655"
/note="deaminated glutathione amidase; Region:
de_GSH_amidase; NF033621"
/db_xref="CDD:468114"
gene 692584..692967
/gene="ccrB"
/locus_tag="SF0656"
/db_xref="GeneID:1023643"
CDS 692584..692967
/gene="ccrB"
/locus_tag="SF0656"
/note="Code: D; COG: COG0239"
/codon_start=1
/transl_table=11
/product="chromosome condensation membrane protein"
/protein_id="NP_706585.1"
/db_xref="GeneID:1023643"
/translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIG
AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
VFVNLLGSFAMTALAFWLFSASTVH"
misc_feature 692584..692952
/gene="ccrB"
/locus_tag="SF0656"
/note="fluoride efflux transporter CrcB; Region: PRK14196"
/db_xref="CDD:184564"
gene complement(693021..693230)
/gene="cspE"
/locus_tag="SF0657"
/db_xref="GeneID:1023640"
CDS complement(693021..693230)
/gene="cspE"
/locus_tag="SF0657"
/note="Code: K; COG: COG1278"
/codon_start=1
/transl_table=11
/product="cold shock protein CspE"
/protein_id="NP_706586.2"
/db_xref="GeneID:1023640"
/translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
AEGQRVEFEITNGAKGPSAANVIAL"
misc_feature complement(693024..693230)
/gene="cspE"
/locus_tag="SF0657"
/note="cold shock-like protein CspE; Region: cspE;
PRK09507"
/db_xref="CDD:169931"
misc_feature complement(order(693054..693056,693141..693143,
693174..693176,693201..693203))
/gene="cspE"
/locus_tag="SF0657"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:239905"
misc_feature complement(order(693135..693146,693165..693185))
/gene="cspE"
/locus_tag="SF0657"
/note="RNA-binding motif [active]"
/db_xref="CDD:239905"
gene complement(693405..693965)
/gene="pagP"
/locus_tag="SF0658"
/db_xref="GeneID:1023639"
CDS complement(693405..693965)
/gene="pagP"
/locus_tag="SF0658"
/codon_start=1
/transl_table=11
/product="phospholipid:lipid A palmitoyltransferase"
/protein_id="NP_706587.1"
/db_xref="GeneID:1023639"
/translation="MNVSKYVAIFSFVFIQLISVGKVFANADERMTTFRENIAQTWQQ
PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS
WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP
VTFQMTYIPGTYNNGNVYFAWMRFQF"
misc_feature complement(693408..693959)
/gene="pagP"
/locus_tag="SF0658"
/note="lipid IV(A) palmitoyltransferase PagP; Region:
pagP; PRK11045"
/db_xref="CDD:236829"
gene 694554..695939
/gene="dcuC"
/locus_tag="SF0659"
/db_xref="GeneID:1023658"
CDS 694554..695939
/gene="dcuC"
/locus_tag="SF0659"
/note="Code: C; COG: COG3069"
/codon_start=1
/transl_table=11
/product="C4-dicarboxylate transporter DcuC"
/protein_id="NP_706588.2"
/db_xref="GeneID:1023658"
/translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
VPGTAAAVTGK"
misc_feature 694554..695918
/gene="dcuC"
/locus_tag="SF0659"
/note="C4-dicarboxylate transporter DcuC; Provisional;
Region: dcuC; PRK10654"
/db_xref="CDD:182621"
gene complement(695980..696321)
/gene="citB"
/locus_tag="SF0660"
/pseudo
/db_xref="GeneID:1023619"
misc_feature complement(695980..696321)
/gene="citB"
/locus_tag="SF0660"
/note="Similar to Escherichia coli K12 sequence similarity
to Shigella regulator gi: 1786838 (227 aa). BLAST with
identity of 98% in 113 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(696659..697168)
/locus_tag="SF0661"
/db_xref="GeneID:1023620"
CDS complement(696659..697168)
/locus_tag="SF0661"
/codon_start=1
/transl_table=11
/product="repressor protein"
/protein_id="NP_706589.1"
/db_xref="GeneID:1023620"
/translation="MKSANEINQWMTPKQITELDGMPGTIQGVHKRAKKEGWPKRSQE
GRRGPGVEYIPAIPAMQKIAIEEMNADTLKMFSLLINKLGENEVREIELNMAKYGLSG
LMQERPSISVDTLLATLGIDRQTLQTALALHKLPPETRQEILSMYGVHKQEEPVAPLL
EPQDAKKAV"
misc_feature complement(696755..697120)
/locus_tag="SF0661"
/note="Helix-Turn-Helix DNA binding domain of
transcription regulators from the MerR superfamily;
Region: HTH_MerR-SF; cl02600"
/db_xref="CDD:470628"
gene 697731..699185
/locus_tag="SF0662"
/db_xref="GeneID:1026112"
CDS 697731..699185
/locus_tag="SF0662"
/note="Code: L; COG: COG1425"
/codon_start=1
/transl_table=11
/product="phage transposase"
/protein_id="NP_706590.2"
/db_xref="GeneID:1026112"
/translation="MLQQGKFKTSQGCFEIARPTLEAHDYDREALWSKWDKASDSQRS
LAEKWLPSIQATDEMLNQGISTKTAFATVAGHYQVSASTLRDKYYQVQKFAKPDWAAA
LVDGRGASRRNVHKSEFDEDAWQFLIADYLRPEKPAFRKCYERLELAAREHGWSIPSR
ATAFRRIQQLDEAMVVACREGEHALMHLIPAQQRTVEHLDAMQWINGDGYLHNVFVRW
FNGDVIRPKTWFWQDVKTRKILGWRCDVSENIDSIRLSFMDVVTRYSIPEDFHITIDN
TRGAANKWLTGGAPNRYRFKVKEDDPKGLFLLMGAKMHWTSVVAGKGWGQAKPVERAF
GVGGLEEYVDKHPALAGAYTGPNPQAKPDNYGDHAVDAELFLKTFAEGVAMFNARTGR
ETEMCGGKLSFDDVFEREYARTIVRKPTEEQKRMLLLPAEAVNVSRKGEFTLKVGGSL
KGAKNVYYNMALMNAGVKKVVVRFDPQQLHSTVY"
misc_feature <697731..697976
/locus_tag="SF0662"
/note="Helix-Turn-Helix DNA binding domain of
transcription regulators from the MerR superfamily;
Region: HTH_MerR-SF; cl02600"
/db_xref="CDD:470628"
misc_feature 697992..698315
/locus_tag="SF0662"
/note="Mu DNA binding, I gamma subdomain; Region:
HTH_Tnp_Mu_2; pfam09039"
/db_xref="CDD:370256"
misc_feature 698316..698966
/locus_tag="SF0662"
/note="DDE superfamily endonuclease; Region: DDE_3;
cl46863"
/db_xref="CDD:481203"
misc_feature 699003..699182
/locus_tag="SF0662"
/note="Mu transposase, C-terminal; Region: Mu-transpos_C;
pfam09299"
/db_xref="CDD:430512"
mobile_element 699183..700446
/mobile_element_type="insertion sequence:IS600"
gene 699247..699549
/locus_tag="SF0663"
/db_xref="GeneID:1023651"
CDS 699247..699549
/locus_tag="SF0663"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706591.1"
/db_xref="GeneID:1023651"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 699247..699519
/locus_tag="SF0663"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 699585..700403
/locus_tag="SF0664"
/db_xref="GeneID:1023649"
CDS 699585..700403
/locus_tag="SF0664"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706592.1"
/db_xref="GeneID:1023649"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLACLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <699585..700376
/locus_tag="SF0664"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 700415..700690
/locus_tag="SF0665"
/db_xref="GeneID:1023644"
CDS 700415..700690
/locus_tag="SF0665"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706593.1"
/db_xref="GeneID:1023644"
/translation="MVVSAIASTPQFFGIFYLVTRVCGFANGYFRVRTSEPVRGNVFL
HNMTAFNKLAPRTVGKREHKRGMYVYYCIIFCHRVILNGPARGPCGC"
gene complement(700687..701628)
/locus_tag="SF0666"
/db_xref="GeneID:1023638"
CDS complement(700687..701628)
/locus_tag="SF0666"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706594.1"
/db_xref="GeneID:1023638"
/translation="MITFDQATVDSSGAFLIGELERLDQTLNLPLVGYTWSRDIQLRE
DASIADDISSWTNTSFAAAGTGANPNGKNWVGKDSTAIAGVNVDIGKSGNPLNLWGME
LGWTVIELQAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDSALNLKGLVTLDGVPV
NNAAKTWATSTPDEIRASINQVLSDAWAASGYSVVPRDLLIPPEQFALLSSIIVSSAG
NQSLLTNLQTNTISYHQNGVPLNIRAVKWLKGRGVGNKDRIVAYTNDKKYVRYPLVPL
QSVPVQYRGLYQIVTYYGKLGAVEPVYKETISYVDGI"
misc_feature complement(700690..701412)
/locus_tag="SF0666"
/note="Uncharacterized protein conserved in bacteria
(DUF2184); Region: DUF2184; pfam09950"
/db_xref="CDD:462931"
gene complement(701640..702129)
/locus_tag="SF0667"
/pseudogene="unknown"
/db_xref="GeneID:1023652"
gene complement(702133..703353)
/locus_tag="SF0668"
/db_xref="GeneID:1023642"
CDS complement(702133..703353)
/locus_tag="SF0668"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706596.1"
/db_xref="GeneID:1023642"
/translation="MKYFFETRLGETRYRLADGSLLCKDVPIGRTGKQLYGADDLPKL
KPDKFVEIVVTRSPEQVFHPATLASFEGMSITILHPEDENGNVRLVNPENWKVLAVGH
LQNVRRGTGEQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQTEPGKAEQVDI
TGNHVALVPKGRAGNRCAIGDRDTMANQKKNWWNRMRAAIKTGDADTMNELVESAPAS
VTGDEGDLPQGVNLNINLSPQQPLPDKAPEMGGDPTGDSDDDLKTLLKALLAKLERNA
TGDNDNKPDDNPTGDGEDDEEETTITGDSAWRAEVIVPGIDLSRKMKPTAFKREVLAS
ADKTLVRQIVGDADIRKLPKQSVDMAFNAVSEVAKGRNTRATTGDAQRLNMGMTSIAS
LNKQNAEFWANRKG"
misc_feature complement(702142..703350)
/locus_tag="SF0668"
/note="Uncharacterized conserved protein, DUF2213 domain
[Function unknown]; Region: COG3566"
/db_xref="CDD:442787"
gene complement(703357..704100)
/locus_tag="SF0669"
/db_xref="GeneID:1023645"
CDS complement(703357..704100)
/locus_tag="SF0669"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706597.3"
/db_xref="GeneID:1023645"
/translation="MTNRRSRQAEIRYRTSLRRIARAVGDIVNGRYDGSNDSITEIIA
ALERYSEIITPWATKVAENFTADLTRQNEKVWRQHSKNISRELRNLVESAPVGQVMQS
IIAEQVKYIKSLPLEAADRVYDIQNKAIEAVVTGGRAEQFAKEIASTGDVAKSRADLI
ARTELGRATGALDMARAIAIGSDGYIWRTADDGDVRDSHDHMKGKFVRWDSPPTLDGM
TGHAGELPNCRCYKEIVFVRVPFAMKRAA"
misc_feature complement(703387..703839)
/locus_tag="SF0669"
/note="Uncharacterized protein, contains phage Mu head
morphogenesis gpF-like domain [Mobilome: prophages,
transposons]; Region: COG2369"
/db_xref="CDD:441936"
gene complement(703991..705457)
/locus_tag="SF0670"
/db_xref="GeneID:1023636"
CDS complement(703991..705457)
/locus_tag="SF0670"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706598.1"
/db_xref="GeneID:1023636"
/translation="MARNKQALRRTVQATADGYENFIARVGMQTPNQHSASTYRANFT
SRNRMLVEWSYRSSWIIGEAVDAIPDDMTRKGIRITSEIDAKDRGILESQLDELQIWD
ALNDVLKWSRLYGGAVGFIMIEGQAPMTPLRPETIGKGKFKGILPLDRWMVDPALTRR
IKDMGPDLGKPEFYDVVTTATGIPAWRIHHSRLIRFDGVTLPFQQKMTENEWGMSVVE
RIWDRLTAFDSATVGAAQLVYKAHLRTYSVEKLRELIALGGPAYEALLKNIDLIRQFQ
SNEGMTLMDSRDKFETHQYSFSGLDDILSQFAEQISGAVGIPLVRLFGQSPKGFSTGD
ADLANYYDRISSLQERRLRLPVRRILDIMHRSELGKPLPDDFTFEFNPLWQMSDVDRS
TVALNTTNAISTALGDGLMTLKAAMTDLRENSDVTGIGASITNEDIENAEDEAPPGIG
EPDDEPQEPSGGNPVSNQPTQDSEGGRRHRKWSLRWFK"
misc_feature complement(704075..705457)
/locus_tag="SF0670"
/note="Uncharacterized conserved protein, DUF1073 domain
[Function unknown]; Region: COG3567"
/db_xref="CDD:442788"
gene complement(705457..706217)
/locus_tag="SF0671"
/pseudogene="unknown"
/db_xref="GeneID:1023633"
mobile_element complement(706191..707521)
/mobile_element_type="insertion sequence:IS2"
gene complement(706202..707107)
/locus_tag="SF0672"
/db_xref="GeneID:1023635"
CDS complement(706202..707107)
/locus_tag="SF0672"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_706600.1"
/db_xref="GeneID:1023635"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(706205..707107)
/locus_tag="SF0672"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(707065..707475)
/locus_tag="SF0673"
/db_xref="GeneID:1023623"
CDS complement(707065..707475)
/locus_tag="SF0673"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706601.3"
/db_xref="GeneID:1023623"
/translation="MIVLILVFRLVIGVQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMKNELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(707068..707430)
/locus_tag="SF0673"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene complement(707506..708129)
/locus_tag="SF0674"
/db_xref="GeneID:1023634"
CDS complement(707506..708129)
/locus_tag="SF0674"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706602.2"
/db_xref="GeneID:1023634"
/translation="MRARNKVLYGGRSSSKSWDAAGIAIFLSNKYTLRFCCARQIQNK
IEESVYTLLKIQIDRFGLRHRFRILNNKIINRVTGSEFVFYGLWRNIEEIKSLEGIDM
LWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVTDFVWRNFVVDPPEGTLIRKI
NYDENPFLSDTMLKVIDAARRRDPDGFKHVYEGVPESDDDAAIRLAP"
misc_feature complement(<707551..708123)
/locus_tag="SF0674"
/note="Phage terminase large subunit [Mobilome: prophages,
transposons]; Region: XtmB; COG1783"
/db_xref="CDD:441389"
gene complement(708140..708904)
/locus_tag="SF0675"
/db_xref="GeneID:1023622"
CDS complement(708140..708904)
/locus_tag="SF0675"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706603.1"
/db_xref="GeneID:1023622"
/translation="MAKPDWEAIESAYRAGVLSLRDIGEKYGVTEGAIRKRAKKLDWA
RSGGTQVCKNGTQKRKVRTSRKPAITGLTQKSTQLKTESTPDTKPIRGMRTDPPTNPF
QPGNQQALKHGGYARRLLLKDEVIEDAKALTLEDELFRLRANNLVAAENIGRWLVSLE
DANGDQERKMLIENISAAEKAMMRNTVRIESIVGTLATVGKIFADTAYRKAATDKVSL
EADRLRRDAGIDDGNGERDLNDFYSDIQTDAESGFT"
gene 709099..709611
/locus_tag="SF0676"
/db_xref="GeneID:1023646"
CDS 709099..709611
/locus_tag="SF0676"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706604.1"
/db_xref="GeneID:1023646"
/translation="MMEWINALMNYFVLHPYRLWGLLFIIAFTKSTLLISAILPPASI
MMATVITVSKTTLSPWEAGITVMSGAWCGTIVNYHLGIIIGHIPQLACIISSRSNTIE
RVRLQLQNNSVSILFTSRFIAVLRYIAPLVAGMLQLHPVKVYTVSLISAASWSALYVG
SFSFVLPFFS"
misc_feature 709099..>709578
/locus_tag="SF0676"
/note="Membrane integrity protein DedA, putative
transporter, DedA/Tvp38 family [Cell
wall/membrane/envelope biogenesis]; Region: DedA; COG0586"
/db_xref="CDD:440351"
mobile_element 709946..711194
/mobile_element_type="insertion sequence:IS911"
gene 709982..710320
/locus_tag="SF0677"
/db_xref="GeneID:1023637"
CDS 709982..710320
/locus_tag="SF0677"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_706605.1"
/db_xref="GeneID:1023637"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature 710021..710290
/locus_tag="SF0677"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 710347..711186
/locus_tag="SF0678"
/db_xref="GeneID:1023630"
CDS 710347..711186
/locus_tag="SF0678"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_706606.1"
/db_xref="GeneID:1023630"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature 710368..711177
/locus_tag="SF0678"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene 711215..711637
/locus_tag="SF0679"
/db_xref="GeneID:1023653"
CDS 711215..711637
/locus_tag="SF0679"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706607.1"
/db_xref="GeneID:1023653"
/translation="MFNLMLTSKKLTKTAINEALRRMKKAGLNKSELEAFLRDMINGK
QKSWLAHCTDAEALCIDRVISEVLAEHPGLISVLRQRYEGRGMTKCKMAELLNDAHPK
WSLRTCERRIEHWLKVAEFILYKPMVMAFGIEKKVIAF"
misc_feature <711215..711610
/locus_tag="SF0679"
/note="Phage antitermination protein Q; Region:
Phage_antitermQ; cl29970"
/db_xref="CDD:453083"
gene 711827..711903
/locus_tag="SF4455"
/db_xref="GeneID:3161770"
tRNA 711827..711903
/locus_tag="SF4455"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161770"
gene 711905..711981
/locus_tag="SF4456"
/db_xref="GeneID:3161799"
tRNA 711905..711981
/locus_tag="SF4456"
/product="tRNA-Arg"
/codon_recognized="AGA"
/db_xref="GeneID:3161799"
gene 711984..712058
/locus_tag="SF4457"
/db_xref="GeneID:3161774"
tRNA 711984..712058
/locus_tag="SF4457"
/product="tRNA-Thr"
/codon_recognized="ACA"
/db_xref="GeneID:3161774"
gene 712062..712136
/locus_tag="SF4458"
/db_xref="GeneID:3161779"
tRNA 712062..712136
/locus_tag="SF4458"
/product="tRNA-Gly"
/codon_recognized="GGA"
/db_xref="GeneID:3161779"
mobile_element complement(712907..714170)
/mobile_element_type="insertion sequence:IS600"
gene complement(712950..713768)
/locus_tag="SF0680"
/db_xref="GeneID:1023665"
CDS complement(712950..713768)
/locus_tag="SF0680"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706608.1"
/db_xref="GeneID:1023665"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(712977..>713768)
/locus_tag="SF0680"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(713804..714106)
/locus_tag="SF0681"
/db_xref="GeneID:1023667"
CDS complement(713804..714106)
/locus_tag="SF0681"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706609.1"
/db_xref="GeneID:1023667"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(713834..714106)
/locus_tag="SF0681"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 714382..716241
/locus_tag="SF0682"
/db_xref="GeneID:1027548"
CDS 714382..716241
/locus_tag="SF0682"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706610.1"
/db_xref="GeneID:1027548"
/translation="MRPSELSDLLWAQVDRVAPHLLPNGKIEGHEWVAGNVNGDKGNS
LKVNLIGKKKWADFAEGDGGDMLDLWMACRGINLHQAMQEAKAFLGIKDDDHHFDARR
EKKFSRPDRKKIARYVTRTESHLEYLQSRGISPEVVKRYEVVSGKVWNGERELDALVL
PYKRDGELLQVKRISTERPDGKKVIMAEGDCEPCLFGWQALDAGVRVVVLCEGEIDCM
SYAQYGISALSVPFGGGKGAKQQWIEFEYHNLDRFEEIFISMDVDDVGREAAREIVSR
LGEHRCRLVTLPYKDINECLMNGVTEDEIWQYIGTASYFDPEELYSAREFYQDTINAF
YGKQQYLFNPPWESLADKFQFREAELTLVNGVHGHGKACPLNEPILLADGTWTTHGNV
KIGDQVASVDGNPSTVTGIFPQGVRDVYRVTFEDGRYVDCAGDHLWEVTSRGFTKGEK
RRVIDTFGLKRLSETKRHKNGVRIPEITGDFGDHSEPLAWVIGSLLGDGSLSNGSVKF
SNVEPYMIERMKAELPDYNFSGDGKDWLISTARGQVNPLMETLRGYGLMGCTAKNKFI
PRVFFSANKSTRIGMLCGLLETDGYVEKDGTLVFSSASEELRNEVVNKNWPPS"
misc_feature 714394..>715194
/locus_tag="SF0682"
/note="hypothetical protein; Validated; Region: PRK07078"
/db_xref="CDD:235927"
misc_feature 715267..>716202
/locus_tag="SF0682"
/note="Intein/homing endonuclease [Replication,
recombination and repair, Mobilome: prophages,
transposons]; Region: Hop; COG1372"
/db_xref="CDD:440983"
mobile_element complement(716208..717456)
/mobile_element_type="insertion sequence:IS911"
gene complement(716216..717055)
/locus_tag="SF0683"
/db_xref="GeneID:1023663"
CDS complement(716216..717055)
/locus_tag="SF0683"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_706611.1"
/db_xref="GeneID:1023663"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(716225..717034)
/locus_tag="SF0683"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(717082..717420)
/locus_tag="SF0685"
/db_xref="GeneID:1023661"
CDS complement(717082..717420)
/locus_tag="SF0685"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_706612.1"
/db_xref="GeneID:1023661"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(717112..717381)
/locus_tag="SF0685"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 717477..718355
/locus_tag="SF0684"
/db_xref="GeneID:1023668"
CDS 717477..718355
/locus_tag="SF0684"
/note="Code: L; COG: COG1484"
/codon_start=1
/transl_table=11
/product="replication protein DnaC"
/protein_id="NP_706613.2"
/db_xref="GeneID:1023668"
/translation="MMTFNLREQQKRLQARMDELRAEIAFAQKGEKPWPYRSCLMREG
RGYCEKHGEYHTHILVWSDRNGEDREEISCCPDCLIAEANDLTMELSSIKAEELTDNA
GIALRFRDCEFDNYLEVNPGAARNLAACRRYAENWPDMLENGTSLVMTGSCGTGKNHL
AVAMAKHIIRNYLASVEITDVMRLTRAVKNCWRNDSEKTADEVIERYASMDLLIIDEV
GVQFGSAAEMAILQEIINARYESILPTILISNLSPEELWAFISPRIADRITDGGRNWL
SFNWPSYRSRIRGVAA"
misc_feature 717648..718343
/locus_tag="SF0684"
/note="Members of the P-loop NTPase domain superfamily are
characterized by a conserved nucleotide phosphate-binding
motif, also referred to as the Walker A motif
(GxxxxGK[S/T], where x is any residue), and the Walker B
motif (hhhh[D/E], where h is a...; Region: P-loop
containing Nucleoside Triphosphate Hydrolases; cl38936"
/db_xref="CDD:476819"
misc_feature 717927..717950
/locus_tag="SF0684"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(717930..717953,718122..718124,718224..718226)
/locus_tag="SF0684"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 718110..718127
/locus_tag="SF0684"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 718275..718277
/locus_tag="SF0684"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 718352..719743
/locus_tag="SF0686"
/db_xref="GeneID:1023673"
CDS 718352..719743
/locus_tag="SF0686"
/note="Code: L; COG: COG0305"
/codon_start=1
/transl_table=11
/product="helicase"
/protein_id="NP_706614.1"
/db_xref="GeneID:1023673"
/translation="MTTPVWRNDDLEGAVIGAFFLRGADPEVMDILATLPADVFSVRA
YQDIYTGICRQARVSGVIDPVLLCNEMPELAPVITDTGRKTWVKSSLEHYVAALRRNA
ALRDAEKTLNEALQKLRDAHTCEAAEDALKDAQNMMVTLSTGKGVIQPVHIDDVLPEV
VERVECRNQGLEKSRTLMTGIDELDAKTGGMEPGDLVFIAARPSMGKTELALDIIDKV
TEQGHGVLLFTMEMANIQIGERMVSAAGGMPVSRLKSVAHFEDEDWTRFSQGVGRMTG
RNIWMVDQANLAIDEICATTKHHLIKYPETALVVVDYLGLIKTRTTGRHDLAVGEISK
GLKGLAKSGGFPLIALSQLSRGVESRPNKRPMNSDLKNSGEIEADADIILMLYRDEVY
NPDTQARGIAEINITKQRNGSLGTIYRRFYNGHFLPVDQESARVLSTPMKPGNPRRYS
NKRTDSSKMERFF"
misc_feature 718373..719629
/locus_tag="SF0686"
/note="Replicative DNA helicase [Replication,
recombination and repair]; Region: DnaB; COG0305"
/db_xref="CDD:440074"
gene 719740..719997
/locus_tag="SF0687"
/db_xref="GeneID:1023671"
CDS 719740..719997
/locus_tag="SF0687"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706615.1"
/db_xref="GeneID:1023671"
/translation="MNNQTMTFTPEQLRKHAQEMLRHAEQLEKTGITKDAIRKDMVPA
LRELMQAKHRAQKAVDELVDCVAELETRVGKFEKLVQEALR"
gene 720285..720665
/gene="ybcQ"
/locus_tag="SF0688"
/db_xref="GeneID:1023664"
CDS 720285..720665
/gene="ybcQ"
/locus_tag="SF0688"
/codon_start=1
/transl_table=11
/product="Q protein"
/protein_id="NP_706616.2"
/db_xref="GeneID:1023664"
/translation="MRDIQQVLERWGAWVANNHEDVTWSSIAAGFKGLIPSKVKSRPQ
CCDDDAMVICGCMARLNRNNNDLHDLLVDYYVFGMTFMTLARKHGCSDGYIGKKLQKA
EGVVEGMLMMLGVRLEMDKYIEHP"
misc_feature 720285..720638
/gene="ybcQ"
/locus_tag="SF0688"
/note="Phage antitermination protein Q; Region:
Phage_antitermQ; pfam06530"
/db_xref="CDD:428991"
gene 720865..720941
/locus_tag="SF4459"
/db_xref="GeneID:3161854"
tRNA 720865..720941
/locus_tag="SF4459"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161854"
gene 720943..721019
/locus_tag="SF4460"
/db_xref="GeneID:3161846"
tRNA 720943..721019
/locus_tag="SF4460"
/product="tRNA-Arg"
/codon_recognized="AGA"
/db_xref="GeneID:3161846"
gene 721022..721097
/locus_tag="SF4461"
/db_xref="GeneID:3161810"
tRNA 721022..721097
/locus_tag="SF4461"
/product="tRNA-Thr"
/codon_recognized="ACA"
/db_xref="GeneID:3161810"
gene 721101..721175
/locus_tag="SF4462"
/db_xref="GeneID:3161807"
tRNA 721101..721175
/locus_tag="SF4462"
/product="tRNA-Gly"
/codon_recognized="GGA"
/db_xref="GeneID:3161807"
gene 721468..721683
/locus_tag="SF0689"
/db_xref="GeneID:1023660"
CDS 721468..721683
/locus_tag="SF0689"
/codon_start=1
/transl_table=11
/product="S protein"
/protein_id="NP_706617.1"
/db_xref="GeneID:1023660"
/translation="MKSMDKISTGIAYGTSAGSAGYWFLQWLDQVRPSQWAAIGVLGS
LLLGLLTYLTNLYFKIREDKRKAARGE"
misc_feature 721480..721671
/locus_tag="SF0689"
/note="Bacteriophage P21 holin S; Region: Phage_holin_2_1;
pfam04971"
/db_xref="CDD:428228"
gene 721687..722316
/locus_tag="SF0690"
/db_xref="GeneID:1023670"
CDS 721687..722316
/locus_tag="SF0690"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706618.1"
/db_xref="GeneID:1023670"
/translation="MKHEEMNQRFNHLENEITELNKKLSALVSSEDENKRRDEHYAAI
YDYCHKVAHETFMKFLQEKFLPAALSEKEAAYLRPEYVITVNSAGEEEHKSDFIASAP
DKDQEPHRPFRVSCEEGEFVVYENGKPVRASHHHCLKIINLAIRCLKDENTRVMKRIG
RCMGYLQVAAEIEALASGADMDAAVREALLRDFNTPPLRKSLMTGSSRG"
gene 722382..722915
/locus_tag="SF0691"
/db_xref="GeneID:1023681"
CDS 722382..722915
/locus_tag="SF0691"
/codon_start=1
/transl_table=11
/product="endolysin R of prophage CP-933V"
/protein_id="NP_706619.3"
/db_xref="GeneID:1023681"
/translation="MSAKIKYGLSAAVLALIAAGASAPQILDQFLNEKEGNHTTAYRD
GSGIWTICRGATMVDGKPVIPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQK
AGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDVGRDCRIRSNNCYGQ
VIRRDQESALACWGIDQ"
misc_feature 722412..722891
/locus_tag="SF0691"
/note="endolysin R21-like proteins; Region:
endolysin_R21-like; cd16900"
/db_xref="CDD:381619"
gene 722912..723316
/locus_tag="SF0692"
/db_xref="GeneID:1023683"
CDS 722912..723316
/locus_tag="SF0692"
/codon_start=1
/transl_table=11
/product="endopeptidase"
/protein_id="NP_706620.2"
/db_xref="GeneID:1023683"
/translation="MSRVTAIISALVICIIVCLSWAVNHYRDNAITYKEQRDKNAGEL
KLANATITDMQQRQRDADALDAKYTKELADAKAENDALRRKLDNGGRVLVKGKCPVPS
SAETSSASGMGNDATVELSPVAGRNVLGIRDG"
misc_feature 722996..723307
/locus_tag="SF0692"
/note="Bacteriophage Rz lysis protein; Region:
Phage_lysis; pfam03245"
/db_xref="CDD:427215"
mobile_element 723314..723690
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 723378..723680
/locus_tag="SF0693"
/db_xref="GeneID:1023641"
CDS 723378..723680
/locus_tag="SF0693"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706621.1"
/db_xref="GeneID:1023641"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 723378..723650
/locus_tag="SF0693"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element complement(723689..724119)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(723731..724600)
/locus_tag="SF0694"
/pseudogene="unknown"
/db_xref="GeneID:1023650"
mobile_element complement(724120..724980)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(724600..724926)
/locus_tag="SF0696"
/db_xref="GeneID:1026125"
CDS complement(724600..724926)
/locus_tag="SF0696"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706624.1"
/db_xref="GeneID:1026125"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNNILRLASAYFAKAEF
DRLWKK"
misc_feature complement(724636..724923)
/locus_tag="SF0696"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 724980..725872
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 725011..725829
/locus_tag="SF0697"
/db_xref="GeneID:1023648"
CDS 725011..725829
/locus_tag="SF0697"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706625.1"
/db_xref="GeneID:1023648"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKHKFRATTNSNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <725011..725802
/locus_tag="SF0697"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 725857..726180
/locus_tag="SF0698"
/db_xref="GeneID:1023659"
CDS 725857..726180
/locus_tag="SF0698"
/codon_start=1
/transl_table=11
/product="DNA packaging protein of prophage; terminase
small subunit"
/protein_id="NP_706626.1"
/db_xref="GeneID:1023659"
/translation="MPVHLKLLIARWELTAEQAVAQQLKNQVSKGNLIDTGFCIFALS
KLAMALSSTLDSIPLSMQRQFPDLTPRHIDHLKILIAKGANQCARAGDKLPDLLDEYI
RTTTE"
misc_feature <725869..726165
/locus_tag="SF0698"
/note="Protein of unknown function (DUF1441); Region:
DUF1441; cl46780"
/db_xref="CDD:481120"
gene 726152..728062
/locus_tag="SF0699"
/pseudogene="unknown"
/db_xref="GeneID:1023657"
gene 728263..729856
/locus_tag="SF0701"
/pseudogene="unknown"
/db_xref="GeneID:1023678"
gene 729846..731351
/locus_tag="SF0703"
/db_xref="GeneID:1023685"
CDS 729846..731351
/locus_tag="SF0703"
/note="Code: NO; COG: COG0616"
/codon_start=1
/transl_table=11
/product="head-tail preconnector gp5"
/protein_id="NP_706631.1"
/db_xref="GeneID:1023685"
/translation="MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQ
QQVQLDAPGMLAETDEYMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTG
YDGIVACLQQAMADTQVRGVLLDIDSSGGQATGAFDCADMIYRLRQLKPVWALCNDTA
CSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGN
QFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVMGTEAAVFEGQSGIEAELA
DELINASDAISVMAATLNTHDTGGTMPQLTATEAAAQENQRVMGILTCQEAKGREQLA
TMLAGQQGMSVEQARAILAVAAPQQSGVSAQSEADRIMACEEAKGREQLAATLAAMPE
MTVEKARPILAASPQANAGPSLRDQIMALDEAKGAEAQAEKLAACPGMTVENARAVLA
AASGRAEPVSASTTAMFEHFMANHSPAAVQGGVPQTSADGDADVKMLMAMP"
misc_feature 730074..730715
/locus_tag="SF0703"
/note="Signal peptide peptidase A (SppA) 36K type, a
serine protease, has catalytic Ser-Lys dyad; Region:
S49_Sppa_36K_type; cd07022"
/db_xref="CDD:132933"
misc_feature order(730095..730097,730218..730220,730329..730331,
730374..730376,730380..730382,730404..730415,
730560..730562,730629..730637,730641..730643,
730650..730652)
/locus_tag="SF0703"
/note="tandem repeat interface [polypeptide binding];
other site"
/db_xref="CDD:132933"
misc_feature order(730155..730157,730176..730178,730254..730256,
730452..730454,730458..730472,730554..730556,
730566..730568)
/locus_tag="SF0703"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:132933"
misc_feature 730329..730331
/locus_tag="SF0703"
/note="active site residues [active]"
/db_xref="CDD:132933"
gene 731388..731735
/locus_tag="SF0704"
/db_xref="GeneID:1023656"
CDS 731388..731735
/locus_tag="SF0704"
/codon_start=1
/transl_table=11
/product="capsid protein small subunit"
/protein_id="NP_706632.1"
/db_xref="GeneID:1023656"
/translation="MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLD
EDTGKLVVWDGQKAGHVVGILVLPLEGTETVLTYYKSGTFATEAIHWPERVDTHKKAN
AFAGSALSHAALP"
misc_feature 731400..731720
/locus_tag="SF0704"
/note="Bacteriophage lambda head decoration protein D;
Region: HDPD; pfam02924"
/db_xref="CDD:427057"
gene 731793..732821
/locus_tag="SF0705"
/db_xref="GeneID:1023654"
CDS 731793..732821
/locus_tag="SF0705"
/codon_start=1
/transl_table=11
/product="major capsid protein"
/protein_id="NP_706633.1"
/db_xref="GeneID:1023654"
/translation="MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKI
TGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLN
GPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGEQFETVEVDFGRSVGN
NITQAGGTEWSAQDRDTFDPTHDLDAYCDFASGTINIAIMDGKVWRLLNGFKLFREKL
DTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVAEDGTEKRYLPDGTLVLG
NTAAEGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPD
EFVVVQVK"
misc_feature 731802..732812
/locus_tag="SF0705"
/note="Phage major capsid protein E; Region: Phage_cap_E;
pfam03864"
/db_xref="CDD:427552"
gene 732873..733259
/locus_tag="SF0706"
/db_xref="GeneID:1023691"
CDS 732873..733259
/locus_tag="SF0706"
/codon_start=1
/transl_table=11
/product="DNA-packaging protein"
/protein_id="NP_706634.2"
/db_xref="GeneID:1023691"
/translation="MATKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELGD
AGEVAEPDTYSPSKDDPTAHKGESVPEQPGIVTGDETGQVTVVALATLHTKCNGSVIF
VSPGTSFRVSAEVAASMAAGGLAKRQ"
misc_feature 732879..733247
/locus_tag="SF0706"
/note="DNA packaging protein FI; Region: Packaging_FI;
pfam14000"
/db_xref="CDD:290707"
gene 733271..733648
/locus_tag="SF0707"
/db_xref="GeneID:1026132"
CDS 733271..733648
/locus_tag="SF0707"
/codon_start=1
/transl_table=11
/product="tail attachment protein"
/protein_id="NP_706635.1"
/db_xref="GeneID:1026132"
/translation="MDGFDNLFDAALAGVNEVILRDMGISAVITSGELEGTHLTGVFD
DPESISFVAGGIRLEDSSPCLFVKTADISQLRRQDTLTIGDDSFFVDRITPDDGGCCY
IRLRRGSPAPQNNARMRRYDEGT"
misc_feature 733271..733621
/locus_tag="SF0707"
/note="Phage Head-Tail Attachment; Region: Phage_attach;
cl05094"
/db_xref="CDD:446606"
gene 733635..734219
/locus_tag="SF0708"
/db_xref="GeneID:1023693"
CDS 733635..734219
/locus_tag="SF0708"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_706636.2"
/db_xref="GeneID:1023693"
/translation="MKGLENAIRNLNSLDTRMVPQTSAWAVNRVAAKIVSVATRQVAQ
NTVAGDNQVKGIPLKTVRERVRLLKASPSGKMYARMRVNRGNLPAIKLGTAQVRLARS
RHGSNSRHRGSVLKVGKYLFRDAFIQQLANGRWHVMRRIDGKNRYPIDVVKIPMSGPL
TQAFEDARDRIIAAEMPKQLGYALKQQLRLHLSK"
misc_feature 733635..734216
/locus_tag="SF0708"
/note="Prophage minor tail protein Z (GPZ); Region:
Minor_tail_Z; pfam06763"
/db_xref="CDD:284235"
gene 734216..734617
/locus_tag="SF0709"
/db_xref="GeneID:1023692"
CDS 734216..734617
/locus_tag="SF0709"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_706637.1"
/db_xref="GeneID:1023692"
/translation="MNRHTQIRQSVLARLREQCGDSATFFDGLPAFIDAQELPAVAVW
LSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLID
TMIPLGFNYQRDNEMATWAMAEITYQITYTN"
misc_feature 734222..734608
/locus_tag="SF0709"
/note="Phage minor tail protein U; Region: Phage_tail_U;
pfam06141"
/db_xref="CDD:399267"
gene 734622..735368
/locus_tag="SF0710"
/db_xref="GeneID:1023686"
CDS 734622..735368
/locus_tag="SF0710"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_706638.1"
/db_xref="GeneID:1023686"
/translation="MVMTTPNPLAKTKGAGTTFWMYTGNGDAFANPLSDTDWLRLAMV
KDLQPGEMTADAEDDTYLDDKDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLF
DSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEGTET
VGVTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATV
KGVKQGSVSIVGMTSDGEFVAVAAVTVSAP"
misc_feature 734679..735083
/locus_tag="SF0710"
/note="Lambda phage tail tube protein, TTP; Region:
Phage_TTP_12; pfam16461"
/db_xref="CDD:406780"
misc_feature 735111..735332
/locus_tag="SF0710"
/note="Bacterial Ig-like domain (group 2); Region: Big_2;
cl02708"
/db_xref="CDD:445894"
gene 735409..735813
/locus_tag="SF0711"
/db_xref="GeneID:1027552"
CDS 735409..735813
/locus_tag="SF0711"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_706639.1"
/db_xref="GeneID:1027552"
/translation="MHPENMMFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAK
FDAQEGELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDAL
GAGAERVLSLSGMGTIENAGDDDHEALTPEKS"
misc_feature 735427..735810
/locus_tag="SF0711"
/note="Bacteriophage lambda tail assembly chaperone, TAC,
protein G; Region: Phage_TAC_2; cl06106"
/db_xref="CDD:297413"
gene 735822..736151
/locus_tag="SF0712"
/db_xref="GeneID:1023682"
CDS 735822..736151
/locus_tag="SF0712"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_706640.1"
/db_xref="GeneID:1023682"
/translation="MQFVMRLAREFRRADWRRMLSDMSATELGEWGDYFRMQSFSDVW
MDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYG
PDSQPGH"
misc_feature 735837..736139
/locus_tag="SF0712"
/note="Minor tail protein T; Region: Phage_tail_T;
cl05636"
/db_xref="CDD:297128"
gene 736123..739164
/locus_tag="SF0713"
/db_xref="GeneID:1023689"
CDS 736123..739164
/locus_tag="SF0713"
/codon_start=1
/transl_table=11
/product="tail length tape measure protein"
/protein_id="NP_706641.1"
/db_xref="GeneID:1023689"
/translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQ
RFMERQTQAARQTMQAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQK
MREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQ
DYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGV
SSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRA
GWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEKFNRQLALTGHYAGVTVG
QLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDT
INQFKRLKDDPVNAAKALDNALHFLNATQLEQIRVLGEQGRSSDAARIAMSALAEETG
KRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYP
WTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNET
EAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYS
QQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKN
ELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGD
KQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKR
YWQELEVAQGDWKNGAMRAFQNFTADADNAAGTAEQMFTVAFSSAGNALATFCTTGKL
NFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVN
RPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIEINND
GTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR"
misc_feature <736216..>736890
/locus_tag="SF0713"
/note="Chromosome segregation ATPase Smc [Cell cycle
control, cell division, chromosome partitioning]; Region:
Smc; COG1196"
/db_xref="CDD:440809"
misc_feature 736807..737400
/locus_tag="SF0713"
/note="Prophage tail length tape measure protein; Region:
TMP_2; pfam06791"
/db_xref="CDD:429120"
misc_feature <737578..>738405
/locus_tag="SF0713"
/note="Chromosome segregation ATPase Smc [Cell cycle
control, cell division, chromosome partitioning]; Region:
Smc; COG1196"
/db_xref="CDD:440809"
misc_feature 738079..739041
/locus_tag="SF0713"
/note="phage tail tape measure protein, lambda family;
Region: tape_meas_lam_C; TIGR01541"
/db_xref="CDD:273681"
gene 739164..739493
/locus_tag="SF0714"
/db_xref="GeneID:1023680"
CDS 739164..739493
/locus_tag="SF0714"
/codon_start=1
/transl_table=11
/product="minor tail protein"
/protein_id="NP_706642.1"
/db_xref="GeneID:1023680"
/translation="METFHWKVRPDMNVVSEPKVVTVKLGDGYEQRRAAGLNNQLSTY
SVTIRVRKGEHPSLKAFLERHGGVRAFQWTPPYDWKLIRVVCRKWSASVGALWVTVTA
DFEQVVN"
misc_feature 739170..739487
/locus_tag="SF0714"
/note="Phage minor tail protein; Region: Phage_min_tail;
pfam05939"
/db_xref="CDD:428681"
gene 739493..740191
/locus_tag="SF0715"
/db_xref="GeneID:1023694"
CDS 739493..740191
/locus_tag="SF0715"
/codon_start=1
/transl_table=11
/product="minor tail protein"
/protein_id="NP_706643.1"
/db_xref="GeneID:1023694"
/translation="MQDIRQETLNECTRAEQSARVELWEIDLTEVGGERYFFCNEQNE
KGEPVTWQGRQYQAYPIQGSGFELNGRGCAARPTLTVSNLHGMVTGMAEDLQSLVGGT
VVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLATPTETDG
AVFPGRIMLANTCMWTYRSDECGYTGRAVADEFDKPTTDIRKDKCSKCMRGCELRNNT
GNFGGFLSINKLSQ"
misc_feature 739508..740188
/locus_tag="SF0715"
/note="Phage tail protein [Mobilome: prophages,
transposons]; Region: gp18; COG4672"
/db_xref="CDD:443709"
gene 740196..740939
/locus_tag="SF0716"
/db_xref="GeneID:1023695"
CDS 740196..740939
/locus_tag="SF0716"
/codon_start=1
/transl_table=11
/product="tail assembly protein"
/protein_id="NP_706644.1"
/db_xref="GeneID:1023695"
/translation="MTQTESAILAHARRCAPAESCGFVVRTPEGDRYLPSENISGEPE
ERFRMAPEDWLRAQMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGTIHK
FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEAT
GLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
THSLWRHREWHASAFTGICNDLAAASTFV"
misc_feature 740202..740519
/locus_tag="SF0716"
/note="Mpr1p, Pad1p N-terminal (MPN) domains with
catalytic isopeptidase activity (metal-binding) found in
proteins also containing NlpC/P60 domains; Region:
MPN_NLPC_P60; cd08073"
/db_xref="CDD:163704"
misc_feature order(740250..740252,740397..740399,740403..740405,
740427..740429,740436..740438)
/locus_tag="SF0716"
/note="MPN+ (JAMM) motif [active]"
/db_xref="CDD:163704"
misc_feature order(740397..740399,740403..740405,740436..740438)
/locus_tag="SF0716"
/note="Zinc-binding site [ion binding]; other site"
/db_xref="CDD:163704"
misc_feature 740526..740867
/locus_tag="SF0716"
/note="NlpC/P60 family; Region: NLPC_P60; cl21534"
/db_xref="CDD:473902"
gene 740903..741478
/locus_tag="SF0717"
/db_xref="GeneID:1023697"
CDS 740903..741478
/locus_tag="SF0717"
/codon_start=1
/transl_table=11
/product="phage tail protein"
/protein_id="NP_706645.1"
/db_xref="GeneID:1023697"
/translation="MQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSDGWYQVRIAG
RDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVAIWMPGVGIM
ASNLLFSLGASMTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMVAQGNVLPVL
YGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
misc_feature 740906..741445
/locus_tag="SF0717"
/note="Phage-related protein, tail assembly protein I
[Mobilome: prophages, transposons]; Region: COG4723"
/db_xref="CDD:443758"
gene 741539..745018
/locus_tag="SF0718"
/db_xref="GeneID:1023690"
CDS 741539..745018
/locus_tag="SF0718"
/codon_start=1
/transl_table=11
/product="host specificity protein"
/protein_id="NP_706646.1"
/db_xref="GeneID:1023690"
/translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKS
VLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
TITSANIDRLRLTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
SQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
GVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMAWCL
WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRK
AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
KDRHNVVEVNWIDPDNGHETATELVEDTQAIVRYGRNVTKMDAFGCTSRGQAHRAGLW
LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLD
REITLPSSGTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTL
RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHL
TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFRQ
LALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITVVPKLAVYDP
TVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVRSVNTVGKS
AFVEAVGRASDDAEGYLSFYKGLINKTHLGKELWTQIDNGQLAPDLTEIRTSITNVSN
EITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIEN
TPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNP
PAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIEGDLVKTVG
KPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNNIYSSCRLI
VKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPTASISDLLV
VVMKKSTAGISIS"
misc_feature 742184..744559
/locus_tag="SF0718"
/note="Phage-related protein, tail protein J [Mobilome:
prophages, transposons]; Region: COG4733"
/db_xref="CDD:443767"
misc_feature 744467..744889
/locus_tag="SF0718"
/note="Fibronectin type III protein; Region: DUF3672;
pfam12421"
/db_xref="CDD:289206"
gene 745086..745685
/locus_tag="SF0719"
/db_xref="GeneID:1023718"
CDS 745086..745685
/locus_tag="SF0719"
/codon_start=1
/transl_table=11
/product="membrane protein"
/protein_id="NP_706647.1"
/db_xref="GeneID:1023718"
/translation="MRKLYAAILSAAICLAVSGAPAWASEHRSTLSAGYLHASTNAPG
SDDLNGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAG
LSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAW
GAGVQFNPTESVAIDLAYEGSGSGDWRTDGFIVGVGYKF"
misc_feature 745086..745682
/locus_tag="SF0719"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl21487"
/db_xref="CDD:473880"
gene 745707..747032
/locus_tag="SF0720"
/pseudogene="unknown"
/db_xref="GeneID:1023717"
gene 747111..747734
/locus_tag="SF0721"
/db_xref="GeneID:1023698"
CDS 747111..747734
/locus_tag="SF0721"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_706649.1"
/db_xref="GeneID:1023698"
/translation="MHMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFD
DRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAW
RTEQEAKPFTFEWNGRTWNADASSVARLSPVVMLAKSVAAQTHMVWSDADNQQVKLSM
PELEELAAAMVQAQVDRNDEIYRRQREMKEELSSLDDLASIRAFDVK"
misc_feature 747396..747719
/locus_tag="SF0721"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
gene complement(747914..749677)
/gene="ipaH_1"
/locus_tag="SF0722"
/db_xref="GeneID:1023679"
CDS complement(747914..749677)
/gene="ipaH_1"
/locus_tag="SF0722"
/codon_start=1
/transl_table=11
/product="invasion plasmid antigen"
/protein_id="NP_706650.1"
/db_xref="GeneID:1023679"
/translation="MKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGA
ATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPP
SLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPD
LPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRL
PELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQALQRLTSSPDYH
GPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDR
LSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRK
TLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTM
LAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKR
TEADRWALAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYR
QLTDEVLALRLPENGSQLHHS"
misc_feature complement(747959..749599)
/gene="ipaH_1"
/locus_tag="SF0722"
/note="type III secretion system effector E3 ubiquitin
transferase SlrP; Region: PRK15370"
/db_xref="CDD:185268"
misc_feature complement(749186..749308)
/gene="ipaH_1"
/locus_tag="SF0722"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature complement(749126..749185)
/gene="ipaH_1"
/locus_tag="SF0722"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature complement(748946..749005)
/gene="ipaH_1"
/locus_tag="SF0722"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
gene complement(750260..750736)
/gene="ybhB"
/locus_tag="SF0723"
/db_xref="GeneID:1023675"
CDS complement(750260..750736)
/gene="ybhB"
/locus_tag="SF0723"
/note="Code: R; COG: COG1881"
/codon_start=1
/transl_table=11
/product="kinase inhibitor protein"
/protein_id="NP_706651.2"
/db_xref="GeneID:1023675"
/translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
YDGAAPPKGETHRYIFTVHALDVERIDVDEGASGAMVGFNVHFHSLASASITAMFS"
misc_feature complement(750263..750736)
/gene="ybhB"
/locus_tag="SF0723"
/note="putative kinase inhibitor protein; Provisional;
Region: PRK10257"
/db_xref="CDD:182339"
misc_feature complement(order(750389..750391,750395..750397,
750401..750403,750410..750424,750548..750550,
750554..750556,750578..750583))
/gene="ybhB"
/locus_tag="SF0723"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176643"
gene complement(750795..752195)
/gene="bioA"
/locus_tag="SF0725"
/db_xref="GeneID:1023684"
CDS complement(750795..752195)
/gene="bioA"
/locus_tag="SF0725"
/note="Code: H; COG: COG0161"
/codon_start=1
/transl_table=11
/product="adenosylmethionine--8-amino-7-oxononanoate
aminotransferase BioA"
/protein_id="NP_706652.3"
/db_xref="GeneID:1023684"
/translation="MSSVGGEPWGFSKTCFLLLIRCRLVNLNLFNLVYKSIMTTDDLA
FDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN
AAMKTQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMA
LQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSR
MDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREG
ILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKALTGGTMTLSATLTTREVAETIS
NGEAGCFMHGPTFMGNPLACAAANASLAIIESGEWQQQVAAIEVQLREQLAPARDAEM
VADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRL
TAAVNRAVQDETFFCQ"
misc_feature complement(750801..752084)
/gene="bioA"
/locus_tag="SF0725"
/note="adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated; Region: PRK07986"
/db_xref="CDD:181189"
misc_feature complement(order(751263..751265,751341..751346,
751350..751352,751452..751454,751644..751646,
751650..751655,751746..751754))
/gene="bioA"
/locus_tag="SF0725"
/note="inhibitor-cofactor binding pocket [active]"
/db_xref="CDD:99735"
misc_feature complement(order(751263..751265,751341..751343,
751350..751352,751452..751454,751650..751655,
751746..751751))
/gene="bioA"
/locus_tag="SF0725"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature complement(751263..751265)
/gene="bioA"
/locus_tag="SF0725"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene 752171..753211
/gene="bioB"
/locus_tag="SF0724"
/db_xref="GeneID:1023676"
CDS 752171..753211
/gene="bioB"
/locus_tag="SF0724"
/note="Code: H; COG: COG0502"
/codon_start=1
/transl_table=11
/product="biotin synthase"
/protein_id="NP_706653.1"
/db_xref="GeneID:1023676"
/translation="MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFEPRQVQVST
LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
KNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF
YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLGQALMT
PDTDEYYNAAAL"
misc_feature 752186..753106
/gene="bioB"
/locus_tag="SF0724"
/note="Biotin synthase or related enzyme [Coenzyme
transport and metabolism]; Region: BioB; COG0502"
/db_xref="CDD:440268"
gene 753208..754362
/gene="bioF"
/locus_tag="SF0726"
/db_xref="GeneID:1023714"
CDS 753208..754362
/gene="bioF"
/locus_tag="SF0726"
/note="Code: H; COG: COG0156"
/codon_start=1
/transl_table=11
/product="8-amino-7-oxononanoate synthase"
/protein_id="NP_706654.1"
/db_xref="GeneID:1023714"
/translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF
SSNDYLGLSHHPQIIRAWKQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRA
LLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFTHNDVAHLAR
LLASPCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQAL
RASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL
AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG"
misc_feature 753208..754353
/gene="bioF"
/locus_tag="SF0726"
/note="8-amino-7-oxononanoate synthase; Reviewed; Region:
PRK05958"
/db_xref="CDD:235655"
misc_feature order(753346..753348,753526..753534,753604..753606,
753730..753732,753742..753747,753817..753819,
753823..753828,753904..753906,753913..753915,
754288..754290)
/gene="bioF"
/locus_tag="SF0726"
/note="substrate-cofactor binding pocket [active]"
/db_xref="CDD:99747"
misc_feature order(753526..753534,753604..753606,753730..753732,
753742..753744,753817..753819,753823..753828,
753904..753906,753913..753915)
/gene="bioF"
/locus_tag="SF0726"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99747"
misc_feature 753913..753915
/gene="bioF"
/locus_tag="SF0726"
/note="catalytic residue [active]"
/db_xref="CDD:99747"
gene 754349..755104
/gene="bioC"
/locus_tag="SF0727"
/db_xref="GeneID:1023688"
CDS 754349..755104
/gene="bioC"
/locus_tag="SF0727"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="biotin biosynthesis protein BioC"
/protein_id="NP_706655.2"
/db_xref="GeneID:1023688"
/translation="MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYT
HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLAQARHKDAADHYLAGDIESLPLATA
TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQARQAVDERP
HANRFLPPDEIEESLNGVRYQHHIQLITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
misc_feature 754349..755101
/gene="bioC"
/locus_tag="SF0727"
/note="biotin biosynthesis protein BioC; Provisional;
Region: PRK10258"
/db_xref="CDD:182340"
gene 755097..755774
/gene="bioD"
/locus_tag="SF0728"
/db_xref="GeneID:1023672"
CDS 755097..755774
/gene="bioD"
/locus_tag="SF0728"
/note="Code: H; COG: COG0132"
/codon_start=1
/transl_table=11
/product="dithiobiotin synthetase"
/protein_id="NP_706656.2"
/db_xref="GeneID:1023672"
/translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
EKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAESTSPHIISAQEGRPIESLVMSAG
LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
YINLALL"
misc_feature 755100..755768
/gene="bioD"
/locus_tag="SF0728"
/note="Dethiobiotin synthetase [Coenzyme transport and
metabolism]; Region: BioD; COG0132"
/db_xref="CDD:439902"
gene 756353..758374
/gene="uvrB"
/locus_tag="SF0729"
/db_xref="GeneID:1026139"
CDS 756353..758374
/gene="uvrB"
/locus_tag="SF0729"
/note="Code: L; COG: COG0556"
/codon_start=1
/transl_table=11
/product="excinuclease ABC subunit B"
/protein_id="NP_706657.1"
/db_xref="GeneID:1026139"
/translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVIVVASVSAIYGLGDPDLYLKMMLH
LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
NNKLLEEQRLTQRTQFDLEMMDELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDRSTPSMAKAIG
ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
MDMLPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
misc_feature 756353..758371
/gene="uvrB"
/locus_tag="SF0729"
/note="excinuclease ABC subunit UvrB; Region: PRK05298"
/db_xref="CDD:235395"
gene complement(758566..759474)
/gene="ybhK"
/locus_tag="SF0730"
/db_xref="GeneID:1023669"
CDS complement(758566..759474)
/gene="ybhK"
/locus_tag="SF0730"
/note="Code: S; COG: COG0391"
/codon_start=1
/transl_table=11
/product="structural protein"
/protein_id="NP_706658.2"
/db_xref="GeneID:1023669"
/translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
GGSTGRIRRSEGGIAWGDMRNCLNQLITEPNVASAMFEYRFGGNGELSGHNLGNLMLK
ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV
YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
EASDIPYRHDRQLLHNALEKALQALG"
misc_feature complement(758578..759441)
/gene="ybhK"
/locus_tag="SF0730"
/note="Family of CofD-like proteins and proteins related
to YvcK; Region: CofD_YvcK; cl00425"
/db_xref="CDD:444899"
misc_feature complement(order(758797..758802,758887..758889,
758899..758904,759418..759426))
/gene="ybhK"
/locus_tag="SF0730"
/note="phosphate binding site [ion binding]; other site"
/db_xref="CDD:132873"
misc_feature complement(order(759181..759183,759283..759285,
759292..759294,759334..759336,759346..759348))
/gene="ybhK"
/locus_tag="SF0730"
/note="putative substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:132873"
misc_feature complement(order(759112..759117,759124..759126,
759154..759159,759163..759168,759175..759180,
759187..759189,759202..759204))
/gene="ybhK"
/locus_tag="SF0730"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132873"
gene 759871..760860
/gene="moaA"
/locus_tag="SF0731"
/db_xref="GeneID:1023722"
CDS 759871..760860
/gene="moaA"
/locus_tag="SF0731"
/note="Code: H; COG: COG2896"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein A"
/protein_id="NP_706659.2"
/db_xref="GeneID:1023722"
/translation="MASQLTDVFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF
GEGGVNLRDLLEGDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG"
misc_feature 759871..760857
/gene="moaA"
/locus_tag="SF0731"
/note="GTP 3',8-cyclase MoaA; Region: moaA; PRK00164"
/db_xref="CDD:234672"
gene 760882..761394
/gene="moaB"
/locus_tag="SF0732"
/db_xref="GeneID:1027567"
CDS 760882..761394
/gene="moaB"
/locus_tag="SF0732"
/note="Code: H; COG: COG0521"
/codon_start=1
/transl_table=11
/product="molybdopterin biosynthesis protein B"
/protein_id="NP_706660.1"
/db_xref="GeneID:1027567"
/translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
VDEAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
PCNFHPHLKK"
misc_feature 760900..761388
/gene="moaB"
/locus_tag="SF0732"
/note="molybdenum cofactor biosynthesis protein B,
proteobacterial; Region: moaB_proteo; TIGR02667"
/db_xref="CDD:131715"
misc_feature order(761113..761121,761209..761211,761290..761295,
761305..761307,761314..761316)
/gene="moaB"
/locus_tag="SF0732"
/note="MPT binding site [active]"
/db_xref="CDD:238451"
misc_feature order(761119..761121,761125..761130,761134..761136,
761146..761148,761170..761178,761191..761193,
761200..761205,761236..761238,761245..761247)
/gene="moaB"
/locus_tag="SF0732"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238451"
gene 761397..761882
/gene="moaC"
/locus_tag="SF0733"
/db_xref="GeneID:1023713"
CDS 761397..761882
/gene="moaC"
/locus_tag="SF0733"
/note="Code: H; COG: COG0315"
/codon_start=1
/transl_table=11
/product="molybdenum cofactor biosynthesis protein MoaC"
/protein_id="NP_706661.1"
/db_xref="GeneID:1023713"
/translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
D"
misc_feature 761397..761873
/gene="moaC"
/locus_tag="SF0733"
/note="cyclic pyranopterin monophosphate synthase MoaC;
Region: moaC; PRK09364"
/db_xref="CDD:236483"
misc_feature order(761439..761450,761553..761630,761637..761657,
761811..761846)
/gene="moaC"
/locus_tag="SF0733"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238708"
misc_feature order(761547..761555,761601..761615,761796..761804)
/gene="moaC"
/locus_tag="SF0733"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238708"
misc_feature order(761547..761549,761595..761597,761616..761618,
761622..761627,761721..761723,761730..761738,
761745..761747,761778..761780,761787..761789)
/gene="moaC"
/locus_tag="SF0733"
/note="putative active site [active]"
/db_xref="CDD:238708"
gene 761875..762120
/gene="moaD"
/locus_tag="SF0734"
/db_xref="GeneID:1023720"
CDS 761875..762120
/gene="moaD"
/locus_tag="SF0734"
/note="Code: H; COG: COG1977"
/codon_start=1
/transl_table=11
/product="molybdopterin synthase small subunit"
/protein_id="NP_706662.2"
/db_xref="GeneID:1023720"
/translation="MIKVLFFAQVRELVGTDATEVAADYPTVEALRQHLAAQSDRWAL
ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
misc_feature 761875..762117
/gene="moaD"
/locus_tag="SF0734"
/note="molybdopterin synthase small subunit; Provisional;
Region: moaD; PRK11130"
/db_xref="CDD:182985"
misc_feature order(761893..761898,762019..762021,762025..762030,
762034..762036,762043..762054,762097..762117)
/gene="moaD"
/locus_tag="SF0734"
/note="MoaD-MoeB interaction site [polypeptide binding];
other site"
/db_xref="CDD:340452"
misc_feature order(761893..761898,762040..762048,762085..762087,
762100..762117)
/gene="moaD"
/locus_tag="SF0734"
/note="MoaD-MoaE interaction site [polypeptide binding];
other site"
/db_xref="CDD:340452"
misc_feature order(761893..761898,762043..762048,762103..762117)
/gene="moaD"
/locus_tag="SF0734"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:340452"
misc_feature 762115..762117
/gene="moaD"
/locus_tag="SF0734"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:340452"
gene 762122..762574
/gene="moaE"
/locus_tag="SF0735"
/db_xref="GeneID:1023701"
CDS 762122..762574
/gene="moaE"
/locus_tag="SF0735"
/note="Code: H; COG: COG0314"
/codon_start=1
/transl_table=11
/product="molybdopterin guanine dinucleotide biosynthesis
protein MoaE"
/protein_id="NP_706663.1"
/db_xref="GeneID:1023701"
/translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSA
HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDLQAAKRW"
misc_feature 762122..762571
/gene="moaE"
/locus_tag="SF0735"
/note="molybdopterin synthase catalytic subunit MoaE;
Region: moaE; PRK10678"
/db_xref="CDD:182642"
misc_feature order(762176..762178,762188..762190,762206..762208,
762212..762226,762230..762232,762236..762238,
762398..762400,762425..762427,762431..762433,
762455..762457,762467..762469)
/gene="moaE"
/locus_tag="SF0735"
/note="MoaE homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:238385"
misc_feature order(762278..762280,762284..762286,762293..762295,
762302..762304,762314..762316,762368..762370,
762476..762481,762485..762487,762491..762499,
762527..762529)
/gene="moaE"
/locus_tag="SF0735"
/note="MoaD interaction [polypeptide binding]; other site"
/db_xref="CDD:238385"
misc_feature order(762476..762478,762497..762499)
/gene="moaE"
/locus_tag="SF0735"
/note="active site residues [active]"
/db_xref="CDD:238385"
gene 762711..763415
/gene="ybhL"
/locus_tag="SF0736"
/db_xref="GeneID:1023730"
CDS 762711..763415
/gene="ybhL"
/locus_tag="SF0736"
/note="Code: R; COG: COG0670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706664.2"
/db_xref="GeneID:1023730"
/translation="MDRFPRSDSIVQPWAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS
IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD
FINLFLMLLRIFGNRR"
misc_feature 762756..763403
/gene="ybhL"
/locus_tag="SF0736"
/note="Bacterial BAX inhibitor (BI)-1/YccA-like proteins;
Region: BI-1-like_bacterial; cd10432"
/db_xref="CDD:198414"
gene 763620..764333
/gene="ybhM"
/locus_tag="SF0737"
/db_xref="GeneID:1023674"
CDS 763620..764333
/gene="ybhM"
/locus_tag="SF0737"
/note="Code: R; COG: COG0670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706665.2"
/db_xref="GeneID:1023674"
/translation="MESYSQNSNKLDFQHEARILNGIWLITALGLVATAGLAWGAKYL
EITATKYDSPPMYVAIGLLLLCMYGLSKDINKINAAIAGVIYLFLLSLVAIVVASLVP
VYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERP
IWVISCLMIVLWPGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFG
ILAAIAITLVWQRHTRFFH"
misc_feature 763662..764288
/gene="ybhM"
/locus_tag="SF0737"
/note="Bacterial BAX inhibitor (BI)-1/YccA-like proteins;
Region: BI-1-like_bacterial; cd10432"
/db_xref="CDD:198414"
gene complement(764369..765325)
/gene="ybhN"
/locus_tag="SF0738"
/db_xref="GeneID:1027550"
CDS complement(764369..765325)
/gene="ybhN"
/locus_tag="SF0738"
/note="Code: R; COG: COG0392"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706666.1"
/db_xref="GeneID:1027550"
/translation="MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIR
DYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTW
VGGIGMRYRLYSRLGLPGSTITRISSLSITTNWLGYILLAGIIFTAGVVELPDYWYVD
QTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMV
MGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGS
IIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM"
misc_feature complement(<764450..765292)
/gene="ybhN"
/locus_tag="SF0738"
/note="bifunctional lysylphosphatidylglycerol
flippase/synthetase MprF; Region: bifunc_MprF; NF033480"
/db_xref="CDD:468043"
gene complement(765325..766566)
/gene="ybhO"
/locus_tag="SF0739"
/db_xref="GeneID:1023712"
CDS complement(765325..766566)
/gene="ybhO"
/locus_tag="SF0739"
/note="Code: I; COG: COG1502"
/codon_start=1
/transl_table=11
/product="cardiolipin synthase 2"
/protein_id="NP_706667.1"
/db_xref="GeneID:1023712"
/translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
DNVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLF
GMRTNVFRRMHRKIVVIDARIAFIGGLNYSSEHMSSYGPEAKQDYAVRLEGPIVEDIL
QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
AQREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPRLTQVDP
PAQPTMETQDRVETENTGVNP"
misc_feature complement(765334..766563)
/gene="ybhO"
/locus_tag="SF0739"
/note="cardiolipin synthase ClsB; Region: PRK11263"
/db_xref="CDD:236888"
gene complement(766563..767324)
/gene="ybhP"
/locus_tag="SF0740"
/db_xref="GeneID:1023702"
CDS complement(766563..767324)
/gene="ybhP"
/locus_tag="SF0740"
/note="Code: R; COG: COG3568"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706668.1"
/db_xref="GeneID:1023702"
/translation="MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADI
VCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRY
PIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW
VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLD
RIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL"
misc_feature complement(766566..767315)
/gene="ybhP"
/locus_tag="SF0740"
/note="Metal-dependent hydrolase,
endonuclease/exonuclease/phosphatase family [General
function prediction only]; Region: ElsH; COG3568"
/db_xref="CDD:442789"
gene 767457..767867
/gene="ybhQ"
/locus_tag="SF0741"
/db_xref="GeneID:1023732"
CDS 767457..767867
/gene="ybhQ"
/locus_tag="SF0741"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706669.1"
/db_xref="GeneID:1023732"
/translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL
CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
misc_feature 767457..767852
/gene="ybhQ"
/locus_tag="SF0741"
/note="Putative inner membrane protein YbhQ; Region: YbhQ;
pfam11076"
/db_xref="CDD:431643"
gene complement(767829..768935)
/gene="ybhR"
/locus_tag="SF0742"
/db_xref="GeneID:1023708"
CDS complement(767829..768935)
/gene="ybhR"
/locus_tag="SF0742"
/note="Code: R; COG: COG0842"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706670.1"
/db_xref="GeneID:1023708"
/translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
ADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELV
VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
misc_feature complement(<768042..768932)
/gene="ybhR"
/locus_tag="SF0742"
/note="ABC-type Na+ efflux pump, permease component NatB
[Energy production and conversion, Inorganic ion transport
and metabolism]; Region: NatB; COG1668"
/db_xref="CDD:441274"
misc_feature complement(767838..768425)
/gene="ybhR"
/locus_tag="SF0742"
/note="ABC-type multidrug transport system, permease
component [Defense mechanisms]; Region: YadH; COG0842"
/db_xref="CDD:440604"
gene complement(768946..770079)
/gene="ybhS"
/locus_tag="SF0743"
/db_xref="GeneID:1023725"
CDS complement(768946..770079)
/gene="ybhS"
/locus_tag="SF0743"
/note="Code: R; COG: COG0842"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706671.1"
/db_xref="GeneID:1023725"
/translation="MSNPILSWHRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG
YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQSGKIRG
LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
misc_feature complement(769078..>770076)
/gene="ybhS"
/locus_tag="SF0743"
/note="ribosome-associated ATPase/putative transporter
RbbA; Region: ABC2_perm_RbbA; NF033858"
/db_xref="CDD:468210"
gene complement(770072..771823)
/gene="ybhF"
/locus_tag="SF0744"
/db_xref="GeneID:1023711"
CDS complement(770072..771823)
/gene="ybhF"
/locus_tag="SF0744"
/note="Code: Q; COG: COG1131"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_706672.1"
/db_xref="GeneID:1023711"
/translation="MTRQDMNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLV
GPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTV
MENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVG
EPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEG
ELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKK
EATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETV
IEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQAL
VLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMS
EAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHI
NSMVEKGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTME
QAFIQLIHDWDKEHSNE"
misc_feature complement(<770114..771796)
/gene="ybhF"
/locus_tag="SF0744"
/note="ribosome-associated ATPase/putative transporter
RbbA; Region: ABC2_perm_RbbA; NF033858"
/db_xref="CDD:468210"
gene complement(771801..772799)
/locus_tag="SF0745"
/db_xref="GeneID:1023716"
CDS complement(771801..772799)
/locus_tag="SF0745"
/note="Code: Q; COG: COG0845"
/codon_start=1
/transl_table=11
/product="efflux pump membrane fusion protein"
/protein_id="NP_706673.1"
/db_xref="GeneID:1023716"
/translation="MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRT
VNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLML
AGYRDEEIAQAAAAVKQAQAAYDYEQNFYNRQQGLWKSRTISANDLENARSSRDQAQA
TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTR
AVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQ
IGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE"
misc_feature complement(771804..772796)
/locus_tag="SF0745"
/note="putative efflux pump membrane fusion protein;
Provisional; Region: PRK03598"
/db_xref="CDD:235136"
gene complement(772799..773482)
/gene="ybiH"
/locus_tag="SF0746"
/db_xref="GeneID:1026146"
CDS complement(772799..773482)
/gene="ybiH"
/locus_tag="SF0746"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator"
/protein_id="NP_706674.1"
/db_xref="GeneID:1026146"
/translation="MDCAMNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQ
AGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIREL
ILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWT
GCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLI
LQGLSQRSL"
misc_feature complement(772802..773473)
/gene="ybiH"
/locus_tag="SF0746"
/note="putative DNA-binding transcriptional regulator;
Provisional; Region: PRK11552"
/db_xref="CDD:236928"
gene 773699..774919
/gene="rhlE"
/locus_tag="SF0747"
/db_xref="GeneID:1023719"
CDS 773699..774919
/gene="rhlE"
/locus_tag="SF0747"
/note="Code: LKJ; COG: COG0513"
/codon_start=1
/transl_table=11
/product="ATP-dependent RNA helicase RhlE"
/protein_id="NP_706675.1"
/db_xref="GeneID:1023719"
/translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSVAIH
GNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
QRGGIRLMNKRKTA"
misc_feature 773699..774886
/gene="rhlE"
/locus_tag="SF0747"
/note="ATP-dependent RNA helicase RhlE; Provisional;
Region: PRK10590"
/db_xref="CDD:236722"
misc_feature order(773756..773761,773765..773773,773780..773782,
773834..773857)
/gene="rhlE"
/locus_tag="SF0747"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350669"
gene complement(775093..775575)
/gene="ybiA"
/locus_tag="SF0749"
/db_xref="GeneID:1023696"
CDS complement(775093..775575)
/gene="ybiA"
/locus_tag="SF0749"
/note="Code: S; COG: COG3236"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706676.1"
/db_xref="GeneID:1023696"
/translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAARPIKVDGNTW
PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALR
AKFEQHAELRVLLLATAPAKLVEHTENDAYWGDGGNGKGKNRLGYLLMELREQLAIEK
"
misc_feature complement(775105..775548)
/gene="ybiA"
/locus_tag="SF0749"
/note="N-glycosidase YbiA/RibX (riboflavin biosynthesis,
damage control), NADAR superfamily [Coenzyme transport and
metabolism, Defense mechanisms]; Region: RibX; COG3236"
/db_xref="CDD:442468"
gene 775695..777845
/gene="dinG"
/locus_tag="SF0748"
/db_xref="GeneID:1023745"
CDS 775695..777845
/gene="dinG"
/locus_tag="SF0748"
/note="Code: L; COG: COG1199"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase DinG"
/protein_id="NP_706677.2"
/db_xref="GeneID:1023745"
/translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVTRREIQEAE
VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITVPWYRLQL
DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
RFAMGELPDELLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA
LGMFEVQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRFE
PSIDNEEQHIAEMAAFFREQVESKKYLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD
QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI
TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
misc_feature 775698..777782
/gene="dinG"
/locus_tag="SF0748"
/note="ATP-dependent DNA helicase DinG; Provisional;
Region: dinG; PRK11747"
/db_xref="CDD:236966"
gene 777873..778835
/gene="ybiB"
/locus_tag="SF0750"
/db_xref="GeneID:1023704"
CDS 777873..778835
/gene="ybiB"
/locus_tag="SF0750"
/note="Code: E; COG: COG0547"
/codon_start=1
/transl_table=11
/product="glycosyl transferase"
/protein_id="NP_706678.1"
/db_xref="GeneID:1023704"
/translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA
ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALCLSSVSHPEYIGRVAKFFSDI
GGWALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQ
WTERCLAGSEAIPESLKIQMACCLVATGEAATISDGLARVNQAF"
misc_feature 777873..778817
/gene="ybiB"
/locus_tag="SF0750"
/note="glycosyl transferase family protein; Provisional;
Region: PRK08136"
/db_xref="CDD:236160"
gene 778976..780061
/gene="ybiC"
/locus_tag="SF0751"
/db_xref="GeneID:1023735"
CDS 778976..780061
/gene="ybiC"
/locus_tag="SF0751"
/note="Code: C; COG: COG2055"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="NP_706679.1"
/db_xref="GeneID:1023735"
/translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG
HDSHGIGMIPSYVRSWSQGHLQINHHAKIVKEAGAAVTLDGDRAFGQVAAHEAMALGI
EKAHQHGIAAVALHNSHHIGRIGYWAEQCSAAGFVSIHFVSVVGIPMVAPFHGRDSRF
GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA
VMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII
INPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGS
WQAICDAARQIGMSEETLQAFCQQLAS"
misc_feature 778976..780028
/gene="ybiC"
/locus_tag="SF0751"
/note="putative dehydrogenase; Provisional; Region:
PRK10098"
/db_xref="CDD:182240"
gene complement(780290..780550)
/gene="ybiJ"
/locus_tag="SF0752"
/db_xref="GeneID:1023700"
CDS complement(780290..780550)
/gene="ybiJ"
/locus_tag="SF0752"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706680.1"
/db_xref="GeneID:1023700"
/translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG
ASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK"
misc_feature complement(780293..780550)
/gene="ybiJ"
/locus_tag="SF0752"
/note="hypothetical protein; Provisional; Region:
PRK10259"
/db_xref="CDD:137782"
gene complement(780815..781081)
/gene="ybiI"
/locus_tag="SF0753"
/db_xref="GeneID:1023749"
CDS complement(780815..781081)
/gene="ybiI"
/locus_tag="SF0753"
/note="Code: T; COG: COG1734"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706681.1"
/db_xref="GeneID:1023749"
/translation="MASAWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDRQLR"
misc_feature complement(780818..781081)
/gene="ybiI"
/locus_tag="SF0753"
/note="DksA/TraR family C4-type zinc finger protein;
Region: PRK11019"
/db_xref="CDD:182903"
gene complement(781155..781868)
/gene="ybiX"
/locus_tag="SF0754"
/db_xref="GeneID:1023754"
CDS complement(781155..781868)
/gene="ybiX"
/locus_tag="SF0754"
/note="Code: S; COG: COG3128"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706682.3"
/db_xref="GeneID:1023754"
/translation="MWGAGPTFWRTCMMYHIPGVLSPQDVAHFREQLEQAEWVDGRVT
TGAQGAQVKNNQQVDTRSALYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNN
ETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGD
LVLYPSSSLHCVTPVTRGVRVASFMWIQSMIRDDKKRAMLFELDKNIQSLKSRYGENE
EILSLLNLYHNLLREWSEI"
misc_feature complement(781158..781829)
/gene="ybiX"
/locus_tag="SF0754"
/note="Predicted 2-oxoglutarate- and Fe(II)-dependent
dioxygenase YbiX [General function prediction only];
Region: PiuC; COG3128"
/db_xref="CDD:442362"
gene complement(781874..785594)
/locus_tag="SF0756"
/pseudo
/db_xref="GeneID:1023751"
misc_feature complement(781874..785594)
/locus_tag="SF0756"
/note="Similar to Escherichia coli K12 outer membrane
receptor for iron transport gi: 1787024 (761 aa). BLAST
with identity of 98% in 1240 aa. This CDS has been
disrupted by insertion. The sequence has been checked and
is believed to be correct."
/pseudo
mobile_element 783863..785290
/mobile_element_type="insertion sequence:IS4"
gene 783930..785276
/locus_tag="SF0755"
/db_xref="GeneID:1023703"
CDS 783930..785276
/locus_tag="SF0755"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_706683.1"
/db_xref="GeneID:1023703"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIGQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLSKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature 784020..785018
/locus_tag="SF0755"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene complement(785859..786263)
/gene="ybiM"
/locus_tag="SF0757"
/db_xref="GeneID:1023706"
CDS complement(785859..786263)
/gene="ybiM"
/locus_tag="SF0757"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706684.1"
/db_xref="GeneID:1023706"
/translation="MHVIDLSYFVKIYRSKNKHFSVNFLRHLHRAGDLHLSGTTRCIY
EDVIMKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDK
LAEKAREQGAKGYVINSAGGNDQMLGTATIYK"
misc_feature complement(785862..786119)
/gene="ybiM"
/locus_tag="SF0757"
/note="DUF1471 family periplasmic protein McbA; Region:
peri_YbiM_McbA; NF040473"
/db_xref="CDD:439700"
gene 786314..787321
/gene="ybiN"
/locus_tag="SF0758"
/db_xref="GeneID:1023733"
CDS 786314..787321
/gene="ybiN"
/locus_tag="SF0758"
/note="Code: R; COG: COG3129"
/codon_start=1
/transl_table=11
/product="23S rRNA (adenine(1618)-N(6))-methyltransferase"
/protein_id="NP_706685.1"
/db_xref="GeneID:1023733"
/translation="MGNDKRSQIFTLSRYAGILRRCLKENAMSAQKPGLHPRNRHHSR
YDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGF
LCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGS
ETSSQALSSAQAIISANPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDS
AAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVNFIKKMIEESKGFAKQVMW
FTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQ
R"
misc_feature 786383..787318
/gene="ybiN"
/locus_tag="SF0758"
/note="23S rRNA (adenine(1618)-N(6))-methyltransferase
RlmF; Region: PRK11727"
/db_xref="CDD:236964"
gene complement(787318..789381)
/gene="ybiO"
/locus_tag="SF0759"
/db_xref="GeneID:1023710"
CDS complement(787318..789381)
/gene="ybiO"
/locus_tag="SF0759"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706686.1"
/db_xref="GeneID:1023710"
/translation="MLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQK
VTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALSHFSMLAVLVFGFYWLIR
LCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNA
GSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWGRRLSWLS
SLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHMLNFAE
HSLAFFSLFIRAFALVWHWLASAYFIMLFFFSLFDPGNSLKFMMGATVRSLAIIGIAA
FVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAW
GLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSA
RTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDI
ITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANF
VRGIGSVVANYDVDRHEDADKANQALKDAVTELMENEEIRGLIIGEPNFAGIVGLSNT
AFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPP
GEPTL"
misc_feature complement(787321..789381)
/gene="ybiO"
/locus_tag="SF0759"
/note="putative mechanosensitive channel protein;
Provisional; Region: PRK11465"
/db_xref="CDD:183147"
gene complement(789803..790525)
/gene="glnQ"
/locus_tag="SF0760"
/db_xref="GeneID:1023744"
CDS complement(789803..790525)
/gene="glnQ"
/locus_tag="SF0760"
/note="Code: E; COG: COG1126"
/codon_start=1
/transl_table=11
/product="glutamine ABC transporter ATP-binding protein"
/protein_id="NP_706687.1"
/db_xref="GeneID:1023744"
/translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALGNVMFGP
LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
NPQVLIKNPPSQRLQEFLQHVS"
misc_feature complement(789806..790525)
/gene="glnQ"
/locus_tag="SF0760"
/note="glutamine ABC transporter ATP-binding protein GlnQ;
Region: glnQ; PRK09493"
/db_xref="CDD:181906"
gene complement(790522..791181)
/gene="glnP"
/locus_tag="SF0761"
/db_xref="GeneID:1023707"
CDS complement(790522..791181)
/gene="glnP"
/locus_tag="SF0761"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="glutamine ABC transporter permease"
/protein_id="NP_706688.1"
/db_xref="GeneID:1023707"
/translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK
DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
L"
misc_feature complement(790525..791181)
/gene="glnP"
/locus_tag="SF0761"
/note="glutamine ABC transporter permease protein;
Reviewed; Region: glnP; PRK09494"
/db_xref="CDD:181907"
misc_feature complement(order(790561..790566,790573..790578,
790585..790590,790594..790599,790606..790611,
790639..790644,790681..790686,790693..790704,
790723..790725,790732..790737,790777..790779,
790828..790830,790837..790842,790852..790854,
790858..790863,790870..790872,790876..790878,
790882..790887,790957..790959,790963..790968,
790975..791004,791008..791019,791047..791049,
791062..791067,791074..791079))
/gene="glnP"
/locus_tag="SF0761"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(790687..790704,790957..791001))
/gene="glnP"
/locus_tag="SF0761"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(790609..790611,790639..790641,
790648..790650,790684..790686,790900..790902,
790957..790959))
/gene="glnP"
/locus_tag="SF0761"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(790756..790758,790768..790773,
790789..790827))
/gene="glnP"
/locus_tag="SF0761"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(791320..792066)
/gene="glnH"
/locus_tag="SF0762"
/db_xref="GeneID:1023705"
CDS complement(791320..792066)
/gene="glnH"
/locus_tag="SF0762"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="glutamine ABC transporter substrate-binding
protein"
/protein_id="NP_706689.1"
/db_xref="GeneID:1023705"
/translation="MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGD
KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL
RDKVNGALKTLRENGTYNEIYKKWFSTEPK"
misc_feature complement(791323..792066)
/gene="glnH"
/locus_tag="SF0762"
/note="glutamine ABC transporter periplasmic protein;
Reviewed; Region: glnH; PRK09495"
/db_xref="CDD:236540"
misc_feature complement(order(791530..791535,791644..791649,
791656..791658,791776..791778,791791..791793,
791797..791802,791851..791853,791962..791964,
791971..791973))
/gene="glnH"
/locus_tag="SF0762"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270216"
gene complement(792470..792973)
/gene="dps"
/locus_tag="SF0763"
/db_xref="GeneID:1023737"
CDS complement(792470..792973)
/gene="dps"
/locus_tag="SF0763"
/note="Code: L; COG: COG0783"
/codon_start=1
/transl_table=11
/product="DNA starvation/stationary phase protection
protein Dps"
/protein_id="NP_706690.2"
/db_xref="GeneID:1023737"
/translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
FIESNIE"
misc_feature complement(792473..792955)
/gene="dps"
/locus_tag="SF0763"
/note="DNA starvation/stationary phase protection protein
Dps; Provisional; Region: PRK09448"
/db_xref="CDD:236521"
misc_feature complement(order(792728..792733,792740..792742,
792752..792754,792785..792787,792818..792823,
792827..792829,792839..792844))
/gene="dps"
/locus_tag="SF0763"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:153102"
misc_feature complement(order(792728..792730,792740..792742,
792773..792775,792785..792787,792821..792823))
/gene="dps"
/locus_tag="SF0763"
/note="DPS ferroxidase diiron center [ion binding]; other
site"
/db_xref="CDD:153102"
misc_feature complement(order(792524..792529,792548..792550))
/gene="dps"
/locus_tag="SF0763"
/note="ion pore [active]"
/db_xref="CDD:153102"
gene complement(793272..794159)
/gene="ybiF"
/locus_tag="SF0764"
/db_xref="GeneID:1023743"
CDS complement(793272..794159)
/gene="ybiF"
/locus_tag="SF0764"
/note="Code: GER; COG: COG0697"
/codon_start=1
/transl_table=11
/product="threonine and homoserine efflux system"
/protein_id="NP_706691.2"
/db_xref="GeneID:1023743"
/translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVSAPGVT
ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA
LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW
AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVVILS
TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS
MGSTLTVRKESKIKELDIN"
misc_feature complement(793281..794159)
/gene="ybiF"
/locus_tag="SF0764"
/note="threonine and homoserine efflux system;
Provisional; Region: PRK10532"
/db_xref="CDD:182525"
gene 794512..795027
/gene="ompX"
/locus_tag="SF0765"
/db_xref="GeneID:1023752"
CDS 794512..795027
/gene="ompX"
/locus_tag="SF0765"
/codon_start=1
/transl_table=11
/product="outer membrane protein X"
/protein_id="NP_706692.2"
/db_xref="GeneID:1023752"
/translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
GTWIAGVGYRF"
misc_feature 794512..795024
/gene="ompX"
/locus_tag="SF0765"
/note="outer membrane protein OmpX; Region: ompX;
PRK09408"
/db_xref="CDD:181828"
gene complement(795075..796658)
/gene="ybiP"
/locus_tag="SF0766"
/db_xref="GeneID:1023738"
CDS complement(795075..796658)
/gene="ybiP"
/locus_tag="SF0766"
/note="Code: R; COG: COG2194"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706693.1"
/db_xref="GeneID:1023738"
/translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST
EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT
YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD
GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK
NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY
TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP
FMVISSGDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF
QLQKVDYNHLGTDIFDPKP"
misc_feature complement(795207..796016)
/gene="ybiP"
/locus_tag="SF0766"
/note="Lipooligosaccharide Phosphoethanolamine Transferase
A (LptA) or Lipid A Phosphoethanolamine Transferase;
Region: LptA; cd16017"
/db_xref="CDD:293741"
misc_feature complement(order(795342..795344,795390..795395,
795558..795560,795870..795872,795984..795986))
/gene="ybiP"
/locus_tag="SF0766"
/note="putative active site [active]"
/db_xref="CDD:293741"
misc_feature complement(order(795390..795392,795558..795560,
795870..795872,795984..795986))
/gene="ybiP"
/locus_tag="SF0766"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:293741"
misc_feature complement(order(795339..795344,795348..795350,
795750..795752,795789..795791))
/gene="ybiP"
/locus_tag="SF0766"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:293741"
gene complement(796930..797058)
/locus_tag="SF0766a"
/db_xref="GeneID:16608309"
CDS complement(796930..797058)
/locus_tag="SF0766a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439233.1"
/db_xref="GeneID:16608309"
/translation="MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK"
misc_feature complement(796939..797058)
/locus_tag="SF0766a"
/note="manganase accumulation protein MntS; Region:
small_MntS; NF033226"
/db_xref="CDD:468004"
gene 797244..797711
/locus_tag="SF0767"
/db_xref="GeneID:1027553"
CDS 797244..797711
/locus_tag="SF0767"
/note="Code: K; COG: COG1321"
/codon_start=1
/transl_table=11
/product="manganese transport regulator MntR"
/protein_id="NP_706694.1"
/db_xref="GeneID:1027553"
/translation="MSRRAGTPIAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK"
misc_feature 797253..797708
/locus_tag="SF0767"
/note="manganese-binding transcriptional regulator MntR;
Region: PRK11050"
/db_xref="CDD:182927"
gene 797708..798826
/gene="ybiR"
/locus_tag="SF0768"
/db_xref="GeneID:1023723"
CDS 797708..798826
/gene="ybiR"
/locus_tag="SF0768"
/note="Code: P; COG: COG0471"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706695.1"
/db_xref="GeneID:1023723"
/translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL
FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
AQMAPMAGAMMLTLLLLCWCCFPGKALQYHTGVQTPEWKPRLVWNCLGLYIVFLTALE
FKQELWGLVIVAAGFVLLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS
HLSEPGLWLTAVGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLANLIA
LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVMIPAW"
misc_feature 797729..798805
/gene="ybiR"
/locus_tag="SF0768"
/note="Putative anion permease YbiR. Based on sequence
similarity, YbiR proteins are predicted to function as
anion translocating permeases in eubacteria, archaea and
plants. They belong to ArsB/NhaD superfamily of permeases
that have been shown to translocate...; Region:
YbiR_permease; cd01117"
/db_xref="CDD:238537"
misc_feature order(797744..797785,797831..797884,797951..798001,
798005..798058,798068..798139,798203..798247,
798317..798355,798371..798415,798437..798493,
798545..798553,798554..798589,798638..798694,
798761..798799)
/gene="ybiR"
/locus_tag="SF0768"
/note="transmembrane helices; other site"
/db_xref="CDD:238537"
gene complement(798884..799804)
/gene="ybiS"
/locus_tag="SF0769"
/db_xref="GeneID:1023729"
CDS complement(798884..799804)
/gene="ybiS"
/locus_tag="SF0769"
/note="Code: S; COG: COG1376"
/codon_start=1
/transl_table=11
/product="L,D-transpeptidase"
/protein_id="NP_706696.1"
/db_xref="GeneID:1023729"
/translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVEHKKAGPTWTPTAKMHAE
YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
misc_feature complement(798887..799804)
/gene="ybiS"
/locus_tag="SF0769"
/note="L,D-transpeptidase; Provisional; Region: PRK10260"
/db_xref="CDD:182341"
gene 800023..801615
/gene="ybiT"
/locus_tag="SF0770"
/db_xref="GeneID:1023724"
CDS 800023..801615
/gene="ybiT"
/locus_tag="SF0770"
/note="Code: R; COG: COG0488"
/codon_start=1
/transl_table=11
/product="ABC-F family ATPase"
/protein_id="NP_706697.1"
/db_xref="GeneID:1023724"
/translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
KLRVLLAQALFAEPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL
FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHE
YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
TPERVIDFSGNYEDYLRSKGIE"
misc_feature 800023..801612
/gene="ybiT"
/locus_tag="SF0770"
/note="ABC transporter ATP-binding protein; Provisional;
Region: PRK15064"
/db_xref="CDD:237894"
gene complement(801856..803121)
/gene="ybiU"
/locus_tag="SF0771"
/db_xref="GeneID:1023715"
CDS complement(801856..803121)
/gene="ybiU"
/locus_tag="SF0771"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706698.2"
/db_xref="GeneID:1023715"
/translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW
DQSMLDYLNRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQS
FLNRLWTFESDGKQWFNPDVSVIYPDRIRRLPPGTTSKGLGAHTDSGALERWLLPAYQ
HVFANVFNGNLAKYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG
DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP
REDYETNWEGRFTLADLNIHGKRALGMDV"
misc_feature complement(801865..803076)
/gene="ybiU"
/locus_tag="SF0771"
/note="Protein of unknown function (DUF1479); Region:
DUF1479; pfam07350"
/db_xref="CDD:399968"
gene complement(803273..804088)
/locus_tag="SF0772"
/db_xref="GeneID:1023741"
CDS complement(803273..804088)
/locus_tag="SF0772"
/note="Code: R; COG: COG0561"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706699.1"
/db_xref="GeneID:1023741"
/translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVAS
GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPL
VIDKLHIALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
misc_feature complement(803309..804079)
/locus_tag="SF0772"
/note="Escherichia coli YbiV sugar
phosphatase/phosphotransferase and related proteins;
belongs to the haloacid dehalogenase-like superfamily;
Region: HAD_YbiV-Like; cd07518"
/db_xref="CDD:319820"
misc_feature complement(order(803432..803437,803441..803449,
803513..803515,803537..803539,803639..803641,
803645..803647,803888..803890,803951..803959,
804050..804064))
/locus_tag="SF0772"
/note="active site"
/db_xref="CDD:319820"
gene complement(804234..806666)
/gene="ybiW"
/locus_tag="SF0773"
/db_xref="GeneID:1023740"
CDS complement(804234..806666)
/gene="ybiW"
/locus_tag="SF0773"
/note="Code: C; COG: COG1882"
/codon_start=1
/transl_table=11
/product="formate acetyltransferase"
/protein_id="NP_706700.1"
/db_xref="GeneID:1023740"
/translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIMLVAVSE
HIERFAALARAMAATETRESRRDELLAMAENCDLIAHQPPQTFWQALQLCYFIQLILQ
IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
SKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
SNDFLDACVHVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
GYRCTGMSFINFARVMLAALEGGRDATSGKVFLPQEKALSAGNFNNFDEVMDAWDTQI
RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
QDDIIARTEHML"
misc_feature complement(804237..806645)
/gene="ybiW"
/locus_tag="SF0773"
/note="glycyl radical enzyme, PFL2/glycerol dehydratase
family; Region: PFL2-3; TIGR01774"
/db_xref="CDD:273798"
gene complement(806672..807598)
/gene="ybiY"
/locus_tag="SF0774"
/db_xref="GeneID:1023728"
CDS complement(806672..807598)
/gene="ybiY"
/locus_tag="SF0774"
/note="Code: O; COG: COG1180"
/codon_start=1
/transl_table=11
/product="pyruvate formate-lyase 2 activating enzyme"
/protein_id="NP_706701.1"
/db_xref="GeneID:1023728"
/translation="MFERNREATMIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNP
ESRARTQDLLYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCP
TQALTVCGEVKSVEEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPEMATALLQACHEA
GIHTAVETCLHVPWKYIAPSLPYIDLFLADLKHVADAPFKQWTDGNAARVLDNLKKLA
AAGKKIIIRVPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLP
YDAPEKPLDAPELLDFAQQYACQKGLTATLRG"
misc_feature complement(806696..807568)
/gene="ybiY"
/locus_tag="SF0774"
/note="glycyl-radical enzyme activating protein; Region:
PFLE_PFLC; TIGR02494"
/db_xref="CDD:274163"
gene 807630..808364
/gene="mipB"
/locus_tag="SF0775"
/db_xref="GeneID:1027551"
CDS 807630..808364
/gene="mipB"
/locus_tag="SF0775"
/note="Code: G; COG: COG0176"
/codon_start=1
/transl_table=11
/product="transaldolase"
/protein_id="NP_706702.3"
/db_xref="GeneID:1027551"
/translation="MRQLFREFSRDSLHSDKKYILRMVMELYLDTSDVVAVKALSRIF
PLAGVTTNPSIIAAGKKPLDVVLPQLHEAMGGQGRLFAQVMATTAEGMVNDALKLRSI
IADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRID
AQGGSGIQTVTDLHQLLKMHAPQAKVLAASFKTPRQALDCLLAGCESITLPLDVAQQM
ISYPAVEAAVTKFEQDWQGAFGRTSI"
misc_feature 807702..808361
/gene="mipB"
/locus_tag="SF0775"
/note="fructose-6-phosphate aldolase; Reviewed; Region:
PRK12653"
/db_xref="CDD:183653"
misc_feature order(807717..807719,807780..807785,807954..807956,
808092..808094,808194..808196)
/gene="mipB"
/locus_tag="SF0775"
/note="active site"
/db_xref="CDD:188643"
misc_feature order(807750..807752,807759..807761,807786..807791,
807798..807800,807804..807806,807816..807818,
807876..807878,807894..807896,807912..807914,
807972..807974,807978..807983,807990..807992,
808047..808049,808092..808094,808098..808100,
808107..808109,808113..808115,808164..808169,
808206..808208,808212..808214,808230..808235,
808242..808244,808290..808292,808296..808301,
808308..808310,808320..808325,808329..808334)
/gene="mipB"
/locus_tag="SF0775"
/note="intersubunit interactions [active]"
/db_xref="CDD:188643"
misc_feature 807954..807956
/gene="mipB"
/locus_tag="SF0775"
/note="catalytic residue [active]"
/db_xref="CDD:188643"
gene complement(808543..809292)
/gene="moeB"
/locus_tag="SF0776"
/db_xref="GeneID:1023727"
CDS complement(808543..809292)
/gene="moeB"
/locus_tag="SF0776"
/note="Code: H; COG: COG0476"
/codon_start=1
/transl_table=11
/product="molybdopterin biosynthesis protein MoeB"
/protein_id="NP_706703.1"
/db_xref="GeneID:1023727"
/translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLVVGLGGLGC
AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIA
ITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ
ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKP
ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
misc_feature complement(808561..809292)
/gene="moeB"
/locus_tag="SF0776"
/note="molybdopterin biosynthesis protein MoeB;
Provisional; Region: PRK05690"
/db_xref="CDD:180204"
gene complement(809292..810527)
/gene="moeA"
/locus_tag="SF0777"
/db_xref="GeneID:1023734"
CDS complement(809292..810527)
/gene="moeA"
/locus_tag="SF0777"
/note="Code: H; COG: COG0303"
/codon_start=1
/transl_table=11
/product="molybdopterin biosynthesis protein MoeA"
/protein_id="NP_706704.1"
/db_xref="GeneID:1023734"
/translation="MEFTTGLMSLDTALNEMLSRVTPLTTQETLPLVQCFGRILASDV
VSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
PVPEGCEAVVMQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE
LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKMILEELGEIAFWKL
AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
VDVREWVEVEPFNALFGGL"
misc_feature complement(809295..810527)
/gene="moeA"
/locus_tag="SF0777"
/note="molybdopterin biosynthesis protein MoeA;
Provisional; Region: PRK10680"
/db_xref="CDD:182643"
gene 810731..811696
/gene="ybiK"
/locus_tag="SF0778"
/db_xref="GeneID:1023731"
CDS 810731..811696
/gene="ybiK"
/locus_tag="SF0778"
/note="Code: E; COG: COG1446"
/codon_start=1
/transl_table=11
/product="isoaspartyl peptidase"
/protein_id="NP_706705.1"
/db_xref="GeneID:1023731"
/translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE
AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH
LRNPVLAARLVMEQSPHVMMIGEGAENFAFAHGMERVSPEIFSTPLRYEQLLAAREEG
ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC
YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG
LIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ"
misc_feature 810731..811669
/gene="ybiK"
/locus_tag="SF0778"
/note="isoaspartyl peptidase; Provisional; Region:
PRK10226"
/db_xref="CDD:182319"
gene 811716..813554
/locus_tag="SF0779"
/db_xref="GeneID:1023721"
CDS 811716..813554
/locus_tag="SF0779"
/note="Code: R; COG: COG1123"
/codon_start=1
/transl_table=11
/product="glutathione ABC transporter ATP-binding protein"
/protein_id="NP_706706.2"
/db_xref="GeneID:1023721"
/translation="MLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGK
SVTALALMRLLEQAGGLVQCDKMLLRRRSRDVIELSEQSAAQMRHVRGADMAMIFQEP
MTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYSHQLSG
GMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDM
GVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRF
PLISLEHPAKQEPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSF
DLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDI
QFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYP
HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLF
ISHDMAVVERISHRVAVMYLGQIVEIGSRCAVFENPQHPYTRKLLAAVPVAEPSRQRP
QRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
misc_feature 811716..813551
/locus_tag="SF0779"
/note="glutathione transporter ATP-binding protein;
Provisional; Region: PRK10261"
/db_xref="CDD:182342"
gene 813574..815112
/locus_tag="SF0780"
/db_xref="GeneID:1026150"
CDS 813574..815112
/locus_tag="SF0780"
/note="Code: EP; COG: COG0747"
/codon_start=1
/transl_table=11
/product="glutathione ABC transporter substrate-binding
protein GsiB"
/protein_id="NP_706707.2"
/db_xref="GeneID:1026150"
/translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY
DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT
DFNAVAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAH
PATAMISPTALEKYGKEIGFHPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI
TWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVT
QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA
RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV
EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ
ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED
ADLQ"
misc_feature 813574..815109
/locus_tag="SF0780"
/note="glutathione ABC transporter substrate-binding
protein GsiB; Provisional; Region: PRK15413"
/db_xref="CDD:185311"
gene 815130..816050
/locus_tag="SF0781"
/db_xref="GeneID:1023769"
CDS 815130..816050
/locus_tag="SF0781"
/note="Code: EP; COG: COG0601"
/codon_start=1
/transl_table=11
/product="glutathione ABC transporter permease GsiC"
/protein_id="NP_706708.1"
/db_xref="GeneID:1023769"
/translation="MLYYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD
AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT
ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELG
WLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV
VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA
EILLFSLEFILINLVVDVLYAAINPAIRYK"
misc_feature 815130..816047
/locus_tag="SF0781"
/note="glutathione ABC transporter permease GsiC;
Provisional; Region: PRK15081"
/db_xref="CDD:185039"
gene 816053..816964
/locus_tag="SF0782"
/db_xref="GeneID:1026155"
CDS 816053..816964
/locus_tag="SF0782"
/note="Code: EP; COG: COG1173"
/codon_start=1
/transl_table=11
/product="glutathione ABC transporter permease GsiD"
/protein_id="NP_706709.1"
/db_xref="GeneID:1026155"
/translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
ISLAAGVFAVFIGVAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
LAIFLTVLAFNLLGDGLRDALDPKIKG"
misc_feature 816059..816961
/locus_tag="SF0782"
/note="glutathione ABC transporter permease GsiD;
Provisional; Region: PRK15082"
/db_xref="CDD:185040"
gene 817159..819484
/locus_tag="SF0783"
/pseudo
/db_xref="GeneID:1023786"
misc_feature 817159..819484
/locus_tag="SF0783"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787055 (783 aa). BLAST with
identity of 98% in 775 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 819492..820820
/locus_tag="SF0784"
/db_xref="GeneID:1023764"
CDS 819492..820820
/locus_tag="SF0784"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706710.1"
/db_xref="GeneID:1023764"
/translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
RFSLLSKSLVMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
AYKKDVYLRVCTLIIFFAALVAVILGASCLYLVRRVINRGIVEKEAIINNHFERVLDG
GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNI
NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI
VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
misc_feature 819567..820178
/locus_tag="SF0784"
/note="Gammaproteobacterial periplasmic sensor domain;
Region: GAPES2; pfam17156"
/db_xref="CDD:319174"
misc_feature 820374..820814
/locus_tag="SF0784"
/note="diguanylate cyclase; Region: GGDEF; smart00267"
/db_xref="CDD:128563"
misc_feature order(820470..820472,820602..820604)
/locus_tag="SF0784"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(820485..820487,820494..820499,820509..820511,
820521..820523,820590..820592,820596..820607)
/locus_tag="SF0784"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(820578..820580,820662..820664)
/locus_tag="SF0784"
/note="I-site [active]"
/db_xref="CDD:143635"
gene complement(820867..822192)
/gene="rimO"
/locus_tag="SF0785"
/db_xref="GeneID:1023760"
CDS complement(820867..822192)
/gene="rimO"
/locus_tag="SF0785"
/note="Code: J; COG: COG0621"
/codon_start=1
/transl_table=11
/product="ribosomal protein S12 methylthiotransferase"
/protein_id="NP_706711.1"
/db_xref="GeneID:1023760"
/translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
ANMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
misc_feature complement(820879..822168)
/gene="rimO"
/locus_tag="SF0785"
/note="ribosomal protein S12 methylthiotransferase RimO;
Region: TIGR01125"
/db_xref="CDD:273453"
gene 822405..822788
/gene="bssR"
/locus_tag="SF0786"
/db_xref="GeneID:1023773"
CDS 822405..822788
/gene="bssR"
/locus_tag="SF0786"
/codon_start=1
/transl_table=11
/product="biofilm formation regulatory protein BssR"
/protein_id="NP_706712.1"
/db_xref="GeneID:1023773"
/translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
KLENCLMSLTLSIQSLQKHAMLEKA"
misc_feature 822405..822782
/gene="bssR"
/locus_tag="SF0786"
/note="Biofilm formation protein (YliH/bssR); Region:
YliH; pfam10799"
/db_xref="CDD:313902"
gene 822899..823837
/gene="yliI"
/locus_tag="SF0787"
/db_xref="GeneID:1023736"
CDS 822899..823837
/gene="yliI"
/locus_tag="SF0787"
/note="Code: G; COG: COG2133"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="NP_706713.1"
/db_xref="GeneID:1023736"
/translation="MHRQSFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLP
DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWL
SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYL
FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQG
MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAG
TEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGS"
misc_feature 822998..823834
/gene="yliI"
/locus_tag="SF0787"
/note="Glucose / Sorbosone dehydrogenase; Region: GSDH;
pfam07995"
/db_xref="CDD:429776"
gene complement(824010..824642)
/gene="yliJ"
/locus_tag="SF0788"
/db_xref="GeneID:1023726"
CDS complement(824010..824642)
/gene="yliJ"
/locus_tag="SF0788"
/note="Code: O; COG: COG0625"
/codon_start=1
/transl_table=11
/product="transferase"
/protein_id="NP_706714.1"
/db_xref="GeneID:1023726"
/translation="MSMITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDA
DFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMD
WANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDE
FGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS"
misc_feature complement(824019..824636)
/gene="yliJ"
/locus_tag="SF0788"
/note="Glutathione S-transferase [Posttranslational
modification, protein turnover, chaperones]; Region: GstA;
COG0625"
/db_xref="CDD:440390"
gene 824861..825877
/locus_tag="SF0789"
/db_xref="GeneID:1023759"
CDS 824861..825877
/locus_tag="SF0789"
/note="Code: M; COG: COG1686"
/codon_start=1
/transl_table=11
/product="D-alanyl-D-alanine carboxypeptidase subunit A"
/protein_id="NP_706715.1"
/db_xref="GeneID:1023759"
/translation="MDTRVAFMTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSV
DARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGK
DAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIG
LMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFT
FNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRI
RFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKIEVNLGAGEAGSVRGSLSLT
DTPS"
misc_feature 824882..825853
/locus_tag="SF0789"
/note="serine-type D-Ala-D-Ala carboxypeptidase; Region:
PRK10001"
/db_xref="CDD:182189"
mobile_element 825843..827104
/mobile_element_type="insertion sequence:IS600"
gene 825906..826208
/locus_tag="SF0790"
/db_xref="GeneID:1023753"
CDS 825906..826208
/locus_tag="SF0790"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706716.1"
/db_xref="GeneID:1023753"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 825906..826178
/locus_tag="SF0790"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 826244..827062
/locus_tag="SF0791"
/db_xref="GeneID:1023771"
CDS 826244..827062
/locus_tag="SF0791"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706717.1"
/db_xref="GeneID:1023771"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATREGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <826244..827035
/locus_tag="SF0791"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 827089..827352
/locus_tag="SF0792"
/db_xref="GeneID:1023748"
CDS 827089..827352
/locus_tag="SF0792"
/codon_start=1
/transl_table=11
/product="D-alanyl-D-alanine carboxypeptidase subunit A"
/protein_id="NP_706718.1"
/db_xref="GeneID:1023748"
/translation="MPVHLTVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQ
LNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFHQWFGSWFS"
misc_feature <827104..827349
/locus_tag="SF0792"
/note="serine-type D-Ala-D-Ala carboxypeptidase; Region:
PRK10001"
/db_xref="CDD:182189"
gene complement(827399..828157)
/gene="deoR"
/locus_tag="SF0793"
/db_xref="GeneID:1023746"
CDS complement(827399..828157)
/gene="deoR"
/locus_tag="SF0793"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor DeoR"
/protein_id="NP_706719.1"
/db_xref="GeneID:1023746"
/translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
HSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
RMGDLKRFDIVVSDCCPEDEYVKYAQTHRIKLMY"
misc_feature complement(827402..828157)
/gene="deoR"
/locus_tag="SF0793"
/note="DNA-binding transcriptional repressor DeoR;
Provisional; Region: PRK10681"
/db_xref="CDD:182644"
gene complement(828215..828811)
/gene="ybjG"
/locus_tag="SF0794"
/db_xref="GeneID:1023763"
CDS complement(828215..828811)
/gene="ybjG"
/locus_tag="SF0794"
/note="Code: I; COG: COG0671"
/codon_start=1
/transl_table=11
/product="undecaprenyl pyrophosphate phosphatase"
/protein_id="NP_706720.2"
/db_xref="GeneID:1023763"
/translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAV
LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
CLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD"
misc_feature complement(828218..828811)
/gene="ybjG"
/locus_tag="SF0794"
/note="undecaprenyl pyrophosphate phosphatase;
Provisional; Region: PRK11837"
/db_xref="CDD:183335"
misc_feature complement(order(828365..828367,828377..828379,
828395..828397,828497..828505,828566..828568))
/gene="ybjG"
/locus_tag="SF0794"
/note="active site"
/db_xref="CDD:239480"
gene 829096..830322
/gene="cmr"
/locus_tag="SF0795"
/db_xref="GeneID:1023755"
CDS 829096..830322
/gene="cmr"
/locus_tag="SF0795"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="multidrug efflux system translocase MdfA"
/protein_id="NP_706721.1"
/db_xref="GeneID:1023755"
/translation="MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVV
EQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLA
QNIEQFTLLRFLQGISFCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLV
GAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETAMRIGEKLSLKELGRDYKLVLKN
GRFVAGALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARL
TSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVR
LTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSL
MVIFLKDKQMGNSHEG"
misc_feature 829114..830319
/gene="cmr"
/locus_tag="SF0795"
/note="MdfA family multidrug efflux MFS transporter;
Region: PRK15402"
/db_xref="CDD:185300"
gene complement(830363..830647)
/gene="ybjH"
/locus_tag="SF0796"
/db_xref="GeneID:1023747"
CDS complement(830363..830647)
/gene="ybjH"
/locus_tag="SF0796"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706722.1"
/db_xref="GeneID:1023747"
/translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
PQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH"
gene complement(830733..831521)
/locus_tag="SF0797"
/db_xref="GeneID:1023765"
CDS complement(830733..831521)
/locus_tag="SF0797"
/note="Code: R; COG: COG0561"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706723.2"
/db_xref="GeneID:1023765"
/translation="MDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLIS
FFPEIANEIAFVAENGGWVMSEGKDVFNGELSKDAFATVVEHLLTRPEVEIIACGKNS
AYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAI
GDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAG
FSFAMENAGSAVVAAAKYRAGYNNREGVLDVIDKVLKHEAPFDQ"
misc_feature complement(830769..831521)
/locus_tag="SF0797"
/note="Escherichia coli YbiV sugar
phosphatase/phosphotransferase and related proteins;
belongs to the haloacid dehalogenase-like superfamily;
Region: HAD_YbiV-Like; cd07518"
/db_xref="CDD:319820"
misc_feature complement(order(830892..830897,830901..830909,
830973..830975,830997..830999,831099..831101,
831105..831107,831348..831350,831411..831419,
831510..831521))
/locus_tag="SF0797"
/note="active site"
/db_xref="CDD:319820"
gene complement(831548..832756)
/locus_tag="SF0798"
/db_xref="GeneID:1023503"
CDS complement(831548..832756)
/locus_tag="SF0798"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="DeoR family transcriptional regulator"
/protein_id="NP_706724.1"
/db_xref="GeneID:1023503"
/translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS
PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLL
LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
SYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
TKTQTAMENS"
misc_feature complement(831617..832714)
/locus_tag="SF0798"
/note="Membrane protein MosC and similar proteins of the
Major Facilitator Superfamily of transporters; Region:
MFS_MosC_like; cd17393"
/db_xref="CDD:340951"
misc_feature complement(order(831701..831703,831710..831715,
831722..831727,831734..831736,831779..831781,
831791..831793,831803..831808,831953..831955,
831965..831967,832049..832051,832058..832066,
832073..832078,832085..832087,832304..832306,
832313..832318,832325..832327,832382..832384,
832391..832399,832403..832408,832565..832567,
832661..832663,832670..832675,832682..832687))
/locus_tag="SF0798"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340951"
gene 832840..833376
/locus_tag="SF0799"
/db_xref="GeneID:1023780"
CDS 832840..833376
/locus_tag="SF0799"
/note="Code: S; COG: COG3226"
/codon_start=1
/transl_table=11
/product="DeoR family transcriptional regulator"
/protein_id="NP_706725.2"
/db_xref="GeneID:1023780"
/translation="MRRANDPQRRGKMIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
RKPLSREEILRMVERVAG"
misc_feature 832840..833373
/locus_tag="SF0799"
/note="DNA-binding transcriptional regulator YbjK
[Transcription]; Region: YbjK; COG3226"
/db_xref="CDD:442459"
gene complement(833551..835236)
/locus_tag="SF0800"
/db_xref="GeneID:1023767"
CDS complement(833551..835236)
/locus_tag="SF0800"
/note="Code: R; COG: COG2985"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706726.1"
/db_xref="GeneID:1023767"
/translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLHHSGMESRQLSLALDNLS
LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
misc_feature complement(833563..835236)
/locus_tag="SF0800"
/note="putative transporter; Provisional; Region:
PRK04972"
/db_xref="CDD:179905"
gene 835506..835883
/gene="ybjM"
/locus_tag="SF0801"
/db_xref="GeneID:1023768"
CDS 835506..835883
/gene="ybjM"
/locus_tag="SF0801"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706727.1"
/db_xref="GeneID:1023768"
/translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
CALGALCFLFISSLFKPQHRKNQ"
misc_feature 835512..835856
/gene="ybjM"
/locus_tag="SF0801"
/note="Putative inner membrane protein of
Enterobacteriaceae; Region: YbjM; pfam11045"
/db_xref="CDD:431625"
gene complement(835913..836170)
/gene="grxA"
/locus_tag="SF0802"
/db_xref="GeneID:1023787"
CDS complement(835913..836170)
/gene="grxA"
/locus_tag="SF0802"
/note="Code: O; COG: COG0695"
/codon_start=1
/transl_table=11
/product="glutaredoxin"
/protein_id="NP_706728.2"
/db_xref="GeneID:1023787"
/translation="MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
misc_feature complement(835919..836170)
/gene="grxA"
/locus_tag="SF0802"
/note="glutaredoxin 1; Provisional; Region: grxA;
PRK11200"
/db_xref="CDD:183036"
misc_feature complement(order(835994..835999,836132..836140,
836147..836149))
/gene="grxA"
/locus_tag="SF0802"
/note="GSH binding site [chemical binding]; other site"
/db_xref="CDD:239017"
misc_feature complement(order(836129..836131,836138..836140))
/gene="grxA"
/locus_tag="SF0802"
/note="catalytic residues [active]"
/db_xref="CDD:239017"
gene 836330..836617
/gene="ybjC"
/locus_tag="SF0803"
/db_xref="GeneID:1023739"
CDS 836330..836617
/gene="ybjC"
/locus_tag="SF0803"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706729.1"
/db_xref="GeneID:1023739"
/translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNCPPQYSRSEREKDNDANH"
misc_feature 836330..836608
/gene="ybjC"
/locus_tag="SF0803"
/note="Protein of unknown function (DUF1418); Region:
DUF1418; cl11648"
/db_xref="CDD:386195"
mobile_element complement(836681..838009)
/mobile_element_type="insertion sequence:iso-IS10R"
gene complement(836694..837902)
/locus_tag="SF0804"
/db_xref="GeneID:1023756"
CDS complement(836694..837902)
/locus_tag="SF0804"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_706730.1"
/db_xref="GeneID:1023756"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature complement(836733..837788)
/locus_tag="SF0804"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene 837954..838661
/gene="mdaA"
/locus_tag="SF0805"
/db_xref="GeneID:1023762"
CDS 837954..838661
/gene="mdaA"
/locus_tag="SF0805"
/note="Code: C; COG: COG0778"
/codon_start=1
/transl_table=11
/product="nitroreductase A"
/protein_id="NP_706731.1"
/db_xref="GeneID:1023762"
/translation="MCIYLNLMILIKIIRGFISAQCEAIINSARATSSSSFLQCSSII
RITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLLLGVVD
TAMMAQNALTAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADNPD
LKPRLPASILVHENSYQPLDKDALAQYDEQLAEYYLTRGSNNRWDTWSDHIRRTIIKE
SRPFILDYLHKQGWATR"
misc_feature 837954..838658
/gene="mdaA"
/locus_tag="SF0805"
/note="oxygen-insensitive NADPH nitroreductase; Region:
PRK10765"
/db_xref="CDD:182710"
misc_feature order(838023..838025,838029..838037,838041..838052,
838059..838070,838074..838097,838104..838106,
838182..838184,838239..838247,838251..838256,
838263..838268,838275..838280,838287..838289,
838299..838304,838320..838322,838335..838337,
838365..838370,838374..838376,838395..838397,
838437..838448,838452..838454,838458..838469,
838512..838514,838572..838577,838584..838586,
838596..838613)
/gene="mdaA"
/locus_tag="SF0805"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:380322"
misc_feature order(838050..838058,838062..838064,838137..838139,
838143..838145,838254..838259,838266..838268,
838317..838331,838437..838439,838443..838445)
/gene="mdaA"
/locus_tag="SF0805"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:380322"
misc_feature order(838062..838064,838335..838340,838431..838433,
838437..838439,838533..838538,838545..838547)
/gene="mdaA"
/locus_tag="SF0805"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:380322"
gene 838722..839624
/gene="rimK"
/locus_tag="SF0806"
/db_xref="GeneID:1026162"
CDS 838722..839624
/gene="rimK"
/locus_tag="SF0806"
/note="Code: HJ; COG: COG0189"
/codon_start=1
/transl_table=11
/product="ribosomal protein S6 modification protein"
/protein_id="NP_706732.1"
/db_xref="GeneID:1026162"
/translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
ASSIYYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGYFRSNLHRGG
AASVASITLQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
DIAGKMIRWIERHATTEYCLKTGG"
misc_feature 838722..839621
/gene="rimK"
/locus_tag="SF0806"
/note="30S ribosomal protein S6--L-glutamate ligase;
Region: PRK10446"
/db_xref="CDD:182468"
gene 839712..840188
/gene="ybjN"
/locus_tag="SF0807"
/db_xref="GeneID:1023761"
CDS 839712..840188
/gene="ybjN"
/locus_tag="SF0807"
/codon_start=1
/transl_table=11
/product="sensory transduction regulator"
/protein_id="NP_706733.2"
/db_xref="GeneID:1023761"
/translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
misc_feature 839736..840104
/gene="ybjN"
/locus_tag="SF0807"
/note="Putative bacterial sensory transduction regulator;
Region: YbjN; pfam10722"
/db_xref="CDD:431456"
gene 840540..841652
/gene="potF"
/locus_tag="SF0808"
/db_xref="GeneID:1023750"
CDS 840540..841652
/gene="potF"
/locus_tag="SF0808"
/note="Code: E; COG: COG0687"
/codon_start=1
/transl_table=11
/product="putrescine ABC transporter substrate-binding
protein"
/protein_id="NP_706734.2"
/db_xref="GeneID:1023750"
/translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD
TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYVNANKAATPLVSAEVRENPG
IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
misc_feature 840540..841649
/gene="potF"
/locus_tag="SF0808"
/note="putrescine transporter subunit: periplasmic-binding
component of ABC superfamily; Provisional; Region:
PRK10682"
/db_xref="CDD:182645"
misc_feature order(840648..840650,841269..841271,841278..841280,
841365..841367,841371..841373,841479..841481)
/gene="potF"
/locus_tag="SF0808"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270377"
misc_feature order(840681..840683,840690..840695,841443..841448)
/gene="potF"
/locus_tag="SF0808"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:270377"
gene 841666..842880
/gene="potG"
/locus_tag="SF0809"
/db_xref="GeneID:1023804"
CDS 841666..842880
/gene="potG"
/locus_tag="SF0809"
/note="Code: G; COG: COG1130"
/codon_start=1
/transl_table=11
/product="putrescine ABC transporter ATP-binding protein"
/protein_id="NP_706735.3"
/db_xref="GeneID:1023804"
/translation="MPGGRTTPAGNSHHHGALAHIQCRRAAVNDAIPRPQAKTRKALT
PLLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQ
IMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEISSRVNEM
LGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLE
VVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEF
IGSVNVFEGVLKERQEDGLVLDSPGLVHPLKVDADASVVDNVPVHVALRPEKIMLCEE
PPANGCNFAVGEVIHIAYLGDLSVYHVRLKSGQMISAQLQNAHRHRKGLPTWGDEVRL
CWEVDSCVVLTV"
misc_feature 841747..842877
/gene="potG"
/locus_tag="SF0809"
/note="putrescine ABC transporter ATP-binding subunit
PotG; Region: potG; PRK11607"
/db_xref="CDD:183226"
gene 842890..843843
/gene="potH"
/locus_tag="SF0810"
/db_xref="GeneID:1023797"
CDS 842890..843843
/gene="potH"
/locus_tag="SF0810"
/note="Code: E; COG: COG1176"
/codon_start=1
/transl_table=11
/product="putrescine ABC transporter permease"
/protein_id="NP_706736.1"
/db_xref="GeneID:1023797"
/translation="MNTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA
LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
EFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
misc_feature 842890..843840
/gene="potH"
/locus_tag="SF0810"
/note="putrescine transporter subunit: membrane component
of ABC superfamily; Provisional; Region: PRK10683"
/db_xref="CDD:182646"
misc_feature order(843232..843237,843244..843249,843262..843264,
843292..843303,843307..843336,843343..843348,
843391..843393,843466..843471,843475..843477,
843481..843483,843490..843495,843499..843501,
843511..843516,843523..843525,843574..843576,
843616..843621,843628..843630,843649..843660,
843667..843672,843703..843708,843736..843741,
843748..843753,843757..843762,843769..843774,
843781..843786)
/gene="potH"
/locus_tag="SF0810"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(843310..843351,843391..843393,843649..843666)
/gene="potH"
/locus_tag="SF0810"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature order(843391..843393,843451..843453,843667..843669,
843706..843708,843736..843738)
/gene="potH"
/locus_tag="SF0810"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature order(843526..843564,843580..843585,843595..843597)
/gene="potH"
/locus_tag="SF0810"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene 843840..844685
/gene="potI"
/locus_tag="SF0811"
/db_xref="GeneID:1023801"
CDS 843840..844685
/gene="potI"
/locus_tag="SF0811"
/note="Code: E; COG: COG1177"
/codon_start=1
/transl_table=11
/product="putrescine ABC transporter permease"
/protein_id="NP_706737.2"
/db_xref="GeneID:1023801"
/translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
GGWSTRWYGELLRDDAMMSAVGSSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
RARRG"
misc_feature 843840..844682
/gene="potI"
/locus_tag="SF0811"
/note="putrescine transporter subunit: membrane component
of ABC superfamily; Provisional; Region: PRK10592"
/db_xref="CDD:182574"
misc_feature order(844083..844085,844092..844097,844110..844112,
844143..844154,844158..844187,844194..844199,
844203..844205,844281..844283,844287..844289,
844293..844295,844299..844301,844308..844313,
844317..844319,844329..844334,844341..844343,
844392..844394,844434..844439,844446..844448,
844467..844478,844485..844490,844527..844532,
844560..844565,844572..844577,844581..844586,
844593..844598,844605..844607)
/gene="potI"
/locus_tag="SF0811"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(844161..844205,844467..844484)
/gene="potI"
/locus_tag="SF0811"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature order(844203..844205,844266..844268,844485..844487,
844521..844523,844530..844532,844560..844562)
/gene="potI"
/locus_tag="SF0811"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature order(844344..844382,844398..844403,844413..844415)
/gene="potI"
/locus_tag="SF0811"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene 844745..845233
/gene="ybjO"
/locus_tag="SF0812"
/db_xref="GeneID:1026878"
CDS 844745..845233
/gene="ybjO"
/locus_tag="SF0812"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706738.2"
/db_xref="GeneID:1026878"
/translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
LQ"
misc_feature 844805..845227
/gene="ybjO"
/locus_tag="SF0812"
/note="Protein of unknown function (DUF2593); Region:
DUF2593; pfam10767"
/db_xref="CDD:431483"
gene 845274..846401
/gene="rumB"
/locus_tag="SF0813"
/db_xref="GeneID:1023798"
CDS 845274..846401
/gene="rumB"
/locus_tag="SF0813"
/note="Code: J; COG: COG2265"
/codon_start=1
/transl_table=11
/product="23S rRNA (uracil(747)-C(5))-methyltransferase
RlmC"
/protein_id="NP_706739.1"
/db_xref="GeneID:1023798"
/translation="MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEW
CAPVSGPEQGFRNKAKMVVSGSVEKTLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLHE
QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA
SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAA
ELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
NAQTMAKDIRELPGYRIERVQLFDMFPHTAHYEVLTLLVKQ"
misc_feature 845277..846395
/gene="rumB"
/locus_tag="SF0813"
/note="23S rRNA (uracil-5-)-methyltransferase RumB;
Region: meth_trns_rumB; TIGR02085"
/db_xref="CDD:131140"
misc_feature order(845991..846011,846057..846062,846135..846143,
846192..846194)
/gene="rumB"
/locus_tag="SF0813"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(846576..847307)
/gene="artJ"
/locus_tag="SF0814"
/db_xref="GeneID:1023757"
CDS complement(846576..847307)
/gene="artJ"
/locus_tag="SF0814"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="arginine ABC transporter substrate-binding
protein"
/protein_id="NP_706740.2"
/db_xref="GeneID:1023757"
/translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
PYYENSAVVISKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
KLNNALAAIKADGTYQKINDQWFPQ"
misc_feature complement(846585..847250)
/gene="artJ"
/locus_tag="SF0814"
/note="Substrate binding domain of arginine-specific ABC
transporter; type 2 periplasmic-binding protein fold;
Region: PBP2_Arg_STM4351; cd13700"
/db_xref="CDD:270418"
misc_feature complement(order(846786..846788,846897..846905,
846912..846914,847026..847028,847041..847046,
847050..847052,847101..847103,847215..847217,
847224..847226))
/gene="artJ"
/locus_tag="SF0814"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:270418"
gene complement(847599..848267)
/gene="artM"
/locus_tag="SF0815"
/db_xref="GeneID:1023792"
CDS complement(847599..848267)
/gene="artM"
/locus_tag="SF0815"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="arginine transporter permease subunit ArtM"
/protein_id="NP_706741.1"
/db_xref="GeneID:1023792"
/translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS
AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
ERRN"
misc_feature complement(847602..848267)
/gene="artM"
/locus_tag="SF0815"
/note="arginine ABC transporter permease ArtM; Region:
artM; PRK11122"
/db_xref="CDD:182978"
gene complement(848267..848983)
/gene="artQ"
/locus_tag="SF0816"
/db_xref="GeneID:1023776"
CDS complement(848267..848983)
/gene="artQ"
/locus_tag="SF0816"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="arginine transporter permease subunit ArtQ"
/protein_id="NP_706742.1"
/db_xref="GeneID:1023776"
/translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVA
WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH
ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
SQYILKRIDLRATRFERRPS"
misc_feature complement(848270..848983)
/gene="artQ"
/locus_tag="SF0816"
/note="arginine ABC transporter permease ArtQ; Region:
PRK11123"
/db_xref="CDD:182979"
misc_feature complement(order(848333..848338,848345..848350,
848354..848359,848366..848371,848399..848404,
848441..848446,848453..848464,848483..848485,
848492..848497,848537..848539,848588..848590,
848597..848602,848612..848614,848618..848623,
848630..848632,848636..848638,848642..848647,
848783..848785,848789..848794,848801..848830,
848834..848845,848873..848875,848888..848893,
848900..848905))
/gene="artQ"
/locus_tag="SF0816"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(848447..848464,848783..848827))
/gene="artQ"
/locus_tag="SF0816"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(848369..848371,848399..848401,
848408..848410,848444..848446,848660..848662,
848783..848785))
/gene="artQ"
/locus_tag="SF0816"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(848516..848518,848528..848533,
848549..848587))
/gene="artQ"
/locus_tag="SF0816"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(848990..849721)
/gene="artI"
/locus_tag="SF0817"
/db_xref="GeneID:1023758"
CDS complement(848990..849721)
/gene="artI"
/locus_tag="SF0817"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="arginine ABC transporter substrate-binding
protein"
/protein_id="NP_706743.1"
/db_xref="GeneID:1023758"
/translation="MKKVLIAALIAGFSLSATAAETIRFATEAPYPPFESIDANNQIV
GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK
LDLQNGRIDSVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
KLNTALEKVKKDGTYETIYNKWFQK"
misc_feature complement(848993..849721)
/gene="artI"
/locus_tag="SF0817"
/note="arginine ABC transporter substrate-binding protein;
Region: PRK15007"
/db_xref="CDD:184969"
gene complement(849739..850467)
/gene="artP"
/locus_tag="SF0818"
/db_xref="GeneID:1023793"
CDS complement(849739..850467)
/gene="artP"
/locus_tag="SF0818"
/note="Code: E; COG: COG1126"
/codon_start=1
/transl_table=11
/product="arginine transporter ATP-binding subunit"
/protein_id="NP_706744.2"
/db_xref="GeneID:1023793"
/translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
IVEQGDASCFTEPQTEAFKNYLSH"
misc_feature complement(849742..850467)
/gene="artP"
/locus_tag="SF0818"
/note="arginine transporter ATP-binding subunit;
Provisional; Region: artP; PRK11124"
/db_xref="CDD:182980"
gene complement(850685..851200)
/gene="ybjP"
/locus_tag="SF0819"
/db_xref="GeneID:1023795"
CDS complement(850685..851200)
/gene="ybjP"
/locus_tag="SF0819"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_706745.2"
/db_xref="GeneID:1023795"
/translation="MRYRSLSLLIPCALLLSACTTVTPAYKDNGPRTGSCVQGGPDSV
AQQFYDYRIQHRSNDITALRPYLSDKLATQLSDASRDNSHRELLSSDPFSSRTTLPDS
AHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
AGTLRQSIENR"
misc_feature complement(850688..851200)
/gene="ybjP"
/locus_tag="SF0819"
/note="putative lipoprotein; Provisional; Region:
PRK10533"
/db_xref="CDD:182526"
gene 851849..853618
/locus_tag="SF0820"
/db_xref="GeneID:1023809"
CDS 851849..853618
/locus_tag="SF0820"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706746.2"
/db_xref="GeneID:1023809"
/translation="MINNISDQASSFPGTQLNQSDNFLDSLREFFAILNPSRKGELST
WDTIYLHLILAINADSDLIKNDVLLAENIPSANYQFNTFFSNTFEIDVKKYLGKSEDN
EVEIKAGNERISIGIRNVSNGKLERQQFLFPLDYENKLQEQLDKYFTIESHPLLYRYT
IGSKIANVIFEKLYSRIDFNKEQYISFIKDAFIHFYDYSRRYAISENIDKDAVTNNIA
LMSTFYDSDNTSGEVLNNDFTEEESFETALDVEHAIVLGFADDNFETKPVHYQDLLTR
FSAFQDTVFNLFPEMHSSHYHDICSVSVDMTKGTQCMIHLMVNEEVFMSLPVPVATMV
REDASNLVNLKTLLNDGCFIKYSHFNDVALIKQNISNLYLSHTVVNESILKKCCFENG
SLGDVKITNSNVINSAFKNISFRSVKINNVNTHSLKFINCNFFNVDMIRVNLSKCLFH
ECSMHGVKIKPWLPVKWTKELISDYLYGCLLSLYSICARDIYNMNAGNNVKVAADAFL
EIIFSLKNKYCIKLLSAQDRAFIYEFARMIFAYINDKSIEILLLSCFAAADQKAIQRY
RPQSQDGEDFRSHLQYKLPLSAH"
misc_feature 852998..>853219
/locus_tag="SF0820"
/note="Uncharacterized conserved protein YjbI, contains
pentapeptide repeats [Function unknown]; Region: YjbI;
COG1357"
/db_xref="CDD:440968"
gene 853829..854152
/locus_tag="SF0821"
/db_xref="GeneID:1023799"
CDS 853829..854152
/locus_tag="SF0821"
/note="Code: S; COG: COG0393"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706747.1"
/db_xref="GeneID:1023799"
/translation="MQFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
VKTRR"
misc_feature 853829..854146
/locus_tag="SF0821"
/note="hypothetical protein; Provisional; Region:
PRK02877"
/db_xref="CDD:179490"
gene 854149..854979
/locus_tag="SF0822"
/db_xref="GeneID:1023783"
CDS 854149..854979
/locus_tag="SF0822"
/note="Code: M; COG: COG3023"
/codon_start=1
/transl_table=11
/product="regulator"
/protein_id="NP_706748.1"
/db_xref="GeneID:1023783"
/translation="MRRVFWLVAAALLLAGCAGEKGIVEKEGYQLDTRHQAQAAYPRI
KVLVIHYTADDFDSSLATLTDKQVSSHYLIPAVPPRYNGKPRIWQLVPEQELAWHAGI
SAWRGATRLNDTSIGIELENRGWQKSSGVKYFAPFEQAQIQALIPLAKDIIARYHIKP
ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLDKYGQD
"
misc_feature 854275..854715
/locus_tag="SF0822"
/note="N-acetyl-anhydromuramyl-L-alanine amidase AmpD
[Cell wall/membrane/envelope biogenesis]; Region: AmpD;
COG3023"
/db_xref="CDD:442259"
gene complement(854976..856025)
/locus_tag="SF0823"
/db_xref="GeneID:1026170"
CDS complement(854976..856025)
/locus_tag="SF0823"
/note="Code: MG; COG: COG0451"
/codon_start=1
/transl_table=11
/product="nucleotide di-P-sugar epimerase or dehydratase"
/protein_id="NP_706749.2"
/db_xref="GeneID:1026170"
/translation="MRTSFSQQQWIDMKVLVTGATSGLGRNAVEFLCQKGISVRASGR
NEAMGKLLEKMGAEFVPTDLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLAN
VRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRNIKEDFRPHRFANEFARSKAASE
EVINMLSQANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMT
YYENAVHAMWLASQEACDKLPSGRVYNITNGEHRTLRSIVQKLIDELNIDCRIRSVPY
PMLDMIARSMERLGRKSAKEPPLTHYGASKLNFDFTLDITRAQEELGYQPVITLDEGI
EKTAAWLRDHGKLPR"
misc_feature complement(854997..855986)
/locus_tag="SF0823"
/note="Nucleoside-diphosphate-sugar epimerase [Cell
wall/membrane/envelope biogenesis]; Region: WcaG; COG0451"
/db_xref="CDD:440220"
gene complement(856088..857518)
/gene="ybjT"
/locus_tag="SF0824"
/db_xref="GeneID:1023800"
CDS complement(856088..857518)
/gene="ybjT"
/locus_tag="SF0824"
/note="Code: MG; COG: COG0702"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706750.2"
/db_xref="GeneID:1023800"
/translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL
ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQLALNVRDALREVP
VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPANEHRIFEAAGPEVLSYQQQ
FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
SASLAALWLVVNQIGGKERYFFGNILWQTRALMDRAIGHNLAKGRPEREYLQTGDAVD
SWKVIVVEPKKQLTLLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLFYWL
LMIPAHLFIFRGMAKQIARLAEQSTD"
misc_feature complement(856631..857506)
/gene="ybjT"
/locus_tag="SF0824"
/note="atypical (a) SDRs, subgroup 2; Region: SDR_a2;
cd05245"
/db_xref="CDD:187556"
misc_feature complement(order(857075..857086,857141..857143,
857153..857155,857186..857194,857294..857302,
857414..857422,857477..857479,857483..857488,
857492..857494))
/gene="ybjT"
/locus_tag="SF0824"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187556"
misc_feature complement(order(857141..857143,857153..857155))
/gene="ybjT"
/locus_tag="SF0824"
/note="putative active site [active]"
/db_xref="CDD:187556"
misc_feature complement(856130..856519)
/gene="ybjT"
/locus_tag="SF0824"
/note="Protein of unknown function (DUF2867); Region:
DUF2867; pfam11066"
/db_xref="CDD:431633"
gene complement(857529..858530)
/gene="ybjU"
/locus_tag="SF0825"
/db_xref="GeneID:1023782"
CDS complement(857529..858530)
/gene="ybjU"
/locus_tag="SF0825"
/note="Code: E; COG: COG2008"
/codon_start=1
/transl_table=11
/product="L-threonine aldolase"
/protein_id="NP_706751.1"
/db_xref="GeneID:1023782"
/translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP
IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
RWRKMAGGGMRQSGILAAAGMYALENNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
MLFVRVGEENAAALGEYMKARNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR"
misc_feature complement(857532..858530)
/gene="ybjU"
/locus_tag="SF0825"
/note="L-threonine aldolase; Provisional; Region:
PRK10534"
/db_xref="CDD:236710"
misc_feature complement(order(857625..857627,857829..857834,
857862..857867,857874..857879,857922..857924,
857940..857945,858228..858236,858255..858278,
858330..858332,858351..858356,858363..858365,
858465..858473,858480..858482,858498..858509,
858516..858518))
/gene="ybjU"
/locus_tag="SF0825"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:99748"
misc_feature complement(order(857940..857942,857949..857951,
858024..858026,858033..858035,858123..858125,
858345..858347,858354..858359))
/gene="ybjU"
/locus_tag="SF0825"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99748"
misc_feature complement(857940..857942)
/gene="ybjU"
/locus_tag="SF0825"
/note="catalytic residue [active]"
/db_xref="CDD:99748"
gene complement(858567..860285)
/gene="poxB"
/locus_tag="SF0826"
/db_xref="GeneID:1023788"
CDS complement(858567..860285)
/gene="poxB"
/locus_tag="SF0826"
/note="Code: EH; COG: COG0028"
/codon_start=1
/transl_table=11
/product="pyruvate dehydrogenase"
/protein_id="NP_706752.1"
/db_xref="GeneID:1023788"
/translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNNVPVLAIAAHI
PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
GDVALKPAPEGATTHWYHAPQPVVMPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF
PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKTDRKFLDK
ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
LPVKIIVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD
EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
KTNWLR"
misc_feature complement(858570..860285)
/gene="poxB"
/locus_tag="SF0826"
/note="ubiquinone-dependent pyruvate dehydrogenase;
Region: PRK09124"
/db_xref="CDD:181661"
gene complement(860418..861386)
/locus_tag="SF0827"
/db_xref="GeneID:1023794"
CDS complement(860418..861386)
/locus_tag="SF0827"
/note="Code: C; COG: COG1018"
/codon_start=1
/transl_table=11
/product="HCP oxidoreductase, NADH-dependent"
/protein_id="NP_706753.2"
/db_xref="GeneID:1023794"
/translation="MTMPTNQCPWRIQVHHITQETPDVWTISLICHDHYPYRAGQYAL
VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEW
RNYPVTLVAENNVTEGFIAGRLTRELLADVPDLASRTVMTCGPAPYMDWVEQEVKALG
VTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
misc_feature complement(860421..861386)
/locus_tag="SF0827"
/note="HCP oxidoreductase, NADH-dependent; Provisional;
Region: PRK10684"
/db_xref="CDD:236735"
gene complement(861398..863056)
/gene="ybjW"
/locus_tag="SF0828"
/db_xref="GeneID:1023784"
CDS complement(861398..863056)
/gene="ybjW"
/locus_tag="SF0828"
/note="Code: C; COG: COG1151"
/codon_start=1
/transl_table=11
/product="prismane HCP protein"
/protein_id="NP_706754.3"
/db_xref="GeneID:1023784"
/translation="MIMFCVQCEQTIRTPAENGCSYAQGMCGKTAETSDLQDLLIAAL
QGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKA
QCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYG
LKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMS
ILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEM
LPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWT
RSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDL
VSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEG
LPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLG
VKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLNA"
misc_feature complement(861401..863050)
/gene="ybjW"
/locus_tag="SF0828"
/note="hybrid cluster protein; Provisional; Region:
PRK05290"
/db_xref="CDD:235391"
misc_feature complement(order(862976..862978,862997..862999,
863033..863035,863042..863044))
/gene="ybjW"
/locus_tag="SF0828"
/note="cubane metal cluster [ion binding]; other site"
/db_xref="CDD:238895"
misc_feature complement(order(861575..861577,861677..861679,
861752..861754,861836..861838,862100..862102,
862232..862234,862304..862306))
/gene="ybjW"
/locus_tag="SF0828"
/note="hybrid metal cluster [active]"
/db_xref="CDD:238895"
gene complement(863194..864141)
/gene="ybjE"
/locus_tag="SF0829"
/db_xref="GeneID:1027555"
CDS complement(863194..864141)
/gene="ybjE"
/locus_tag="SF0829"
/note="Code: S; COG: COG2431"
/codon_start=1
/transl_table=11
/product="surface protein"
/protein_id="NP_706755.1"
/db_xref="GeneID:1027555"
/translation="MCHRAFRLLLCKDWIFMFSGLLIILVPLIVGYLIPLRQQAALKA
INQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERG
LPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLL
FLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASG
FGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSM
DFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA"
misc_feature complement(863197..863778)
/gene="ybjE"
/locus_tag="SF0829"
/note="Lysine export protein LysO/YbjE, DUF340 family
[Amino acid transport and metabolism]; Region: LysO;
COG2431"
/db_xref="CDD:441979"
mobile_element complement(864208..865538)
/mobile_element_type="insertion sequence:IS2"
gene complement(864219..865124)
/locus_tag="SF0830"
/db_xref="GeneID:1023785"
CDS complement(864219..865124)
/locus_tag="SF0830"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_706756.1"
/db_xref="GeneID:1023785"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(864222..865124)
/locus_tag="SF0830"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(865082..865492)
/locus_tag="SF0831"
/db_xref="GeneID:1023831"
CDS complement(865082..865492)
/locus_tag="SF0831"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706757.1"
/db_xref="GeneID:1023831"
/translation="MIVLILVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(865085..865447)
/locus_tag="SF0831"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene complement(865890..866585)
/gene="aqpZ"
/locus_tag="SF0832"
/db_xref="GeneID:1023778"
CDS complement(865890..866585)
/gene="aqpZ"
/locus_tag="SF0832"
/note="Code: G; COG: COG0580"
/codon_start=1
/transl_table=11
/product="aquaporin Z"
/protein_id="NP_706758.2"
/db_xref="GeneID:1023778"
/translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG
LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI
ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG
FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII
GGLIYRTLLEKRD"
misc_feature complement(865893..866585)
/gene="aqpZ"
/locus_tag="SF0832"
/note="aquaporin Z; Provisional; Region: PRK05420"
/db_xref="CDD:235453"
misc_feature complement(order(866019..866021,866028..866030,
866037..866042,866397..866405,866457..866459))
/gene="aqpZ"
/locus_tag="SF0832"
/note="amphipathic channel [active]"
/db_xref="CDD:238204"
misc_feature complement(order(866022..866030,866391..866399))
/gene="aqpZ"
/locus_tag="SF0832"
/note="Asn-Pro-Ala signature motifs; other site"
/db_xref="CDD:238204"
mobile_element complement(866622..867389)
/mobile_element_type="insertion sequence:IS1"
gene complement(866637..867140)
/gene="insB"
/locus_tag="SF0833"
/db_xref="GeneID:1023777"
CDS complement(866637..867140)
/gene="insB"
/locus_tag="SF0833"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706759.2"
/db_xref="GeneID:1023777"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYACDRIRRTAVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature complement(866640..867032)
/gene="insB"
/locus_tag="SF0833"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(867059..867334)
/gene="insA"
/locus_tag="SF0834"
/db_xref="GeneID:1023779"
CDS complement(867059..867334)
/gene="insA"
/locus_tag="SF0834"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706760.1"
/db_xref="GeneID:1023779"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YIASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<867062..867313)
/gene="insA"
/locus_tag="SF0834"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 867786..869444
/gene="ybjD"
/locus_tag="SF0835"
/db_xref="GeneID:1023817"
CDS 867786..869444
/gene="ybjD"
/locus_tag="SF0835"
/note="Code: L; COG: COG3593"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706761.1"
/db_xref="GeneID:1023817"
/translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA
KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
misc_feature 867786..868910
/gene="ybjD"
/locus_tag="SF0835"
/note="Protein of unknown function (DUF2813); Region:
DUF2813; pfam11398"
/db_xref="CDD:431868"
misc_feature 868911..869201
/gene="ybjD"
/locus_tag="SF0835"
/note="topoisomerase-primase (TOPRIM) nucleotidyl
transferase/hydrolase domain of the type found in
bacterial and archaeal nucleases of the OLD (overcome
lysogenization defect) family. The bacteriophage P2 OLD
protein, which has DNase as well as RNase activity;
Region: TOPRIM_OLD; cd01026"
/db_xref="CDD:173776"
misc_feature order(868938..868943,868950..868952,869097..869099,
869103..869105)
/gene="ybjD"
/locus_tag="SF0835"
/note="putative active site [active]"
/db_xref="CDD:173776"
misc_feature order(868938..868940,869097..869099)
/gene="ybjD"
/locus_tag="SF0835"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173776"
gene complement(869441..870433)
/gene="ybjX"
/locus_tag="SF0836"
/db_xref="GeneID:1023781"
CDS complement(869441..870433)
/gene="ybjX"
/locus_tag="SF0836"
/note="Code: S; COG: COG2990"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706762.1"
/db_xref="GeneID:1023781"
/translation="MVKSTSCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCR
PGKFWHRCSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLA
ANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMI
SMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATK
ACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWE
SVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG"
misc_feature complement(869447..870319)
/gene="ybjX"
/locus_tag="SF0836"
/note="Outer membrane protein VirK/YbjX involved in
antimicrobial peptide resistance, DUF535 family [Function
unknown]; Region: VirK; COG2990"
/db_xref="CDD:442229"
gene 870502..870636
/locus_tag="SF0837"
/db_xref="GeneID:1023820"
CDS 870502..870636
/locus_tag="SF0837"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706763.1"
/db_xref="GeneID:1023820"
/translation="MKLMTRIGIWSIQNIYEKAENREEALRYCAGDSHRRTDYVMENS
"
gene 870548..871663
/locus_tag="SF0838"
/db_xref="GeneID:1023829"
CDS 870548..871663
/locus_tag="SF0838"
/note="Code: Q; COG: COG0845"
/codon_start=1
/transl_table=11
/product="macrolide transporter subunit MacA"
/protein_id="NP_706764.2"
/db_xref="GeneID:1023829"
/translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQI
GTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
DMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
misc_feature 870548..871657
/locus_tag="SF0838"
/note="macrolide transporter subunit MacA; Provisional;
Region: PRK11578"
/db_xref="CDD:183211"
gene 871660..873606
/gene="ybjZ"
/locus_tag="SF0839"
/db_xref="GeneID:1023822"
CDS 871660..873606
/gene="ybjZ"
/locus_tag="SF0839"
/note="Code: R; COG: COG0577"
/codon_start=1
/transl_table=11
/product="macrolide transporter ATP-binding /permease"
/protein_id="NP_706765.1"
/db_xref="GeneID:1023822"
/translation="MTPLLELKDIRRSYPAGDEQVEVLKGISLNIYAGEMVAIVGASG
SGKSTLMNILGCLDKATSGTYRVAGQDIATLDADALAQLRREHFGFIFQRYHLLPHLT
VEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRD
GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTAT
GILFGWLPARNAARLDPVDALARE"
misc_feature 871660..873603
/gene="ybjZ"
/locus_tag="SF0839"
/note="macrolide ABC transporter ATP-binding
protein/permease MacB; Region: PRK10535"
/db_xref="CDD:182528"
gene complement(873679..873903)
/gene="cspD"
/locus_tag="SF0840"
/db_xref="GeneID:1027556"
CDS complement(873679..873903)
/gene="cspD"
/locus_tag="SF0840"
/note="Code: K; COG: COG1278"
/codon_start=1
/transl_table=11
/product="stationary phase/starvation inducible regulatory
protein CspD"
/protein_id="NP_706766.1"
/db_xref="GeneID:1027556"
/translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
misc_feature complement(873682..873903)
/gene="cspD"
/locus_tag="SF0840"
/note="Ribosomal protein S1-like RNA-binding domain. Found
in a wide variety of RNA-associated proteins. Originally
identified in S1 ribosomal protein. This superfamily also
contains the Cold Shock Domain (CSD), which is a homolog
of the S1 domain. Both domains...; Region: S1_like;
cl09927"
/db_xref="CDD:471952"
misc_feature complement(order(873733..873735,873820..873822,
873853..873855,873880..873882))
/gene="cspD"
/locus_tag="SF0840"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:239905"
misc_feature complement(order(873814..873825,873844..873864))
/gene="cspD"
/locus_tag="SF0840"
/note="RNA-binding motif [active]"
/db_xref="CDD:239905"
gene 874226..874546
/gene="clpS"
/locus_tag="SF0841"
/db_xref="GeneID:1023774"
CDS 874226..874546
/gene="clpS"
/locus_tag="SF0841"
/note="Code: S; COG: COG2127"
/codon_start=1
/transl_table=11
/product="ATP-dependent Clp protease adaptor protein ClpS"
/protein_id="NP_706767.1"
/db_xref="GeneID:1023774"
/translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
LEKA"
misc_feature 874226..874543
/gene="clpS"
/locus_tag="SF0841"
/note="ATP-dependent Clp protease adaptor protein ClpS;
Reviewed; Region: clpS; PRK00033"
/db_xref="CDD:178809"
gene 874577..876853
/gene="clpA"
/locus_tag="SF0842"
/db_xref="GeneID:1023790"
CDS 874577..876853
/gene="clpA"
/locus_tag="SF0842"
/note="Code: O; COG: COG0542"
/codon_start=1
/transl_table=11
/product="ATP-dependent Clp protease ATP-binding subunit"
/protein_id="NP_706768.2"
/db_xref="GeneID:1023790"
/translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
RALARRSQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
KLSDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
ELTYGFQSAQKHKAEAAH"
misc_feature 874577..876850
/gene="clpA"
/locus_tag="SF0842"
/note="ATP-dependent Clp protease ATP-binding subunit;
Provisional; Region: clpA; PRK11034"
/db_xref="CDD:236828"
gene complement(877256..877343)
/locus_tag="SF4463"
/db_xref="GeneID:3161812"
tRNA complement(877256..877343)
/locus_tag="SF4463"
/product="tRNA-Ser"
/codon_recognized="UCC"
/db_xref="GeneID:3161812"
gene complement(877597..877815)
/gene="infA"
/locus_tag="SF0843"
/db_xref="GeneID:1023818"
CDS complement(877597..877815)
/gene="infA"
/locus_tag="SF0843"
/note="Code: J; COG: COG0361"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-1"
/protein_id="NP_706769.1"
/db_xref="GeneID:1023818"
/translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
IRILTGDKVTVELTPYDLSKGRIVFRSR"
misc_feature complement(877600..877815)
/gene="infA"
/locus_tag="SF0843"
/note="translation initiation factor IF-1; Validated;
Region: infA; PRK00276"
/db_xref="CDD:178954"
misc_feature complement(order(877618..877620,877624..877626,
877675..877686,877699..877704,877711..877713,
877747..877749,877765..877773))
/gene="infA"
/locus_tag="SF0843"
/note="rRNA binding site [nucleotide binding]; other site"
/db_xref="CDD:239898"
misc_feature complement(order(877606..877608,877699..877701,
877711..877713))
/gene="infA"
/locus_tag="SF0843"
/note="predicted 30S ribosome binding site [active]"
/db_xref="CDD:239898"
gene complement(878100..878804)
/gene="aat"
/locus_tag="SF0844"
/db_xref="GeneID:1023814"
CDS complement(878100..878804)
/gene="aat"
/locus_tag="SF0844"
/note="Code: O; COG: COG2360"
/codon_start=1
/transl_table=11
/product="leucyl/phenylalanyl-tRNA--protein transferase"
/protein_id="NP_706770.1"
/db_xref="GeneID:1023814"
/translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC
ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
LPNNFWVPRCLFSPQE"
misc_feature complement(878124..878768)
/gene="aat"
/locus_tag="SF0844"
/note="Leu/Phe-tRNA-protein transferase [Posttranslational
modification, protein turnover, chaperones]; Region: Aat;
COG2360"
/db_xref="CDD:441927"
gene complement(878846..880567)
/gene="cydC"
/locus_tag="SF0845"
/db_xref="GeneID:1023812"
CDS complement(878846..880567)
/gene="cydC"
/locus_tag="SF0845"
/note="Code: Q; COG: COG1132"
/codon_start=1
/transl_table=11
/product="cysteine/glutathione ABC transporter
membrane/ATP-binding protein"
/protein_id="NP_706771.1"
/db_xref="GeneID:1023812"
/translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDF
TLAFTLGSVMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP
GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVA
DRVSLTLRDVQFTYPKQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEIL
RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARTLLHDAPLVLLDEPTEGLDAT
TESQILELLAKMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
YQFKQGL"
misc_feature complement(878849..880567)
/gene="cydC"
/locus_tag="SF0845"
/note="cysteine/glutathione ABC transporter
membrane/ATP-binding component; Reviewed; Region:
PRK11160"
/db_xref="CDD:236865"
gene complement(880568..882334)
/gene="cydD"
/locus_tag="SF0846"
/db_xref="GeneID:1023802"
CDS complement(880568..882334)
/gene="cydD"
/locus_tag="SF0846"
/note="Code: Q; COG: COG1132"
/codon_start=1
/transl_table=11
/product="cysteine/glutathione ABC transporter
membrane/ATP-binding protein"
/protein_id="NP_706772.1"
/db_xref="GeneID:1023802"
/translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
PQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAAKLRDNVLLARPDA
SEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL
LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
YAELSVAGGPFATLLAHRQEEI"
misc_feature complement(880571..882334)
/gene="cydD"
/locus_tag="SF0846"
/note="cysteine/glutathione ABC transporter
membrane/ATP-binding component; Reviewed; Region:
PRK11174"
/db_xref="CDD:236870"
gene complement(882457..883422)
/gene="trxB"
/locus_tag="SF0847"
/db_xref="GeneID:1023830"
CDS complement(882457..883422)
/gene="trxB"
/locus_tag="SF0847"
/note="Code: O; COG: COG0492"
/codon_start=1
/transl_table=11
/product="thioredoxin reductase"
/protein_id="NP_706773.2"
/db_xref="GeneID:1023830"
/translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
TTTTEVENWPGDPNDLTGPLLMARMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
misc_feature complement(882463..883422)
/gene="trxB"
/locus_tag="SF0847"
/note="thioredoxin reductase; Provisional; Region:
PRK10262"
/db_xref="CDD:182343"
gene 883966..884460
/gene="lrp"
/locus_tag="SF0848"
/db_xref="GeneID:1023815"
CDS 883966..884460
/gene="lrp"
/locus_tag="SF0848"
/note="Code: K; COG: COG1522"
/codon_start=1
/transl_table=11
/product="leucine-responsive transcriptional regulator"
/protein_id="NP_706774.2"
/db_xref="GeneID:1023815"
/translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
IKTR"
misc_feature 883966..884457
/gene="lrp"
/locus_tag="SF0848"
/note="leucine-responsive transcriptional regulator Lrp;
Region: PRK11169"
/db_xref="CDD:183009"
gene 884595..888623
/gene="ftsK"
/locus_tag="SF0849"
/db_xref="GeneID:1023821"
CDS 884595..888623
/gene="ftsK"
/locus_tag="SF0849"
/note="Code: D; COG: COG1674"
/codon_start=1
/transl_table=11
/product="DNA translocase FtsK"
/protein_id="NP_706775.1"
/db_xref="GeneID:1023821"
/translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE
DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDE
EITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNSAPITEPVAVAAAATTATQSWA
APVEPVTQTPPVASVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQ
YNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQ
TEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRARERE
QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAA
TVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKA
REAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAA
EAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQ
QPQQPVAPQQQYQQPQQPVAPQQQYQQPQQQVAPQPQYQQPQQPVAPQQQYQQPQQPV
APQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSL
DLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGV
KAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRD
NPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDV
RFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNL
AGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKK
VEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILD
QAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSD
SESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEA
QGIVSEQGHNGNREVLAPPPFD"
misc_feature 884595..888620
/gene="ftsK"
/locus_tag="SF0849"
/note="DNA translocase FtsK; Provisional; Region:
PRK10263"
/db_xref="CDD:236669"
gene 888775..889389
/gene="lolA"
/locus_tag="SF0850"
/db_xref="GeneID:1027554"
CDS 888775..889389
/gene="lolA"
/locus_tag="SF0850"
/note="Code: M; COG: COG2834"
/codon_start=1
/transl_table=11
/product="lipoprotein chaperone"
/protein_id="NP_706776.1"
/db_xref="GeneID:1027554"
/translation="MMKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQ
KVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATW
LKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIH
QFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
misc_feature 888778..889386
/gene="lolA"
/locus_tag="SF0850"
/note="periplasmic chaperone LolA; Region: lolA;
TIGR00547"
/db_xref="CDD:129638"
misc_feature order(888892..888894,888898..888900,888904..888906,
888910..888912,888943..888945,888949..888951,
888955..888957,888985..888987,888991..888993,
889009..889011,889015..889017,889042..889044,
889048..889050,889183..889185,889219..889221,
889225..889227,889249..889251,889258..889260,
889264..889266,889288..889290,889294..889296,
889300..889302)
/gene="lolA"
/locus_tag="SF0850"
/note="hydrophobic core; other site"
/db_xref="CDD:319983"
gene 889400..890743
/gene="ycaJ"
/locus_tag="SF0851"
/db_xref="GeneID:1023810"
CDS 889400..890743
/gene="ycaJ"
/locus_tag="SF0851"
/note="Code: L; COG: COG2256"
/codon_start=1
/transl_table=11
/product="recombination factor protein RarA"
/protein_id="NP_706777.1"
/db_xref="GeneID:1023810"
/translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDDTRRAIAELVNGDARRALNTLEMM
ADMAEVYDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
HDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
misc_feature 889400..890725
/gene="ycaJ"
/locus_tag="SF0851"
/note="Replication-associated recombination protein RarA
(DNA-dependent ATPase) [Replication, recombination and
repair]; Region: RarA; COG2256"
/db_xref="CDD:441857"
gene 890834..892126
/gene="serS"
/locus_tag="SF0852"
/db_xref="GeneID:1023819"
CDS 890834..892126
/gene="serS"
/locus_tag="SF0852"
/note="Code: J; COG: COG0172"
/codon_start=1
/transl_table=11
/product="seryl-tRNA synthetase"
/protein_id="NP_706778.1"
/db_xref="GeneID:1023819"
/translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT
IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
misc_feature 890834..892123
/gene="serS"
/locus_tag="SF0852"
/note="seryl-tRNA synthetase; Provisional; Region:
PRK05431"
/db_xref="CDD:235461"
gene 892692..894809
/gene="dmsA"
/locus_tag="SF0853"
/db_xref="GeneID:1023811"
gene 894820..895437
/gene="dmsB"
/locus_tag="SF0854"
/db_xref="GeneID:1023813"
CDS 894820..895437
/gene="dmsB"
/locus_tag="SF0854"
/note="Code: C; COG: COG0437"
/codon_start=1
/transl_table=11
/product="anaerobic dimethyl sulfoxide reductase subunit
B"
/protein_id="NP_706780.1"
/db_xref="GeneID:1023813"
/translation="MTTQYGFFIDSSRCAGCKTCELACKDYKDLTPEVSFRRIYEYAG
GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
RYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
KHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
misc_feature 894829..895308
/gene="dmsB"
/locus_tag="SF0854"
/note="DMSO reductase, iron-sulfur subunit; Region:
DMSO_dmsB; TIGR02951"
/db_xref="CDD:131996"
gene 895439..896230
/gene="dmsC"
/locus_tag="SF0855"
/db_xref="GeneID:1023807"
CDS 895439..896230
/gene="dmsC"
/locus_tag="SF0855"
/note="Code: R; COG: COG3302"
/codon_start=1
/transl_table=11
/product="anaerobic dimethyl sulfoxide reductase subunit
C"
/protein_id="NP_706781.2"
/db_xref="GeneID:1023807"
/translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV
IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
LLAMLKKLSPALRTLWLVVTMVLGVVFVWMMVRVYNSIDTVPTWYSIWTPMGWAMRLL
PAISVLALVVSGVMSVMQGTELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCLWI
APQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS"
misc_feature 895439..896197
/gene="dmsC"
/locus_tag="SF0855"
/note="DMSO reductase anchor subunit (DmsC); Region: DmsC;
pfam04976"
/db_xref="CDD:398575"
gene complement(896266..896892)
/gene="ycaC"
/locus_tag="SF0856"
/db_xref="GeneID:1023806"
CDS complement(896266..896892)
/gene="ycaC"
/locus_tag="SF0856"
/note="Code: Q; COG: COG1335"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706782.1"
/db_xref="GeneID:1023806"
/translation="MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALG
DLAKYFNLPTILTTSFETGPNGPLVLELKAQFPDAPYIARPGNINAWDNEDFVKAVKA
TGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGA
QLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK"
misc_feature complement(896281..896883)
/gene="ycaC"
/locus_tag="SF0856"
/note="isochorismate family cysteine hydrolase YcaC;
Region: C_hydro_YcaC; NF041461"
/db_xref="CDD:469349"
gene 897207..898355
/gene="ycaD"
/locus_tag="SF0857"
/db_xref="GeneID:1023857"
CDS 897207..898355
/gene="ycaD"
/locus_tag="SF0857"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="MFS family transporter protein"
/protein_id="NP_706783.1"
/db_xref="GeneID:1023857"
/translation="MSTYTRPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVG
VVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLSSFIFAAGCAGLGLMIGFWSWLAWRF
VAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSV
LPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITAMLKLRQARLGVNGCIISGIVLGS
LYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVI
LGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS
LLGPSFSAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV"
misc_feature 897207..898349
/gene="ycaD"
/locus_tag="SF0857"
/note="putative MFS family transporter protein;
Provisional; Region: PRK03633"
/db_xref="CDD:179614"
mobile_element complement(898586..901339)
/mobile_element_type="insertion sequence:ISSfl4"
gene 898668..899342
/locus_tag="SF0858"
/db_xref="GeneID:1023808"
CDS 898668..899342
/locus_tag="SF0858"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 transposase"
/protein_id="NP_706784.1"
/db_xref="GeneID:1023808"
/translation="MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTI
HTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSRE
FKVRLAKQALQPGAVVARIAREHDINNNLLFKWKSQYEDGLLSDDDIQECMPVPVALT
DTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPELLRALIRE
MKGGIR"
misc_feature 898701..899285
/locus_tag="SF0858"
/note="IS66-like element accessory protein TnpA; Region:
IS66_access_TnpA; NF038385"
/db_xref="CDD:439678"
gene 899339..899686
/locus_tag="SF0859"
/db_xref="GeneID:1023816"
CDS 899339..899686
/locus_tag="SF0859"
/note="Code: L; COG: COG3436"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 ORF2"
/protein_id="NP_706785.1"
/db_xref="GeneID:1023816"
/translation="MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIF
VFRGRSGKMVKILWADRDGLCLFTKRLKRGRFVWPVTREGKVHLTPAQLSMLLEGIAW
QHPKRTERPGIRI"
misc_feature 899366..899635
/locus_tag="SF0859"
/note="IS66 family insertion sequence element accessory
protein TnpB; Region: IS66_TnpB; NF033819"
/db_xref="CDD:411392"
gene 899706..901307
/locus_tag="SF0860"
/db_xref="GeneID:1023805"
CDS 899706..901307
/locus_tag="SF0860"
/note="Code: L; COG: COG3436"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 transposase"
/protein_id="NP_706786.1"
/db_xref="GeneID:1023805"
/translation="MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQL
DRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENRLNTARNLLEDASSVTDSPDTSP
PSENPIASKPESPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQL
DIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIP
LYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVL
APGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADA
YAGYNVLYETGRVKEAGCLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGS
PAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDG
WVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLRE
VIEKLNDWPSNQVHELLPWNFSSVK"
misc_feature 899820..900101
/locus_tag="SF0860"
/note="Transposase C of IS166 homeodomain; Region:
LZ_Tnp_IS66; pfam13007"
/db_xref="CDD:463771"
misc_feature 900048..901244
/locus_tag="SF0860"
/note="IS66 family transposase; Region: transpos_IS66;
NF033517"
/db_xref="CDD:468053"
mobile_element 901339..901619
/note="partial"
/mobile_element_type="insertion sequence:IS2"
mobile_element complement(901839..903087)
/mobile_element_type="insertion sequence:IS911"
gene complement(901847..902686)
/locus_tag="SF0862"
/db_xref="GeneID:1023825"
CDS complement(901847..902686)
/locus_tag="SF0862"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_706788.1"
/db_xref="GeneID:1023825"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(901856..902665)
/locus_tag="SF0862"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(902713..903051)
/locus_tag="SF0863"
/db_xref="GeneID:1023842"
CDS complement(902713..903051)
/locus_tag="SF0863"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_706789.1"
/db_xref="GeneID:1023842"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(902743..903012)
/locus_tag="SF0863"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(903199..903489)
/locus_tag="SF0864"
/db_xref="GeneID:1023796"
CDS complement(903199..903489)
/locus_tag="SF0864"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706790.1"
/db_xref="GeneID:1023796"
/translation="MVDLLKAARGQMCTVRIPGYCNHDPETSVLAHYRLAGTCGTAIK
PHDMQAAIACSSCHDLIDGRVKTSDYTKEELRLMHAEGVFRTQEIWRKEGYL"
misc_feature complement(903208..903486)
/locus_tag="SF0864"
/note="Putative nuclease YbcO; Region: YbcO; pfam07102"
/db_xref="CDD:429293"
mobile_element 903723..904985
/mobile_element_type="insertion sequence:IS600"
gene 903787..904089
/locus_tag="SF0865"
/db_xref="GeneID:1023803"
CDS 903787..904089
/locus_tag="SF0865"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706791.1"
/db_xref="GeneID:1023803"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 903787..904059
/locus_tag="SF0865"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 904125..904943
/locus_tag="SF0866"
/db_xref="GeneID:1023836"
CDS 904125..904943
/locus_tag="SF0866"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706792.1"
/db_xref="GeneID:1023836"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELADNGIIVGRDRLARLRKELRLHCKQKRKFRATTSSDHNLPGTPNLLNQ
NFTPTAPNQVWVADLTYVATREGWLYLAGVKHVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature <904125..904916
/locus_tag="SF0866"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(904983..905354)
/locus_tag="SF0867"
/db_xref="GeneID:1027558"
CDS complement(904983..905354)
/locus_tag="SF0867"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706793.2"
/db_xref="GeneID:1027558"
/translation="MAHIQLVKQTSSGLLLPATPESCDFLHQIKIGEWIHADFKRVRN
YAFHKRFFKLLQLGFDYWTPVGGAITPRERKLVSGFVDYLCESVGREHTPALSEAAEQ
YLNTVATRRTRDTALLKSFEA"
misc_feature complement(<904986..905342)
/locus_tag="SF0867"
/note="Protein of unknown function (DUF1367); Region:
DUF1367; pfam07105"
/db_xref="CDD:429295"
gene complement(905393..905680)
/locus_tag="SF0868"
/db_xref="GeneID:1023855"
CDS complement(905393..905680)
/locus_tag="SF0868"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706794.1"
/db_xref="GeneID:1023855"
/translation="MKIEELREIFSENGLYAVRVENGAIVSHCRIRCLQSQQRKSGAV
LFYFCNGLLTDGFILREDEFVTSLRVLKKIGFKAGFLLLLKNKLIYNLEQD"
gene complement(905930..906142)
/locus_tag="SF0868a"
/db_xref="GeneID:16608310"
CDS complement(905930..906142)
/locus_tag="SF0868a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439234.1"
/db_xref="GeneID:16608310"
/translation="MLCTCRLASYMPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
RKDLCEVRIRTGQTEVAVFVDYESRK"
misc_feature complement(905945..906067)
/locus_tag="SF0868a"
/note="Hok/gef family; Region: HOK_GEF; pfam01848"
/db_xref="CDD:426473"
gene complement(906313..906879)
/locus_tag="SF0869"
/db_xref="GeneID:1023850"
CDS complement(906313..906879)
/locus_tag="SF0869"
/note="Code: S; COG: COG1636"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706795.1"
/db_xref="GeneID:1023850"
/translation="MEALQASEIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPF
IDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISR
WKNMQQVNDCGRRAVAHYPGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSL
RDTNLHRKSQGRPLIKIGQLHYGKEEKE"
misc_feature complement(906361..906879)
/locus_tag="SF0869"
/note="Epoxyqueuosine reductase QueH (tRNA modification)
[Translation, ribosomal structure and biogenesis]; Region:
QueH; COG1636"
/db_xref="CDD:441243"
gene complement(907147..907560)
/locus_tag="SF0870a"
/db_xref="GeneID:16608311"
CDS complement(907147..907560)
/locus_tag="SF0870a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439235.1"
/db_xref="GeneID:16608311"
/translation="MKLAIRLQLPLAFASKERSMEIKPEDELSNIVLFPIKEDDPRNQ
VNFLYKPSERPYCHHASVRVDEKERQVRCKICGAVVEPFDWMLSVAKRETRLADDVRL
LRQEEQERRRNIEKLIQIERNAKARIRRATKSRTE"
gene complement(907561..907983)
/locus_tag="SF0871"
/db_xref="GeneID:1026184"
CDS complement(907561..907983)
/locus_tag="SF0871"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706797.1"
/db_xref="GeneID:1026184"
/translation="MAKPFTPEQREELKTRIVELVHQDGRVTIRQLSDETGISRASVG
RLCIELVASGDVYNSGYGLFPSEQARKDWQSARKKLSRVKVRKPVVVDPDLIWSLPDG
EIRRYDRRLNIICRECRKSEAMQRVLAFYQGNFQEAIL"
misc_feature complement(907576..907983)
/locus_tag="SF0871"
/note="Bacterial protein of unknown function (DUF977);
Region: DUF977; pfam06163"
/db_xref="CDD:310626"
gene complement(907998..908744)
/locus_tag="SF0872"
/pseudo
/db_xref="GeneID:1023838"
misc_feature complement(907998..908744)
/locus_tag="SF0872"
/note="Similar to Escherichia coli K12 DNA replication
factor ref: NP_415878.1 (248 aa). BLAST with identity of
92% in 248 aa. This CDS contains an in-frame stop codon.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(908890..909522)
/locus_tag="SF0873"
/db_xref="GeneID:1023845"
CDS complement(908890..909522)
/locus_tag="SF0873"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706798.1"
/db_xref="GeneID:1023845"
/translation="MASNWIKLEVITPDKPEIFRLAEILNIDPDAALGKVIRFWAWAD
QQMIDGNADCNARGVTKSAIDRITFMSGFADALIQVGWLVENDGGLSLPNFERHNGKS
SKKRAVTNERVTKIRELKRKGNAASVTQTDQKALPVEEEDLNTDLPLNPPRQKRASKK
FEPEAIELPDWLPETLWHEWVRFRQALRKPIRTEQGDTGTGKIPSAGFYT"
gene complement(909600..910022)
/locus_tag="SF0874"
/db_xref="GeneID:1023834"
CDS complement(909600..910022)
/locus_tag="SF0874"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706799.1"
/db_xref="GeneID:1023834"
/translation="MKIRHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELSLVP
GKDWNNQQNIYHRWLKGETKAQREKIQKLIPAVLAILPRELRHRLCIFDTLERRALLA
AQEALSTAIDAHDDAVQAVYRKAHFSGGGSPGDSVVVH"
misc_feature complement(<909684..909878)
/locus_tag="SF0874"
/note="Putative bacterial toxin ydaT; Region: YdaT_toxin;
pfam06254"
/db_xref="CDD:368819"
gene complement(910006..910233)
/locus_tag="SF0875"
/db_xref="GeneID:1023827"
CDS complement(910006..910233)
/locus_tag="SF0875"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator DicC"
/protein_id="NP_706800.1"
/db_xref="GeneID:1023827"
/translation="MLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQE
ASGGELQYDPKVYDEYRKAKRPGKVIHENQA"
misc_feature complement(910009..910233)
/locus_tag="SF0875"
/note="DNA-binding transcriptional regulator DicC;
Provisional; Region: PRK09744"
/db_xref="CDD:137503"
gene 910310..910717
/locus_tag="SF0876"
/db_xref="GeneID:1023847"
CDS 910310..910717
/locus_tag="SF0876"
/note="Code: K; COG: COG1396"
/codon_start=1
/transl_table=11
/product="transcriptional repressor DicA"
/protein_id="NP_706801.1"
/db_xref="GeneID:1023847"
/translation="MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQ
PAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALPES
EQKALLSEMRARVENFNKLFEELLKARKRSANK"
misc_feature 910310..910714
/locus_tag="SF0876"
/note="transcriptional repressor DicA; Reviewed; Region:
PRK09706"
/db_xref="CDD:182039"
gene 910920..911075
/locus_tag="SF0877"
/db_xref="GeneID:1023849"
CDS 910920..911075
/locus_tag="SF0877"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706802.2"
/db_xref="GeneID:1023849"
/translation="MNTIDLGNNESPVYGVFPNQDGTFTAITYTKSKTFKTEAGARRW
LGRHSGE"
misc_feature 910920..911063
/locus_tag="SF0877"
/note="Protein of unknown function (DUF1391); Region:
DUF1391; pfam07151"
/db_xref="CDD:462102"
mobile_element complement(911511..912841)
/mobile_element_type="insertion sequence:IS2"
gene complement(911522..912427)
/locus_tag="SF0878"
/db_xref="GeneID:1023833"
CDS complement(911522..912427)
/locus_tag="SF0878"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_706803.1"
/db_xref="GeneID:1023833"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(911525..912427)
/locus_tag="SF0878"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(912385..912795)
/locus_tag="SF0879"
/db_xref="GeneID:1023841"
CDS complement(912385..912795)
/locus_tag="SF0879"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706804.3"
/db_xref="GeneID:1023841"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(912388..912750)
/locus_tag="SF0879"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 913190..914146
/locus_tag="SF0880"
/db_xref="GeneID:1023843"
CDS 913190..914146
/locus_tag="SF0880"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706805.1"
/db_xref="GeneID:1023843"
/translation="MVWVGKPTVIVNWLTSPGGTRHRINKVHFGDERKEKMLNVAIEN
QNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLCVKHSHIQIMVGRAGQPQGWPVS
VVTGCSNPVRLTTHEIATSGGESFKLTIEAAIMATILTLSHPDATIENGRAVTTSVAV
AEFFRKMHKNVIQKIETLECSPEFNRLNFKPVTYTDAKGEKRPMYQITKNGFVFLVMG
FTGKKAAAFKEAYIAEFDRMEAELRQNNTPPADKMIPGDGRTLVVHFDKFGNVEFTET
VPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQLLSLK"
misc_feature 913349..913621
/locus_tag="SF0880"
/note="Ash protein family; Region: Phage_ASH; pfam10554"
/db_xref="CDD:431354"
misc_feature 913628..>913942
/locus_tag="SF0880"
/note="Phage regulatory protein Rha [Mobilome: prophages,
transposons]; Region: pRha; COG3646"
/db_xref="CDD:442863"
mobile_element 914596..915859
/mobile_element_type="insertion sequence:IS600"
gene 914660..914962
/locus_tag="SF0881"
/db_xref="GeneID:1023864"
CDS 914660..914962
/locus_tag="SF0881"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706806.1"
/db_xref="GeneID:1023864"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 914660..914932
/locus_tag="SF0881"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 914998..915816
/locus_tag="SF0882"
/db_xref="GeneID:1023826"
CDS 914998..915816
/locus_tag="SF0882"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706807.1"
/db_xref="GeneID:1023826"
/translation="MCQVFGVSRSGYCNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQIAA"
misc_feature <914998..915789
/locus_tag="SF0882"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(915841..916485)
/locus_tag="SF0883"
/db_xref="GeneID:1023837"
CDS complement(915841..916485)
/locus_tag="SF0883"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease VIII"
/protein_id="NP_706808.1"
/db_xref="GeneID:1023837"
/translation="MSTKPLFLLRKAKKSSGEPDVVLWASDDFESTSTTLDYLLVKSG
KKLSNYFKAVATNFPVVNDLPPEGEIDFTWSERYQLSKDSMTWELKPGAAPDDVHHQD
NAQETKELAGGQEENAQADAHEDCQDCEVSVATLRFTQRLLHIFTYAAGDLKYLHHAT
REQRKHITALEMDQENSYVQNLLLAIRGMAEPTTLDNAALLRLTDAIKAEVYWQ"
misc_feature complement(915940..916482)
/locus_tag="SF0883"
/note="Enterobacterial exodeoxyribonuclease VIII; Region:
Exonuc_VIII; pfam06630"
/db_xref="CDD:284130"
mobile_element complement(916786..918049)
/mobile_element_type="insertion sequence:IS600"
gene complement(916829..917647)
/locus_tag="SF0884"
/db_xref="GeneID:1023832"
CDS complement(916829..917647)
/locus_tag="SF0884"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706809.1"
/db_xref="GeneID:1023832"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKPEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLQTSMSRKGNCYDNAPMESLWGTL
KNESLSHYRFNNRDEAILVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature complement(916856..>917647)
/locus_tag="SF0884"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(917683..917985)
/locus_tag="SF0885"
/db_xref="GeneID:1023871"
CDS complement(917683..917985)
/locus_tag="SF0885"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706810.1"
/db_xref="GeneID:1023871"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(917713..917985)
/locus_tag="SF0885"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 918051..918668
/locus_tag="SF0886"
/db_xref="GeneID:1023835"
CDS 918051..918668
/locus_tag="SF0886"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706811.2"
/db_xref="GeneID:1023835"
/translation="MSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFDDR
DQAVPYTATADDVAPTGQRIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRT
EQEAKPFTFEWNGRIWNAGPNSLGRLYPVVMAAKSDIVRDVMTWGDADNQQVKLSMPE
LEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE"
misc_feature 918330..918653
/locus_tag="SF0886"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
gene complement(918848..920658)
/gene="ipaH_2"
/locus_tag="SF0887"
/pseudo
/db_xref="GeneID:1023823"
misc_feature complement(918848..920658)
/gene="ipaH_2"
/locus_tag="SF0887"
/note="Similar to Shigella flexneri IpaH9.8 gb: AAC23714.1
(545 aa). BLAST with identity of 64% in 604 aa. This CDS
has been disrupted by insertion. The sequence has been
checked and is believed to be correct."
/pseudo
gene 921555..922550
/gene="ybhE"
/locus_tag="SF0888"
/db_xref="GeneID:1027557"
CDS 921555..922550
/gene="ybhE"
/locus_tag="SF0888"
/note="Code: G; COG: COG2706"
/codon_start=1
/transl_table=11
/product="6-phosphogluconolactonase"
/protein_id="NP_706812.2"
/db_xref="GeneID:1027557"
/translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESVLPGSPTHISTDHQGQFVFVGSYN
AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
PRGFNVDYSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
misc_feature 921558..922547
/gene="ybhE"
/locus_tag="SF0888"
/note="6-phosphogluconolactonase; Provisional; Region:
PRK11028"
/db_xref="CDD:182912"
gene complement(922591..923607)
/gene="ybhD"
/locus_tag="SF0889"
/pseudo
/db_xref="GeneID:1026191"
misc_feature complement(922591..923607)
/gene="ybhD"
/locus_tag="SF0889"
/note="Similar to Escherichia coli K12 transcriptional
regulator LYSR-type gi: 1786984 (339 aa). BLAST with
identity of 97% in 338 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 923833..924780
/gene="ybhH"
/locus_tag="SF0890"
/db_xref="GeneID:1023868"
CDS 923833..924780
/gene="ybhH"
/locus_tag="SF0890"
/note="Code: S; COG: COG2828"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706813.2"
/db_xref="GeneID:1023868"
/translation="MAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQ
VIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTP
NGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMA
MPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVL
ISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIE
HPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP"
misc_feature 923833..924777
/gene="ybhH"
/locus_tag="SF0890"
/note="2-Methylaconitate cis-trans-isomerase PrpF
(2-methyl citrate pathway) [Energy production and
conversion]; Region: PrpF; cl42415"
/db_xref="CDD:478184"
gene 924919..926289
/gene="ybhI"
/locus_tag="SF0891"
/db_xref="GeneID:1023881"
CDS 924919..926289
/gene="ybhI"
/locus_tag="SF0891"
/note="Code: P; COG: COG0471"
/codon_start=1
/transl_table=11
/product="membrane pump protein"
/protein_id="NP_706814.2"
/db_xref="GeneID:1023881"
/translation="MPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASM
VVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKLIAYLLIGKIGNT
MLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMM
SIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLV
IYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDEST
VAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKN
NLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALAL
LFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNML
IGWNML"
misc_feature 924919..926277
/gene="ybhI"
/locus_tag="SF0891"
/note="Sodium:sulfate symporter transmembrane region;
Region: Na_sulph_symp; pfam00939"
/db_xref="CDD:279307"
misc_feature order(925030..925071,925114..925167,925240..925290,
925294..925302,925306..925350,925363..925365,
925387..925455,925537..925581,925675..925713,
925735..925779,925819..925875,925954..926001,
926083..926142,926203..926241)
/gene="ybhI"
/locus_tag="SF0891"
/note="transmembrane helices; other site"
/db_xref="CDD:238344"
gene 926472..928652
/gene="ybhJ"
/locus_tag="SF0892"
/db_xref="GeneID:1023872"
CDS 926472..928652
/gene="ybhJ"
/locus_tag="SF0892"
/note="Code: C; COG: COG1048"
/codon_start=1
/transl_table=11
/product="hydratase"
/protein_id="NP_706815.2"
/db_xref="GeneID:1023872"
/translation="MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSS
HNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGT
INGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVK
NKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQL
NPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAH
GKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPS
SQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREG
SKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQG
FVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRS
NPIGLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQR
VIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTT
FKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM"
misc_feature 926472..928643
/gene="ybhJ"
/locus_tag="SF0892"
/note="putative hydratase; Provisional; Region: PRK11413"
/db_xref="CDD:183125"
gene complement(928793..930076)
/gene="ybhC"
/locus_tag="SF0893"
/db_xref="GeneID:1023858"
CDS complement(928793..930076)
/gene="ybhC"
/locus_tag="SF0893"
/codon_start=1
/transl_table=11
/product="acyl-CoA thioesterase"
/protein_id="NP_706816.1"
/db_xref="GeneID:1023858"
/translation="MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPI
LSAKEALNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT
NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
ASGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD
DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEEKK"
misc_feature complement(928817..930076)
/gene="ybhC"
/locus_tag="SF0893"
/note="putative acyl-CoA thioester hydrolase; Region:
PRK10531"
/db_xref="CDD:236709"
mobile_element complement(931150..932413)
/mobile_element_type="insertion sequence:IS600"
gene complement(931193..932011)
/locus_tag="SF0895"
/db_xref="GeneID:1023877"
CDS complement(931193..932011)
/locus_tag="SF0895"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706818.1"
/db_xref="GeneID:1023877"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature complement(931220..>932011)
/locus_tag="SF0895"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(932047..932349)
/locus_tag="SF0896"
/db_xref="GeneID:1023828"
CDS complement(932047..932349)
/locus_tag="SF0896"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706819.1"
/db_xref="GeneID:1023828"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(932077..932349)
/locus_tag="SF0896"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element complement(932413..932594)
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene complement(932758..933498)
/gene="pflA"
/locus_tag="SF0897"
/db_xref="GeneID:1023839"
CDS complement(932758..933498)
/gene="pflA"
/locus_tag="SF0897"
/note="Code: O; COG: COG1180"
/codon_start=1
/transl_table=11
/product="pyruvate formate lyase-activating enzyme 1"
/protein_id="NP_706820.2"
/db_xref="GeneID:1023839"
/translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
LDGVKPPKKETMERVKGILEQYGHKVMF"
misc_feature complement(932761..933498)
/gene="pflA"
/locus_tag="SF0897"
/note="pyruvate formate lyase 1-activating protein;
Region: pflA; PRK11145"
/db_xref="CDD:182994"
gene complement(933690..935972)
/gene="pflB"
/locus_tag="SF0898"
/db_xref="GeneID:1023824"
CDS complement(933690..935972)
/gene="pflB"
/locus_tag="SF0898"
/note="Code: C; COG: COG1882"
/codon_start=1
/transl_table=11
/product="formate acetyltransferase 1"
/protein_id="NP_706821.1"
/db_xref="GeneID:1023824"
/translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKALEKVVGLQT
EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKYAQFTSLQADLENGVNLEQTI
RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
VDEKLKMQVGPKSEPIKGDLLSYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
NSLTKEQQQDVITRTFTQSM"
misc_feature complement(933705..935942)
/gene="pflB"
/locus_tag="SF0898"
/note="Pyruvate formate lyase 1; Region: PFL1; cd01678"
/db_xref="CDD:153087"
misc_feature complement(order(935487..935492,935499..935501,
935514..935516,935520..935525,935532..935537,
935619..935624))
/gene="pflB"
/locus_tag="SF0898"
/note="coenzyme A binding site [chemical binding]; other
site"
/db_xref="CDD:153087"
misc_feature complement(order(934152..934154,934158..934160,
934665..934667,934674..934676,934716..934718,
934971..934973,934989..934991,935151..935156,
935442..935444))
/gene="pflB"
/locus_tag="SF0898"
/note="active site"
/db_xref="CDD:153087"
misc_feature complement(order(933768..933770,934713..934718))
/gene="pflB"
/locus_tag="SF0898"
/note="catalytic residues [active]"
/db_xref="CDD:153087"
misc_feature complement(933765..933779)
/gene="pflB"
/locus_tag="SF0898"
/note="glycine loop [active]"
/db_xref="CDD:153087"
gene complement(936027..936884)
/gene="focA"
/locus_tag="SF0899"
/db_xref="GeneID:1023861"
CDS complement(936027..936884)
/gene="focA"
/locus_tag="SF0899"
/note="Code: P; COG: COG2116"
/codon_start=1
/transl_table=11
/product="formate transporter"
/protein_id="NP_706822.2"
/db_xref="GeneID:1023861"
/translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
GRITWCQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT
FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
IYLRENDHH"
misc_feature complement(936030..936884)
/gene="focA"
/locus_tag="SF0899"
/note="formate transporter; Provisional; Region: PRK10805"
/db_xref="CDD:182746"
gene complement(937290..939050)
/gene="ycaO"
/locus_tag="SF0900"
/db_xref="GeneID:1023880"
CDS complement(937290..939050)
/gene="ycaO"
/locus_tag="SF0900"
/note="Code: S; COG: COG1944"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706823.2"
/db_xref="GeneID:1023880"
/translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW
SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
YPNEKWFPLSENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
IPADVLARYPAVVEAIETLETEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD
IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH
QSLLKAYEKLQRAKAAFWAK"
misc_feature complement(937317..939041)
/gene="ycaO"
/locus_tag="SF0900"
/note="30S ribosomal protein S12 methylthiotransferase
accessory factor YcaO; Region: YcaO_for_S12; NF040716"
/db_xref="CDD:468680"
gene 939180..939806
/locus_tag="SF0901"
/pseudogene="unknown"
/db_xref="GeneID:1026193"
gene 940005..941093
/gene="serC"
/locus_tag="SF0902"
/db_xref="GeneID:1023863"
CDS 940005..941093
/gene="serC"
/locus_tag="SF0902"
/note="Code: HE; COG: COG1932"
/codon_start=1
/transl_table=11
/product="3-phosphoserine/phosphohydroxythreonine
aminotransferase"
/protein_id="NP_706825.1"
/db_xref="GeneID:1023863"
/translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
NIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
RASIYNAMPLEGVKALTDFMVEFERRHG"
misc_feature 940005..941090
/gene="serC"
/locus_tag="SF0902"
/note="3-phosphoserine/phosphohydroxythreonine
transaminase; Region: PRK05355"
/db_xref="CDD:235428"
misc_feature order(940020..940022,940035..940040,940044..940046,
940221..940226,940233..940235,940329..940331,
940338..940343,940611..940613,940719..940727)
/gene="serC"
/locus_tag="SF0902"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99736"
misc_feature order(940029..940031,940230..940235,940308..940310,
940461..940463,940524..940526,940593..940598,
940986..940988)
/gene="serC"
/locus_tag="SF0902"
/note="substrate-cofactor binding pocket [active]"
/db_xref="CDD:99736"
misc_feature order(940227..940235,940308..940310,940461..940463,
940524..940526,940530..940532,940593..940598)
/gene="serC"
/locus_tag="SF0902"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99736"
misc_feature 940596..940598
/gene="serC"
/locus_tag="SF0902"
/note="catalytic residue [active]"
/db_xref="CDD:99736"
gene 941164..942447
/gene="aroA"
/locus_tag="SF0903"
/db_xref="GeneID:1023875"
CDS 941164..942447
/gene="aroA"
/locus_tag="SF0903"
/note="Code: E; COG: COG0128"
/codon_start=1
/transl_table=11
/product="3-phosphoshikimate 1-carboxyvinyltransferase"
/protein_id="NP_706826.1"
/db_xref="GeneID:1023875"
/translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
LDSDDVRHMLNALTALGLSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
AAALCLDSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
misc_feature 941197..942432
/gene="aroA"
/locus_tag="SF0903"
/note="Enol pyruvate transferases family includes EPSP
synthases and UDP-N-acetylglucosamine enolpyruvyl
transferase. Both enzymes catalyze the reaction of
enolpyruvyl transfer; Region: EPT-like; cd01554"
/db_xref="CDD:238795"
misc_feature order(941215..941226,941878..941889)
/gene="aroA"
/locus_tag="SF0903"
/note="hinge; other site"
/db_xref="CDD:238795"
misc_feature order(941227..941232,941242..941244,941452..941454,
941533..941535,941671..941676,941761..941763,
942100..942102,942319..942321,942394..942396)
/gene="aroA"
/locus_tag="SF0903"
/note="active site"
/db_xref="CDD:238795"
mobile_element 942506..943933
/mobile_element_type="insertion sequence:IS4"
gene 942573..943919
/locus_tag="SF0904"
/db_xref="GeneID:1023867"
CDS 942573..943919
/locus_tag="SF0904"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_706827.1"
/db_xref="GeneID:1023867"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLAPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMVLERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRMFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIGQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSNRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMSDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature 942663..943661
/locus_tag="SF0904"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene 944055..944819
/gene="ycaL"
/locus_tag="SF0905"
/db_xref="GeneID:1023898"
CDS 944055..944819
/gene="ycaL"
/locus_tag="SF0905"
/note="Code: O; COG: COG0501"
/codon_start=1
/transl_table=11
/product="heat shock protein"
/protein_id="NP_706828.2"
/db_xref="GeneID:1023898"
/translation="MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATL
SDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSD
VNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDA
ISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSF
EKLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK"
misc_feature 944154..944801
/gene="ycaL"
/locus_tag="SF0905"
/note="Peptidase M48C Ste24p loiP-like, integral membrane
protein; Region: M48C_loiP_like; cd07334"
/db_xref="CDD:320693"
misc_feature order(944454..944459,944466..944468,944631..944633,
944643..944645,944760..944762)
/gene="ycaL"
/locus_tag="SF0905"
/note="putative active site [active]"
/db_xref="CDD:320693"
misc_feature order(944454..944456,944466..944468,944631..944633,
944760..944762)
/gene="ycaL"
/locus_tag="SF0905"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:320693"
gene 944992..945675
/gene="cmk"
/locus_tag="SF0906"
/db_xref="GeneID:1023896"
CDS 944992..945675
/gene="cmk"
/locus_tag="SF0906"
/note="Code: F; COG: COG0283"
/codon_start=1
/transl_table=11
/product="cytidylate kinase"
/protein_id="NP_706829.1"
/db_xref="GeneID:1023896"
/translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
VAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQLIEKALQ
YARQKLALA"
misc_feature 945007..945666
/gene="cmk"
/locus_tag="SF0906"
/note="Cytidylate kinase [Nucleotide transport and
metabolism]; Region: Cmk; COG0283"
/db_xref="CDD:440052"
gene 945786..947459
/gene="rpsA"
/locus_tag="SF0907"
/db_xref="GeneID:1023876"
CDS 945786..947459
/gene="rpsA"
/locus_tag="SF0907"
/note="Code: J; COG: COG0539"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S1"
/protein_id="NP_706830.1"
/db_xref="GeneID:1023876"
/translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
misc_feature 945786..947456
/gene="rpsA"
/locus_tag="SF0907"
/note="30S ribosomal protein S1; Reviewed; Region: rpsA;
PRK06299"
/db_xref="CDD:235775"
gene 947619..947903
/gene="ihfB"
/locus_tag="SF0908"
/db_xref="GeneID:1023862"
CDS 947619..947903
/gene="ihfB"
/locus_tag="SF0908"
/note="Code: L; COG: COG0776"
/codon_start=1
/transl_table=11
/product="integration host factor subunit beta"
/protein_id="NP_706831.1"
/db_xref="GeneID:1023862"
/translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
misc_feature 947619..947900
/gene="ihfB"
/locus_tag="SF0908"
/note="integration host factor subunit beta; Reviewed;
Region: ihfB; PRK00199"
/db_xref="CDD:178925"
misc_feature order(947625..947627,947634..947636,947643..947648,
947655..947657,947667..947669,947679..947681,
947688..947696,947700..947729,947739..947756,
947760..947762,947841..947846,947850..947852,
947856..947858,947862..947864,947874..947876)
/gene="ihfB"
/locus_tag="SF0908"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:259858"
misc_feature order(947625..947630,947748..947756,947760..947762,
947778..947780,947784..947789,947853..947855,
947859..947861,947865..947870)
/gene="ihfB"
/locus_tag="SF0908"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:259858"
gene 948033..950369
/gene="ycaI"
/locus_tag="SF0909"
/pseudo
/db_xref="GeneID:1023848"
misc_feature 948033..950369
/gene="ycaI"
/locus_tag="SF0909"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787142 (781 aa). BLAST with
identity of 98% in 779 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 950406..952154
/gene="msbA"
/locus_tag="SF0910"
/db_xref="GeneID:1023860"
CDS 950406..952154
/gene="msbA"
/locus_tag="SF0910"
/note="Code: Q; COG: COG1132"
/codon_start=1
/transl_table=11
/product="lipid transporter ATP-binding/permease"
/protein_id="NP_706832.1"
/db_xref="GeneID:1023860"
/translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
DNLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
EHRGVYAQLHKMQFGQ"
misc_feature 950406..952151
/gene="msbA"
/locus_tag="SF0910"
/note="lipid A ABC transporter ATP-binding
protein/permease MsbA; Region: PRK11176"
/db_xref="CDD:183016"
gene 952151..953137
/gene="lpxK"
/locus_tag="SF0911"
/db_xref="GeneID:1023856"
CDS 952151..953137
/gene="lpxK"
/locus_tag="SF0911"
/note="Code: N; COG: COG1663"
/codon_start=1
/transl_table=11
/product="tetraacyldisaccharide 4'-kinase"
/protein_id="NP_706833.1"
/db_xref="GeneID:1023856"
/translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA
PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTT
TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE
IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
SAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTSLASGN"
misc_feature 952151..953119
/gene="lpxK"
/locus_tag="SF0911"
/note="tetraacyldisaccharide 4'-kinase; Reviewed; Region:
lpxK; PRK00652"
/db_xref="CDD:234808"
gene 953174..954406
/gene="ycaQ"
/locus_tag="SF0912"
/db_xref="GeneID:1023873"
CDS 953174..954406
/gene="ycaQ"
/locus_tag="SF0912"
/note="Code: S; COG: COG3214"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706834.1"
/db_xref="GeneID:1023873"
/translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL
QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
LVGRMDAKMHRQTGILEVISLWLQEGIKPTTMLQKGLRQAITDFASWQQATRVTLGRC
PQGLFTDCRTGWEIDPVA"
misc_feature 953174..954388
/gene="ycaQ"
/locus_tag="SF0912"
/note="DNA glycosylase YcaQ, repair of DNA interstrand
crosslinks [Replication, recombination and repair];
Region: YcaQ; COG3214"
/db_xref="CDD:442447"
gene 954458..954640
/gene="ycaR"
/locus_tag="SF0913"
/db_xref="GeneID:1023852"
CDS 954458..954640
/gene="ycaR"
/locus_tag="SF0913"
/note="Code: S; COG: COG2835"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706835.1"
/db_xref="GeneID:1023852"
/translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
LLETEARVLTADESKS"
misc_feature 954458..954637
/gene="ycaR"
/locus_tag="SF0913"
/note="protein YcaR; Region: PRK11827"
/db_xref="CDD:183328"
gene 954637..955383
/gene="kdsB"
/locus_tag="SF0914"
/db_xref="GeneID:1023904"
CDS 954637..955383
/gene="kdsB"
/locus_tag="SF0914"
/note="Code: M; COG: COG1212"
/codon_start=1
/transl_table=11
/product="3-deoxy-manno-octulosonate cytidylyltransferase"
/protein_id="NP_706836.1"
/db_xref="GeneID:1023904"
/translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER
IIVATDHDDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYG
EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
misc_feature 954637..955380
/gene="kdsB"
/locus_tag="SF0914"
/note="3-deoxy-manno-octulosonate cytidylyltransferase;
Provisional; Region: PRK05450"
/db_xref="CDD:235473"
misc_feature order(954658..954666,954778..954780,954859..954861,
954928..954930,954934..954936)
/gene="kdsB"
/locus_tag="SF0914"
/note="Ligand binding site [active]"
/db_xref="CDD:133010"
misc_feature order(955000..955002,955051..955053,955069..955077,
955093..955098,955102..955122,955165..955167,
955240..955245,955252..955260,955279..955290)
/gene="kdsB"
/locus_tag="SF0914"
/note="oligomer interface [active]"
/db_xref="CDD:133010"
gene 955537..956430
/locus_tag="SF0915"
/db_xref="GeneID:1023859"
CDS 955537..956430
/locus_tag="SF0915"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706837.1"
/db_xref="GeneID:1023859"
/translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN
QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV
GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
TGRFSRRNFDLASKSLLPWLA"
misc_feature 955537..956427
/locus_tag="SF0915"
/note="hypothetical protein; Provisional; Region:
PRK10593"
/db_xref="CDD:182575"
gene complement(956407..957186)
/gene="ycbC"
/locus_tag="SF0916"
/db_xref="GeneID:1023894"
CDS complement(956407..957186)
/gene="ycbC"
/locus_tag="SF0916"
/note="Code: S; COG: COG1434"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706838.2"
/db_xref="GeneID:1023894"
/translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFIS
IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGPSGEPRQE"
misc_feature complement(956410..957186)
/gene="ycbC"
/locus_tag="SF0916"
/note="envelope biogenesis factor ElyC; Region: PRK10494"
/db_xref="CDD:236702"
misc_feature complement(order(956611..956613,956620..956622,
956632..956634,956683..956685,956692..956694))
/gene="ycbC"
/locus_tag="SF0916"
/note="putative active site [active]"
/db_xref="CDD:99750"
gene 957322..958107
/gene="smtA"
/locus_tag="SF0917"
/db_xref="GeneID:1023854"
CDS 957322..958107
/gene="smtA"
/locus_tag="SF0917"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="S-adenosyl-L-methionine-dependent
methyltransferase"
/protein_id="NP_706839.2"
/db_xref="GeneID:1023854"
/translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ
KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA
QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
YQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
misc_feature 957322..958086
/gene="smtA"
/locus_tag="SF0917"
/note="tRNA uridine 5-oxyacetic acid(34) methyltransferase
CmoM; Region: PRK11036"
/db_xref="CDD:182918"
gene 958104..959426
/gene="mukF"
/locus_tag="SF0918"
/db_xref="GeneID:1023853"
CDS 958104..959426
/gene="mukF"
/locus_tag="SF0918"
/note="Code: D; COG: COG3006"
/codon_start=1
/transl_table=11
/product="condesin subunit F"
/protein_id="NP_706840.1"
/db_xref="GeneID:1023853"
/translation="MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD
GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
misc_feature 958104..959423
/gene="mukF"
/locus_tag="SF0918"
/note="Chromosome condensin MukBEF, kleisin-like MukF
subunit [Cell cycle control, cell division, chromosome
partitioning]; Region: MukF; COG3006"
/db_xref="CDD:442243"
gene 959434..960111
/gene="mukE"
/locus_tag="SF0919"
/db_xref="GeneID:1023907"
CDS 959434..960111
/gene="mukE"
/locus_tag="SF0919"
/note="Code: D; COG: COG3095"
/codon_start=1
/transl_table=11
/product="condesin subunit E"
/protein_id="NP_706841.2"
/db_xref="GeneID:1023907"
/translation="MPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEY
LEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLAN
EGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVW
FMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEESQ
PDSGEEE"
misc_feature 959434..960108
/gene="mukE"
/locus_tag="SF0919"
/note="Chromosome condensin MukBEF, MukE localization
factor [Cell cycle control, cell division, chromosome
partitioning]; Region: MukE; COG3095"
/db_xref="CDD:442329"
gene 960111..964571
/gene="mukB"
/locus_tag="SF0920"
/db_xref="GeneID:1023891"
CDS 960111..964571
/gene="mukB"
/locus_tag="SF0920"
/note="Code: D; COG: COG3096"
/codon_start=1
/transl_table=11
/product="cell division protein MukB"
/protein_id="NP_706842.1"
/db_xref="GeneID:1023891"
/translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
DHLNLVQTALRQQEKIERYEVDLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFSS
SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGD
PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS
ERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHE
NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
KKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE
MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIR
TDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGL
QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLLGRDEAPSQAS"
misc_feature 960114..964520
/gene="mukB"
/locus_tag="SF0920"
/note="Chromosome condensin MukBEF, ATPase and DNA-binding
subunit MukB [Cell cycle control, cell division,
chromosome partitioning]; Region: MukB; COG3096"
/db_xref="CDD:442330"
mobile_element 964649..966076
/mobile_element_type="insertion sequence:IS4"
gene 964716..966062
/locus_tag="SF0921"
/db_xref="GeneID:1023879"
CDS 964716..966062
/locus_tag="SF0921"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_706843.1"
/db_xref="GeneID:1023879"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature 964806..965804
/locus_tag="SF0921"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene 966270..968117
/gene="ycbB"
/locus_tag="SF0922"
/db_xref="GeneID:1027560"
CDS 966270..968117
/gene="ycbB"
/locus_tag="SF0922"
/note="Code: S; COG: COG2989"
/codon_start=1
/transl_table=11
/product="murein L,D-transpeptidase"
/protein_id="NP_706844.1"
/db_xref="GeneID:1027560"
/translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
LHFIANIPIKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
AMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD
DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLLYYQNG
NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
GYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
RQSIPVNLYYLTAFVGADDRTQYRTDIYNYDLPARSSSQIVSKAEQLIR"
misc_feature 966270..968114
/gene="ycbB"
/locus_tag="SF0922"
/note="murein L,D-transpeptidase; Provisional; Region:
PRK10594"
/db_xref="CDD:236723"
gene 968298..968846
/gene="ycbK"
/locus_tag="SF0923"
/db_xref="GeneID:1026200"
CDS 968298..968846
/gene="ycbK"
/locus_tag="SF0923"
/note="Code: S; COG: COG3108"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706845.2"
/db_xref="GeneID:1026200"
/translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR
KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
GGVGYYPRSNFVHIDTGPARHW"
misc_feature 968394..968843
/gene="ycbK"
/locus_tag="SF0923"
/note="Peptidase M15; Region: Peptidase_M15_3; cl42048"
/db_xref="CDD:455393"
gene 968873..969520
/gene="ycbL"
/locus_tag="SF0924"
/db_xref="GeneID:1023865"
CDS 968873..969520
/gene="ycbL"
/locus_tag="SF0924"
/note="Code: R; COG: COG0491"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706846.1"
/db_xref="GeneID:1023865"
/translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC
QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
misc_feature 968879..969448
/gene="ycbL"
/locus_tag="SF0924"
/note="Salmonella enterica serovar typhimurium YcbL and
related proteins; MBL-fold metallo hydrolase domain;
Region: YcbL-like_MBL-fold; cd07737"
/db_xref="CDD:293823"
misc_feature order(969038..969040,969044..969046,969050..969055,
969266..969271,969323..969325,969446..969448)
/gene="ycbL"
/locus_tag="SF0924"
/note="putative active site [active]"
/db_xref="CDD:293823"
gene complement(969743..970933)
/gene="aspC"
/locus_tag="SF0925"
/db_xref="GeneID:1023890"
CDS complement(969743..970933)
/gene="aspC"
/locus_tag="SF0925"
/note="Code: E; COG: COG1448"
/codon_start=1
/transl_table=11
/product="aromatic amino acid aminotransferase"
/protein_id="NP_706847.1"
/db_xref="GeneID:1023890"
/translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP
VLTSVKKAEQYLLENETTKNYLGIDGILEFGRCTQELLFGKGSALINDKRARTAQTPG
GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSEIVDRAFSQMK
AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCESI
VAVL"
misc_feature complement(969746..970933)
/gene="aspC"
/locus_tag="SF0925"
/note="aromatic amino acid transaminase; Region: PRK09257"
/db_xref="CDD:181731"
misc_feature complement(order(970172..970174,970196..970201,
970205..970207,970292..970294,970385..970387,
970544..970546,970622..970630))
/gene="aspC"
/locus_tag="SF0925"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature complement(order(970055..970057,970064..970066,
970172..970180,970313..970315,970514..970516,
970619..970621))
/gene="aspC"
/locus_tag="SF0925"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature complement(970196..970198)
/gene="aspC"
/locus_tag="SF0925"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene 970932..971102
/locus_tag="SF0925a"
/db_xref="GeneID:16608312"
CDS 970932..971102
/locus_tag="SF0925a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439236.1"
/db_xref="GeneID:16608312"
/translation="MTRFHYGYRREVRYQGNGRFTKFQLLLMKTQAVFARREIALEGI
KKTGPTSCFFGI"
gene complement(971118..972206)
/gene="ompF"
/locus_tag="SF0926"
/db_xref="GeneID:1023895"
CDS complement(971118..972206)
/gene="ompF"
/locus_tag="SF0926"
/note="Code: M; COG: COG3203"
/codon_start=1
/transl_table=11
/product="outer membrane protein F"
/protein_id="NP_706848.1"
/db_xref="GeneID:1023895"
/translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKTVGLHY
FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
YIINQIDSDNKLGVGSDDTVAVGIVYQF"
misc_feature complement(971121..972206)
/gene="ompF"
/locus_tag="SF0926"
/note="porin OmpF; Region: PRK10002"
/db_xref="CDD:236639"
misc_feature complement(order(971121..971123,971127..971129,
971133..971135,971220..971222,971229..971234,
971736..971741,971745..971747,971841..971849,
971877..971891,971895..971900,971937..971948,
971952..971954,971958..971966,971970..971972,
971988..972002,972081..972089,972108..972110,
972114..972116))
/gene="ompF"
/locus_tag="SF0926"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238208"
misc_feature complement(order(971745..971747,971802..971804,
971895..971897,972015..972017,972093..972095))
/gene="ompF"
/locus_tag="SF0926"
/note="eyelet of channel [active]"
/db_xref="CDD:238208"
gene complement(972807..974207)
/gene="asnC"
/locus_tag="SF0927"
/db_xref="GeneID:1023893"
CDS complement(972807..974207)
/gene="asnC"
/locus_tag="SF0927"
/note="Code: J; COG: COG0017"
/codon_start=1
/transl_table=11
/product="asparaginyl-tRNA synthetase"
/protein_id="NP_706849.2"
/db_xref="GeneID:1023893"
/translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
VRDVIPFPRTPRNASF"
misc_feature complement(972810..974207)
/gene="asnC"
/locus_tag="SF0927"
/note="asparaginyl-tRNA synthetase; Validated; Region:
asnC; PRK03932"
/db_xref="CDD:235176"
gene complement(974376..975578)
/gene="pncB"
/locus_tag="SF0928"
/db_xref="GeneID:1023900"
CDS complement(974376..975578)
/gene="pncB"
/locus_tag="SF0928"
/note="Code: H; COG: COG1488"
/codon_start=1
/transl_table=11
/product="nicotinate phosphoribosyltransferase"
/protein_id="NP_706850.2"
/db_xref="GeneID:1023900"
/translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
YQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
LPHIKKAS"
misc_feature complement(974379..975578)
/gene="pncB"
/locus_tag="SF0928"
/note="nicotinate phosphoribosyltransferase; Provisional;
Region: PRK05321"
/db_xref="CDD:235406"
misc_feature complement(order(974550..974552,974559..974564,
974568..974570,974637..974642,974730..974732,
974973..974978,975045..975053))
/gene="pncB"
/locus_tag="SF0928"
/note="active site"
/db_xref="CDD:238695"
gene 975844..978459
/gene="pepN"
/locus_tag="SF0929"
/db_xref="GeneID:1023908"
CDS 975844..978459
/gene="pepN"
/locus_tag="SF0929"
/note="Code: E; COG: COG0308"
/codon_start=1
/transl_table=11
/product="aminopeptidase"
/protein_id="NP_706851.1"
/db_xref="GeneID:1023908"
/translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEEGALVISNLPERFTLKIINEISLA
ANTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNG
NRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDR
GNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKY
VLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD
LGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMI
HTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPVVT
VKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVN
SVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNGFSRW
DAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVN
EMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLR
NACLRFLAFGETHLADVLVSKQYHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKW
HQDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAF
HAEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLE
NLSGDLYEKITKALA"
misc_feature 975844..978456
/gene="pepN"
/locus_tag="SF0929"
/note="aminopeptidase N; Provisional; Region: pepN;
PRK14015"
/db_xref="CDD:237585"
misc_feature order(976201..976203,976207..976209,976618..976638,
976726..976728,976735..976740,976747..976749,
976801..976806,976963..976965,976972..976974,
976987..976992)
/gene="pepN"
/locus_tag="SF0929"
/note="active site"
/db_xref="CDD:341063"
gene complement(978666..979433)
/gene="ssuB"
/locus_tag="SF0930"
/db_xref="GeneID:1023909"
CDS complement(978666..979433)
/gene="ssuB"
/locus_tag="SF0930"
/note="Code: P; COG: COG1116"
/codon_start=1
/transl_table=11
/product="aliphatic sulfonates ABC transporter ATP-binding
protein"
/protein_id="NP_706852.1"
/db_xref="GeneID:1023909"
/translation="MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVG
RSGGGKSTLLHLLAGLETPTAGDVLAGTTPLAEIQDDTRMMFQDARLLPWKSVIDNVG
LGLKGQWRDAARRALAAAGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL
GALDALTRLEMQDLIVSLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKISLDLTVD
IPRPRRLGSVRLAELEAEVLQRVMRRGHSEQLIRRHG"
misc_feature complement(978675..979433)
/gene="ssuB"
/locus_tag="SF0930"
/note="aliphatic sulfonates transport ATP-binding subunit;
Provisional; Region: ssuB; PRK11247"
/db_xref="CDD:183055"
misc_feature complement(979281..979304)
/gene="ssuB"
/locus_tag="SF0930"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(order(978861..978863,978960..978965,
979173..979175,979278..979286,979290..979295))
/gene="ssuB"
/locus_tag="SF0930"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213179"
misc_feature complement(979173..979184)
/gene="ssuB"
/locus_tag="SF0930"
/note="Q-loop/lid; other site"
/db_xref="CDD:213179"
misc_feature complement(979008..979037)
/gene="ssuB"
/locus_tag="SF0930"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213179"
misc_feature complement(978960..978977)
/gene="ssuB"
/locus_tag="SF0930"
/note="Walker B; other site"
/db_xref="CDD:213179"
misc_feature complement(978942..978953)
/gene="ssuB"
/locus_tag="SF0930"
/note="D-loop; other site"
/db_xref="CDD:213179"
misc_feature complement(978855..978875)
/gene="ssuB"
/locus_tag="SF0930"
/note="H-loop/switch region; other site"
/db_xref="CDD:213179"
gene complement(979430..980083)
/locus_tag="SF0931"
/db_xref="GeneID:1023892"
CDS complement(979430..980083)
/locus_tag="SF0931"
/note="Code: P; COG: COG0600"
/codon_start=1
/transl_table=11
/product="taurine transport system permease-like protein"
/protein_id="NP_706853.1"
/db_xref="GeneID:1023892"
/translation="MITDVWKYRGKSRQHLAISSWRALIGFSIGGSLGLILGLISGLS
RWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIR
NIDRGLVEMARSYGLSGIPLFIHVILPDALPSIMVGVRFALGLMWLTLIVAETISANS
GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKETTI"
misc_feature complement(979433..>980056)
/locus_tag="SF0931"
/note="Transmembrane subunit (TM) found in Periplasmic
Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which generally bind type 2 PBPs. These types
of transporters consist of a PBP, two TMs, and two
cytoplasmic ABC ATPase subunits, and...; Region: TM_PBP2;
cl00427"
/db_xref="CDD:444901"
misc_feature complement(order(979511..979516,979523..979528,
979535..979540,979544..979549,979556..979561,
979589..979594,979619..979624,979631..979642,
979661..979663,979670..979675,979715..979717,
979766..979768,979775..979780,979790..979792,
979796..979801,979808..979810,979814..979816,
979820..979825,979871..979873,979877..979882,
979889..979918,979922..979933))
/locus_tag="SF0931"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(979625..979642,979871..979915))
/locus_tag="SF0931"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(979559..979561,979589..979591,
979598..979600,979622..979624,979871..979873))
/locus_tag="SF0931"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(979694..979696,979706..979711,
979727..979765))
/locus_tag="SF0931"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
mobile_element complement(980047..981377)
/mobile_element_type="insertion sequence:IS2"
gene complement(980058..980963)
/locus_tag="SF0932"
/db_xref="GeneID:1026207"
CDS complement(980058..980963)
/locus_tag="SF0932"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_706854.1"
/db_xref="GeneID:1026207"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGPRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(980061..980963)
/locus_tag="SF0932"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(980921..981331)
/locus_tag="SF0933"
/db_xref="GeneID:1023878"
CDS complement(980921..981331)
/locus_tag="SF0933"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706855.3"
/db_xref="GeneID:1023878"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(980924..981286)
/locus_tag="SF0933"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene complement(981569..982714)
/gene="ycbN"
/locus_tag="SF0934"
/db_xref="GeneID:1023897"
CDS complement(981569..982714)
/gene="ycbN"
/locus_tag="SF0934"
/note="Code: C; COG: COG2141"
/codon_start=1
/transl_table=11
/product="alkanesulfonate monooxygenase"
/protein_id="NP_706856.1"
/db_xref="GeneID:1023897"
/translation="MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGY
TGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGR
ALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLLGETVNFNGKHIHVRGA
KLLFPPIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAY
GRKIRFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFARTDSVGQQRMAAL
HNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPH
LEEAYRVGELLFPHLDVAIPEIPQPQPLNPQGEAVANDFIPRKVAQS"
misc_feature complement(981575..982708)
/gene="ycbN"
/locus_tag="SF0934"
/note="alkanesulfonate monooxygenase; Provisional; Region:
PRK00719"
/db_xref="CDD:234821"
misc_feature complement(order(982028..982030,982034..982036,
982130..982132,982172..982177,982331..982333,
982391..982393,982550..982552,982679..982681,
982691..982693))
/gene="ycbN"
/locus_tag="SF0934"
/note="active site"
/db_xref="CDD:238527"
misc_feature complement(order(982223..982228,982232..982243,
982247..982249,982361..982366,982373..982375,
982424..982426,982433..982435,982442..982447,
982454..982459,982463..982465,982514..982516,
982523..982528,982535..982537,982544..982561))
/gene="ycbN"
/locus_tag="SF0934"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238527"
misc_feature complement(982481..982486)
/gene="ycbN"
/locus_tag="SF0934"
/note="non-prolyl cis peptide bond [active]"
/db_xref="CDD:238527"
misc_feature complement(order(981980..981997,982016..982027,
982208..982249,982334..982342,982361..982387))
/gene="ycbN"
/locus_tag="SF0934"
/note="insertion regions; other site"
/db_xref="CDD:238527"
gene complement(982711..983712)
/gene="ycbO"
/locus_tag="SF0935"
/db_xref="GeneID:1023919"
CDS complement(982711..983712)
/gene="ycbO"
/locus_tag="SF0935"
/note="Code: P; COG: COG0715"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706857.4"
/db_xref="GeneID:1023919"
/translation="MFRFLTFCLCEVMPMRNIIKLALAGLLSVSTFAVAAESSPEALR
IGYQKGSIGMVLAKSHQLLEKRYPQSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPP
IFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLR
ALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTD
LNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVI
ASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
misc_feature complement(982732..983670)
/gene="ycbO"
/locus_tag="SF0935"
/note="alkanesulfonate transporter substrate-binding
subunit; Provisional; Region: PRK11553"
/db_xref="CDD:236929"
misc_feature complement(order(983041..983043,983113..983115,
983122..983127,983251..983253,983266..983268,
983338..983340,983473..983475,983566..983568))
/gene="ycbO"
/locus_tag="SF0935"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270275"
gene complement(983663..984238)
/gene="ycbP"
/locus_tag="SF0936"
/db_xref="GeneID:1023889"
CDS complement(983663..984238)
/gene="ycbP"
/locus_tag="SF0936"
/note="Code: R; COG: COG0431"
/codon_start=1
/transl_table=11
/product="NAD(P)H-dependent FMN reductase"
/protein_id="NP_706858.2"
/db_xref="GeneID:1023889"
/translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAP
EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQLIDYHHRPQFTPNLQTH
LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
misc_feature complement(983666..984238)
/gene="ycbP"
/locus_tag="SF0936"
/note="NAD(P)H-dependent FMN reductase; Provisional;
Region: PRK10569"
/db_xref="CDD:182557"
gene complement(984157..984570)
/locus_tag="SF0937"
/db_xref="GeneID:1023887"
CDS complement(984157..984570)
/locus_tag="SF0937"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706859.1"
/db_xref="GeneID:1023887"
/translation="MASVVAWLANAVGCTPSAVPLKVNVAFLVTVTSQPSKAIGTSVL
TPETAPLVCNLVALTFGNVTTESFVAATRVQAGAITLPLTFSCLSDRLTELLSMLTKK
RTIGYKERVCVSSPWRVVLAFLLAPAPCWNMRGKN"
mobile_element 984596..985335
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene 984651..984926
/gene="insA"
/locus_tag="SF0938"
/db_xref="GeneID:1023883"
CDS 984651..984926
/gene="insA"
/locus_tag="SF0938"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706860.1"
/db_xref="GeneID:1023883"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 984672..>984923
/gene="insA"
/locus_tag="SF0938"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
mobile_element complement(985431..986198)
/mobile_element_type="insertion sequence:IS1"
gene complement(985446..985841)
/gene="insB"
/locus_tag="SF0939"
/db_xref="GeneID:1023888"
CDS complement(985446..985841)
/gene="insB"
/locus_tag="SF0939"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706861.1"
/db_xref="GeneID:1023888"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKAIGHYLNIKHYQ"
misc_feature complement(985449..985838)
/gene="insB"
/locus_tag="SF0939"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(985868..986143)
/gene="insA"
/locus_tag="SF0940"
/db_xref="GeneID:1023931"
CDS complement(985868..986143)
/gene="insA"
/locus_tag="SF0940"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706862.1"
/db_xref="GeneID:1023931"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<985871..986122)
/gene="insA"
/locus_tag="SF0940"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 986284..988884
/gene="ycbS"
/locus_tag="SF0941"
/db_xref="GeneID:1023886"
CDS 986284..988884
/gene="ycbS"
/locus_tag="SF0941"
/note="Code: N; COG: COG3188"
/codon_start=1
/transl_table=11
/product="outer membrane usher protein"
/protein_id="NP_706863.2"
/db_xref="GeneID:1023886"
/translation="MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFF
KDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTE
SLDAMGVNTDAFPAFKQLDKQVCVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR
GYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNS
TWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNM
LPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVE
IKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQTTLQWGGP
WGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLY
AKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFY
TKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGVSWNY
SKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHITQNLG
LTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNY
ALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSY
RENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRF
GAIATLDGIQTNSGIIDDDGSLYMSGLPAQGAITVRWGEAPDQICHISYQLTEQQINS
AITRMDAICR"
misc_feature 986284..988881
/gene="ycbS"
/locus_tag="SF0941"
/note="outer membrane usher protein; Provisional; Region:
PRK15193"
/db_xref="CDD:237919"
gene 988875..989858
/locus_tag="SF0942"
/db_xref="GeneID:1023884"
CDS 988875..989858
/locus_tag="SF0942"
/codon_start=1
/transl_table=11
/product="FimH-like protein"
/protein_id="NP_706864.1"
/db_xref="GeneID:1023884"
/translation="MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYIGQCHTTQGNPYI
GVNFGVKTLDEEENTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVY
LGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASG
NSGSFSLKILQPFVGSVVIPPMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSL
GSCSVNAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSL
TATSDPSYPQAIKTSRPGVGVVVTDSQHNIISPAGGTLPLSIPDDADSIRE"
misc_feature 988893..989855
/locus_tag="SF0942"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
gene 989956..990498
/locus_tag="SF0943"
/db_xref="GeneID:1023921"
CDS 989956..990498
/locus_tag="SF0943"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="fimbrial-like protein"
/protein_id="NP_706865.1"
/db_xref="GeneID:1023921"
/translation="MKKKTIYQCVILFFSLLNIHVGMAGPEQVSMHIYGNVVDQGCDV
ATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAP
TLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKST
KAGATGGNATAVLYFDLVYQ"
misc_feature 990043..990495
/locus_tag="SF0943"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
gene 990458..991021
/locus_tag="SF0944"
/db_xref="GeneID:1023885"
CDS 990458..991021
/locus_tag="SF0944"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="fimbrial-like protein"
/protein_id="NP_706866.1"
/db_xref="GeneID:1023885"
/translation="MRRRFSILIWFTSEGVMLKRIIWILFLLGLTGGCELFAHDGTVN
ISGSFRRNTCVLAQDSKQINVQLGDVSLTRFFHGNYGPEKSFIINLQDCGTDVSTVDV
TFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTF
YAQLRPVNSDVQSGKVNASATFVLHYD"
misc_feature 990512..991018
/locus_tag="SF0944"
/note="Pilin (type 1 fimbrial protein) [Cell motility];
Region: FimA; COG3539"
/db_xref="CDD:442760"
gene 990987..991724
/gene="ycbF"
/locus_tag="SF0945"
/db_xref="GeneID:1023874"
CDS 990987..991724
/gene="ycbF"
/locus_tag="SF0945"
/note="Code: N; COG: COG3121"
/codon_start=1
/transl_table=11
/product="putativi pili assembly chaperone"
/protein_id="NP_706867.1"
/db_xref="GeneID:1023874"
/translation="MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRF
IFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPALLLAAPPLILLKPGT
TGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG
DPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTNWCQ
VIAPCHVAWRTINDYGGLSAKKEQNLP"
misc_feature 991014..991721
/gene="ycbF"
/locus_tag="SF0945"
/note="fimbrial chaperone; Region: PRK11385"
/db_xref="CDD:183112"
gene 991835..992845
/gene="pyrD"
/locus_tag="SF0946"
/db_xref="GeneID:1023933"
CDS 991835..992845
/gene="pyrD"
/locus_tag="SF0946"
/note="Code: F; COG: COG0167"
/codon_start=1
/transl_table=11
/product="dihydroorotate dehydrogenase 2"
/protein_id="NP_706868.2"
/db_xref="GeneID:1023933"
/translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
APDLSEDELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
HI"
misc_feature 991835..992842
/gene="pyrD"
/locus_tag="SF0946"
/note="quinone-dependent dihydroorotate dehydrogenase;
Region: PRK05286"
/db_xref="CDD:235388"
gene 992983..993561
/gene="ycbW"
/locus_tag="SF0947"
/db_xref="GeneID:1023911"
CDS 992983..993561
/gene="ycbW"
/locus_tag="SF0947"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706869.1"
/db_xref="GeneID:1023911"
/translation="MLLRFYRVGERQMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRS
RFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKDQKAELVLNALVAIRYLKP
QMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIA
GRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV"
misc_feature 993022..993519
/gene="ycbW"
/locus_tag="SF0947"
/note="Cell-division protein ZapC; Region: ZapC;
pfam07126"
/db_xref="CDD:429305"
gene complement(993558..994667)
/locus_tag="SF0948"
/db_xref="GeneID:1023926"
CDS complement(993558..994667)
/locus_tag="SF0948"
/note="Code: R; COG: COG3217"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706870.1"
/db_xref="GeneID:1023926"
/translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
RCPASVKMEQFRPNLVVSGASAWEEDSWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
LLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLTR"
misc_feature complement(993873..994667)
/locus_tag="SF0948"
/note="N-hydroxylaminopurine reductase subunit YcbX,
contains MOSC domain [Nucleotide transport and metabolism,
Defense mechanisms]; Region: YcbX; COG3217"
/db_xref="CDD:442450"
misc_feature complement(993564..993803)
/locus_tag="SF0948"
/note="Ferredoxin [Energy production and conversion];
Region: Fdx; COG0633"
/db_xref="CDD:440398"
gene 994911..997019
/gene="rlmL"
/locus_tag="SF0949"
/db_xref="GeneID:1023922"
CDS 994911..997019
/gene="rlmL"
/locus_tag="SF0949"
/codon_start=1
/transl_table=11
/product="23S rRNA m(2)G2445 methyltransferase"
/protein_id="NP_706871.1"
/db_xref="GeneID:1023922"
/translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV
YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI
RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
LRGYRDRAGIAPIKETLAAAIVMRSGWQSGTPLLDPMCGSGTLLIEAAMLATDRAPGL
HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTI
DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERHKGKNQYQKLGEKGEFLEVTEYNA
HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT
VDMSRTYLEWAERNLRLNGLTRRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
LSQDFARNRQIHNCWLITAA"
misc_feature 994911..997016
/gene="rlmL"
/locus_tag="SF0949"
/note="bifunctional 23S rRNA
(guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
(guanine(2445)-N(2))-methyltransferase RlmL; Region: rlmL;
PRK11783"
/db_xref="CDD:236981"
gene 997031..998938
/gene="uup"
/locus_tag="SF0950"
/db_xref="GeneID:1023917"
CDS 997031..998938
/gene="uup"
/locus_tag="SF0950"
/note="Code: R; COG: COG0488"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_706872.1"
/db_xref="GeneID:1023917"
/translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
MATRIVDLDRGKLVTYPGNYDQYLQEKEEALRVEELQNAEFDLKLAQEEVWIRQGIKA
RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVNGKQL
VKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
ELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRAFSGGERNRLL
LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKSEEAAAPKAETVKRSSSKLSYKL
QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER
WEYLEALKNGG"
misc_feature 997031..998935
/gene="uup"
/locus_tag="SF0950"
/note="ABC transporter ATPase component; Reviewed; Region:
PRK11147"
/db_xref="CDD:236861"
gene 999068..1000321
/gene="pqiA"
/locus_tag="SF0951"
/db_xref="GeneID:1023929"
CDS 999068..1000321
/gene="pqiA"
/locus_tag="SF0951"
/note="Code: S; COG: COG2995"
/codon_start=1
/transl_table=11
/product="paraquat-inducible membrane protein A"
/protein_id="NP_706873.1"
/db_xref="GeneID:1023929"
/translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF
FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM
VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
TMFSAMTFDPRLSWDRQPESEHEES"
misc_feature 999068..1000318
/gene="pqiA"
/locus_tag="SF0951"
/note="membrane integrity-associated transporter subunit
PqiA; Region: PRK15103"
/db_xref="CDD:237910"
gene 1000326..1001966
/gene="pqiB"
/locus_tag="SF0952"
/db_xref="GeneID:1023923"
CDS 1000326..1001966
/gene="pqiB"
/locus_tag="SF0952"
/note="Code: R; COG: COG3008"
/codon_start=1
/transl_table=11
/product="paraquat-inducible protein B"
/protein_id="NP_706874.2"
/db_xref="GeneID:1023923"
/translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRF
WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
IPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT
MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
misc_feature 1000326..1001963
/gene="pqiB"
/locus_tag="SF0952"
/note="intermembrane transport protein PqiB; Region:
PRK10807"
/db_xref="CDD:182747"
gene 1001963..1002526
/gene="ymbA"
/locus_tag="SF0953"
/db_xref="GeneID:1027561"
CDS 1001963..1002526
/gene="ymbA"
/locus_tag="SF0953"
/note="Code: S; COG: COG3009"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706875.1"
/db_xref="GeneID:1027561"
/translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR
LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
VVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
YDEMVKVLAGVWSQEAASIAQEIKRLP"
misc_feature 1001969..1002514
/gene="ymbA"
/locus_tag="SF0953"
/note="membrane integrity-associated transporter subunit
PqiC; Region: pqiC; NF033620"
/db_xref="CDD:468113"
gene 1002782..1002949
/locus_tag="SF953a"
/db_xref="GeneID:16608313"
CDS 1002782..1002949
/locus_tag="SF953a"
/codon_start=1
/transl_table=11
/product="ribosome modulation factor"
/protein_id="YP_008439237.1"
/db_xref="GeneID:16608313"
/translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLSQRSQWLGGW
REAMADRVVMA"
misc_feature 1002782..1002946
/locus_tag="SF953a"
/note="ribosome modulation factor; Provisional; Region:
PRK14563"
/db_xref="CDD:184747"
gene complement(1003019..1003537)
/gene="fabA"
/locus_tag="SF0954"
/db_xref="GeneID:1023905"
CDS complement(1003019..1003537)
/gene="fabA"
/locus_tag="SF0954"
/note="Code: I; COG: COG0764"
/codon_start=1
/transl_table=11
/product="3-hydroxydecanoyl-ACP dehydratase"
/protein_id="NP_706876.1"
/db_xref="GeneID:1023905"
/translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
LKVGLFQDTSAF"
misc_feature complement(1003022..1003537)
/gene="fabA"
/locus_tag="SF0954"
/note="bifunctional 3-hydroxydecanoyl-ACP
dehydratase/trans-2-decenoyl-ACP isomerase; Region:
PRK05174"
/db_xref="CDD:179953"
misc_feature complement(order(1003217..1003228,1003259..1003264,
1003271..1003276,1003283..1003285,1003451..1003459))
/gene="fabA"
/locus_tag="SF0954"
/note="active site 1 [active]"
/db_xref="CDD:238614"
misc_feature complement(order(1003187..1003192,1003196..1003198,
1003202..1003228,1003283..1003285,1003295..1003297,
1003448..1003450,1003454..1003456))
/gene="fabA"
/locus_tag="SF0954"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238614"
misc_feature complement(order(1003187..1003198,1003298..1003306))
/gene="fabA"
/locus_tag="SF0954"
/note="active site 2 [active]"
/db_xref="CDD:238614"
gene complement(1003607..1005367)
/locus_tag="SF0955"
/db_xref="GeneID:1023916"
CDS complement(1003607..1005367)
/locus_tag="SF0955"
/note="Code: O; COG: COG1067"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease"
/protein_id="NP_706877.1"
/db_xref="GeneID:1023916"
/translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF
ALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLR
HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHHANGGILIISLRT
LLAQPLLWMRLKNIVNRERFDWVAFDVSRPLPVSVPSMPLKLKVILVGERESLADFQE
MEPELSEQAIYSEFEDTLQIVDAESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAA
RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
LADVPVNQSIAITGSVDQFGRVQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
QEGRHRFPWPLRWLNWFIPN"
misc_feature complement(1003652..>1004989)
/locus_tag="SF0955"
/note="Predicted ATP-dependent protease [Posttranslational
modification, protein turnover, chaperones]; Region: LonB;
COG1067"
/db_xref="CDD:440686"
gene 1005552..1005956
/gene="ycbG"
/locus_tag="SF0956"
/db_xref="GeneID:1026214"
CDS 1005552..1005956
/gene="ycbG"
/locus_tag="SF0956"
/note="Code: S; COG: COG3120"
/codon_start=1
/transl_table=11
/product="Ter macrodomain organizer matS-binding protein"
/protein_id="NP_706878.1"
/db_xref="GeneID:1026214"
/translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
RLAGLAQRRGKTLSETIVQLIEDAENKEKVRE"
misc_feature 1005552..1005953
/gene="ycbG"
/locus_tag="SF0956"
/note="macrodomain Ter protein MatP; Region: PRK05097"
/db_xref="CDD:235344"
gene complement(1006082..1007128)
/gene="ompA"
/locus_tag="SF0957"
/db_xref="GeneID:1023906"
CDS complement(1006082..1007128)
/gene="ompA"
/locus_tag="SF0957"
/note="Code: M; COG: COG2885"
/codon_start=1
/transl_table=11
/product="outer membrane protein OmpA"
/protein_id="NP_706879.2"
/db_xref="GeneID:1023906"
/translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
IPNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTA
KLGYPITDDLDIYTRLGGMVWRADTKANVPGGASFKDHDTGVSPVFAGGVEYAITPEI
ATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRFGQGEAAPVVAPAPAPEVQTKHFT
LKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLS
ERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEI
EVKGIKDVVTQPQA"
misc_feature complement(1006085..1007128)
/gene="ompA"
/locus_tag="SF0957"
/note="outer membrane protein A; Reviewed; Region:
PRK10808"
/db_xref="CDD:236764"
gene complement(1007485..1007994)
/gene="sulA"
/locus_tag="SF0958"
/db_xref="GeneID:1023924"
CDS complement(1007485..1007994)
/gene="sulA"
/locus_tag="SF0958"
/codon_start=1
/transl_table=11
/product="SOS cell division inhibitor"
/protein_id="NP_706880.2"
/db_xref="GeneID:1023924"
/translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES
MVRALRTGNYSVVIGWLTDDLTEEEHAELVDAANEGNAMGFIMRPVSASSHTTRQLSG
LKIHSNLYH"
misc_feature complement(1007488..1007991)
/gene="sulA"
/locus_tag="SF0958"
/note="cell division inhibitor SulA; Region: sula;
TIGR00623"
/db_xref="CDD:129710"
gene 1008213..1008638
/locus_tag="SF0959"
/pseudo
/db_xref="GeneID:1023927"
misc_feature 1008213..1008638
/locus_tag="SF0959"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787193 (210 aa). BLAST with
identity of 99% in 137 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element 1008623..1009686
/note="partial"
/mobile_element_type="insertion sequence:IS2"
gene 1008669..1009079
/locus_tag="SF0960"
/db_xref="GeneID:1023949"
CDS 1008669..1009079
/locus_tag="SF0960"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706881.3"
/db_xref="GeneID:1023949"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 1008714..1009076
/locus_tag="SF0960"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene complement(1009650..1011815)
/locus_tag="SF0962"
/db_xref="GeneID:1023910"
CDS complement(1009650..1011815)
/locus_tag="SF0962"
/note="Code: S; COG: COG1289"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706883.1"
/db_xref="GeneID:1023910"
/translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIG
HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGQLMATLN
QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
FQRLMSMQGQACQQLSRCILLRQSYQHDPHFERAFTHIDAALERIRDNGAPADLLKTL
GFLLNNLRAIDAQLATIESEQAQALPRNNDENELADDSPHGLSDIWLRLSRHFTPESA
LFRHAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLV
GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
FEVALPRVIDTLIGCAIAWAAVSYIWPDWKFRNLPRMLERATEANCRYLDAILEQYHQ
GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYIS
ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNQALAGLKQRMQQLEPRAD
SKEPLVVQQVGLLIALLPEIGRLQRQITVPTSGRTGVFH"
misc_feature complement(1009689..1011785)
/locus_tag="SF0962"
/note="TIGR01666 family membrane protein; Region: YCCS"
/db_xref="CDD:130727"
gene complement(1011825..1012271)
/gene="yccF"
/locus_tag="SF0963"
/db_xref="GeneID:1027559"
CDS complement(1011825..1012271)
/gene="yccF"
/locus_tag="SF0963"
/note="Code: S; COG: COG3304"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706884.1"
/db_xref="GeneID:1027559"
/translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE"
misc_feature complement(1011870..1012271)
/gene="yccF"
/locus_tag="SF0963"
/note="YccF domain-containing protein; Region: PRK11770"
/db_xref="CDD:236975"
gene 1012394..1014448
/gene="helD"
/locus_tag="SF0964"
/db_xref="GeneID:1023914"
CDS 1012394..1014448
/gene="helD"
/locus_tag="SF0964"
/note="Code: L; COG: COG0210"
/codon_start=1
/transl_table=11
/product="DNA helicase IV"
/protein_id="NP_706885.2"
/db_xref="GeneID:1023914"
/translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQ
AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA
GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH
ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ
WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM
APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL
AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRI
GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL
ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSGGFPAAARES
IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR
KP"
misc_feature 1012394..1014445
/gene="helD"
/locus_tag="SF0964"
/note="DNA helicase IV; Provisional; Region: helD;
PRK11054"
/db_xref="CDD:182930"
gene complement(1014480..1014947)
/gene="mgsA"
/locus_tag="SF0965"
/db_xref="GeneID:1023912"
CDS complement(1014480..1014947)
/gene="mgsA"
/locus_tag="SF0965"
/note="Code: G; COG: COG1803"
/codon_start=1
/transl_table=11
/product="methylglyoxal synthase"
/protein_id="NP_706886.3"
/db_xref="GeneID:1023912"
/translation="MYIMELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHV
LYATGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHD
PDVKALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
misc_feature complement(1014495..1014917)
/gene="mgsA"
/locus_tag="SF0965"
/note="methylglyoxal synthase; Validated; Region: mgsA;
PRK05234"
/db_xref="CDD:179969"
misc_feature complement(order(1014645..1014647,1014726..1014728,
1014741..1014746,1014795..1014800,1014804..1014806,
1014870..1014872,1014888..1014890))
/gene="mgsA"
/locus_tag="SF0965"
/note="active site"
/db_xref="CDD:238710"
misc_feature complement(order(1014564..1014566,1014573..1014584,
1014591..1014608,1014612..1014620,1014627..1014629,
1014636..1014638,1014663..1014665,1014702..1014704,
1014720..1014725,1014735..1014740,1014744..1014749,
1014798..1014800,1014879..1014881))
/gene="mgsA"
/locus_tag="SF0965"
/note="dimer interfaces [polypeptide binding]; other site"
/db_xref="CDD:238710"
misc_feature complement(order(1014645..1014647,1014726..1014728))
/gene="mgsA"
/locus_tag="SF0965"
/note="catalytic residues [active]"
/db_xref="CDD:238710"
gene complement(1015034..1015696)
/locus_tag="SF0966"
/db_xref="GeneID:1023913"
CDS complement(1015034..1015696)
/locus_tag="SF0966"
/note="Code: S; COG: COG3110"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706887.1"
/db_xref="GeneID:1023913"
/translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
SS"
misc_feature complement(1015037..1015696)
/locus_tag="SF0966"
/note="DUF2057 family protein; Region: PRK03641"
/db_xref="CDD:179619"
gene 1015815..1016282
/locus_tag="SF0967"
/db_xref="GeneID:1023899"
CDS 1015815..1016282
/locus_tag="SF0967"
/note="Code: R; COG: COG1832"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706888.1"
/db_xref="GeneID:1023899"
/translation="MVGMSALSYTLLNSLEEIMKETDIAGILTSTHTIALVGASDKPD
RPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAW
GVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
misc_feature 1015863..1016279
/locus_tag="SF0967"
/note="Predicted CoA-binding protein [General function
prediction only]; Region: YccU; COG1832"
/db_xref="CDD:441437"
gene complement(1016327..1016695)
/gene="yccV"
/locus_tag="SF0968"
/db_xref="GeneID:1023941"
CDS complement(1016327..1016695)
/gene="yccV"
/locus_tag="SF0968"
/codon_start=1
/transl_table=11
/product="heat shock protein HspQ"
/protein_id="NP_706889.1"
/db_xref="GeneID:1023941"
/translation="MWNFTLISKVKISREVTMIASKFGIGQQVRHSLLGYLGVVVDID
PVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQP
SMDELAQTIRKQLQAPRLRN"
misc_feature complement(1016330..1016644)
/gene="yccV"
/locus_tag="SF0968"
/note="heat shock protein HspQ; Provisional; Region:
PRK14129"
/db_xref="CDD:184526"
gene complement(1016702..1017892)
/locus_tag="SF0970"
/db_xref="GeneID:1023901"
CDS complement(1016702..1017892)
/locus_tag="SF0970"
/note="Code: R; COG: COG1092"
/codon_start=1
/transl_table=11
/product="23S rRNA m(5)C1962 methyltransferase"
/protein_id="NP_706890.1"
/db_xref="GeneID:1023901"
/translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD
HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALITALQTLYPECAIYDRSDVA
VRKKEGMELTHGLLTGELPPALLPIEEHGMNLLVDIHHGHKTAYYLDQRDSRLATRRY
VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
CRVM"
misc_feature complement(1016705..1017892)
/locus_tag="SF0970"
/note="23S rRNA (cytosine(1962)-C(5))-methyltransferase
RlmI; Region: PRK15128"
/db_xref="CDD:185082"
gene 1017987..1018265
/locus_tag="SF0969"
/db_xref="GeneID:1023958"
CDS 1017987..1018265
/locus_tag="SF0969"
/note="Code: C; COG: COG1254"
/codon_start=1
/transl_table=11
/product="acylphosphatase"
/protein_id="NP_706891.2"
/db_xref="GeneID:1023958"
/translation="MSKICIIAWIYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR"
misc_feature <1017987..1018262
/locus_tag="SF0969"
/note="Region: Acylphosphatase; cl00551"
/db_xref="CDD:444972"
gene complement(1018262..1018648)
/gene="yccK"
/locus_tag="SF0971"
/db_xref="GeneID:1026221"
CDS complement(1018262..1018648)
/gene="yccK"
/locus_tag="SF0971"
/note="Code: P; COG: COG2920"
/codon_start=1
/transl_table=11
/product="sulfite reductase"
/protein_id="NP_706892.3"
/db_xref="GeneID:1026221"
/translation="MRGFVFCYTAASLIKVVIIMLIFEGKEIETDTEGYLKESSQWSE
PLAVVIAENEGISLSPEHWEVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRY
LYRLFPKGPAKQATKIAGLPKPVKCI"
misc_feature complement(1018265..1018591)
/gene="yccK"
/locus_tag="SF0971"
/note="sulfurtransferase TusE; Region: PRK11508"
/db_xref="CDD:183167"
gene complement(1018682..1019341)
/gene="yccA"
/locus_tag="SF0972"
/db_xref="GeneID:1023915"
CDS complement(1018682..1019341)
/gene="yccA"
/locus_tag="SF0972"
/note="Code: R; COG: COG0670"
/codon_start=1
/transl_table=11
/product="HflBKC-binding inner membrane protein"
/protein_id="NP_706893.1"
/db_xref="GeneID:1023915"
/translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMIANIFLQLPAL
HLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
D"
misc_feature complement(1018685..1019341)
/gene="yccA"
/locus_tag="SF0972"
/note="FtsH protease modulator YccA; Region: PRK10447"
/db_xref="CDD:182469"
gene complement(1019548..1019635)
/locus_tag="SF4464"
/db_xref="GeneID:3161804"
tRNA complement(1019548..1019635)
/locus_tag="SF4464"
/product="tRNA-Ser"
/codon_recognized="UCA"
/db_xref="GeneID:3161804"
gene 1020061..1021179
/gene="hyaA"
/locus_tag="SF0973"
/db_xref="GeneID:1023950"
CDS 1020061..1021179
/gene="hyaA"
/locus_tag="SF0973"
/note="Code: C; COG: COG1740"
/codon_start=1
/transl_table=11
/product="hydrogenase-1 small subunit"
/protein_id="NP_706894.2"
/db_xref="GeneID:1023950"
/translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE
EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
VAAAVGVHAVASSVDQRRRHNQQPTETEHQPGNEDKQA"
misc_feature 1020064..1021140
/gene="hyaA"
/locus_tag="SF0973"
/note="hydrogenase (NiFe) small subunit (hydA); Region:
hydA; TIGR00391"
/db_xref="CDD:273053"
gene 1021176..1022969
/gene="hyaB"
/locus_tag="SF0974"
/db_xref="GeneID:1023947"
CDS 1021176..1022969
/gene="hyaB"
/locus_tag="SF0974"
/note="Code: C; COG: COG0374"
/codon_start=1
/transl_table=11
/product="hydrogenase 1 large subunit"
/protein_id="NP_706895.1"
/db_xref="GeneID:1023947"
/translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT
NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN
ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP
GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK
IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI
PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNV
LPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ
ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG
RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP
RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI
LRTLHSFDPCLACSTHVLGDDGSELISVQVR"
misc_feature 1021176..1022966
/gene="hyaB"
/locus_tag="SF0974"
/note="Ni/Fe-hydrogenase large subunit; Region: PRK10170"
/db_xref="CDD:182281"
gene 1022988..1023695
/gene="hyaC"
/locus_tag="SF0975"
/db_xref="GeneID:1023945"
CDS 1022988..1023695
/gene="hyaC"
/locus_tag="SF0975"
/note="Code: C; COG: COG1969"
/codon_start=1
/transl_table=11
/product="hydrogenase 1 b-type cytochrome subunit"
/protein_id="NP_706896.1"
/db_xref="GeneID:1023945"
/translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
SVSGEATYLFYMGYIRLIHFSAGMIFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMV
NGYRSHKFGKISNKERS"
misc_feature 1022988..1023692
/gene="hyaC"
/locus_tag="SF0975"
/note="Ni/Fe-hydrogenase b-type cytochrome subunit;
Region: PRK10171"
/db_xref="CDD:182282"
gene 1023692..1024279
/gene="hyaD"
/locus_tag="SF0976"
/db_xref="GeneID:1023953"
CDS 1023692..1024279
/gene="hyaD"
/locus_tag="SF0976"
/note="Code: C; COG: COG0680"
/codon_start=1
/transl_table=11
/product="hydrogenase 1 maturation protease"
/protein_id="NP_706897.1"
/db_xref="GeneID:1023953"
/translation="MSEQHVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLPAAEQSALAQLAAWGSVP
QPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
misc_feature 1023692..1024276
/gene="hyaD"
/locus_tag="SF0976"
/note="hydrogenase 1 maturation protease; Provisional;
Region: PRK10264"
/db_xref="CDD:182345"
misc_feature order(1023728..1023730,1023770..1023772,1023818..1023826)
/gene="hyaD"
/locus_tag="SF0976"
/note="putative substrate-binding site [active]"
/db_xref="CDD:99873"
misc_feature order(1023746..1023748,1023884..1023886,1023977..1023979)
/gene="hyaD"
/locus_tag="SF0976"
/note="nickel binding site [ion binding]; other site"
/db_xref="CDD:99873"
gene 1024276..1024674
/gene="hyaE"
/locus_tag="SF0977"
/db_xref="GeneID:1023902"
CDS 1024276..1024674
/gene="hyaE"
/locus_tag="SF0977"
/codon_start=1
/transl_table=11
/product="hydrogenase-1 operon protein HyaE"
/protein_id="NP_706898.1"
/db_xref="GeneID:1023902"
/translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGN
YRGVLNGIHPWAELINLMRGLVEPQQERAS"
misc_feature 1024276..1024671
/gene="hyaE"
/locus_tag="SF0977"
/note="hydrogenase-1 operon protein HyaE; Provisional;
Region: PRK11509"
/db_xref="CDD:183168"
gene 1024671..1025660
/gene="hyaF"
/locus_tag="SF0978"
/db_xref="GeneID:1027562"
CDS 1024671..1025660
/gene="hyaF"
/locus_tag="SF0978"
/codon_start=1
/transl_table=11
/product="Hydrogenase-1 operon protein hyaF"
/protein_id="NP_706899.1"
/db_xref="GeneID:1027562"
/translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA
HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
DDSKSEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
IDGLMNGLPLAHELLAHVRNPDAQPDSINLTQLPISEADRLFLSRLNGPGNIQIRTIG
YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDCAIRLTRYV
NGWRELHPRKTGAQTSRRKVAGGQTGGWLRAAGVVAGGNAKSLADRFAVTAAH"
misc_feature 1025166..1025486
/gene="hyaF"
/locus_tag="SF0978"
/note="HupH hydrogenase expression protein, C-terminal
conserved region; Region: HupH_C; pfam04809"
/db_xref="CDD:428133"
gene 1026167..1027711
/gene="appC"
/locus_tag="SF0980"
/db_xref="GeneID:1023948"
CDS 1026167..1027711
/gene="appC"
/locus_tag="SF0980"
/note="Code: C; COG: COG1271"
/codon_start=1
/transl_table=11
/product="cytochrome bd-II oxidase subunit 1"
/protein_id="NP_706901.2"
/db_xref="GeneID:1023948"
/translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALM
AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALR
SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
PTQQQG"
misc_feature 1026167..1027708
/gene="appC"
/locus_tag="SF0980"
/note="cytochrome bd-II oxidase subunit 1; Provisional;
Region: PRK15035"
/db_xref="CDD:184995"
gene 1027723..1028859
/gene="appB"
/locus_tag="SF0981"
/db_xref="GeneID:1023937"
CDS 1027723..1028859
/gene="appB"
/locus_tag="SF0981"
/note="Code: C; COG: COG1294"
/codon_start=1
/transl_table=11
/product="cytochrome bd-II oxidase subunit 2"
/protein_id="NP_706902.1"
/db_xref="GeneID:1023937"
/translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLA
GYWLWVGIDGFVLLAQDANGPSHPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL
TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNKNELY"
misc_feature 1027723..1028856
/gene="appB"
/locus_tag="SF0981"
/note="cytochrome d ubiquinol oxidase subunit II; Region:
PRK15028"
/db_xref="CDD:184988"
gene 1029043..1030341
/gene="appA"
/locus_tag="SF0982"
/db_xref="GeneID:1023932"
CDS 1029043..1030341
/gene="appA"
/locus_tag="SF0982"
/codon_start=1
/transl_table=11
/product="phosphoanhydride phosphorylase"
/protein_id="NP_706903.2"
/db_xref="GeneID:1023932"
/translation="MKAILIPFLSLLIPLTPQSAFAQSEPELKLESMVIVSRHGVRAP
TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQS
AQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA
NVTDAILCRAGGSIADFTGHRQTVFRELERVLNFPQSNLCLNREKQDESCSLTQALPS
ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
YLLQRTPEVARSRATPLLDLIMAALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
misc_feature 1029043..1030338
/gene="appA"
/locus_tag="SF0982"
/note="AppA family phytase/histidine-type acid
phosphatase; Region: PRK10172"
/db_xref="CDD:182283"
misc_feature order(1029154..1029159,1029166..1029168,1029382..1029384,
1030015..1030020)
/gene="appA"
/locus_tag="SF0982"
/note="catalytic core [active]"
/db_xref="CDD:132717"
gene complement(1030456..1032402)
/locus_tag="SF0983"
/db_xref="GeneID:1023956"
CDS complement(1030456..1032402)
/locus_tag="SF0983"
/note="Code: N; COG: COG3206"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706904.1"
/db_xref="GeneID:1023956"
/translation="MIPNSSPESAPEIQLLQSRMILGKTIAELNLRDIVEQKYFPIVG
RGWARLTKEKLGELAISWMHIPQLNGQDQQLTLTVGENGHYTLEGEEFTVNGMVGQRL
EKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETFTVSERSKESGMLELTMTGDD
PQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQLPEVRSELDQAEEKLNVYRQQ
RDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLYKKDHPTYRALLEKRQTLEQE
RKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSISKSSAIGNVRIIDP
AVTQPQPVKPKKALNVVLGFILGLFISVSAVLARAMLRRGVEAPEQLEEHGISVYSTI
PMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPADSAVEAVRALRTSLHFAMME
TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHG
LSEYLAGKDELNKVIQHFGKGDFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLV
IVDTPPMLAVSNAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNG
VIKRASTAYSYGYNYYGYSYSEKE"
misc_feature complement(1030459..1032402)
/locus_tag="SF0983"
/note="tyrosine-protein kinase; Region: PRK09841"
/db_xref="CDD:182106"
gene complement(1032642..1033100)
/gene="yccY"
/locus_tag="SF0984"
/db_xref="GeneID:1023936"
CDS complement(1032642..1033100)
/gene="yccY"
/locus_tag="SF0984"
/note="Code: T; COG: COG0394"
/codon_start=1
/transl_table=11
/product="phosphatase"
/protein_id="NP_706905.3"
/db_xref="GeneID:1023936"
/translation="MDSNMAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAG
VHGLVKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIA
PEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYSMLERASQEWAKRLSR"
misc_feature complement(1032645..1033076)
/gene="yccY"
/locus_tag="SF0984"
/note="phosphotyrosine-protein phosphatase; Provisional;
Region: etp; PRK11391"
/db_xref="CDD:138553"
misc_feature complement(order(1032726..1032728,1032732..1032734,
1033029..1033052))
/gene="yccY"
/locus_tag="SF0984"
/note="active site"
/db_xref="CDD:319971"
gene complement(1033076..1034215)
/gene="yccZ"
/locus_tag="SF0985"
/db_xref="GeneID:1023946"
CDS complement(1033076..1034215)
/gene="yccZ"
/locus_tag="SF0985"
/note="Code: M; COG: COG1596"
/codon_start=1
/transl_table=11
/product="polysaccharide export protein Wza"
/protein_id="NP_706906.2"
/db_xref="GeneID:1023946"
/translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQY
DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
misc_feature complement(1033085..1034215)
/gene="yccZ"
/locus_tag="SF0985"
/note="polysaccharide export protein Wza; Provisional;
Region: PRK15078"
/db_xref="CDD:237903"
gene complement(1034261..1036357)
/gene="ymcA"
/locus_tag="SF0986"
/db_xref="GeneID:1026230"
CDS complement(1034261..1036357)
/gene="ymcA"
/locus_tag="SF0986"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706907.1"
/db_xref="GeneID:1026230"
/translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
FNDLRPALRDTPKPAWQPAPESEGLQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMS
GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
TAPGKSEQLQQQRVEAEDLSAFGRCYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
MSSARYWFTDHLLLDDGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYVKQRDWD
NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKLFDSGVAVG
VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
YQLDPMTAEREVPVGQ"
misc_feature complement(1034285..1036261)
/gene="ymcA"
/locus_tag="SF0986"
/note="Exopolysaccharide biosynthesis protein YbjH;
Region: YjbH; pfam06082"
/db_xref="CDD:428757"
gene complement(1036357..1037103)
/gene="ymcB"
/locus_tag="SF0987"
/db_xref="GeneID:1023925"
CDS complement(1036357..1037103)
/gene="ymcB"
/locus_tag="SF0987"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706908.1"
/db_xref="GeneID:1023925"
/translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPSEQQTLSVGPVEN
VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS
VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL
WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
misc_feature complement(1036666..1037040)
/gene="ymcB"
/locus_tag="SF0987"
/note="Capsule biosynthesis GfcC, N-terminal; Region:
Caps_syn_GfcC_N; pfam20616"
/db_xref="CDD:466765"
misc_feature complement(1036363..1036632)
/gene="ymcB"
/locus_tag="SF0987"
/note="Capsule biosynthesis GfcC C-terminal; Region:
Caps_syn_GfcC_C; pfam06251"
/db_xref="CDD:461862"
gene complement(1037100..1037744)
/gene="ymcC"
/locus_tag="SF0988"
/db_xref="GeneID:1023951"
CDS complement(1037100..1037744)
/gene="ymcC"
/locus_tag="SF0988"
/codon_start=1
/transl_table=11
/product="regulator"
/protein_id="NP_706909.1"
/db_xref="GeneID:1023951"
/translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVAAQQI
QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
EVTNPGRAPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGHNV
LCNVWQEEVTSTLPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP"
misc_feature complement(1037115..1037672)
/gene="ymcC"
/locus_tag="SF0988"
/note="Group 4 capsule polysaccharide lipoprotein gfcB,
YjbF; Region: YjbF; pfam11102"
/db_xref="CDD:431654"
gene complement(1037851..1038174)
/gene="ymcD"
/locus_tag="SF0989"
/db_xref="GeneID:1023940"
CDS complement(1037851..1038174)
/gene="ymcD"
/locus_tag="SF0989"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706910.2"
/db_xref="GeneID:1023940"
/translation="MNKGKVMKHKLSAILMAFMLTTPAAFAAPEAANGTEATTGTTGT
TTTTTGATTTAATTSGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTT
TSTTR"
gene complement(1038598..1038810)
/gene="cspH"
/locus_tag="SF0990"
/db_xref="GeneID:1023928"
CDS complement(1038598..1038810)
/gene="cspH"
/locus_tag="SF0990"
/note="Code: K; COG: COG1278"
/codon_start=1
/transl_table=11
/product="cold shock-like protein CspH"
/protein_id="NP_706911.1"
/db_xref="GeneID:1023928"
/translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
LIPGLRVEFCRVNGLRGPTAANVYLS"
misc_feature complement(1038601..1038810)
/gene="cspH"
/locus_tag="SF0990"
/note="Ribosomal protein S1-like RNA-binding domain. Found
in a wide variety of RNA-associated proteins. Originally
identified in S1 ribosomal protein. This superfamily also
contains the Cold Shock Domain (CSD), which is a homolog
of the S1 domain. Both domains...; Region: S1_like;
cl09927"
/db_xref="CDD:471952"
misc_feature complement(order(1038631..1038633,1038718..1038720,
1038751..1038753,1038778..1038780))
/gene="cspH"
/locus_tag="SF0990"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:239905"
misc_feature complement(order(1038712..1038723,1038742..1038762))
/gene="cspH"
/locus_tag="SF0990"
/note="RNA-binding motif [active]"
/db_xref="CDD:239905"
gene 1039108..1039308
/gene="cspG"
/locus_tag="SF0991"
/db_xref="GeneID:1023934"
CDS 1039108..1039308
/gene="cspG"
/locus_tag="SF0991"
/note="Code: K; COG: COG1278"
/codon_start=1
/transl_table=11
/product="cold shock protein CspG"
/protein_id="NP_706912.2"
/db_xref="GeneID:1023934"
/translation="MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNEN
QKVEFSIEQGQRGPAAANVVTL"
misc_feature 1039108..1039305
/gene="cspG"
/locus_tag="SF0991"
/note="Ribosomal protein S1-like RNA-binding domain. Found
in a wide variety of RNA-associated proteins. Originally
identified in S1 ribosomal protein. This superfamily also
contains the Cold Shock Domain (CSD), which is a homolog
of the S1 domain. Both domains...; Region: S1_like;
cl09927"
/db_xref="CDD:471952"
misc_feature order(1039126..1039128,1039153..1039155,1039186..1039188,
1039273..1039275)
/gene="cspG"
/locus_tag="SF0991"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:239905"
misc_feature order(1039144..1039164,1039183..1039194)
/gene="cspG"
/locus_tag="SF0991"
/note="RNA-binding motif [active]"
/db_xref="CDD:239905"
gene 1039482..1039712
/gene="ymcE"
/locus_tag="SF0992"
/db_xref="GeneID:1023974"
CDS 1039482..1039712
/gene="ymcE"
/locus_tag="SF0992"
/codon_start=1
/transl_table=11
/product="cold shock gene"
/protein_id="NP_706913.1"
/db_xref="GeneID:1023974"
/translation="MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGKM
AYNISYLTRVPGTNTLLACCCLSRPDEVNSEY"
misc_feature 1039482..1039709
/gene="ymcE"
/locus_tag="SF0992"
/note="Putative antitoxin of bacterial toxin-antitoxin
system; Region: YmcE_antitoxin; cl27789"
/db_xref="CDD:332610"
gene 1039702..1039875
/gene="yccL"
/locus_tag="SF0993"
/db_xref="GeneID:1023938"
CDS 1039702..1039875
/gene="yccL"
/locus_tag="SF0993"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706914.1"
/db_xref="GeneID:1023938"
/translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFIAREKM
TGLESYDVKIKIM"
misc_feature 1039702..1039863
/gene="yccL"
/locus_tag="SF0993"
/note="GnsA/GnsB toxin of bacterial toxin-antitoxin
system; Region: GnsAB_toxin; pfam08178"
/db_xref="CDD:285401"
gene complement(1039924..1040997)
/gene="yccM"
/locus_tag="SF0994"
/db_xref="GeneID:1023918"
CDS complement(1039924..1040997)
/gene="yccM"
/locus_tag="SF0994"
/note="Code: C; COG: COG0348"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706915.2"
/db_xref="GeneID:1023918"
/translation="MAEKKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQFLLLAMNI
YIAITFWYWVRYYETAGSTTFVARPGGIEGWLPIAGLMNLKYSLATGQLPSVHAAAML
LLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYL
LLSLFLYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFI
RHAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKKCPSRIPVDKLIQVRTV
ECTGCMTCVESCPVASTLTFSLQKPAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAG
VWQSPVPEELYRRLIPQAPMIGH"
misc_feature complement(1040131..1040943)
/gene="yccM"
/locus_tag="SF0994"
/note="Polyferredoxin NapH [Energy production and
conversion]; Region: NapH; COG0348"
/db_xref="CDD:440117"
gene complement(1041099..1043528)
/locus_tag="SF0995"
/db_xref="GeneID:1023935"
CDS complement(1041099..1043528)
/locus_tag="SF0995"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="histidine protein kinase/phosphatase"
/protein_id="NP_706916.1"
/db_xref="GeneID:1023935"
/translation="MLQALREQGFDTTAIEQQEQEISRSLRQQGELVGRRLQLRQQQR
QLSQQIAAADEIARLEQGQANNATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDL
EYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGV
RAQVATTLTTVSQYSDLLALFQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIEL
HNQHGLAHLEKASARGQYSLLLLGMVSLCALIMILWRVVYRSFTRPLAEQTQALQRLL
DGDIDSPFPETAGVRELDTIGRLMDAFRSSVHALNRHREQLAAQVKARTAELQELVIE
HRQARAEAEKASQAKSAFLTAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLQAITD
SGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLAT
AIADDVPSALMGDPRRIRQVITNLLSNALRFTDEGHIILRSRTDGEQWLVEVEDSGCG
IDPAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLP
LRVATAPVPKTANQAVRLDGLRLLLIEDNPLTQRITVEMLNTSGAQVVAIGNAAQALE
TLQNSEPFAAALVDFDLPDIDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLF
RGIIPKPVPREVLGQLLAHYLQLQANNDLPLDVSQLNEDAQLMGTEKIHEWLALFKQH
ALPLLDEIDIARASQDSEKIKRAAHQLKSSCSSLGMRSASQLCAQLEQQPLSAPLPHE
EITRSVAALEA"
misc_feature complement(1041102..1043528)
/locus_tag="SF0995"
/note="hybrid sensory histidine kinase TorS; Provisional;
Region: PRK11466"
/db_xref="CDD:236914"
gene 1043893..1044921
/gene="torT"
/locus_tag="SF0996"
/db_xref="GeneID:1023967"
CDS 1043893..1044921
/gene="torT"
/locus_tag="SF0996"
/note="Code: G; COG: COG1879"
/codon_start=1
/transl_table=11
/product="TMAO reductase system periplasmic protein TorT"
/protein_id="NP_706917.1"
/db_xref="GeneID:1023967"
/translation="MRVLLFLLLSLFMLSAFSADNLLRWHDAQHFTVQASMPLKAKRV
WKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWG
AEAILLGSSTTSFPDLQKQVANLPVIELVNALDDPQVKSRVGVPWFQMGYQPGRYLVQ
WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQE
MLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASD
QMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFY
QHTSAAKK"
misc_feature 1043938..1044897
/gene="torT"
/locus_tag="SF0996"
/note="TMAO reductase system periplasmic protein TorT;
Provisional; Region: PRK10936"
/db_xref="CDD:236801"
gene complement(1044894..1045586)
/gene="torR"
/locus_tag="SF0998"
/db_xref="GeneID:1023959"
CDS complement(1044894..1045586)
/gene="torR"
/locus_tag="SF0998"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator TorR"
/protein_id="NP_706918.1"
/db_xref="GeneID:1023959"
/translation="MPHHIVIVEDKPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN
QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
PLELRELVVRVKNLLWRIDLARQAQPHTQDYCYRFAGYCLNVSRHTLERDGEPIKLTR
AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
HGEGYFLAADVC"
misc_feature complement(1044927..1045586)
/gene="torR"
/locus_tag="SF0998"
/note="two-component system response regulator TorR;
Region: PRK10766"
/db_xref="CDD:182711"
gene 1045673..1046845
/gene="torC"
/locus_tag="SF0997"
/db_xref="GeneID:1027565"
CDS 1045673..1046845
/gene="torC"
/locus_tag="SF0997"
/note="Code: C; COG: COG3005"
/codon_start=1
/transl_table=11
/product="trimethylamine N-oxide reductase cytochrome
c-type subunit"
/protein_id="NP_706919.2"
/db_xref="GeneID:1027565"
/translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST
TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ
TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHARQHPEAARQM
KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK
GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD
VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNECHG
APEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK"
misc_feature 1045673..1046842
/gene="torC"
/locus_tag="SF0997"
/note="pentaheme c-type cytochrome TorC; Region: PRK15032"
/db_xref="CDD:184992"
gene 1046845..1049385
/gene="torA"
/locus_tag="SF0999"
/pseudo
/db_xref="GeneID:1023986"
misc_feature 1046845..1049385
/gene="torA"
/locus_tag="SF0999"
/note="Similar to Escherichia coli K12 trimethylamine
N-oxide reductase subunit gi: 1787231 (849 aa). BLAST with
identity of 98% in 847 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
misc_feature 1049382..1050758
/note="Similar to Escherichia coli K12 part of
trimethylamine-N-oxide oxidoreductase gi: 1787232 (200
aa). BLAST with identity of 97% in 459 aa. This CDS has
been disrupted by insertion. The sequence has been checked
and is believed to be correct."
mobile_element complement(1049573..1050340)
/mobile_element_type="insertion sequence:IS1"
gene complement(1049588..1049983)
/gene="insB"
/locus_tag="SF1001"
/db_xref="GeneID:1023966"
CDS complement(1049588..1049983)
/gene="insB"
/locus_tag="SF1001"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_706920.1"
/db_xref="GeneID:1023966"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1049591..1049980)
/gene="insB"
/locus_tag="SF1001"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1050010..1050285)
/gene="insA"
/locus_tag="SF1002"
/db_xref="GeneID:1023979"
CDS complement(1050010..1050285)
/gene="insA"
/locus_tag="SF1002"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_706921.1"
/db_xref="GeneID:1023979"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPDTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1050013..1050264)
/gene="insA"
/locus_tag="SF1002"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(1050851..1051156)
/gene="yccD"
/locus_tag="SF1003"
/db_xref="GeneID:1023973"
CDS complement(1050851..1051156)
/gene="yccD"
/locus_tag="SF1003"
/codon_start=1
/transl_table=11
/product="chaperone-modulator protein CbpM"
/protein_id="NP_706922.2"
/db_xref="GeneID:1023973"
/translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
misc_feature complement(1050854..1051156)
/gene="yccD"
/locus_tag="SF1003"
/note="chaperone modulator CbpM; Region: PRK10265"
/db_xref="CDD:182346"
gene complement(1051156..1052076)
/gene="cbpA"
/locus_tag="SF1004"
/db_xref="GeneID:1023975"
CDS complement(1051156..1052076)
/gene="cbpA"
/locus_tag="SF1004"
/note="Code: O; COG: COG2214"
/codon_start=1
/transl_table=11
/product="curved DNA-binding protein CbpA"
/protein_id="NP_706923.1"
/db_xref="GeneID:1023975"
/translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF
GQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
PWEAALGTKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
PKPDENTAALWQQLADAQSSFDPRKDWGKA"
misc_feature complement(1051159..1052076)
/gene="cbpA"
/locus_tag="SF1004"
/note="curved DNA-binding protein; Region: PRK10266"
/db_xref="CDD:182347"
gene 1052337..1053593
/gene="yccE"
/locus_tag="SF1005"
/db_xref="GeneID:1023970"
CDS 1052337..1053593
/gene="yccE"
/locus_tag="SF1005"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706924.1"
/db_xref="GeneID:1023970"
/translation="MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVC
FMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRTLRTNDTQIYSGVSG
GITYTIQYVQDVDIVRVSLPGRGSESITDFKGYYWYGFMEYIENINACDDVFSEYCLD
NENMSIQPEQINMPGISDLDTGIDLSGISFIQSEINKTYGLKYAPVDGDGYCLLRAIL
VLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFYNLREDVKTLFGVDLQS
DNKIQGVGSFMSWSFLFFKKQFIDSCLNDKKCILHLPEFIFNDNKNLLALDTDTSDRI
KAVKNFLAVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLTNTGNHYDVYLPP
ELFSQAYKLKNKEMNAQLDYLNRYAT"
misc_feature 1052340..1053590
/gene="yccE"
/locus_tag="SF1005"
/note="YccE family protein; Region: PRK09784"
/db_xref="CDD:182074"
gene 1053886..1055127
/gene="agp"
/locus_tag="SF1006"
/db_xref="GeneID:1023971"
CDS 1053886..1055127
/gene="agp"
/locus_tag="SF1006"
/codon_start=1
/transl_table=11
/product="glucose-1-phosphatase/inositol phosphatase"
/protein_id="NP_706925.2"
/db_xref="GeneID:1023971"
/translation="MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRA
PLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGIVKSGECP
PPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPMITDDSAAF
SEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQE
PGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTS
PEVARNVAKPLVSYIDKALVTDRASAPKITVLVGHDSNIASLLTALDFKPYQLHDQNE
RTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCP
IDANGFCPMDKFDSVLNEAVK"
misc_feature 1053886..1055124
/gene="agp"
/locus_tag="SF1006"
/note="glucose-1-phosphatase/inositol phosphatase;
Provisional; Region: PRK10173"
/db_xref="CDD:182284"
misc_feature order(1054000..1054005,1054012..1054014,1054231..1054233,
1054816..1054821)
/gene="agp"
/locus_tag="SF1006"
/note="catalytic core [active]"
/db_xref="CDD:132717"
gene complement(1055165..1055392)
/gene="yccJ"
/locus_tag="SF1007"
/db_xref="GeneID:1023969"
CDS complement(1055165..1055392)
/gene="yccJ"
/locus_tag="SF1007"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706926.1"
/db_xref="GeneID:1023969"
/translation="MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWE
EGSDEVLVKAFAKTDKDSLFWGEQTIERKNV"
misc_feature complement(1055168..1055392)
/gene="yccJ"
/locus_tag="SF1007"
/note="hypothetical protein; Provisional; Region:
PRK10174"
/db_xref="CDD:182285"
gene complement(1055413..1056009)
/gene="wrbA"
/locus_tag="SF1008"
/db_xref="GeneID:1023965"
CDS complement(1055413..1056009)
/gene="wrbA"
/locus_tag="SF1008"
/note="Code: R; COG: COG0655"
/codon_start=1
/transl_table=11
/product="NAD(P)H:quinone oxidoreductase"
/protein_id="NP_706927.1"
/db_xref="GeneID:1023965"
/translation="MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMP
PQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGA
LYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPY
GATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG"
misc_feature complement(1055416..1056009)
/gene="wrbA"
/locus_tag="SF1008"
/note="NAD(P)H:quinone oxidoreductase; Provisional;
Region: PRK03767"
/db_xref="CDD:179647"
gene complement(1056571..1057965)
/gene="ycdG"
/locus_tag="SF1009"
/db_xref="GeneID:1023960"
CDS complement(1056571..1057965)
/gene="ycdG"
/locus_tag="SF1009"
/note="Code: F; COG: COG2233"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_706928.1"
/db_xref="GeneID:1023960"
/translation="MVRSQLSRADAPCLLTSLRRQLMAMFGFPHWQLKSTSTESGVVA
PDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRV
PSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWI
ERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQR
LLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSYAAWFGLPHFSTPGFNGQAMMLIAP
VAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIG
VMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGAR
IWVQNRVDLSQNANLIMVAVTFVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRR
LVDVPPPEVVHQEP"
misc_feature complement(1056613..1057899)
/gene="ycdG"
/locus_tag="SF1009"
/note="pyrimidine utilization transport protein G; Region:
RutG; TIGR03616"
/db_xref="CDD:132655"
gene complement(1057920..1058378)
/locus_tag="SF1010"
/db_xref="GeneID:1023968"
CDS complement(1057920..1058378)
/locus_tag="SF1010"
/note="Code: R; COG: COG1853"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706929.2"
/db_xref="GeneID:1023968"
/translation="MSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRG
ASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEAL
VSFDCRISQVVSVGTHDILFCAIEAIHRHTTPYGLVWFDRSYHALMRPAC"
misc_feature complement(1057938..1058378)
/locus_tag="SF1010"
/note="pyrimidine utilization flavin reductase protein F;
Region: RutF; TIGR03615"
/db_xref="CDD:132654"
gene complement(1058425..1059015)
/locus_tag="SF1011"
/db_xref="GeneID:1023955"
CDS complement(1058425..1059015)
/locus_tag="SF1011"
/note="Code: C; COG: COG0778"
/codon_start=1
/transl_table=11
/product="malonic semialdehyde reductase"
/protein_id="NP_706930.1"
/db_xref="GeneID:1023955"
/translation="MNEAVSPGALSTLFTDARTHNGWRETPVSDETLQELYALMKWGP
TSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFP
HGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFA
GSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL"
misc_feature complement(1058428..1059012)
/locus_tag="SF1011"
/note="malonic semialdehyde reductase; Provisional;
Region: PRK05365"
/db_xref="CDD:180040"
misc_feature complement(order(1058542..1058544,1058572..1058577,
1058611..1058616,1058623..1058628,1058635..1058640,
1058644..1058646,1058845..1058862,1058866..1058868,
1058872..1058874,1058878..1058880,1058884..1058889,
1058896..1058898,1058902..1058907,1058911..1058913,
1058965..1058967,1058971..1058973))
/locus_tag="SF1011"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:380323"
misc_feature complement(order(1058572..1058577,1058875..1058877,
1058953..1058955,1058959..1058961,1058965..1058967))
/locus_tag="SF1011"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:380323"
gene complement(1059025..1059825)
/locus_tag="SF1012"
/db_xref="GeneID:1023981"
CDS complement(1059025..1059825)
/locus_tag="SF1012"
/note="Code: R; COG: COG0596"
/codon_start=1
/transl_table=11
/product="acetyltransferase"
/protein_id="NP_706931.2"
/db_xref="GeneID:1023981"
/translation="MKLSLSSPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVC
YDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYP
ASVTMLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPR
LEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSS
ELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL"
misc_feature complement(1059079..1059822)
/locus_tag="SF1012"
/note="pyrimidine utilization protein D; Region: RutD;
TIGR03611"
/db_xref="CDD:211851"
gene complement(1059833..1060219)
/locus_tag="SF1013"
/db_xref="GeneID:1027563"
CDS complement(1059833..1060219)
/locus_tag="SF1013"
/note="Code: J; COG: COG0251"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706932.1"
/db_xref="GeneID:1027563"
/translation="MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLF
ADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKP
ARFYIQCGLVKPDALVEIATIAHIAK"
misc_feature complement(1059839..1060219)
/locus_tag="SF1013"
/note="YjgF, YER057c, and UK114 belong to a large family
of proteins present in bacteria, archaea, and eukaryotes
with no definitive function. The conserved domain is
similar in structure to chorismate mutase but there is no
sequence similarity and no...; Region:
YjgF_YER057c_UK114_family; cl10015"
/db_xref="CDD:447879"
misc_feature complement(order(1059851..1059853,1059857..1059859,
1059863..1059865,1059893..1059916,1059941..1059943,
1059950..1059952,1059983..1059985,1059989..1059991,
1059995..1060000,1060004..1060006,1060124..1060129,
1060133..1060135,1060139..1060141,1060148..1060150,
1060154..1060156,1060163..1060168))
/locus_tag="SF1013"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100004"
misc_feature complement(order(1059863..1059865,1059908..1059910,
1059950..1059952,1059962..1059964,1060166..1060168))
/locus_tag="SF1013"
/note="putative active site [active]"
/db_xref="CDD:100004"
gene complement(1060231..1060965)
/locus_tag="SF1014"
/db_xref="GeneID:1023952"
CDS complement(1060231..1060965)
/locus_tag="SF1014"
/note="Code: Q; COG: COG1335"
/codon_start=1
/transl_table=11
/product="synthetase"
/protein_id="NP_706933.1"
/db_xref="GeneID:1023952"
/translation="MPRPSLCADSGGGMMTTLTARPEAITFDPQQSAQIVVDMQNAYA
TPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPN
FHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDS
ILRSRGIRHLVFTGIATNVCVESTLRDGFFLEHFGVVLEDATHQAGPEFAQKAALFNI
ETFFGWVSDVETFCDALSPTSFARIA"
misc_feature complement(1060240..1060917)
/locus_tag="SF1014"
/note="pyrimidine utilization protein B; Region: RutB;
TIGR03614"
/db_xref="CDD:163356"
misc_feature complement(order(1060426..1060428,1060525..1060527,
1060852..1060854))
/locus_tag="SF1014"
/note="catalytic triad [active]"
/db_xref="CDD:238245"
misc_feature complement(1060438..1060443)
/locus_tag="SF1014"
/note="conserved cis-peptide bond [active]"
/db_xref="CDD:238245"
gene complement(1060923..1062071)
/locus_tag="SF1015"
/db_xref="GeneID:1023976"
CDS complement(1060923..1062071)
/locus_tag="SF1015"
/note="Code: C; COG: COG2141"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706934.2"
/db_xref="GeneID:1023976"
/translation="MQDAAPRLTFTLRDEERLMMKIGVFVPIGNNGWLISTHAPQYMP
TFELNKAIAQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQI
YATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRY
DYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSIPMKVICAGQSDAGMAFSAQ
YADFNFCFGKGVNTPTAFAPTAARMKQATEQTGRDVGSYVLFMVIADETDDATRAKWE
HYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARML
DEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLSALTQEVA"
misc_feature complement(1060950..1062014)
/locus_tag="SF1015"
/note="pyrimidine utilization protein A; Region: RutA;
TIGR03612"
/db_xref="CDD:163355"
misc_feature complement(order(1061289..1061291,1061295..1061297,
1061400..1061402,1061442..1061447,1061595..1061597,
1061664..1061666,1061823..1061825,1061985..1061987,
1061997..1061999))
/locus_tag="SF1015"
/note="active site"
/db_xref="CDD:238527"
misc_feature complement(order(1061493..1061498,1061502..1061513,
1061634..1061639,1061646..1061648,1061697..1061699,
1061706..1061708,1061715..1061720,1061727..1061732,
1061736..1061738,1061787..1061789,1061796..1061801,
1061808..1061810,1061817..1061834))
/locus_tag="SF1015"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238527"
misc_feature complement(1061754..1061759)
/locus_tag="SF1015"
/note="non-prolyl cis peptide bond [active]"
/db_xref="CDD:238527"
misc_feature complement(order(1061241..1061258,1061277..1061288,
1061478..1061516,1061598..1061600,1061610..1061615,
1061634..1061660))
/locus_tag="SF1015"
/note="insertion regions; other site"
/db_xref="CDD:238527"
gene 1062302..1062940
/gene="ycdC"
/locus_tag="SF1016"
/db_xref="GeneID:1024012"
CDS 1062302..1062940
/gene="ycdC"
/locus_tag="SF1016"
/note="Code: K; COG: COG1309"
/codon_start=1
/transl_table=11
/product="HTH-type transcriptional regulator RutR"
/protein_id="NP_706935.1"
/db_xref="GeneID:1024012"
/translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI
AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ
HLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR"
misc_feature 1062302..1062937
/gene="ycdC"
/locus_tag="SF1016"
/note="HTH-type transcriptional regulator RutR;
Provisional; Region: PRK15008"
/db_xref="CDD:184970"
mobile_element complement(1063047..1064875)
/mobile_element_type="insertion sequence:IS91"
gene complement(1063235..1064422)
/locus_tag="SF1017"
/db_xref="GeneID:1023961"
CDS complement(1063235..1064422)
/locus_tag="SF1017"
/codon_start=1
/transl_table=11
/product="insertion sequence IS91 transposase"
/protein_id="NP_706936.1"
/db_xref="GeneID:1023961"
/translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVF
TLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI
HLSTTAGGVTSGHTWKNLYFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKR
EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLR
YNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPAKRRLLEEVVYIITE
TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
WCG"
misc_feature complement(1063295..1064410)
/locus_tag="SF1017"
/note="IS91 family transposase; Region: transpos_IS91;
NF033538"
/db_xref="CDD:468069"
gene complement(1064422..1064844)
/locus_tag="SF1018"
/db_xref="GeneID:1026246"
CDS complement(1064422..1064844)
/locus_tag="SF1018"
/codon_start=1
/transl_table=11
/product="insertion sequence IS91 protein"
/protein_id="NP_706937.1"
/db_xref="GeneID:1026246"
/translation="MVCNYRYKNRQCHCLSGGYMARSAKPRKRKPASQRSKLPRYVVK
LHEDDFFDEEDAEVLRFDSFDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEI
ARCTEREFATILAGISAGGMYCPECGTVHWPDGVAPPF"
gene 1064943..1065551
/locus_tag="SF1019"
/db_xref="GeneID:1023989"
CDS 1064943..1065551
/locus_tag="SF1019"
/note="Code: P; COG: COG0672"
/codon_start=1
/transl_table=11
/product="cytochrome"
/protein_id="NP_706938.1"
/db_xref="GeneID:1023989"
/translation="MAVIAVVILTWMVFWMRKVSRNVKVQLEQAVDSALQRGNHHGWA
LVMMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLN
LGAFFKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFDMSAVLSTHSLFGTLME
GIFGYQEAPSVSEVAVWFIYLIPALVAFALPPRAGATASRSA"
misc_feature <1064946..1065542
/locus_tag="SF1019"
/note="Iron permease FTR1 family; Region: FTR1; cl00475"
/db_xref="CDD:469785"
gene 1065609..1066736
/gene="ycdO"
/locus_tag="SF1020"
/db_xref="GeneID:1023982"
CDS 1065609..1066736
/gene="ycdO"
/locus_tag="SF1020"
/note="Code: P; COG: COG2822"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706939.1"
/db_xref="GeneID:1023982"
/translation="MTINFRRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM
TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT
CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA
IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR
LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI
SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY
RTKDGFETYDKLTDADRNALKGPITALAEDLAQLRGVLGLD"
misc_feature 1065609..1066733
/gene="ycdO"
/locus_tag="SF1020"
/note="inactive ferrous ion transporter periplasmic
protein EfeO; Provisional; Region: PRK10378"
/db_xref="CDD:236677"
gene 1066742..1068007
/gene="ycdB"
/locus_tag="SF1021"
/db_xref="GeneID:1026238"
CDS 1066742..1068007
/gene="ycdB"
/locus_tag="SF1021"
/note="Code: P; COG: COG2837"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706940.1"
/db_xref="GeneID:1026238"
/translation="MQYKDENGVNEPSRRRLLKGIGALAGSCPVAHAQKTQSAPGTLS
PDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLSQG
GAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTR
FPNDSLDAALCHGDVLLQICANTQDTVNHALRDIIKHTPDLLSVRWKREGFISDHAAR
SKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFR
VEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPR
TAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEY
VKPIGGGYFFSLPGVKDANDYLGRALLQV"
misc_feature 1066754..1067998
/gene="ycdB"
/locus_tag="SF1021"
/note="Tat-translocated enzyme; Region: tat_substr_1;
TIGR01412"
/db_xref="CDD:273606"
gene 1068479..1069402
/locus_tag="SF1022"
/db_xref="GeneID:1023996"
CDS 1068479..1069402
/locus_tag="SF1022"
/note="Code: T; COG: COG1702"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706941.1"
/db_xref="GeneID:1023996"
/translation="MRSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVL
SMGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARDSRDTSPI
LARNEAQLHYLQAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQ
ADEDLGFLPGDIAEKFAPYFRPVYDLLVRRLGASFMQYCLRPEIGKVETAPFAYMRGR
TFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALER
FEEDEMVGIVRFGKEDCVRSALCQRTLHAYS"
misc_feature 1068614..1069399
/locus_tag="SF1022"
/note="phosphate starvation-inducible protein PhoH;
Region: PRK10536"
/db_xref="CDD:182529"
mobile_element complement(1069482..1070739)
/mobile_element_type="insertion sequence:IS3"
gene complement(1069512..1070378)
/locus_tag="SF1023"
/db_xref="GeneID:1024003"
CDS complement(1069512..1070378)
/locus_tag="SF1023"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3A transposase InsF"
/protein_id="NP_706942.1"
/db_xref="GeneID:1024003"
/translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ
FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF
SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM
SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG
LSPEQFENQNLA"
misc_feature complement(1069530..>1070378)
/locus_tag="SF1023"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1070375..1070683)
/locus_tag="SF1024"
/db_xref="GeneID:1023962"
CDS complement(1070375..1070683)
/locus_tag="SF1024"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3 transposase InsE"
/protein_id="NP_706943.1"
/db_xref="GeneID:1023962"
/translation="MTYMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSL
YESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK
"
misc_feature complement(1070393..1070650)
/locus_tag="SF1024"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1070945..1071269
/locus_tag="SF1025"
/pseudo
/db_xref="GeneID:1023957"
misc_feature 1070945..1071269
/locus_tag="SF1025"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787266 (108 aa). BLAST with
identity of 99% in 108 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 1071266..1072252
/gene="ycdU"
/locus_tag="SF1026"
/db_xref="GeneID:1024001"
CDS 1071266..1072252
/gene="ycdU"
/locus_tag="SF1026"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706944.1"
/db_xref="GeneID:1024001"
/translation="MIPDYLTFIRFQDKRNLIYIYAIGLILIGFYWKNAGFTFPSEDI
GVVSGILALVLYNFIFDLKAYWAYKCVTKNIDFSWFKKKQNHKIELFLTQPLVAGFLS
LIMLSAMSWGLYQLLPSLYALFLISLLGPLVIFLLFRMIRTSYVKQVAISVAKKVKYK
SLTRYVLLSVCISTVVNLLTISPLRNSDSFVTEGQWLTFKSIIALLILCGVVLAINLF
FLRFSKRPAFLGRFFLQEIDLFFSSENTLSTFFAKPLWLRLFILRVIEMMWITLVSVL
ATLVEWRIWFEAYFLLCYVPCLIYYFFHCRFLWHNDFMMACDMYFRWGHFNK"
gene complement(1072445..1072532)
/locus_tag="SF4465"
/db_xref="GeneID:3161768"
tRNA complement(1072445..1072532)
/locus_tag="SF4465"
/product="tRNA-Ser"
/codon_recognized="UCC"
/db_xref="GeneID:3161768"
gene 1072728..1073705
/gene="ycdW"
/locus_tag="SF1027"
/pseudo
/db_xref="GeneID:1023964"
misc_feature 1072728..1073705
/gene="ycdW"
/locus_tag="SF1027"
/note="Similar to Escherichia coli K12 dehydrogenase gi:
1787270 (326 aa). BLAST with identity of 99% in 326 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 1073760..1074497
/gene="ycdX"
/locus_tag="SF1028"
/db_xref="GeneID:1024000"
CDS 1073760..1074497
/gene="ycdX"
/locus_tag="SF1028"
/note="Code: ER; COG: COG1387"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="NP_706945.1"
/db_xref="GeneID:1024000"
/translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
PVFAPHDKATNTQAMISTIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPLER
ILNVSPRRLLNFLESRGMAPIAEFADL"
misc_feature 1073760..1074494
/gene="ycdX"
/locus_tag="SF1028"
/note="putative hydrolase; Validated; Region: PRK09248"
/db_xref="CDD:236429"
gene 1074521..1075075
/gene="ycdY"
/locus_tag="SF1029"
/db_xref="GeneID:1023985"
CDS 1074521..1075075
/gene="ycdY"
/locus_tag="SF1029"
/note="Code: R; COG: COG3381"
/codon_start=1
/transl_table=11
/product="oxidoreductase subunit"
/protein_id="NP_706946.1"
/db_xref="GeneID:1023985"
/translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
DELLTRLQKSCDMTQVSADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMLL
ADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
RTMAPLTRDAISAMWDELEEDSEE"
misc_feature 1074521..1075072
/gene="ycdY"
/locus_tag="SF1029"
/note="Cytoplasmic chaperone TorD involved in
molybdoenzyme TorA maturation [Posttranslational
modification, protein turnover, chaperones]; Region: TorD;
COG3381"
/db_xref="CDD:442608"
gene 1075147..1075668
/gene="ycdZ"
/locus_tag="SF1030"
/db_xref="GeneID:1024002"
CDS 1075147..1075668
/gene="ycdZ"
/locus_tag="SF1030"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706947.2"
/db_xref="GeneID:1024002"
/translation="MAAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFL
GCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLM
CIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSA
KTAHREQEIKNKA"
misc_feature 1075204..1075602
/gene="ycdZ"
/locus_tag="SF1030"
/note="Protein of unknown function (DUF1097); Region:
DUF1097; pfam06496"
/db_xref="CDD:428977"
gene complement(1075732..1076507)
/gene="csgG"
/locus_tag="SF1031"
/pseudo
/db_xref="GeneID:1023995"
misc_feature complement(1075732..1076507)
/gene="csgG"
/locus_tag="SF1031"
/note="'Similar to Escherichia coli K12 curli production
assembly/transport component, 2nd curli operon gi: 1787274
(278 aa). BLAST with identity of 97% in 257 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct.'"
/pseudo
mobile_element complement(1076759..1078087)
/mobile_element_type="insertion sequence:iso-IS10R"
gene complement(1076772..1077980)
/locus_tag="SF1032"
/db_xref="GeneID:1023997"
CDS complement(1076772..1077980)
/locus_tag="SF1032"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_706948.1"
/db_xref="GeneID:1023997"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature complement(1076811..1077866)
/locus_tag="SF1032"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene complement(1078313..1078702)
/gene="csgE"
/locus_tag="SF1033"
/db_xref="GeneID:1027566"
CDS complement(1078313..1078702)
/gene="csgE"
/locus_tag="SF1033"
/codon_start=1
/transl_table=11
/product="curli assembly protein CsgE"
/protein_id="NP_706949.1"
/db_xref="GeneID:1027566"
/translation="MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFY
RAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDSEKTVVFAL
IQTEEALNRRQINQALLSTDDLAHDEF"
misc_feature complement(1078316..1078702)
/gene="csgE"
/locus_tag="SF1033"
/note="curli production assembly/transport protein CsgE;
Region: PRK10386"
/db_xref="CDD:236678"
gene complement(1078707..1079357)
/gene="csgD"
/locus_tag="SF1034"
/db_xref="GeneID:1023998"
CDS complement(1078707..1079357)
/gene="csgD"
/locus_tag="SF1034"
/note="Code: K; COG: COG2771"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator CsgD"
/protein_id="NP_706950.2"
/db_xref="GeneID:1023998"
/translation="MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQ
RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWP
HINGVFYAMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE
KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR"
misc_feature complement(1078710..1079357)
/gene="csgD"
/locus_tag="SF1034"
/note="transcriptional regulator CsgD; Region: PRK10100"
/db_xref="CDD:182241"
gene 1080111..1080566
/gene="csgB"
/locus_tag="SF1035"
/db_xref="GeneID:1023983"
CDS 1080111..1080566
/gene="csgB"
/locus_tag="SF1035"
/codon_start=1
/transl_table=11
/product="curlin minor subunit CsgB"
/protein_id="NP_706951.2"
/db_xref="GeneID:1023983"
/translation="MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFN
QAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDA
SISQGAYGNTAMIIQKGSGNKANITQYGTQKTAVVVQRQSQMAIRVTQR"
misc_feature 1080111..1080563
/gene="csgB"
/locus_tag="SF1035"
/note="curlin minor subunit CsgB; Provisional; Region:
csgB; PRK10101"
/db_xref="CDD:182242"
misc_feature 1080607..1082203
/note="'Similar to Escherichia coli K12 curlin major
subunit, coiled surface structures; cryptic gi: 1787279
(152 aa). BLAST with identity of 98% in 532 aa. This CDS
has been disrupted by insertion. The sequence has been
checked and is believed to be correct.'"
mobile_element 1080716..1081766
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 1080780..1081082
/locus_tag="SF1037"
/db_xref="GeneID:1023977"
CDS 1080780..1081082
/locus_tag="SF1037"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706952.1"
/db_xref="GeneID:1023977"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATVYFAQESLKNTR"
misc_feature 1080780..1081052
/locus_tag="SF1037"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 1081758..1081857
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 1082266..1082598
/gene="csgC"
/locus_tag="SF1039"
/db_xref="GeneID:1023978"
CDS 1082266..1082598
/gene="csgC"
/locus_tag="SF1039"
/codon_start=1
/transl_table=11
/product="curli assembly protein CsgC"
/protein_id="NP_706954.2"
/db_xref="GeneID:1023978"
/translation="MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQIL
SLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPEDRVKIVVTVSDGQALHLSQQ
WTPSSEKS"
misc_feature 1082266..1082595
/gene="csgC"
/locus_tag="SF1039"
/note="curli assembly protein CsgC; Provisional; Region:
csgC; PRK10102"
/db_xref="CDD:182243"
gene 1082719..1083030
/locus_tag="SF1040"
/db_xref="GeneID:1023992"
CDS 1082719..1083030
/locus_tag="SF1040"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706955.1"
/db_xref="GeneID:1023992"
/translation="MFRPFLDSLMLGSLFFPFIAIAGSTAQGGVIHFYGQIVEPACDV
STQSSPVEMNCPQNGSIPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEY
N"
misc_feature 1082743..>1082880
/locus_tag="SF1040"
/note="Pilin (type 1 fimbrial protein) [Cell motility];
Region: FimA; COG3539"
/db_xref="CDD:442760"
gene 1083125..1083658
/locus_tag="SF1041"
/db_xref="GeneID:1023972"
CDS 1083125..1083658
/locus_tag="SF1041"
/note="Code: S; COG: COG2110"
/codon_start=1
/transl_table=11
/product="RNase III inhibitor"
/protein_id="NP_706956.1"
/db_xref="GeneID:1023972"
/translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL
NSLRLVAANSYTSVAFPAISTGVYSYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
EENAHLYERLLTQQGDE"
misc_feature 1083125..1083655
/locus_tag="SF1041"
/note="ADP-ribose-binding protein; Region: PRK00431"
/db_xref="CDD:234759"
misc_feature order(1083152..1083160,1083191..1083199,1083212..1083229,
1083233..1083235,1083242..1083244,1083371..1083373,
1083377..1083379,1083479..1083502,1083593..1083595,
1083599..1083604,1083611..1083613)
/locus_tag="SF1041"
/note="active site"
/db_xref="CDD:438955"
gene 1083600..1085081
/gene="ymdC"
/locus_tag="SF1042"
/db_xref="GeneID:1024018"
CDS 1083600..1085081
/gene="ymdC"
/locus_tag="SF1042"
/note="Code: I; COG: COG1502"
/codon_start=1
/transl_table=11
/product="synthase"
/protein_id="NP_706957.2"
/db_xref="GeneID:1024018"
/translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDN
NTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
PEGEMADRIELPASWHNDAMTHRYLRKMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
WGRINWVDRHAKKEVILKKEPATSFWKRVMVRLASILPVEWLL"
misc_feature 1083729..1084211
/gene="ymdC"
/locus_tag="SF1042"
/note="Putative catalytic domain, repeat 1, of Escherichia
coli uncharacterized protein ymdC and similar proteins;
Region: PLDc_ymdC_like_1; cd09111"
/db_xref="CDD:197210"
misc_feature order(1084047..1084049,1084053..1084055,1084092..1084094,
1084098..1084100,1084146..1084148)
/gene="ymdC"
/locus_tag="SF1042"
/note="putative active site [active]"
/db_xref="CDD:197210"
misc_feature 1084047..1084049
/gene="ymdC"
/locus_tag="SF1042"
/note="catalytic site [active]"
/db_xref="CDD:197210"
misc_feature 1084407..1085066
/gene="ymdC"
/locus_tag="SF1042"
/note="Putative catalytic domain, repeat 2, of Escherichia
coli uncharacterized protein ymdC and similar proteins;
Region: PLDc_ymdC_like_2; cd09113"
/db_xref="CDD:197212"
misc_feature order(1084764..1084766,1084770..1084772,1084809..1084811,
1084815..1084817,1084848..1084850)
/gene="ymdC"
/locus_tag="SF1042"
/note="putative active site [active]"
/db_xref="CDD:197212"
misc_feature 1084764..1084766
/gene="ymdC"
/locus_tag="SF1042"
/note="catalytic site [active]"
/db_xref="CDD:197212"
gene complement(1085089..1086246)
/gene="mdoC"
/locus_tag="SF1043"
/db_xref="GeneID:1023988"
CDS complement(1085089..1086246)
/gene="mdoC"
/locus_tag="SF1043"
/codon_start=1
/transl_table=11
/product="glucans biosynthesis protein"
/protein_id="NP_706958.2"
/db_xref="GeneID:1023988"
/translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
SLWLTLFNDFIHSFRMQVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
misc_feature complement(1085128..1086246)
/gene="mdoC"
/locus_tag="SF1043"
/note="glucans biosynthesis protein MdoC; Region: opgC;
PRK03854"
/db_xref="CDD:235167"
gene 1086640..1088175
/gene="mdoG"
/locus_tag="SF1044"
/db_xref="GeneID:1023993"
CDS 1086640..1088175
/gene="mdoG"
/locus_tag="SF1044"
/note="Code: P; COG: COG3131"
/codon_start=1
/transl_table=11
/product="glucan biosynthesis protein G"
/protein_id="NP_706959.2"
/db_xref="GeneID:1023993"
/translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPK
SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
KFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNG
LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPRGFGLLQRGRDFSRFEDLDDRYDLRPS
AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKITEMRAALVNADQTLSETWSYQLP
ANE"
misc_feature 1086640..1088169
/gene="mdoG"
/locus_tag="SF1044"
/note="glucan biosynthesis protein G; Provisional; Region:
mdoG; PRK13274"
/db_xref="CDD:237328"
gene 1088168..1090711
/gene="mdoH"
/locus_tag="SF1045"
/db_xref="GeneID:1023984"
CDS 1088168..1090711
/gene="mdoH"
/locus_tag="SF1045"
/note="Code: M; COG: COG2943"
/codon_start=1
/transl_table=11
/product="glucosyltransferase MdoH"
/protein_id="NP_706960.2"
/db_xref="GeneID:1023984"
/translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED
DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
WLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
misc_feature 1088549..1090615
/gene="mdoH"
/locus_tag="SF1045"
/note="Membrane glycosyltransferase [Cell
wall/membrane/envelope biogenesis, Carbohydrate transport
and metabolism]; Region: MdoH; COG2943"
/db_xref="CDD:442186"
mobile_element complement(1090939..1092767)
/mobile_element_type="insertion sequence:IS91"
gene complement(1091127..1092314)
/locus_tag="SF1046"
/db_xref="GeneID:1026252"
CDS complement(1091127..1092314)
/locus_tag="SF1046"
/codon_start=1
/transl_table=11
/product="insertion sequence IS91 transposase"
/protein_id="NP_706961.1"
/db_xref="GeneID:1026252"
/translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVF
TLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI
HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPYLVMPDALAAEGSSKR
EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLR
YNSHRTKREEYLLMSGDESMERFSWHVADKGFRMVRYYVFLSPAKRRLLEEVVYIITE
TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
WCG"
misc_feature complement(1091187..1092302)
/locus_tag="SF1046"
/note="IS91 family transposase; Region: transpos_IS91;
NF033538"
/db_xref="CDD:468069"
gene complement(1092314..1092736)
/locus_tag="SF1048"
/db_xref="GeneID:1024027"
CDS complement(1092314..1092736)
/locus_tag="SF1048"
/codon_start=1
/transl_table=11
/product="insertion sequence IS91 protein"
/protein_id="NP_706962.1"
/db_xref="GeneID:1024027"
/translation="MVCNYRYKNRQCHCLSGGYMARSAKPRKRKPASQRSKLPRYVVK
LHEDDFFDEEDAEVLRFDSFDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEI
ARCTEREFATILAGISAGGMYCPECGTVHWPDGVAPPF"
gene 1092698..1094307
/locus_tag="SF1047"
/pseudogene="unknown"
/db_xref="GeneID:1024033"
mobile_element complement(1094369..1095674)
/mobile_element_type="insertion sequence:IS629"
gene complement(1094411..1095294)
/locus_tag="SF1049"
/pseudogene="unknown"
/db_xref="GeneID:1024034"
gene complement(1095294..1095620)
/locus_tag="SF1050"
/db_xref="GeneID:1023387"
CDS complement(1095294..1095620)
/locus_tag="SF1050"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706965.1"
/db_xref="GeneID:1023387"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature complement(1095330..1095617)
/locus_tag="SF1050"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 1095980..1097228
/mobile_element_type="insertion sequence:IS911"
gene 1096016..1096354
/locus_tag="SF1051"
/db_xref="GeneID:1024023"
CDS 1096016..1096354
/locus_tag="SF1051"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_706966.1"
/db_xref="GeneID:1024023"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature 1096055..1096324
/locus_tag="SF1051"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1096381..1097220
/locus_tag="SF1052"
/db_xref="GeneID:1023991"
CDS 1096381..1097220
/locus_tag="SF1052"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_706967.1"
/db_xref="GeneID:1023991"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSEQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature 1096402..1097211
/locus_tag="SF1052"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(1097226..1097729)
/locus_tag="SF1053"
/db_xref="GeneID:1023987"
CDS complement(1097226..1097729)
/locus_tag="SF1053"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706968.1"
/db_xref="GeneID:1023987"
/translation="MSGDSGGQSSESGSTLISRDNKLVENFIDTLENWRDQKQIISVI
CKDGIKIDDSIITSFKASKDVGISNGLRIQLTFQEINFKAIVGQTDVSAATGRTSTTN
DGGATSKKNTGNTTTSLGSPMLTCKELFSYSASELSDEALKARVTCSKSVSVKNGEST
FTASANE"
mobile_element 1097702..1099032
/mobile_element_type="insertion sequence:IS2"
gene 1097748..1098158
/locus_tag="SF1054"
/db_xref="GeneID:1024026"
CDS 1097748..1098158
/locus_tag="SF1054"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_706969.3"
/db_xref="GeneID:1024026"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 1097793..1098155
/locus_tag="SF1054"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 1098116..1099021
/locus_tag="SF1055"
/db_xref="GeneID:1024016"
CDS 1098116..1099021
/locus_tag="SF1055"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_706970.1"
/db_xref="GeneID:1024016"
/translation="MDSARALIARGWGVSLVSRCLRVSRAHVHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature 1098116..1099018
/locus_tag="SF1055"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
mobile_element 1099363..1100668
/mobile_element_type="insertion sequence:IS629"
gene 1099417..1099743
/locus_tag="SF1056"
/db_xref="GeneID:1026720"
CDS 1099417..1099743
/locus_tag="SF1056"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_706971.1"
/db_xref="GeneID:1026720"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWVRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature 1099420..1099707
/locus_tag="SF1056"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1099743..1100626
/locus_tag="SF1057"
/pseudogene="unknown"
/db_xref="GeneID:1024029"
mobile_element 1100850..1102113
/mobile_element_type="insertion sequence:IS600"
gene 1100914..1101216
/locus_tag="SF1058"
/db_xref="GeneID:1023980"
CDS 1100914..1101216
/locus_tag="SF1058"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_706973.1"
/db_xref="GeneID:1023980"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 1100914..1101186
/locus_tag="SF1058"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1101252..1102070
/locus_tag="SF1059"
/db_xref="GeneID:1024008"
CDS 1101252..1102070
/locus_tag="SF1059"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_706974.1"
/db_xref="GeneID:1024008"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature <1101252..1102043
/locus_tag="SF1059"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1102095..1103027)
/locus_tag="SF1060"
/db_xref="GeneID:1024020"
CDS complement(1102095..1103027)
/locus_tag="SF1060"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_706975.2"
/db_xref="GeneID:1024020"
/translation="MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSL
SFKDLGKSAFSGKHLKGGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLR
RILRAGVDVVTLSDGEHYTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRKK
ELISEGIKVSRRCPAWLRLNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLND
EGHLSLNQYTPKQKGWSDTAVKKLLRNRAVIGCFTPAGREEVQGYYPAIISESLFYRV
QQLNTGQYGRASVSSNPLSVNLFRGIIKCEVYWQ"
misc_feature complement(<1102278..1103027)
/locus_tag="SF1060"
/note="Site-specific DNA recombinase SpoIVCA/DNA invertase
PinE [Replication, recombination and repair]; Region:
SpoIVCA; COG1961"
/db_xref="CDD:441564"
gene complement(1103420..1104340)
/gene="htrB"
/locus_tag="SF1061"
/db_xref="GeneID:1024013"
CDS complement(1103420..1104340)
/gene="htrB"
/locus_tag="SF1061"
/note="Code: N; COG: COG1560"
/codon_start=1
/transl_table=11
/product="lipid A biosynthesis lauroyl acyltransferase"
/protein_id="NP_706976.2"
/db_xref="GeneID:1024013"
/translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPIIYRLGCGL
GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL
IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
misc_feature complement(1103423..1104340)
/gene="htrB"
/locus_tag="SF1061"
/note="lipid A biosynthesis lauroyl acyltransferase;
Provisional; Region: PRK06860"
/db_xref="CDD:235880"
misc_feature complement(order(1103732..1103740,1103873..1103884,
1103930..1103932,1103936..1103938,1103945..1103947))
/gene="htrB"
/locus_tag="SF1061"
/note="putative acyl-acceptor binding pocket [active]"
/db_xref="CDD:153246"
gene 1104565..1105617
/gene="yceA"
/locus_tag="SF1062"
/db_xref="GeneID:1026260"
CDS 1104565..1105617
/gene="yceA"
/locus_tag="SF1062"
/note="Code: R; COG: COG1054"
/codon_start=1
/transl_table=11
/product="rhodanese-related sulfurtransferase"
/protein_id="NP_706977.2"
/db_xref="GeneID:1026260"
/translation="MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDA
LYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDD
GKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYE
YEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGF
NKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDS
HTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNK
SRGRLNTTLGIPDPTE"
misc_feature 1104625..1105575
/gene="yceA"
/locus_tag="SF1062"
/note="rhodanese-related sulfurtransferase; Region:
PRK00142"
/db_xref="CDD:234663"
misc_feature 1105162..1105164
/gene="yceA"
/locus_tag="SF1062"
/note="active site residue [active]"
/db_xref="CDD:238776"
gene complement(1105659..1106234)
/gene="yceI"
/locus_tag="SF1063"
/db_xref="GeneID:1024015"
CDS complement(1105659..1106234)
/gene="yceI"
/locus_tag="SF1063"
/note="Code: S; COG: COG2353"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706978.1"
/db_xref="GeneID:1024015"
/translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG
YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTTKY
PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK
IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
misc_feature complement(1105665..1106234)
/gene="yceI"
/locus_tag="SF1063"
/note="YceI family protein; Region: PRK03757"
/db_xref="CDD:179642"
gene complement(1106238..1106804)
/locus_tag="SF1064"
/db_xref="GeneID:1024007"
CDS complement(1106238..1106804)
/locus_tag="SF1064"
/note="Code: C; COG: COG3038"
/codon_start=1
/transl_table=11
/product="cytochrome"
/protein_id="NP_706979.2"
/db_xref="GeneID:1024007"
/translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGW
YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALCLLLF
AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
FMALKHHFIDKDDTLKRMLGKSSSDYGV"
misc_feature complement(1106265..1106804)
/locus_tag="SF1064"
/note="Cytochrome b561 [Energy production and conversion];
Region: CybB; COG3038"
/db_xref="CDD:442272"
gene complement(1107065..1107178)
/gene="yceO"
/locus_tag="SF1065"
/db_xref="GeneID:1024048"
CDS complement(1107065..1107178)
/gene="yceO"
/locus_tag="SF1065"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706980.2"
/db_xref="GeneID:1024048"
/translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
misc_feature complement(1107071..1107178)
/gene="yceO"
/locus_tag="SF1065"
/note="Protein of unknown function (DUF2770); Region:
DUF2770; pfam10968"
/db_xref="CDD:431565"
gene complement(1107226..1108344)
/gene="solA"
/locus_tag="SF1066"
/db_xref="GeneID:1024010"
CDS complement(1107226..1108344)
/gene="solA"
/locus_tag="SF1066"
/note="Code: E; COG: COG0665"
/codon_start=1
/transl_table=11
/product="N-methyltryptophan oxidase"
/protein_id="NP_706981.1"
/db_xref="GeneID:1024010"
/translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLAN
VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
EAGCAQLFNCPVTAIRHDDDGVTIETVDGEYQAKKAIVCAGTWVKDLLPELPVQPVRK
VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
PFAEVASDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
LSGHGFKFASVLGEIAADFAQDQKSDFDLTPFRLSRFQ"
misc_feature complement(1107229..1108344)
/gene="solA"
/locus_tag="SF1066"
/note="N-methyl-L-tryptophan oxidase; Region: solA;
PRK11259"
/db_xref="CDD:236887"
gene complement(1109003..1109248)
/gene="dinI"
/locus_tag="SF1067"
/db_xref="GeneID:1024017"
CDS complement(1109003..1109248)
/gene="dinI"
/locus_tag="SF1067"
/codon_start=1
/transl_table=11
/product="DNA damage-inducible protein I"
/protein_id="NP_706982.2"
/db_xref="GeneID:1024017"
/translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
AAANNLSVIGATKEDKQRISEILQETWESADDWFVSE"
misc_feature complement(1109006..1109248)
/gene="dinI"
/locus_tag="SF1067"
/note="DNA damage-inducible protein I; Provisional;
Region: PRK10597"
/db_xref="CDD:182578"
gene complement(1109322..1110368)
/gene="pyrC"
/locus_tag="SF1068"
/db_xref="GeneID:1024025"
CDS complement(1109322..1110368)
/gene="pyrC"
/locus_tag="SF1068"
/note="Code: F; COG: COG0418"
/codon_start=1
/transl_table=11
/product="dihydroorotase"
/protein_id="NP_706983.1"
/db_xref="GeneID:1024025"
/translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMP
NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEAVFTAA
KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIES
VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP
HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
PFLAGETVRWSVKQ"
misc_feature complement(1109328..1110353)
/gene="pyrC"
/locus_tag="SF1068"
/note="Dihydroorotase [Nucleotide transport and
metabolism]; Region: PyrC; COG0418"
/db_xref="CDD:440187"
gene complement(1110474..1111034)
/gene="yceB"
/locus_tag="SF1069"
/db_xref="GeneID:1024009"
CDS complement(1110474..1111034)
/gene="yceB"
/locus_tag="SF1069"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_706984.2"
/db_xref="GeneID:1024009"
/translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK
DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
QGEAMAKKLAKGIEVKPGEIVIPFTD"
misc_feature complement(1110477..1111034)
/gene="yceB"
/locus_tag="SF1069"
/note="lipoprotein; Provisional; Region: PRK10598"
/db_xref="CDD:182579"
gene complement(1111168..1111815)
/gene="grxB"
/locus_tag="SF1070"
/db_xref="GeneID:1024019"
CDS complement(1111168..1111815)
/gene="grxB"
/locus_tag="SF1070"
/note="Code: O; COG: COG2999"
/codon_start=1
/transl_table=11
/product="glutaredoxin"
/protein_id="NP_706985.1"
/db_xref="GeneID:1024019"
/translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYVNKLLL
PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVANYRDNMAKQTQINLLSSMAI"
misc_feature complement(1111186..1111815)
/gene="grxB"
/locus_tag="SF1070"
/note="glutaredoxin 2; Provisional; Region: PRK10387"
/db_xref="CDD:236679"
gene complement(1111879..1113087)
/gene="yceL"
/locus_tag="SF1071"
/db_xref="GeneID:1024021"
CDS complement(1111879..1113087)
/gene="yceL"
/locus_tag="SF1071"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein MdtH"
/protein_id="NP_706986.2"
/db_xref="GeneID:1024021"
/translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSASAVIGALLGSWLLQ
YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR
LMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY
MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR
AARRLLERDA"
misc_feature complement(1111888..1113087)
/gene="yceL"
/locus_tag="SF1071"
/note="multidrug efflux MFS transporter MdtH; Region:
PRK11646"
/db_xref="CDD:183255"
gene 1113323..1113907
/gene="rimJ"
/locus_tag="SF1072"
/db_xref="GeneID:1024014"
CDS 1113323..1113907
/gene="rimJ"
/locus_tag="SF1072"
/note="Code: J; COG: COG1670"
/codon_start=1
/transl_table=11
/product="ribosomal-protein-S5-alanine
N-acetyltransferase"
/protein_id="NP_706987.1"
/db_xref="GeneID:1024014"
/translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
misc_feature 1113323..1113904
/gene="rimJ"
/locus_tag="SF1072"
/note="30S ribosomal protein S5 alanine
N-acetyltransferase; Region: PRK10809"
/db_xref="CDD:182749"
gene 1113918..1114565
/gene="yceH"
/locus_tag="SF1073"
/db_xref="GeneID:1024004"
CDS 1113918..1114565
/gene="yceH"
/locus_tag="SF1073"
/note="Code: S; COG: COG3132"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_706988.1"
/db_xref="GeneID:1024004"
/translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
ITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE
SRYMHLFSGEVEDQPAVTAMSNMVDGDLQTRVEALEIEVAELKQRLDSLLAHLGD"
misc_feature 1113918..1114562
/gene="yceH"
/locus_tag="SF1073"
/note="hypothetical protein; Provisional; Region:
PRK11239"
/db_xref="CDD:183048"
gene 1114567..1115400
/locus_tag="SF1074"
/pseudogene="unknown"
/db_xref="GeneID:1024044"
gene 1115600..1117135
/gene="mviN"
/locus_tag="SF1075"
/db_xref="GeneID:1024011"
CDS 1115600..1117135
/gene="mviN"
/locus_tag="SF1075"
/note="Code: R; COG: COG0728"
/codon_start=1
/transl_table=11
/product="virulence factor"
/protein_id="NP_706990.2"
/db_xref="GeneID:1024011"
/translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
RTV"
misc_feature 1115609..1117123
/gene="mviN"
/locus_tag="SF1075"
/note="Lipid II flippase MurJ/MviN (peptidoglycan
biosynthesis) [Cell wall/membrane/envelope biogenesis];
Region: MurJ; COG0728"
/db_xref="CDD:440492"
gene complement(1117175..1117591)
/gene="flgN"
/locus_tag="SF1076"
/db_xref="GeneID:1024067"
CDS complement(1117175..1117591)
/gene="flgN"
/locus_tag="SF1076"
/note="Code: N; COG: COG3418"
/codon_start=1
/transl_table=11
/product="flagella synthesis chaperone protein FlgN"
/protein_id="NP_706991.1"
/db_xref="GeneID:1024067"
/translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
QKSSLLATLDYLEQLRKKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE
RNQQALEMLKPHQEPTLYGANGQTSTPHRGSKKISI"
misc_feature complement(1117178..1117591)
/gene="flgN"
/locus_tag="SF1076"
/note="flagella biosynthesis chaperone FlgN; Region:
PRK15459"
/db_xref="CDD:185356"
gene complement(1117596..1117889)
/gene="flgM"
/locus_tag="SF1077"
/db_xref="GeneID:1024006"
CDS complement(1117596..1117889)
/gene="flgM"
/locus_tag="SF1077"
/note="Code: KN; COG: COG2747"
/codon_start=1
/transl_table=11
/product="anti-sigma28 factor FlgM"
/protein_id="NP_706992.1"
/db_xref="GeneID:1024006"
/translation="MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLS
DAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN"
misc_feature complement(1117599..1117889)
/gene="flgM"
/locus_tag="SF1077"
/note="anti-sigma-28 factor FlgM; Region: PRK10810"
/db_xref="CDD:236765"
gene complement(1117965..1118624)
/gene="flgA"
/locus_tag="SF1078"
/db_xref="GeneID:1023994"
CDS complement(1117965..1118624)
/gene="flgA"
/locus_tag="SF1078"
/note="Code: N; COG: COG1261"
/codon_start=1
/transl_table=11
/product="flagellar basal body P-ring biosynthesis protein
FlgA"
/protein_id="NP_706993.1"
/db_xref="GeneID:1023994"
/translation="MLTIKRSVAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVR
VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
PIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAVSLRDLSPDQPIQLTQFRQAW
RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSEQVVSGVVDADGNILIN
L"
misc_feature complement(1117968..1118624)
/gene="flgA"
/locus_tag="SF1078"
/note="flagellar basal body P-ring formation protein FlgA;
Region: flgA; PRK07018"
/db_xref="CDD:180794"
gene 1118779..1119195
/gene="flgB"
/locus_tag="SF1079"
/db_xref="GeneID:1024053"
CDS 1118779..1119195
/gene="flgB"
/locus_tag="SF1079"
/note="Code: N; COG: COG1815"
/codon_start=1
/transl_table=11
/product="flagellar basal-body rod protein FlgB"
/protein_id="NP_706994.1"
/db_xref="GeneID:1024053"
/translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDID
FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDM
DRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN"
misc_feature 1118791..1119183
/gene="flgB"
/locus_tag="SF1079"
/note="flagellar basal-body rod protein FlgB; Region:
FlgB; TIGR01396"
/db_xref="CDD:273598"
gene 1119199..1119602
/locus_tag="SF1079a"
/pseudogene="unknown"
/db_xref="GeneID:16608314"
gene 1119614..1121542
/gene="flgE"
/locus_tag="SF1080"
/db_xref="GeneID:1024030"
CDS 1119614..1121542
/gene="flgE"
/locus_tag="SF1080"
/note="Code: N; COG: COG1749"
/codon_start=1
/transl_table=11
/product="flagellar hook protein FlgE"
/protein_id="NP_706995.3"
/db_xref="GeneID:1024030"
/translation="MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLK
NQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI
PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVH
SFTWDGSLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGT
YGTTTLDEVRQIIKAFTFQESVMAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGT
ASFADMFAGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY
SRNGQFKLDENRNLLNTQGLQLTGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTA
SMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV
YTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQ
NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNNSNEQTQLLGQIVLANFANNEGLA
SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSN
AQTIKTQDQILNTRVNLR"
misc_feature 1119614..1120306
/gene="flgE"
/locus_tag="SF1080"
/note="flagellar hook assembly protein FlgD; Region: flgD;
PRK06655"
/db_xref="CDD:235847"
misc_feature 1120334..1121539
/gene="flgE"
/locus_tag="SF1080"
/note="Flagellar hook protein FlgE [Cell motility];
Region: FlgE; COG1749"
/db_xref="CDD:441355"
gene 1121562..1122313
/gene="flgF"
/locus_tag="SF1081"
/pseudo
/db_xref="GeneID:1024050"
misc_feature 1121562..1122313
/gene="flgF"
/locus_tag="SF1081"
/note="'Similar to Escherichia coli K12 flagellar
biosynthesis, cell-proximal portion of basal-body rod gi:
1787317 (252 aa). BLAST with identity of 96% in 251 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct.'"
/pseudo
gene 1122451..1123233
/gene="flgG"
/locus_tag="SF1082"
/db_xref="GeneID:1024047"
CDS 1122451..1123233
/gene="flgG"
/locus_tag="SF1082"
/note="Code: N; COG: COG1749"
/codon_start=1
/transl_table=11
/product="flagellar basal body rod protein FlgG"
/protein_id="NP_706996.1"
/db_xref="GeneID:1024047"
/translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF
FQVMLPDGSSAYIRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT
QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY
VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL"
misc_feature 1122451..1123230
/gene="flgG"
/locus_tag="SF1082"
/note="flagellar basal body rod protein FlgG; Provisional;
Region: flgG; PRK12693"
/db_xref="CDD:183687"
gene 1123286..1123984
/gene="flgH"
/locus_tag="SF1083"
/db_xref="GeneID:1024037"
CDS 1123286..1123984
/gene="flgH"
/locus_tag="SF1083"
/note="Code: N; COG: COG2063"
/codon_start=1
/transl_table=11
/product="flagellar basal body L-ring protein"
/protein_id="NP_706997.2"
/db_xref="GeneID:1024037"
/translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQN
MGWLQRFFLNLSPM"
misc_feature 1123325..1123981
/gene="flgH"
/locus_tag="SF1083"
/note="flagellar basal body L-ring protein FlgH; Region:
flgH; PRK00249"
/db_xref="CDD:234700"
gene 1123996..1125093
/gene="flgI"
/locus_tag="SF1084"
/db_xref="GeneID:1024045"
CDS 1123996..1125093
/gene="flgI"
/locus_tag="SF1084"
/note="Code: N; COG: COG1706"
/codon_start=1
/transl_table=11
/product="flagellar basal body P-ring biosynthesis protein
FlgA"
/protein_id="NP_706998.2"
/db_xref="GeneID:1024045"
/translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG
LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT
IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQL
NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA
RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA
QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRA
LNALGATPMDLMSILQSMQSAGCLRAKLEII"
misc_feature 1123996..1125090
/gene="flgI"
/locus_tag="SF1084"
/note="flagellar basal body P-ring protein FlgI; Region:
flgI; PRK05303"
/db_xref="CDD:235399"
gene 1125093..1126034
/gene="flgJ"
/locus_tag="SF1085"
/db_xref="GeneID:1024046"
CDS 1125093..1126034
/gene="flgJ"
/locus_tag="SF1085"
/note="Code: N; COG: COG1705"
/codon_start=1
/transl_table=11
/product="flagellar rod assembly protein/muramidase FlgJ"
/protein_id="NP_706999.2"
/db_xref="GeneID:1024046"
/translation="MISDSKLLASAAWDAQSLNELKAKASEDPAANIRPVARQVEGMF
VQMMLKSMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQ
PLPEESTPAAPMKFPLETVVRYQNQTLSQLVQKAVPRNYDDSLPGDSRAFLAQLSLPA
QLASQQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGQVTEITT
TEYENGEAKKVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQGAQVLQDAG
YATDPHYARKLTNMIQQMKSISDKVSKTYSMNIDNLF"
misc_feature 1125096..1126019
/gene="flgJ"
/locus_tag="SF1085"
/note="flagellar assembly peptidoglycan hydrolase FlgJ;
Region: flgJ; PRK05684"
/db_xref="CDD:235559"
gene 1126100..1127742
/gene="flgK"
/locus_tag="SF1086"
/pseudo
/db_xref="GeneID:1023617"
misc_feature 1126100..1127742
/gene="flgK"
/locus_tag="SF1086"
/note="'Similar to Escherichia coli K12 flagellar
biosynthesis, hook-filament junction protein 1 gi: 1787323
(548 aa). BLAST with identity of 98% in 548 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct.'"
/pseudo
gene 1127754..1128696
/gene="flgL"
/locus_tag="SF1087"
/pseudo
/db_xref="GeneID:1024041"
misc_feature 1127754..1128696
/gene="flgL"
/locus_tag="SF1087"
/note="Similar to Escherichia coli K12 flagellar
biosynthesis; hook-filament junction protein gi: 1787324
(318 aa). BLAST with identity of 94% in 314 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct."
/pseudo
gene complement(1128893..1132075)
/gene="rne"
/locus_tag="SF1088"
/db_xref="GeneID:1024066"
CDS complement(1128893..1132075)
/gene="rne"
/locus_tag="SF1088"
/note="Code: J; COG: COG1530"
/codon_start=1
/transl_table=11
/product="RNase E"
/protein_id="NP_707000.4"
/db_xref="GeneID:1024066"
/translation="MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKIT
RIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQID
KEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEG
MGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDY
LRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAF
QREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLR
DLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPS
LGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLN
EKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEEAMA
LPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAATVVAPAPKAATATPAAPAQPG
LLSRFFGALKALFSGGEEAKPTEQPTPKAEAKPERQQDRRKPRQSNRRDRNERRDTRS
ERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTTDEQQAPRRERSRRRND
DKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAVVAP
VVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRSRRS
PRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQVEEQ
REQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPVPVAEPQPEVVETTHPEV
IAAAVTEQPQVITESDVAVAQEVAEHAEPMVEPQEETADADIEEVAETAEVVVAEPEV
VAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPRHSDWQRP
TFAFEGKGAAGGHTATHHASAAPARPQPVE"
misc_feature complement(1128905..1132075)
/gene="rne"
/locus_tag="SF1088"
/note="ribonuclease E; Reviewed; Region: rne; PRK10811"
/db_xref="CDD:236766"
gene 1132165..1132539
/locus_tag="SF1089"
/db_xref="GeneID:1024032"
CDS 1132165..1132539
/locus_tag="SF1089"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707001.1"
/db_xref="GeneID:1024032"
/translation="MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEI
FPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKP
CYSKMTFTIYHPLTHSFFTSCW"
gene 1132657..1133616
/gene="yceC"
/locus_tag="SF1090"
/db_xref="GeneID:1024055"
CDS 1132657..1133616
/gene="yceC"
/locus_tag="SF1090"
/note="Code: J; COG: COG0564"
/codon_start=1
/transl_table=11
/product="23S rRNA pseudouridylate synthase C"
/protein_id="NP_707002.1"
/db_xref="GeneID:1024055"
/translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
RSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR"
misc_feature 1132657..1133613
/gene="yceC"
/locus_tag="SF1090"
/note="23S rRNA pseudouridine(955/2504/2580) synthase
RluC; Region: PRK11025"
/db_xref="CDD:182909"
gene complement(1133728..1134351)
/gene="yceF"
/locus_tag="SF1091"
/db_xref="GeneID:1024042"
CDS complement(1133728..1134351)
/gene="yceF"
/locus_tag="SF1091"
/note="Code: D; COG: COG0424"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707003.3"
/db_xref="GeneID:1024042"
/translation="MAIINTLYLMEKNMPKLILASTSPWRRALLEKLQISFECAAPEV
DETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENAR
LQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHC
AGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG"
misc_feature complement(1133737..1134309)
/gene="yceF"
/locus_tag="SF1091"
/note="7-methyl-GTP pyrophosphatase and related NTP
pyrophosphatases, Maf/HAM1 superfamily [Secondary
metabolites biosynthesis, transport and catabolism];
Region: Maf; COG0424"
/db_xref="CDD:440193"
gene 1134511..1135032
/gene="yceD"
/locus_tag="SF1092"
/db_xref="GeneID:1025410"
CDS 1134511..1135032
/gene="yceD"
/locus_tag="SF1092"
/note="Code: R; COG: COG1399"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707004.1"
/db_xref="GeneID:1025410"
/translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEVQK
PNPFAVLASLKRK"
misc_feature 1134511..1135026
/gene="yceD"
/locus_tag="SF1092"
/note="23S rRNA accumulation protein YceD; Region:
PRK11193"
/db_xref="CDD:236878"
gene 1135084..1135257
/gene="rpmF"
/locus_tag="SF1093"
/db_xref="GeneID:1024049"
CDS 1135084..1135257
/gene="rpmF"
/locus_tag="SF1093"
/note="Code: J; COG: COG0333"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L32"
/protein_id="NP_707005.1"
/db_xref="GeneID:1024049"
/translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
ADGYYRGRKVIAK"
misc_feature 1135087..1135254
/gene="rpmF"
/locus_tag="SF1093"
/note="Ribosomal protein L32 [Translation, ribosomal
structure and biogenesis]; Region: RpmF; COG0333"
/db_xref="CDD:440102"
gene 1135368..1136408
/gene="plsX"
/locus_tag="SF1094"
/db_xref="GeneID:1024064"
CDS 1135368..1136408
/gene="plsX"
/locus_tag="SF1094"
/note="Code: I; COG: COG0416"
/codon_start=1
/transl_table=11
/product="PlsX protein"
/protein_id="NP_707006.4"
/db_xref="GeneID:1024064"
/translation="MGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDAITPLLAKADS
EQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRMALELVKEGRAQACVSAGNTGALM
GLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAE
EVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVL
VCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNP
DQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGF
ELLDGGKSGTLR"
misc_feature 1135368..1136354
/gene="plsX"
/locus_tag="SF1094"
/note="Acyl-ACP:phosphate acyltransferase (fatty
acid/phospholipid biosynthesis) [Lipid transport and
metabolism]; Region: PlsX; COG0416"
/db_xref="CDD:440185"
gene 1136476..1137429
/gene="fabH"
/locus_tag="SF1095"
/db_xref="GeneID:1024024"
CDS 1136476..1137429
/gene="fabH"
/locus_tag="SF1095"
/note="Code: I; COG: COG0332"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP synthase III"
/protein_id="NP_707007.1"
/db_xref="GeneID:1024024"
/translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLDIKG
CPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
misc_feature 1136476..1137426
/gene="fabH"
/locus_tag="SF1095"
/note="beta-ketoacyl-ACP synthase 3; Region: PRK09352"
/db_xref="CDD:236475"
gene 1137445..1138374
/gene="fabD"
/locus_tag="SF1096"
/db_xref="GeneID:1024028"
CDS 1137445..1138374
/gene="fabD"
/locus_tag="SF1096"
/note="Code: I; COG: COG0331"
/codon_start=1
/transl_table=11
/product="malonyl CoA-ACP transacylase"
/protein_id="NP_707008.1"
/db_xref="GeneID:1024028"
/translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
WALTQQGSAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDAPIAKACEEAAEGQVVSPVN
FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
ITFNAPTVSVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
misc_feature 1137448..1138320
/gene="fabD"
/locus_tag="SF1096"
/note="malonyl CoA-acyl carrier protein transacylase;
Region: fabD; TIGR00128"
/db_xref="CDD:272922"
gene 1138387..1139121
/gene="fabG"
/locus_tag="SF1097"
/db_xref="GeneID:1026267"
CDS 1138387..1139121
/gene="fabG"
/locus_tag="SF1097"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="3-ketoacyl-ACP reductase"
/protein_id="NP_707009.1"
/db_xref="GeneID:1026267"
/translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
VAFLASDEAAYITGETLHVNGGMYMV"
misc_feature 1138387..1139118
/gene="fabG"
/locus_tag="SF1097"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:235500"
gene 1139332..1139568
/gene="acpP"
/locus_tag="SF1098"
/db_xref="GeneID:1024038"
CDS 1139332..1139568
/gene="acpP"
/locus_tag="SF1098"
/note="Code: IQ; COG: COG0236"
/codon_start=1
/transl_table=11
/product="acyl carrier protein"
/protein_id="NP_707010.1"
/db_xref="GeneID:1024038"
/translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
misc_feature 1139332..1139565
/gene="acpP"
/locus_tag="SF1098"
/note="acyl carrier protein; Provisional; Region: acpP;
PRK00982"
/db_xref="CDD:179197"
gene 1139654..1140895
/gene="fabF"
/locus_tag="SF1099"
/db_xref="GeneID:1024036"
CDS 1139654..1140895
/gene="fabF"
/locus_tag="SF1099"
/note="Code: IQ; COG: COG0304"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP synthase"
/protein_id="NP_707011.1"
/db_xref="GeneID:1024036"
/translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSS
TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGME
YTLCNSFGFGGTNGSLIFKKI"
misc_feature 1139660..1140892
/gene="fabF"
/locus_tag="SF1099"
/note="beta-ketoacyl-ACP synthase II; Region: PRK07314"
/db_xref="CDD:235987"
misc_feature order(1139975..1139977,1139996..1140001,1140011..1140013,
1140017..1140022,1140056..1140058,1140074..1140076,
1140086..1140088,1140098..1140100,1140116..1140118,
1140122..1140124,1140128..1140136,1140170..1140172,
1140179..1140184,1140191..1140193,1140254..1140259,
1140266..1140271,1140443..1140457,1140497..1140499,
1140857..1140859,1140863..1140865)
/gene="fabF"
/locus_tag="SF1099"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238430"
misc_feature order(1140143..1140145,1140563..1140565,1140674..1140676)
/gene="fabF"
/locus_tag="SF1099"
/note="active site"
/db_xref="CDD:238430"
gene 1141015..1141824
/gene="pabC"
/locus_tag="SF1100"
/db_xref="GeneID:1024054"
CDS 1141015..1141824
/gene="pabC"
/locus_tag="SF1100"
/note="Code: EH; COG: COG0115"
/codon_start=1
/transl_table=11
/product="4-amino-4-deoxychorismate lyase"
/protein_id="NP_707012.1"
/db_xref="GeneID:1024054"
/translation="MFLINGYKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIL
RLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
ILSVTAYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
VQASLEEALQADEMVICNALMPVMPVRACGDVTFSSATLYEYLAPLCERPN"
misc_feature 1141015..1141818
/gene="pabC"
/locus_tag="SF1100"
/note="4-amino-4-deoxychorismate lyase; Reviewed; Region:
PRK06092"
/db_xref="CDD:235696"
misc_feature order(1141147..1141149,1141432..1141434,1141531..1141533)
/gene="pabC"
/locus_tag="SF1100"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:238800"
misc_feature 1141432..1141434
/gene="pabC"
/locus_tag="SF1100"
/note="catalytic residue [active]"
/db_xref="CDD:238800"
gene 1141827..1142849
/gene="yceG"
/locus_tag="SF1101"
/db_xref="GeneID:1024043"
CDS 1141827..1142849
/gene="yceG"
/locus_tag="SF1101"
/note="Code: R; COG: COG1559"
/codon_start=1
/transl_table=11
/product="aminodeoxychorismate lyase"
/protein_id="NP_707013.1"
/db_xref="GeneID:1024043"
/translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
FWPDTLMYTANTTDVALLKRVHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE
TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
KEKNAQ"
misc_feature 1141827..1142846
/gene="yceG"
/locus_tag="SF1101"
/note="putative aminodeoxychorismate lyase; Provisional;
Region: PRK10270"
/db_xref="CDD:182348"
misc_feature order(1142070..1142072,1142076..1142093,1142118..1142120,
1142130..1142132,1142151..1142156,1142163..1142165,
1142553..1142555,1142559..1142561,1142610..1142612,
1142619..1142621,1142760..1142765,1142784..1142786,
1142793..1142798,1142805..1142807)
/gene="yceG"
/locus_tag="SF1101"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:381750"
gene 1142839..1143480
/gene="tmk"
/locus_tag="SF1102"
/db_xref="GeneID:1024058"
CDS 1142839..1143480
/gene="tmk"
/locus_tag="SF1102"
/note="Code: F; COG: COG0125"
/codon_start=1
/transl_table=11
/product="thymidylate kinase"
/protein_id="NP_707014.1"
/db_xref="GeneID:1024058"
/translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
misc_feature 1142839..1143438
/gene="tmk"
/locus_tag="SF1102"
/note="dTMP kinase; Region: DTMP_kinase; TIGR00041"
/db_xref="CDD:161676"
misc_feature order(1142887..1142889,1143058..1143060,1143070..1143072,
1143133..1143138,1143160..1143162,1143295..1143297)
/gene="tmk"
/locus_tag="SF1102"
/note="TMP-binding site [active]"
/db_xref="CDD:238835"
misc_feature order(1142890..1142892,1143283..1143285,1143403..1143405)
/gene="tmk"
/locus_tag="SF1102"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238835"
gene 1143477..1144481
/gene="holB"
/locus_tag="SF1103"
/db_xref="GeneID:1024040"
CDS 1143477..1144481
/gene="holB"
/locus_tag="SF1103"
/note="Code: L; COG: COG0470"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit delta'"
/protein_id="NP_707015.1"
/db_xref="GeneID:1024040"
/translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKLNE
HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ
ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
"
misc_feature 1143477..1144478
/gene="holB"
/locus_tag="SF1103"
/note="DNA polymerase III subunit delta'; Validated;
Region: PRK07993"
/db_xref="CDD:181190"
gene 1144492..1145289
/gene="ycfH"
/locus_tag="SF1104"
/db_xref="GeneID:1024039"
CDS 1144492..1145289
/gene="ycfH"
/locus_tag="SF1104"
/note="Code: L; COG: COG0084"
/codon_start=1
/transl_table=11
/product="DNAse"
/protein_id="NP_707016.2"
/db_xref="GeneID:1024039"
/translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVEPLCETGLDYYYT
PETKVLQRESFIHHIQIARELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
misc_feature 1144492..1145286
/gene="ycfH"
/locus_tag="SF1104"
/note="putative DNAse; Provisional; Region: PRK10812"
/db_xref="CDD:236767"
misc_feature order(1144510..1144512,1144516..1144518,1144879..1144881,
1144954..1144956,1145104..1145106)
/gene="ycfH"
/locus_tag="SF1104"
/note="active site"
/db_xref="CDD:238635"
gene 1145585..1147018
/gene="ptsG"
/locus_tag="SF1105"
/db_xref="GeneID:1024074"
CDS 1145585..1147018
/gene="ptsG"
/locus_tag="SF1105"
/note="Code: G; COG: COG1263"
/codon_start=1
/transl_table=11
/product="PTS system glucose-specific transporter subunits
IIBC"
/protein_id="NP_707017.1"
/db_xref="GeneID:1024074"
/translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
RAKVGGIMISAALTSFLTGITEPIEFFFMFVAPILYIIHAILAGLAFPICILLGMRDG
TSFSHGLIDFIVLSGNSSKLWLLPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
AGSGVQAIFGTKSDNLKTEMDEYIRNH"
misc_feature 1145585..1147015
/gene="ptsG"
/locus_tag="SF1105"
/note="PTS system glucose-specific transporter subunits
IIBC; Provisional; Region: PRK11089"
/db_xref="CDD:182955"
gene complement(1147078..1149263)
/gene="fhuE"
/locus_tag="SF1106"
/pseudo
/db_xref="GeneID:1024035"
misc_feature complement(1147078..1149263)
/gene="fhuE"
/locus_tag="SF1106"
/note="Similar to Escherichia coli K12 outer membrane
receptor for ferric iron uptake gi: 1787344 (730 aa).
BLAST with identity of 99% in 728 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene 1149602..1149961
/gene="ycfF"
/locus_tag="SF1107"
/db_xref="GeneID:1024069"
CDS 1149602..1149961
/gene="ycfF"
/locus_tag="SF1107"
/note="Code: FGR; COG: COG0537"
/codon_start=1
/transl_table=11
/product="purine nucleoside phosphoramidase"
/protein_id="NP_707018.2"
/db_xref="GeneID:1024069"
/translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
NILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
HLLGGRPLGPMLAHKGL"
misc_feature 1149602..1149958
/gene="ycfF"
/locus_tag="SF1107"
/note="purine nucleoside phosphoramidase; Provisional;
Region: PRK10687"
/db_xref="CDD:182648"
misc_feature order(1149686..1149688,1149692..1149697,1149716..1149718,
1149722..1149724,1149863..1149865,1149884..1149886,
1149890..1149892,1149902..1149904,1149908..1149910)
/gene="ycfF"
/locus_tag="SF1107"
/note="nucleotide binding site/active site [active]"
/db_xref="CDD:238607"
misc_feature order(1149896..1149898,1149902..1149904,1149908..1149916)
/gene="ycfF"
/locus_tag="SF1107"
/note="HIT family signature motif [active]"
/db_xref="CDD:238607"
misc_feature 1149902..1149904
/gene="ycfF"
/locus_tag="SF1107"
/note="catalytic residue [active]"
/db_xref="CDD:238607"
gene 1149964..1150341
/gene="ycfL"
/locus_tag="SF1108"
/db_xref="GeneID:1025390"
CDS 1149964..1150341
/gene="ycfL"
/locus_tag="SF1108"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707019.1"
/db_xref="GeneID:1025390"
/translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
SAEKPVLSTSDIQPSASSTIYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH
SAVTLYGSANFLGAHKVRLYLYL"
misc_feature 1150015..1150338
/gene="ycfL"
/locus_tag="SF1108"
/note="Uncharacterized conserved protein YcfL [Function
unknown]; Region: YcfL; COG5633"
/db_xref="CDD:444360"
misc_feature order(1150033..1150047,1150060..1150062,1150093..1150095,
1150099..1150101,1150105..1150107,1150243..1150245,
1150321..1150335)
/gene="ycfL"
/locus_tag="SF1108"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:176923"
gene 1150356..1150996
/locus_tag="SF1109"
/pseudogene="unknown"
/db_xref="GeneID:1024081"
gene 1150977..1151801
/gene="thiK"
/locus_tag="SF1110"
/db_xref="GeneID:1024080"
CDS 1150977..1151801
/gene="thiK"
/locus_tag="SF1110"
/note="Code: M; COG: COG0510"
/codon_start=1
/transl_table=11
/product="thiamine kinase"
/protein_id="NP_707021.1"
/db_xref="GeneID:1024080"
/translation="MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
RFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPD
TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP
LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYA
TRAKIYPAQLWRQVRRWFPWLLMLKGGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
misc_feature order(1151070..1151081,1151082..1151084,1151115..1151117,
1151121..1151123,1151205..1151207,1151241..1151252,
1151481..1151483,1151493..1151498,1151502..1151504,
1151529..1151534)
/gene="thiK"
/locus_tag="SF1110"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:270700"
misc_feature 1151235..1151798
/gene="thiK"
/locus_tag="SF1110"
/note="thiamine kinase; Provisional; Region: thiK;
PRK10271"
/db_xref="CDD:182349"
gene 1151812..1152837
/gene="ycfO"
/locus_tag="SF1111"
/db_xref="GeneID:1024077"
CDS 1151812..1152837
/gene="ycfO"
/locus_tag="SF1111"
/note="Code: G; COG: COG1472"
/codon_start=1
/transl_table=11
/product="beta-hexosaminidase"
/protein_id="NP_707022.1"
/db_xref="GeneID:1024077"
/translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGW
LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKT
TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSD
VDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERW
QEEKAGH"
misc_feature 1151812..1152816
/gene="ycfO"
/locus_tag="SF1111"
/note="beta-hexosaminidase; Provisional; Region: PRK05337"
/db_xref="CDD:235417"
gene 1152860..1153402
/gene="ycfP"
/locus_tag="SF1112"
/db_xref="GeneID:1023394"
CDS 1152860..1153402
/gene="ycfP"
/locus_tag="SF1112"
/note="Code: R; COG: COG3150"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707023.2"
/db_xref="GeneID:1023394"
/translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
HKFKNISPHLQRIKAFKTLG"
misc_feature 1152860..1153399
/gene="ycfP"
/locus_tag="SF1112"
/note="hypothetical protein; Provisional; Region:
PRK04940"
/db_xref="CDD:179896"
gene 1153810..1155114
/gene="ndh"
/locus_tag="SF1113"
/db_xref="GeneID:1024070"
CDS 1153810..1155114
/gene="ndh"
/locus_tag="SF1113"
/note="Code: C; COG: COG1252"
/codon_start=1
/transl_table=11
/product="respiratory NADH dehydrogenase"
/protein_id="NP_707024.2"
/db_xref="GeneID:1024070"
/translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK
YSANLGANGKVNIAIVGGGATGVELSAELHNAIKQLHSYGYKGLTNEALNVTLVEAGE
RILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
KAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAA
HQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
misc_feature 1153861..1155057
/gene="ndh"
/locus_tag="SF1113"
/note="NADH dehydrogenase, FAD-containing subunit [Energy
production and conversion]; Region: Ndh; COG1252"
/db_xref="CDD:440864"
gene 1155341..1155880
/gene="ycfJ"
/locus_tag="SF1114"
/db_xref="GeneID:1024075"
CDS 1155341..1155880
/gene="ycfJ"
/locus_tag="SF1114"
/note="Code: S; COG: COG3134"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707025.2"
/db_xref="GeneID:1024075"
/translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
PGTQIPLDSNGQLILNNKV"
misc_feature 1155359..1155868
/gene="ycfJ"
/locus_tag="SF1114"
/note="hypothetical protein; Provisional; Region:
PRK11280"
/db_xref="CDD:183072"
gene complement(1155942..1156652)
/gene="ycfQ"
/locus_tag="SF1115"
/db_xref="GeneID:1024057"
CDS complement(1155942..1156652)
/gene="ycfQ"
/locus_tag="SF1115"
/note="Code: K; COG: COG1309"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707026.1"
/db_xref="GeneID:1024057"
/translation="MESGLVNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKV
FDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYID
RFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIA
NTLKSRHAMQERTLQQFLCQRQARGEIPTHCDVTHLAEFLNCIIQGMSISAREGASLE
KLMQIAGTTLRLWPELVK"
misc_feature complement(1156035..1156532)
/gene="ycfQ"
/locus_tag="SF1115"
/note="DNA-binding protein, AcrR family, includes nucleoid
occlusion protein SlmA [Transcription]; Region: AcrR;
COG1309"
/db_xref="CDD:440920"
gene 1156859..1157071
/gene="ycfR"
/locus_tag="SF1116"
/db_xref="GeneID:1024071"
CDS 1156859..1157071
/gene="ycfR"
/locus_tag="SF1116"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707027.1"
/db_xref="GeneID:1024071"
/translation="MSFANFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKAD
EMGAKSFRITSVTGPNTLHGTAVIYK"
misc_feature 1156910..1157065
/gene="ycfR"
/locus_tag="SF1116"
/note="YdgH/BhsA/McbA-like domain; Region: YdgH_BhsA-like;
pfam07338"
/db_xref="CDD:429417"
gene complement(1157154..1158116)
/gene="ycfS"
/locus_tag="SF1117"
/db_xref="GeneID:1024089"
CDS complement(1157154..1158116)
/gene="ycfS"
/locus_tag="SF1117"
/note="Code: S; COG: COG1376"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707028.2"
/db_xref="GeneID:1024089"
/translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPASSRLVGEN
KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE
GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN
IRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI
TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL"
misc_feature complement(1157193..1158029)
/gene="ycfS"
/locus_tag="SF1117"
/note="L,D-transpeptidase; Provisional; Region: PRK10260"
/db_xref="CDD:182341"
gene complement(1158259..1161705)
/gene="mfd"
/locus_tag="SF1118"
/db_xref="GeneID:1024090"
CDS complement(1158259..1161705)
/gene="mfd"
/locus_tag="SF1118"
/note="Code: LK; COG: COG1197"
/codon_start=1
/transl_table=11
/product="transcription-repair coupling factor"
/protein_id="NP_707029.2"
/db_xref="GeneID:1024090"
/translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
RGILIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEAEAINLLPAHEFP
TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
PRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKARNLALICESDLL
GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
ASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIE
FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA
IA"
misc_feature complement(1158265..1161705)
/gene="mfd"
/locus_tag="SF1118"
/note="transcription-repair coupling factor; Provisional;
Region: PRK10689"
/db_xref="CDD:182649"
gene complement(1161833..1162906)
/gene="ycfT"
/locus_tag="SF1119"
/db_xref="GeneID:1024073"
CDS complement(1161833..1162906)
/gene="ycfT"
/locus_tag="SF1119"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707030.1"
/db_xref="GeneID:1024073"
/translation="MKQKELWINQIKGLCICLVVIYHSVITFYPHMTTFQHPLSEVLS
KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW
LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF
SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR
RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN
TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL
SQRAFSDLLFSPPSLPAAVSYSR"
misc_feature complement(1161836..1162903)
/gene="ycfT"
/locus_tag="SF1119"
/note="Uncharacterized membrane protein YcfT [Function
unknown]; Region: YcfT; COG4763"
/db_xref="CDD:443795"
gene 1163168..1164367
/gene="ycfU"
/locus_tag="SF1120"
/db_xref="GeneID:1024063"
CDS 1163168..1164367
/gene="ycfU"
/locus_tag="SF1120"
/note="Code: R; COG: COG0577"
/codon_start=1
/transl_table=11
/product="outer membrane-specific lipoprotein transporter
subunit LolC"
/protein_id="NP_707031.2"
/db_xref="GeneID:1024063"
/translation="MYQPVALFIGLRYMRGRAVDRFGRFVSWLSTIGITLGVMALVTV
LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV
LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
QIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAAN
ITGWRLWLDEPLRVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGA
LLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
AEALRYE"
misc_feature 1163168..1164364
/gene="ycfU"
/locus_tag="SF1120"
/note="lipoprotein-releasing ABC transporter permease
subunit LolC; Region: PRK10814"
/db_xref="CDD:182753"
gene 1164360..1165061
/gene="lolD"
/locus_tag="SF1121"
/db_xref="GeneID:1026274"
CDS 1164360..1165061
/gene="lolD"
/locus_tag="SF1121"
/note="Code: R; COG: COG1136"
/codon_start=1
/transl_table=11
/product="lipoprotein transporter ATP-binding subunit"
/protein_id="NP_707032.1"
/db_xref="GeneID:1026274"
/translation="MNKILLQCDNLCKRYQEGSVQTDVLLNVSFSVGEGEMMAIVGSS
GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
TALENVAMPLLIGKKKPAEINSCALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
RDGRLTAELSLMGAE"
misc_feature 1164360..1165058
/gene="lolD"
/locus_tag="SF1121"
/note="lipoprotein-releasing ABC transporter ATP-binding
protein LolD; Region: lolD; PRK11629"
/db_xref="CDD:183244"
gene 1165061..1166305
/gene="ycfW"
/locus_tag="SF1122"
/db_xref="GeneID:1024076"
CDS 1165061..1166305
/gene="ycfW"
/locus_tag="SF1122"
/note="Code: R; COG: COG0577"
/codon_start=1
/transl_table=11
/product="outer membrane-specific lipoprotein transporter
subunit LolE"
/protein_id="NP_707033.1"
/db_xref="GeneID:1024076"
/translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTG
LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
KQGDWVSIMIPNSNPEHKLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMG
SSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
VVIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
LASWYPARRASNIDPARVLSGQ"
misc_feature 1165067..1166302
/gene="ycfW"
/locus_tag="SF1122"
/note="lipoprotein-releasing ABC transporter permease
subunit LolE; Region: PRK11146"
/db_xref="CDD:236860"
gene 1166334..1167245
/gene="ycfX"
/locus_tag="SF1123"
/db_xref="GeneID:1024059"
CDS 1166334..1167245
/gene="ycfX"
/locus_tag="SF1123"
/note="Code: K; COG: COG1940"
/codon_start=1
/transl_table=11
/product="N-acetyl-D-glucosamine kinase"
/protein_id="NP_707034.1"
/db_xref="GeneID:1024059"
/translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC
ELVAEADQRFGCKGSVGIGIPGMPETEDGKLYAANVPAASGKPLRADLSARLDRDVRL
DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVFNGKPITGKSYITGEFGHMRL
PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQG
DEQARAHVERYLDLLAVSLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPCHLLPV
ARVPRIERARHGDAGGMRGAAFLHLTD"
misc_feature 1166334..1167242
/gene="ycfX"
/locus_tag="SF1123"
/note="N-acetyl-D-glucosamine kinase; Provisional; Region:
PRK13310"
/db_xref="CDD:183967"
gene 1167261..1168082
/gene="cobB"
/locus_tag="SF1124"
/db_xref="GeneID:1024068"
CDS 1167261..1168082
/gene="cobB"
/locus_tag="SF1124"
/note="Code: H; COG: COG0846"
/codon_start=1
/transl_table=11
/product="NAD-dependent deacetylase"
/protein_id="NP_707035.1"
/db_xref="GeneID:1024068"
/translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
EIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADVFIAIGTSGH
VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLEGL"
misc_feature 1167351..1168073
/gene="cobB"
/locus_tag="SF1124"
/note="NAD-dependent deacetylase; Provisional; Region:
PRK00481"
/db_xref="CDD:234777"
misc_feature order(1167408..1167410,1167414..1167419,1167438..1167443,
1167588..1167590,1167645..1167650,1167654..1167656,
1167699..1167701,1167900..1167902,1167915..1167917,
1167981..1167986,1168029..1168031)
/gene="cobB"
/locus_tag="SF1124"
/note="NAD+ binding site [chemical binding]; other site"
/db_xref="CDD:238703"
misc_feature order(1167651..1167653,1167699..1167701,1167822..1167824,
1167828..1167839,1167912..1167920)
/gene="cobB"
/locus_tag="SF1124"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238703"
misc_feature order(1167723..1167725,1167732..1167734,1167780..1167782,
1167789..1167791)
/gene="cobB"
/locus_tag="SF1124"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:238703"
gene complement(1168238..1169284)
/gene="potD"
/locus_tag="SF1125"
/db_xref="GeneID:1024061"
CDS complement(1168238..1169284)
/gene="potD"
/locus_tag="SF1125"
/note="Code: E; COG: COG0687"
/codon_start=1
/transl_table=11
/product="spermidine/putrescine ABC transporter
substrate-binding protein"
/protein_id="NP_707036.1"
/db_xref="GeneID:1024061"
/translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK
GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
SIYEEYYQKLKAGR"
misc_feature complement(1168241..1169284)
/gene="potD"
/locus_tag="SF1125"
/note="spermidine/putrescine ABC transporter periplasmic
substrate-binding protein; Reviewed; Region: potD;
PRK09501"
/db_xref="CDD:181913"
misc_feature complement(order(1168574..1168576,1168580..1168582,
1168625..1168630,1168637..1168639,1169105..1169107,
1169111..1169122,1169153..1169155,1169162..1169167,
1169180..1169182,1169195..1169197))
/gene="potD"
/locus_tag="SF1125"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:270378"
misc_feature complement(order(1168406..1168408,1168514..1168516,
1168520..1168522,1168589..1168591,1168598..1168600,
1169183..1169185))
/gene="potD"
/locus_tag="SF1125"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270378"
gene complement(1169281..1170075)
/gene="potC"
/locus_tag="SF1126"
/db_xref="GeneID:1024056"
CDS complement(1169281..1170075)
/gene="potC"
/locus_tag="SF1126"
/note="Code: E; COG: COG1177"
/codon_start=1
/transl_table=11
/product="spermidine/putrescine ABC transporter permease"
/protein_id="NP_707037.1"
/db_xref="GeneID:1024056"
/translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNGGDVK"
misc_feature complement(1169305..1170072)
/gene="potC"
/locus_tag="SF1126"
/note="spermidine/putrescine ABC transporter membrane
protein; Reviewed; Region: potC; PRK09500"
/db_xref="CDD:236542"
gene complement(1170072..1170899)
/gene="potB"
/locus_tag="SF1127"
/db_xref="GeneID:1024098"
CDS complement(1170072..1170899)
/gene="potB"
/locus_tag="SF1127"
/note="Code: E; COG: COG1176"
/codon_start=1
/transl_table=11
/product="spermidine/putrescine ABC transporter permease"
/protein_id="NP_707038.4"
/db_xref="GeneID:1024098"
/translation="MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYT
RLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTN
SLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLY
SSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLM
GGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE"
misc_feature complement(1170075..1170899)
/gene="potB"
/locus_tag="SF1127"
/note="spermidine/putrescine ABC transporter membrane
protein; Reviewed; Region: potB; PRK09497"
/db_xref="CDD:181910"
misc_feature complement(order(1170138..1170140,1170147..1170152,
1170159..1170164,1170168..1170173,1170180..1170185,
1170213..1170218,1170249..1170254,1170261..1170272,
1170291..1170293,1170300..1170305,1170345..1170347,
1170396..1170398,1170405..1170410,1170420..1170422,
1170426..1170431,1170438..1170440,1170444..1170446,
1170450..1170455,1170528..1170530,1170573..1170578,
1170585..1170614,1170618..1170629,1170657..1170659,
1170672..1170677,1170684..1170689))
/gene="potB"
/locus_tag="SF1127"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(1170255..1170272,1170528..1170530,
1170570..1170611))
/gene="potB"
/locus_tag="SF1127"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(1170183..1170185,1170213..1170215,
1170222..1170224,1170252..1170254,1170468..1170470,
1170528..1170530))
/gene="potB"
/locus_tag="SF1127"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(1170324..1170326,1170336..1170341,
1170357..1170395))
/gene="potB"
/locus_tag="SF1127"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(1170913..1172049)
/gene="potA"
/locus_tag="SF1128"
/db_xref="GeneID:1024051"
CDS complement(1170913..1172049)
/gene="potA"
/locus_tag="SF1128"
/note="Code: G; COG: COG1130"
/codon_start=1
/transl_table=11
/product="putrescine/spermidine ABC transporter ATPase"
/protein_id="NP_707039.1"
/db_xref="GeneID:1024051"
/translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP
HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
VVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
misc_feature complement(1170916..1172040)
/gene="potA"
/locus_tag="SF1128"
/note="spermidine/putrescine ABC transporter ATP-binding
protein PotA; Region: potA; PRK09452"
/db_xref="CDD:236523"
gene 1172299..1173525
/gene="pepT"
/locus_tag="SF1129"
/db_xref="GeneID:1024052"
CDS 1172299..1173525
/gene="pepT"
/locus_tag="SF1129"
/note="Code: E; COG: COG2195"
/codon_start=1
/transl_table=11
/product="peptidase T"
/protein_id="NP_707040.2"
/db_xref="GeneID:1024052"
/translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLASMKGTVERADMH
YIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVILEGMEK
AVQVIVRIAELTAQRK"
misc_feature 1172299..1173522
/gene="pepT"
/locus_tag="SF1129"
/note="tripeptide aminopeptidase PepT; Region: PRK05469"
/db_xref="CDD:235484"
misc_feature order(1172548..1172550,1172965..1172973,1172977..1172985,
1172989..1172991,1172995..1172997,1173001..1173006,
1173013..1173015,1173022..1173024,1173049..1173063,
1173076..1173078,1173082..1173108,1173355..1173357,
1173433..1173435)
/gene="pepT"
/locus_tag="SF1129"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:349887"
gene complement(1173574..1174704)
/gene="ycfD"
/locus_tag="SF1130"
/db_xref="GeneID:1024101"
CDS complement(1173574..1174704)
/gene="ycfD"
/locus_tag="SF1130"
/note="Code: S; COG: COG2850"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707041.1"
/db_xref="GeneID:1024101"
/translation="MLNMEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELA
GLAMESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRP
FRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHP
DLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFA
DYVLQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFIS
QSRHELDIAPPEPPYQPDEIYDALKQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRP
ALDALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
misc_feature complement(1173868..1174677)
/gene="ycfD"
/locus_tag="SF1130"
/note="Ribosomal protein L16 Arg81 hydroxylase, contains
JmjC domain [Translation, ribosomal structure and
biogenesis]; Region: RoxA; COG2850"
/db_xref="CDD:442098"
misc_feature complement(1173586..1173930)
/gene="ycfD"
/locus_tag="SF1130"
/note="ROXA-like winged helix; Region: ROXA-like_wH;
pfam20514"
/db_xref="CDD:466663"
gene 1174944..1176173
/locus_tag="SF1131"
/pseudogene="unknown"
/db_xref="GeneID:1023407"
gene 1178175..1178408
/locus_tag="SF1133a"
/db_xref="GeneID:16608315"
CDS 1178175..1178408
/locus_tag="SF1133a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439238.1"
/db_xref="GeneID:16608315"
/translation="MRDIYHETIDRAFLALSHSENMLEILRIWLETLGDNERDKQKSR
IATALITLLEPVIMELQEIDLLHDRYKEQHTGE"
gene 1178414..1178713
/locus_tag="SF1134"
/db_xref="GeneID:1024092"
CDS 1178414..1178713
/locus_tag="SF1134"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707045.1"
/db_xref="GeneID:1024092"
/translation="MKLKYSGLTASGNTHPKFTRGDIYRDQYGGMVTIKGVAERRITY
RREGYEYDCVMPVYQFRRDFTLVQAAPRSKPTSREKARANIQEIKKMLNVFRGKK"
misc_feature 1178459..1178617
/locus_tag="SF1134"
/note="Domain of unknown function (DUF4222); Region:
DUF4222; pfam13973"
/db_xref="CDD:372855"
gene 1178710..1180458
/locus_tag="SF1135"
/db_xref="GeneID:1024095"
CDS 1178710..1180458
/locus_tag="SF1135"
/note="Code: R; COG: COG3378"
/codon_start=1
/transl_table=11
/product="bacteriophage P4 DNA primase"
/protein_id="NP_707046.2"
/db_xref="GeneID:1024095"
/translation="MKLAPNVKKQPRGIKHKDTEVIIFAGSDAWSHAKQWQEQDGPAS
GDNVPPVWLGPNQLAELDALKIVPDGKKRVRLYQAGELDLVETKKIGQKLAAADIQDA
NFYPEGMHVQKCENWRRYLNAERENIAAGLTMPEQKNTQLAQMADSERAQLLAERFDG
VCVHQESEIVHVWRGGVWCPVSTMELSREMVVIYSEHRATFSKRVINNAVEALKVIAE
PMGEPSGDLLPFANGALDLKTGEFSPHTPENWITTHNGIEYTPPAPGENIRDNALNFH
KWLEHAAGKDQRKMMRICAALYMIMANRYDWQMFIEATGDGGSGKSTFTHIASLLAGK
QNTVSAEMTSLDDAGGRAQVVGSRLIVLADQPKYTGEGTGIKKITGGDPVEINPKYEK
RFTAVIRAVVLATNNNPMIFTERAGGVARRRVIFRFDNIVSEAEKDRELPEKIAAEIP
VIIRRLLANFTDSEKARALLLEQRDGDEALAIKQQTDPVIEFCQFLNFLEEARGLMMG
GGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLNVNDFGKAMKPAAKVYGHEYITRKVKG
VTQTNAITTDECDAFL"
misc_feature 1179199..1180419
/locus_tag="SF1135"
/note="DNA primase, phage- or plasmid-associated
[Mobilome: prophages, transposons]; Region: COG3378"
/db_xref="CDD:442605"
gene 1180747..1181025
/locus_tag="SF1136"
/db_xref="GeneID:1024088"
CDS 1180747..1181025
/locus_tag="SF1136"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707047.3"
/db_xref="GeneID:1024088"
/translation="MHTSGKFNKSFKKRRDRTEPKYRALDMTEHALKVAIRTIDRHAG
EGYAKAHPELISAFMTTTAANFATLTEREIAEAEQVTTINVKTGEVES"
gene 1181562..1181864
/locus_tag="SF1137"
/db_xref="GeneID:1024117"
CDS 1181562..1181864
/locus_tag="SF1137"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707048.3"
/db_xref="GeneID:1024117"
/translation="MEHYWLFVTVRHSYYLKQTDTTEENAMPMKFDEILKQRDKYHAD
NMETMNITDYRAFLETGALIEKDHHGFVRCALSGEMLAVNPEQTDALIEFLKGIRD"
gene 1182117..1183322
/locus_tag="SF1138"
/pseudo
/db_xref="GeneID:1024103"
misc_feature 1182117..1183322
/locus_tag="SF1138"
/note="Similar to Escherichia coli O157:H7 EDL933 capsid
protein of prophage CP-933C ref: NP_287332.1 (385 aa).
BLAST with identity of 98% in 402 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene 1183362..1183934
/locus_tag="SF1139"
/db_xref="GeneID:1024060"
CDS 1183362..1183934
/locus_tag="SF1139"
/codon_start=1
/transl_table=11
/product="head maturation protease of prophage CP-933C"
/protein_id="NP_707049.2"
/db_xref="GeneID:1024060"
/translation="MGEKIMKSMEIRSSEITTSGAGTLTGYVVRWDKLSELLWGEFYE
KFQRGAFTEWLAAGNDVRGLYEHDHSMLLGRTRSGTLKLEEDETGLRFELTPPDTSTG
RDVIELVKRGDISGMSFGFRSRKDVWDTTTDPCVRTVLVAELYEITVTSVPAYPDSGV
ELARRSLYEQHPEKMPRADNRRWWADLAGV"
misc_feature 1183425..1183865
/locus_tag="SF1139"
/note="phage prohead protease, HK97 family; Region:
proheadase_HK97; TIGR01543"
/db_xref="CDD:273682"
gene 1183936..1185147
/locus_tag="SF1140"
/db_xref="GeneID:1024079"
CDS 1183936..1185147
/locus_tag="SF1140"
/codon_start=1
/transl_table=11
/product="head portal protein"
/protein_id="NP_707050.1"
/db_xref="GeneID:1024079"
/translation="MWPFRRKKEQRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAV
MNAVTVISDAVATMPCYLYLVRNEKGKEAREWLDSHPVDHILNERPNAWQTPYQFKRM
MIRYCLLSGNAYAVIQWGRDGFPAALHPYPPQSVNVEQTGDHNWRYCITDAYTGNIRN
YLPWEVLHLRYSTDDGFMGRSPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGE
WLDGVRGKQALAALERYKGARNAGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDI
ARMFNVSPIFLQEYSNSTYSNFSEASRAFLTMTMRPWLANFEQQIKNALLVASPVPGI
RYQVEFDSADLLRATPGERFATYERGIKSDVMCPNEAREREGLSPRDGGDEFSQAWKQ
EVKISEGEKPE"
misc_feature 1183936..1185144
/locus_tag="SF1140"
/note="Phage portal protein BeeE [Mobilome: prophages,
transposons]; Region: BeeE; COG4695"
/db_xref="CDD:443730"
gene 1185144..1185482
/locus_tag="SF1141"
/db_xref="GeneID:1024086"
CDS 1185144..1185482
/locus_tag="SF1141"
/codon_start=1
/transl_table=11
/product="head-tail adaptor"
/protein_id="NP_707051.1"
/db_xref="GeneID:1024086"
/translation="MNIGRLRDRITIQTLKQTRDITGEILETWEDGHTLWASVNMVSS
KEAISSGAELAIGTVRIWIRYRKDINATSRIKVSTGPLAGRVLNIIGQPLPDAARTRL
EILCREGAEK"
misc_feature 1185144..1185479
/locus_tag="SF1141"
/note="Phage head-tail adaptor [Mobilome: prophages,
transposons]; Region: COG5614"
/db_xref="CDD:444345"
gene 1185479..1185775
/locus_tag="SF1142"
/db_xref="GeneID:1024105"
CDS 1185479..1185775
/locus_tag="SF1142"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707052.1"
/db_xref="GeneID:1024105"
/translation="MTEELITLEEVKLHCRIDGDDEDQLISGYIAASLEACQIHIGRR
FDDGLAFTPAIKIGCMMFIAHLYENRQIVADNAKTRVPMTIGALWTAYRDVGGY"
misc_feature 1185497..1185769
/locus_tag="SF1142"
/note="uncharacterized phage protein (possible DNA
packaging); Region: put_DNA_pack; TIGR01560"
/db_xref="CDD:130623"
misc_feature order(1185506..1185508,1185515..1185520,1185524..1185526,
1185548..1185553,1185560..1185565,1185569..1185574,
1185581..1185586,1185593..1185595,1185632..1185640,
1185647..1185649,1185656..1185664,1185668..1185676,
1185680..1185688,1185716..1185733,1185737..1185742,
1185749..1185754)
/locus_tag="SF1142"
/note="oligomerization interface [polypeptide binding];
other site"
/db_xref="CDD:153446"
gene 1185775..1186215
/locus_tag="SF1143"
/db_xref="GeneID:1024085"
CDS 1185775..1186215
/locus_tag="SF1143"
/codon_start=1
/transl_table=11
/product="HNH endonuclease"
/protein_id="NP_707053.3"
/db_xref="GeneID:1024085"
/translation="MPWQPLRRCTEPGCNRRVKSGKCEEHRRAAWRAEDARRGHRRAR
GYSRQWDKYRAMYLSKNPLCVRCLEKGIYTPAVVVDHIIPINGGDDVLFWPEWNHQPL
CQACHNQKTKWLDPATKSKRAAGGFREEEERAANRNNWMYDADE"
misc_feature 1185925..1186107
/locus_tag="SF1143"
/note="HNH nucleases; HNH endonuclease signature which is
found in viral, prokaryotic, and eukaryotic proteins. The
alignment includes members of the large group of homing
endonucleases, yeast intron 1 protein, MutS, as well as
bacterial colicins, pyocins, and...; Region: HNHc;
cd00085"
/db_xref="CDD:238038"
misc_feature order(1186006..1186008,1186012..1186020,1186024..1186026,
1186066..1186071,1186081..1186086,1186093..1186095,
1186105..1186107)
/locus_tag="SF1143"
/note="active site"
/db_xref="CDD:238038"
gene 1186199..1186381
/locus_tag="SF1144"
/db_xref="GeneID:1024106"
CDS 1186199..1186381
/locus_tag="SF1144"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707054.1"
/db_xref="GeneID:1024106"
/translation="MTLMNEREQNRLIRGLIRQRDAWKTQETGHKDKASGRAERITAK
RLTDRDREVMECFRNR"
gene 1186452..1186763
/locus_tag="SF1145"
/db_xref="GeneID:1024093"
CDS 1186452..1186763
/locus_tag="SF1145"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707055.1"
/db_xref="GeneID:1024093"
/translation="MKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAA
RGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLGFDPISRRKNPPETEEEDELDRL
E"
misc_feature 1186455..1186715
/locus_tag="SF1145"
/note="Phage terminase, small subunit; Region:
Terminase_4; pfam05119"
/db_xref="CDD:461553"
gene 1186930..1188408
/locus_tag="SF1146"
/db_xref="GeneID:1024125"
CDS 1186930..1188408
/locus_tag="SF1146"
/codon_start=1
/transl_table=11
/product="terminase of prophage CP-933C"
/protein_id="NP_707056.2"
/db_xref="GeneID:1024125"
/translation="MRGRPIELEPWQQFAFACILGFKVKATGRRKYTSAFIEVPRKNA
KSTTAAILANWFLIMENGQQDIYTAAVSRDQARIVFDNARQMCLLSRPLRRRVNIQAH
KVIHPKSNSLLKPLAAKAATIEGTNPSLSIVDEYHLHPDNGVYSALELGMGARPEGLL
FAITTSGSNVVSACKQHYDYCCQILDGEEVNDSIFVLIYELDDENEVDDPAMWIKANP
NIDVSVDREKLASTIQKARGIPSQWVEMMTKRFNIWCQGTTPWMGNGAWAECAGTFTE
EDLHGQECYAGLDLSSTSDISSVCYAFPVGKTIMLISRHYLPEFQLQNPANKNRAVYR
QWAKAGWIRTTPGDCIDYDRIRDDIMQDAEKFNIRLVGFDTWNATHLRTQLQGAGFEV
EPFPQTYLRFSPAAKSFEVFVNRRVIVHRGDPVLSWSMSNVVMQSDANANIKPNKKKS
PNKIDPSVAALMAFGTFQAEHEDFAFDISDSHRQKLEEFSGV"
misc_feature 1186930..1188351
/locus_tag="SF1146"
/note="Phage terminase-like protein, large subunit,
contains N-terminal HTH domain [Mobilome: prophages,
transposons]; Region: YmfN; COG4626"
/db_xref="CDD:443665"
gene 1188422..1188703
/locus_tag="SF1147"
/db_xref="GeneID:1024078"
CDS 1188422..1188703
/locus_tag="SF1147"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707057.1"
/db_xref="GeneID:1024078"
/translation="MTEAEILRLIRRVSGISQQADEQTTQPDSVTAENYARVVAEVMR
RDGIQLNDADMRDIRIRVLEMLAYNRRVELYREKEKITYHWKKPERLRR"
gene complement(1189500..1190960)
/gene="phoQ"
/locus_tag="SF1148"
/db_xref="GeneID:1024096"
CDS complement(1189500..1190960)
/gene="phoQ"
/locus_tag="SF1148"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="sensor protein PhoQ"
/protein_id="NP_707058.1"
/db_xref="GeneID:1024096"
/translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
DKTTFRLLRGESNLFYTLAQWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
misc_feature complement(1189506..1190954)
/gene="phoQ"
/locus_tag="SF1148"
/note="two-component system sensor histidine kinase PhoQ;
Region: PRK10815"
/db_xref="CDD:182754"
gene complement(1190960..1191631)
/gene="phoP"
/locus_tag="SF1149"
/db_xref="GeneID:1024087"
CDS complement(1190960..1191631)
/gene="phoP"
/locus_tag="SF1149"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator PhoP"
/protein_id="NP_707059.1"
/db_xref="GeneID:1024087"
/translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
LFELR"
misc_feature complement(1190963..1191631)
/gene="phoP"
/locus_tag="SF1149"
/note="two-component system response regulator PhoP;
Region: PRK10816"
/db_xref="CDD:182755"
gene complement(1191800..1193170)
/gene="purB"
/locus_tag="SF1150"
/db_xref="GeneID:1025389"
CDS complement(1191800..1193170)
/gene="purB"
/locus_tag="SF1150"
/note="Code: F; COG: COG0015"
/codon_start=1
/transl_table=11
/product="adenylosuccinate lyase"
/protein_id="NP_707060.1"
/db_xref="GeneID:1025389"
/translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
QKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKE
KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQHRQLNQVEILGKINGAVGNYNAHI
AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEENRDHLLDELDHNWEVLAEPIQTV
MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
MVDELK"
misc_feature complement(1191803..1193170)
/gene="purB"
/locus_tag="SF1150"
/note="adenylosuccinate lyase; Provisional; Region:
PRK09285"
/db_xref="CDD:236452"
gene complement(1193174..1193815)
/gene="ycfC"
/locus_tag="SF1151"
/db_xref="GeneID:1024144"
CDS complement(1193174..1193815)
/gene="ycfC"
/locus_tag="SF1151"
/note="Code: R; COG: COG2915"
/codon_start=1
/transl_table=11
/product="lysogenization regulator"
/protein_id="NP_707061.2"
/db_xref="GeneID:1024144"
/translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSCQGLNAELTRYTLSLMVLERKLSSA
KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
PQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
misc_feature complement(1193189..1193815)
/gene="ycfC"
/locus_tag="SF1151"
/note="lysogenization regulator HflD; Region: PRK00218"
/db_xref="CDD:234690"
gene complement(1193851..1195002)
/gene="ycfB"
/locus_tag="SF1152"
/db_xref="GeneID:1024072"
CDS complement(1193851..1195002)
/gene="ycfB"
/locus_tag="SF1152"
/note="Code: J; COG: COG0482"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707062.3"
/db_xref="GeneID:1024072"
/translation="MIEYAALKFNVVSDPMSETAKKVIVGMSGGVDSSVSAWLLQQQG
YQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFL
AEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGL
DSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGE
RKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYV
VDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPC
TVKALDDDRIKVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
misc_feature complement(1193863..1194942)
/gene="ycfB"
/locus_tag="SF1152"
/note="tRNA U34 2-thiouridine synthase MnmA/TrmU, contains
the PP-loop ATPase domain [Translation, ribosomal
structure and biogenesis]; Region: MnmA; COG0482"
/db_xref="CDD:440250"
gene complement(1195011..1195472)
/locus_tag="SF1153"
/db_xref="GeneID:1026275"
CDS complement(1195011..1195472)
/locus_tag="SF1153"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="phosphohydrolase"
/protein_id="NP_707063.1"
/db_xref="GeneID:1026275"
/translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
CCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI"
misc_feature complement(1195050..1195457)
/locus_tag="SF1153"
/note="uncharacterized NUDIX hydrolase subfamily; Region:
NUDIX_Hydrolase; cd03675"
/db_xref="CDD:467543"
gene complement(1195482..1196105)
/gene="ymfC"
/locus_tag="SF1154"
/db_xref="GeneID:1024083"
CDS complement(1195482..1196105)
/gene="ymfC"
/locus_tag="SF1154"
/note="Code: J; COG: COG1187"
/codon_start=1
/transl_table=11
/product="23S rRNA pseudouridine(2457) synthase"
/protein_id="NP_707064.1"
/db_xref="GeneID:1024083"
/translation="MQKTSFRNHQVKRFSSQRSTRRKHENQPTRVILFNKPYDVLPQF
TDETGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQ
VEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKI
TLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD"
misc_feature complement(1195485..1196105)
/gene="ymfC"
/locus_tag="SF1154"
/note="23S rRNA pseudouridine(2457) synthase RluE; Region:
PRK11394"
/db_xref="CDD:183115"
gene 1196307..1197557
/gene="icdA"
/locus_tag="SF1155"
/db_xref="GeneID:1024104"
CDS 1196307..1197557
/gene="icdA"
/locus_tag="SF1155"
/note="Code: C; COG: COG0538"
/codon_start=1
/transl_table=11
/product="isocitrate dehydrogenase"
/protein_id="NP_707065.1"
/db_xref="GeneID:1024104"
/translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
FERLMEGAKLLKCSEFGDAIIKNM"
misc_feature 1196328..1197554
/gene="icdA"
/locus_tag="SF1155"
/note="isocitrate dehydrogenase; Reviewed; Region:
PRK07006"
/db_xref="CDD:180792"
mobile_element complement(1197649..1197891)
/note="partial"
/mobile_element_type="insertion sequence:IS1"
mobile_element complement(1197892..1198403)
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene 1198442..1199965
/locus_tag="SF1156"
/db_xref="GeneID:1024094"
CDS 1198442..1199965
/locus_tag="SF1156"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707066.2"
/db_xref="GeneID:1024094"
/translation="MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANN
INHILEEASQATQTAVNIAGKECDLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLP
GNRVLLSRIPVVPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTADVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLI
DKGFGILIFILLIASAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGT
LRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEG
FHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNIL
HENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLAR
KLSISIVAEGVETKEQLGYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE"
misc_feature 1198451..1199902
/locus_tag="SF1156"
/note="Redox-sensing c-di-GMP phosphodiesterase, contains
CSS-motif and EAL domains [Signal transduction
mechanisms]; Region: YjcC; COG4943"
/db_xref="CDD:443970"
gene 1200061..1200297
/locus_tag="SF1156a"
/db_xref="GeneID:16608316"
CDS 1200061..1200297
/locus_tag="SF1156a"
/codon_start=1
/transl_table=11
/product="membrane protein"
/protein_id="YP_008439239.1"
/db_xref="GeneID:16608316"
/translation="MFESFDRIAISSMNNSNNLDYFTLYIIFSIAFMLITLLVILIAK
PSTGLGEVLVTINLLNALVWLAINLVNRFKRKTR"
misc_feature 1200097..1200288
/locus_tag="SF1156a"
/note="cell division-associated protein YmgF; Region:
YmgF; NF041587"
/db_xref="CDD:469472"
gene 1200716..1200925
/locus_tag="SF1156b"
/db_xref="GeneID:16608317"
CDS 1200716..1200925
/locus_tag="SF1156b"
/codon_start=1
/transl_table=11
/product="ATPase"
/protein_id="YP_008439240.1"
/db_xref="GeneID:16608317"
/translation="MKLKKLPGFSLGLIALAVGNAYAEQFIQHDEYKHAVAIKDGKVK
DIDNALVITTGNGSYGYPLQERVVS"
gene 1201042..1203363
/locus_tag="SF1157"
/db_xref="GeneID:1024084"
CDS 1201042..1203363
/locus_tag="SF1157"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707067.1"
/db_xref="GeneID:1024084"
/translation="MQGKNTIVTTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFS
DGDDTFIVTAGNHAVGVLACASPGSACACVSSLDEESTADTGSNENNAIAKLDMAKGE
ITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
QGEIYTTGPDAAIAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSL
RSANEILYHKDETSNVTITDSEVSSAADVFINNIKGHLTVDATNSKITGSANISTDDN
THTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPTRLTITENYVGNNGV
LHLRTELDDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEF
IKDSRIFAGAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRP
EAGSYVANLAAANTLFVMRLNDRAGEMRYIDPVTEQERSSRLWLRQIGGHNAWRDSNG
QLRTTSHRYVSQLGGDLLTGGFTDSDSWRLGVMAGYARDYNLTHSSVSDYRSKGSVRG
YSAGLYATWFADDISKKGAYIDSWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYG
FALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRT
FIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQDGVSNLGEIKLGVNGN
LNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF"
misc_feature <1201060..1203360
/locus_tag="SF1157"
/note="intestinal colonization autotransporter adhesin
MisL; Region: PRK15313"
/db_xref="CDD:237940"
gene complement(1203420..1203755)
/locus_tag="SF1158"
/db_xref="GeneID:1024121"
CDS complement(1203420..1203755)
/locus_tag="SF1158"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707068.1"
/db_xref="GeneID:1024121"
/translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
DTMRAIGKK"
misc_feature complement(1203429..1203674)
/locus_tag="SF1158"
/note="YmgD protein; Region: YmgD; pfam16456"
/db_xref="CDD:435349"
gene complement(1203759..1204043)
/locus_tag="SF1159"
/db_xref="GeneID:1023395"
CDS complement(1203759..1204043)
/locus_tag="SF1159"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707069.2"
/db_xref="GeneID:1023395"
/translation="MADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEK
GRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK"
gene 1204613..1205023
/locus_tag="SF1160"
/db_xref="GeneID:1024138"
CDS 1204613..1205023
/locus_tag="SF1160"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439241.1"
/db_xref="GeneID:1024138"
/translation="MNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELG
ATLSYNMRLGNGMEIEPCLKAAVRKEFVDDNRVRVNSDGNFVNDLSGRRGIYQAGIKA
SFSSTLSGHFGVGYSHGAGVESPWNAVAGVNWSF"
misc_feature <1204679..1205020
/locus_tag="SF1160"
/note="outer membrane autotransporter barrel domain;
Region: autotrans_barl; TIGR01414"
/db_xref="CDD:273608"
misc_feature 1204811..1205023
/locus_tag="SF1160"
/note="Similar to Escherichia coli O157:H7 ATP-binding
component of a transport system ref: NP_311542.1 (1571
aa). BLAST with identity of 96% in 136 aa. This CDS has
been truncated. The sequence has been checked and is
believed to be correct."
gene complement(1205395..1205661)
/gene="minE"
/locus_tag="SF1161"
/db_xref="GeneID:1024127"
CDS complement(1205395..1205661)
/gene="minE"
/locus_tag="SF1161"
/note="Code: D; COG: COG0851"
/codon_start=1
/transl_table=11
/product="cell division topological specificity factor
MinE"
/protein_id="NP_707070.1"
/db_xref="GeneID:1024127"
/translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
misc_feature complement(1205404..1205661)
/gene="minE"
/locus_tag="SF1161"
/note="cell division topological specificity factor MinE;
Reviewed; Region: minE; PRK00296"
/db_xref="CDD:234718"
gene complement(1205665..1206477)
/gene="minD"
/locus_tag="SF1162"
/db_xref="GeneID:1024099"
CDS complement(1205665..1206477)
/gene="minD"
/locus_tag="SF1162"
/note="Code: D; COG: COG2894"
/codon_start=1
/transl_table=11
/product="cell division inhibitor MinD"
/protein_id="NP_707071.1"
/db_xref="GeneID:1024099"
/translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
misc_feature complement(1205668..1206477)
/gene="minD"
/locus_tag="SF1162"
/note="septum site-determining protein MinD; Region:
PRK10818"
/db_xref="CDD:182756"
gene complement(1206501..1207196)
/gene="minC"
/locus_tag="SF1163"
/db_xref="GeneID:1024130"
CDS complement(1206501..1207196)
/gene="minC"
/locus_tag="SF1163"
/note="Code: D; COG: COG0850"
/codon_start=1
/transl_table=11
/product="septum formation inhibitor"
/protein_id="NP_707072.2"
/db_xref="GeneID:1024130"
/translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALKDKIAQAPTFLK
HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
EKAPRPAPAPQAPAQNTMPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
QLVENALTVQPLN"
misc_feature complement(1206504..1207196)
/gene="minC"
/locus_tag="SF1163"
/note="Septum site-determining protein MinC [Cell cycle
control, cell division, chromosome partitioning]; Region:
MinC; COG0850"
/db_xref="CDD:440611"
mobile_element complement(1207909..1209239)
/mobile_element_type="insertion sequence:IS2"
gene complement(1207920..1208825)
/locus_tag="SF1164"
/db_xref="GeneID:1024119"
CDS complement(1207920..1208825)
/locus_tag="SF1164"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707073.1"
/db_xref="GeneID:1024119"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(1207923..1208825)
/locus_tag="SF1164"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(1208783..1209193)
/locus_tag="SF1165"
/db_xref="GeneID:1024116"
CDS complement(1208783..1209193)
/locus_tag="SF1165"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707074.3"
/db_xref="GeneID:1024116"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(1208786..1209148)
/locus_tag="SF1165"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
mobile_element 1209810..1211067
/mobile_element_type="insertion sequence:IS3"
gene 1209866..1210174
/locus_tag="SF1166"
/db_xref="GeneID:1024108"
CDS 1209866..1210174
/locus_tag="SF1166"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3 transposase InsE"
/protein_id="NP_707075.1"
/db_xref="GeneID:1024108"
/translation="MTYMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSL
YESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK
"
misc_feature 1209899..1210156
/locus_tag="SF1166"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1210171..1211025
/locus_tag="SF1167"
/db_xref="GeneID:1024131"
CDS 1210171..1211025
/locus_tag="SF1167"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3A transposase InsF"
/protein_id="NP_707076.1"
/db_xref="GeneID:1024131"
/translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ
FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF
SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM
SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG
LSPEQFEN"
misc_feature <1210171..1211019
/locus_tag="SF1167"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 1211383..1211709
/gene="ycgL"
/locus_tag="SF1168"
/db_xref="GeneID:1024128"
CDS 1211383..1211709
/gene="ycgL"
/locus_tag="SF1168"
/note="Code: S; COG: COG3100"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707077.1"
/db_xref="GeneID:1024128"
/translation="MPKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMK
GFGQPQLAMILPLDGRKKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQK
TDDTNK"
misc_feature 1211416..1211670
/gene="ycgL"
/locus_tag="SF1168"
/note="Uncharacterized conserved protein YcgL, UPF0745
family [Function unknown]; Region: YcgL; COG3100"
/db_xref="CDD:442334"
gene 1211781..1212440
/locus_tag="SF1169"
/db_xref="GeneID:1024134"
CDS 1211781..1212440
/locus_tag="SF1169"
/note="Code: Q; COG: COG0179"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707078.1"
/db_xref="GeneID:1024134"
/translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEKRQQG
TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
L"
misc_feature 1211781..1212437
/locus_tag="SF1169"
/note="fumarylacetoacetate hydrolase family protein;
Region: PRK10691"
/db_xref="CDD:182650"
gene 1212517..1212978
/gene="ycgN"
/locus_tag="SF1170"
/db_xref="GeneID:1025114"
CDS 1212517..1212978
/gene="ycgN"
/locus_tag="SF1170"
/note="Code: S; COG: COG2983"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707079.3"
/db_xref="GeneID:1025114"
/translation="MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDED
TDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLA
EGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
misc_feature 1212532..1212972
/gene="ycgN"
/locus_tag="SF1170"
/note="YcgN family cysteine cluster protein; Region:
PRK05170"
/db_xref="CDD:235356"
gene complement(1213185..1214091)
/gene="hlyE"
/locus_tag="SF1171"
/pseudo
/db_xref="GeneID:1024120"
misc_feature complement(1213185..1214091)
/gene="hlyE"
/locus_tag="SF1171"
/note="Similar to Escherichia coli K12 hemolysin E gi:
1787430 (306 aa). BLAST with identity of 98% in 302 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 1214458..1214877
/gene="umuD"
/locus_tag="SF1172"
/db_xref="GeneID:1024107"
CDS 1214458..1214877
/gene="umuD"
/locus_tag="SF1172"
/note="Code: KT; COG: COG1974"
/codon_start=1
/transl_table=11
/product="DNA polymerase V subunit UmuD"
/protein_id="NP_707080.1"
/db_xref="GeneID:1024107"
/translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
misc_feature 1214458..1214874
/gene="umuD"
/locus_tag="SF1172"
/note="translesion error-prone DNA polymerase V
autoproteolytic subunit; Region: PRK10276"
/db_xref="CDD:182350"
misc_feature order(1214635..1214637,1214746..1214748)
/gene="umuD"
/locus_tag="SF1172"
/note="Catalytic site [active]"
/db_xref="CDD:119397"
gene 1214877..1216145
/gene="umuC"
/locus_tag="SF1173"
/db_xref="GeneID:1024115"
CDS 1214877..1216145
/gene="umuC"
/locus_tag="SF1173"
/note="Code: L; COG: COG0389"
/codon_start=1
/transl_table=11
/product="DNA polymerase V subunit UmuC"
/protein_id="NP_707081.1"
/db_xref="GeneID:1024115"
/translation="MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEA
KALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE
AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT
GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF
NVMLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYTSMRQAICSYAARAAE
KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW
QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMAVMDTLNAKEGRGTLYFA
GQGIQQQWQMKRAMLSPRYTTRSSDLLRVK"
misc_feature 1214877..1216142
/gene="umuC"
/locus_tag="SF1173"
/note="translesion error-prone DNA polymerase V subunit
UmuC; Region: umuC; PRK03609"
/db_xref="CDD:179607"
misc_feature order(1214892..1214897,1214904..1214909,1215000..1215002,
1215009..1215011,1215177..1215182,1215336..1215338)
/gene="umuC"
/locus_tag="SF1173"
/note="active site"
/db_xref="CDD:176454"
misc_feature order(1215171..1215173,1215180..1215182,1215429..1215449,
1215534..1215536,1215609..1215626,1215705..1215707,
1215762..1215776,1215780..1215782)
/gene="umuC"
/locus_tag="SF1173"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:176454"
gene complement(1216191..1216721)
/gene="dsbB"
/locus_tag="SF1174"
/db_xref="GeneID:1024123"
CDS complement(1216191..1216721)
/gene="dsbB"
/locus_tag="SF1174"
/note="Code: O; COG: COG1495"
/codon_start=1
/transl_table=11
/product="disulfide bond formation protein B"
/protein_id="NP_707082.2"
/db_xref="GeneID:1024123"
/translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGMEMPQWLLGIFIAYLIVAVLV
VISQPFKAKKRDLFGR"
misc_feature complement(1216197..1216721)
/gene="dsbB"
/locus_tag="SF1174"
/note="disulfide bond formation protein DsbB; Region:
PRK01749"
/db_xref="CDD:234979"
gene complement(1216867..1218408)
/gene="nhaB"
/locus_tag="SF1175"
/db_xref="GeneID:1024112"
CDS complement(1216867..1218408)
/gene="nhaB"
/locus_tag="SF1175"
/note="Code: P; COG: COG3067"
/codon_start=1
/transl_table=11
/product="sodium/proton antiporter"
/protein_id="NP_707083.2"
/db_xref="GeneID:1024112"
/translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
FYGIYHRVASSRTEDTDLQDDSHIDKHYNVVLEQFRGFLRSLMMHAGVGTALGGVMTM
VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN
GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
WIATL"
misc_feature complement(1216879..1218408)
/gene="nhaB"
/locus_tag="SF1175"
/note="sodium/proton antiporter NhaB; Region: nhaB;
PRK09547"
/db_xref="CDD:181942"
misc_feature complement(order(1217050..1217067,1217080..1217115,
1217128..1217133,1217200..1217247,1217317..1217373,
1217416..1217460,1217482..1217520,1217614..1217622,
1217641..1217676,1217740..1217811,1217890..1217928,
1217956..1217970,1217974..1218018,1218085..1218138,
1218181..1218204))
/gene="nhaB"
/locus_tag="SF1175"
/note="transmembrane helices; other site"
/db_xref="CDD:238344"
gene 1218629..1219348
/gene="fadR"
/locus_tag="SF1176"
/db_xref="GeneID:1024109"
CDS 1218629..1219348
/gene="fadR"
/locus_tag="SF1176"
/note="Code: K; COG: COG2186"
/codon_start=1
/transl_table=11
/product="fatty acid metabolism regulator"
/protein_id="NP_707084.2"
/db_xref="GeneID:1024109"
/translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
SGEIWHRMQKNLPGDLAIQGR"
misc_feature 1218629..1219345
/gene="fadR"
/locus_tag="SF1176"
/note="fatty acid metabolism transcriptional regulator
FadR; Region: PRK04984"
/db_xref="CDD:179909"
gene complement(1219400..1220932)
/gene="ycgB"
/locus_tag="SF1177"
/db_xref="GeneID:1024118"
CDS complement(1219400..1220932)
/gene="ycgB"
/locus_tag="SF1177"
/note="Code: S; COG: COG2719"
/codon_start=1
/transl_table=11
/product="SpoVR family protein"
/protein_id="NP_707085.1"
/db_xref="GeneID:1024118"
/translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
CIAYLMEENTITMQALVMAHACYGHNSFFKNNCLFRSWTDASSIVDYLIFARKYITEC
EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
QTQVMNEGCATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYKLSNLEPNIQIWNVDLR
GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMG
NL"
misc_feature complement(1219415..1220908)
/gene="ycgB"
/locus_tag="SF1177"
/note="SpoVR family protein; Provisional; Region:
PRK11767"
/db_xref="CDD:236973"
gene 1221262..1222560
/gene="dadA"
/locus_tag="SF1178"
/db_xref="GeneID:1024136"
CDS 1221262..1222560
/gene="dadA"
/locus_tag="SF1178"
/note="Code: E; COG: COG0665"
/codon_start=1
/transl_table=11
/product="D-amino acid dehydrogenase small subunit"
/protein_id="NP_707086.2"
/db_xref="GeneID:1024136"
/translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA
GVPYQLLESSRLAEVDPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF
RFNTPVDQLLCDGEQIYGVKFGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS
LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGSTRFKNLWLNTGHGTLGWTMACGSGQ
LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
misc_feature 1221262..1222506
/gene="dadA"
/locus_tag="SF1178"
/note="D-amino acid dehydrogenase; Region: PRK00711"
/db_xref="CDD:234819"
gene 1222570..1223640
/gene="dadX"
/locus_tag="SF1179"
/db_xref="GeneID:1024156"
CDS 1222570..1223640
/gene="dadX"
/locus_tag="SF1179"
/note="Code: M; COG: COG0787"
/codon_start=1
/transl_table=11
/product="alanine racemase"
/protein_id="NP_707087.1"
/db_xref="GeneID:1024156"
/translation="MTRPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIE
RIWSALGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHS
NWQLKALQNARLKAPLDIYLKVNSGMNRLGFQSDRVLTVWQQLRAMANVGEMTLMSHF
AEAEHPDGISGAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPS
GQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGY
PRHAPTGAPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAA
AAGTVGYELMCALALRVPVVTV"
misc_feature 1222573..1223637
/gene="dadX"
/locus_tag="SF1179"
/note="catabolic alanine racemase; Region: dadX; PRK03646"
/db_xref="CDD:179622"
misc_feature order(1222666..1222668,1222672..1222674,1222684..1222686,
1222804..1222806,1222936..1222938,1222957..1222959,
1223038..1223040,1223044..1223046,1223140..1223148,
1223188..1223199,1223590..1223592)
/gene="dadX"
/locus_tag="SF1179"
/note="active site"
/db_xref="CDD:143500"
misc_feature order(1222666..1222668,1222672..1222674,1222684..1222686,
1222804..1222806,1223044..1223046,1223140..1223145,
1223188..1223190,1223194..1223199,1223590..1223592)
/gene="dadX"
/locus_tag="SF1179"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143500"
misc_feature order(1222672..1222674,1222684..1222686,1222957..1222959,
1223044..1223046,1223590..1223592)
/gene="dadX"
/locus_tag="SF1179"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143500"
misc_feature order(1222672..1222674,1223326..1223328)
/gene="dadX"
/locus_tag="SF1179"
/note="catalytic residues [active]"
/db_xref="CDD:143500"
misc_feature order(1223287..1223289,1223296..1223298,1223314..1223319,
1223323..1223331,1223368..1223370,1223383..1223385,
1223401..1223403,1223467..1223469,1223473..1223475,
1223584..1223586,1223590..1223595,1223608..1223610,
1223617..1223619)
/gene="dadX"
/locus_tag="SF1179"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143500"
gene complement(1223808..1225106)
/locus_tag="SF1180"
/pseudogene="unknown"
/db_xref="GeneID:1024124"
gene complement(1225833..1227443)
/locus_tag="SF1181"
/db_xref="GeneID:1026283"
CDS complement(1225833..1227443)
/locus_tag="SF1181"
/note="Code: P; COG: COG0025"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707089.4"
/db_xref="GeneID:1026283"
/translation="MLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFR
VALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGK
GLNERVGSTLEIESGSNDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIG
LGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRP
IRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSV
FAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSL
LLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENLWEQFVYQLSADKWCVGAALRD
LHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALD
QRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFA
GMIWTVAEKEDNEVLKIGVRVAEEEAES"
misc_feature complement(1225857..1227443)
/locus_tag="SF1181"
/note="potassium/proton antiporter; Region: PRK05326"
/db_xref="CDD:235410"
gene complement(1227664..1228560)
/gene="ldcA"
/locus_tag="SF1182"
/db_xref="GeneID:1024153"
CDS complement(1227664..1228560)
/gene="ldcA"
/locus_tag="SF1182"
/note="Code: S; COG: COG1619"
/codon_start=1
/transl_table=11
/product="L,D-carboxypeptidase A"
/protein_id="NP_707090.1"
/db_xref="GeneID:1024153"
/translation="MPHRGYSIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTE
TERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDF
TAIQCGLLAQGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTC
QTEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINVHPFRVERMLLQLYHAGILPR
QKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAH
AILNNTREGAQLTISGHPVLKM"
misc_feature complement(1227667..1228548)
/gene="ldcA"
/locus_tag="SF1182"
/note="L,D-carboxypeptidase A; Provisional; Region: ldcA;
PRK11253"
/db_xref="CDD:183059"
misc_feature complement(order(1227817..1227822,1227934..1227939,
1227946..1227951,1227955..1227960,1228024..1228029,
1228033..1228038,1228336..1228341))
/gene="ldcA"
/locus_tag="SF1182"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132882"
misc_feature complement(order(1227769..1227771,1227979..1227981,
1228261..1228263))
/gene="ldcA"
/locus_tag="SF1182"
/note="catalytic triad [active]"
/db_xref="CDD:132882"
gene 1228631..1229290
/gene="mltE"
/locus_tag="SF1183"
/db_xref="GeneID:1024114"
CDS 1228631..1229290
/gene="mltE"
/locus_tag="SF1183"
/note="Code: M; COG: COG0741"
/codon_start=1
/transl_table=11
/product="lytic murein endotransglycosylase E"
/protein_id="NP_707091.1"
/db_xref="GeneID:1024114"
/translation="MPVVTLTGIPGYTGLRIEIDMVCLFDWLLAGCSSKHDYTNPPWN
AKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKAS
TSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVV
SYANGAGALLRTFSSDRKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDA
M"
misc_feature 1228712..1229287
/gene="mltE"
/locus_tag="SF1183"
/note="membrane-bound lytic murein transglycosylase EmtA;
Region: emtA; PRK15470"
/db_xref="CDD:185367"
gene complement(1229292..1230026)
/gene="ycgR"
/locus_tag="SF1184"
/db_xref="GeneID:1024113"
CDS complement(1229292..1230026)
/gene="ycgR"
/locus_tag="SF1184"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707092.1"
/db_xref="GeneID:1024113"
/translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
AELQEGMRFAQIEVNMGQWGVFHFDAQLISTSERKVIDGKNETITTPRLSFRFLNVSP
TVERQLQRIIFSLEREAREKADKVRD"
misc_feature complement(1229310..1229939)
/gene="ycgR"
/locus_tag="SF1184"
/note="Cyclic di-GMP-binding flagellar brake protein
FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell
motility]; Region: YcgR; COG5581"
/db_xref="CDD:444320"
gene 1230194..1230481
/locus_tag="SF1185"
/db_xref="GeneID:1024157"
CDS 1230194..1230481
/locus_tag="SF1185"
/note="Code: S; COG: COG2261"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707093.1"
/db_xref="GeneID:1024157"
/translation="MRPIHRNEGLNMGIIAWIIFGLIAGIIGKLIMPGRDGGGFFLTC
ILGIVGAVVGGWLATMFGIDGSISGFNLHSFLVAVVGAILVLGVFRLLRRE"
misc_feature 1230227..1230475
/locus_tag="SF1185"
/note="Uncharacterized membrane protein YeaQ/YmgE,
transglycosylase-associated protein family [General
function prediction only]; Region: YeaQ; COG2261"
/db_xref="CDD:441862"
gene 1230618..1231133
/gene="mltE"
/locus_tag="SF1186"
/db_xref="GeneID:1024150"
CDS 1230618..1231133
/gene="mltE"
/locus_tag="SF1186"
/note="Code: M; COG: COG0741"
/codon_start=1
/transl_table=11
/product="lytic murein endotransglycosylase E"
/protein_id="NP_707094.1"
/db_xref="GeneID:1024150"
/translation="MQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSN
AIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIED
PKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLDHVARNHPAPQAPRY
IYKLEQALDAM"
misc_feature 1230618..1231130
/gene="mltE"
/locus_tag="SF1186"
/note="membrane-bound lytic murein transglycosylase EmtA;
Region: emtA; PRK15470"
/db_xref="CDD:185367"
gene complement(1231135..1231869)
/locus_tag="SF1187"
/db_xref="GeneID:1024162"
CDS complement(1231135..1231869)
/locus_tag="SF1187"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707095.1"
/db_xref="GeneID:1024162"
/translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
AELQEGMRFAQIEVNMGQWGVFHFDAQLISTSERKVIDGKNETITTPRLSFRFLNVSP
TVERQLQRIIFSLEREAREKADKVRD"
misc_feature complement(1231153..1231782)
/locus_tag="SF1187"
/note="Cyclic di-GMP-binding flagellar brake protein
FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains [Cell
motility]; Region: YcgR; COG5581"
/db_xref="CDD:444320"
gene 1232070..1232324
/gene="ymgE"
/locus_tag="SF1188"
/db_xref="GeneID:1024097"
CDS 1232070..1232324
/gene="ymgE"
/locus_tag="SF1188"
/note="Code: S; COG: COG2261"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707096.2"
/db_xref="GeneID:1024097"
/translation="MGIIAWIIFGLIAGIIGKLIMPGRDGGGFFLTCILGIVGAVVGG
WLATMFGIDGSISGFNLHSFLVAVVGAILVLGVFRLLRRE"
misc_feature 1232070..1232318
/gene="ymgE"
/locus_tag="SF1188"
/note="Uncharacterized membrane protein YeaQ/YmgE,
transglycosylase-associated protein family [General
function prediction only]; Region: YeaQ; COG2261"
/db_xref="CDD:441862"
gene complement(1232374..1234349)
/gene="prrA"
/locus_tag="SF1189"
/pseudo
/db_xref="GeneID:1024161"
misc_feature complement(1232374..1234349)
/gene="prrA"
/locus_tag="SF1189"
/note="'Similar to Escherichia coli O157:H7 EDL933 outer
membrane receptor, probably tonB dependent ref:
NP_287437.1 (656 aa). BLAST with identity of 98% in 659
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct.'"
/pseudo
gene complement(1234354..1235208)
/gene="modD"
/locus_tag="SF1190"
/db_xref="GeneID:1024172"
CDS complement(1234354..1235208)
/gene="modD"
/locus_tag="SF1190"
/note="Code: H; COG: COG0157"
/codon_start=1
/transl_table=11
/product="molybdenum transport protein ModD"
/protein_id="NP_707097.2"
/db_xref="GeneID:1024172"
/translation="MIFLSQAQIDALLLEDIQGGDLTTRALNIGHQPGYIAFFHRQGG
CVSGVSVACKMLTTLGLTIDDAVSDGSQANAGQRLIRAQGNAAALHQGWKAVQNVLEW
SCGVSDYLAQMLALLRERYPDGNIACTRKAIPGTRLLASQAILAAGGLIHRAGCAETI
LLFANHRHFLHDNQGWSGAIAQLRRHAPEKKIVVEADTPKEAIAALRAQPDVLQLDKF
SPQQATEIAQIAPSLAPHCTLALTGGINLTTLKNYLDCGIRLFITSAPYYAAPADIKV
SLQPTASI"
misc_feature complement(1234357..1235208)
/gene="modD"
/locus_tag="SF1190"
/note="molybdenum transport protein ModD; Provisional;
Region: PRK06096"
/db_xref="CDD:180397"
gene complement(1235208..1236017)
/locus_tag="SF1191"
/db_xref="GeneID:1024166"
CDS complement(1235208..1236017)
/locus_tag="SF1191"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707098.1"
/db_xref="GeneID:1024166"
/translation="MLIDDIDFADLYLQQLKLAHRTEKTPDHWDQRAEKMAENCASPT
DSYLQQLIAKIDLQGAQTLFDMGCGPGTVSLALADKLTTVYGVDYSQGMLNVAARRAA
ALKADNVHWIQRAWEEDWSDLPRCDIAVASRSTLVADMRHAMSKLNNQARLRVYTTHL
VSTSFVSPAIQRAAGREVIELPNYIFALNVLYQMGIYAHVDFIRGQNCQQDNSTWERF
EQNVSWSLGALNDDERERLYHWYQQQDARALAPASRDWALIWWDSVPQEAL"
misc_feature complement(<1235577..1235873)
/locus_tag="SF1191"
/note="Ubiquinone/menaquinone biosynthesis C-methylase
UbiE/MenG [Coenzyme transport and metabolism]; Region:
UbiE; COG2226"
/db_xref="CDD:441828"
gene complement(1236027..1236785)
/locus_tag="SF1192"
/db_xref="GeneID:1024140"
CDS complement(1236027..1236785)
/locus_tag="SF1192"
/note="Code: PH; COG: COG1120"
/codon_start=1
/transl_table=11
/product="ferric enterobactin ABC transporter ATP-binding
protein"
/protein_id="NP_707099.1"
/db_xref="GeneID:1024140"
/translation="MTLLAVRHASLGYSRHPVLRDVSFTLSQGTICCLLGANGCGKTT
LMRSILGVIPLLKGEILLDSLSVQTLSHRQRAQAIAWVPQAHDGIFAFSVLDMVLMGL
APTIGAFSVPGKQERLKATEQLEKLGILHLATRRWNTLSGGERQLALIARALVQQPRL
LLLDEPASSLDFGHQIQLLDTLAQLKNNGMTMLMSTHHTLHANAIADSIIQVEPDGRV
TQGLPTEQLTTNKLAALYRVSADQIHHHLSAISR"
misc_feature complement(1236042..1236779)
/locus_tag="SF1192"
/note="ABC-type cobalamin/Fe3+-siderophores transport
system, ATPase component [Inorganic ion transport and
metabolism, Coenzyme transport and metabolism]; Region:
FepC; COG1120"
/db_xref="CDD:440737"
gene complement(1236782..1237762)
/locus_tag="SF1193"
/db_xref="GeneID:1024139"
CDS complement(1236782..1237762)
/locus_tag="SF1193"
/note="Code: PH; COG: COG0609"
/codon_start=1
/transl_table=11
/product="iron ABC transporter permease"
/protein_id="NP_707100.1"
/db_xref="GeneID:1024139"
/translation="MRIVNGCILLLAAISITFAAVSGAYHLDMQQLLALILRQENESV
QEQIVFWQIRVPRILAALLLGAALAGAGTTYQGMLRNPLVSPDILGVSAGAGLGACAA
ILWGLPIVYIQLYAFCGGLMVVAGVWLITRRVTRHDPILTLVLVGIALGTLCGAGISL
IKTLADPYTQLPSITFWLLGGLSTVTLRDLCYAAPIILIGSLPLFFLRWRMNLLTLSD
DEARSLGLNVTRLRFGLIVCATLITASTVAIAGIIGWIGLVVPHIARLLTGHNHQQLL
PMAMCTGAILLLLTDTLARSIGTTEIPLGILTAFVGAPFFLLLLLRGGRQ"
misc_feature complement(1236821..1237696)
/locus_tag="SF1193"
/note="ABC-type Fe3+-siderophore transport system,
permease component [Inorganic ion transport and
metabolism]; Region: FepD; COG0609"
/db_xref="CDD:440374"
gene complement(1237762..1238784)
/locus_tag="SF1194"
/db_xref="GeneID:1024159"
CDS complement(1237762..1238784)
/locus_tag="SF1194"
/note="Code: P; COG: COG0614"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_707101.2"
/db_xref="GeneID:1024159"
/translation="MPITRRTFAQALASTLLLQSLPSFSQTVNRFASQSLPEAQNITR
IVSAGAPADLLLLAVAPEKMVGFSSFDFARQALIPLPEHIRQLPRLGRLAGRASTLSL
EGLMALHPDLVVDCGNTDETLISQARQVSEQTQIPWLLLNGKLAQSAEQLTTLGKTLG
EEHRAAEQANLASHFVGEAQAFATSPAANLRFYAARGPRGLETGLQGSLHTEAAELLG
LHNVAQIADRHGLTQVSMENLLRWQPDIILVQEAVTADFIRRDPLWQGVKAVAEQRIL
FLSGLPFGWLDAPPGINRLLGLRRLHAWLDPAINRQFKSDMQHYAQLFWHCSLSDADY
QKLVAS"
misc_feature complement(1237918..1238673)
/locus_tag="SF1194"
/note="Metal binding protein HemV-2. These proteins are
predicted to function as initial receptors in ABC
transport of metal ions. They belong to the TroA
superfamily of helical backbone metal receptor proteins
that share a distinct fold and ligand binding...; Region:
HemV-2; cd01147"
/db_xref="CDD:238567"
misc_feature complement(1238530..1238532)
/locus_tag="SF1194"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:238567"
gene 1239104..1239562
/locus_tag="SF1195"
/db_xref="GeneID:1024151"
CDS 1239104..1239562
/locus_tag="SF1195"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707102.1"
/db_xref="GeneID:1024151"
/translation="MNILLTEVKRMLGVIQNLCCCRPDSPLADSKQRNQKLPQQDFED
FKNDVINVINNNEDIYFLRESNLLNAFIRTCKKRDDNSYGNMIFTLYFDNDIYGNRII
KASLNGGELQLLSTGCSNDNILHFGNDSNLLIVFYVQIMPDDLVMQLHRF"
mobile_element complement(1239482..1240250)
/mobile_element_type="insertion sequence:IS1"
gene complement(1239920..1240195)
/gene="insA"
/locus_tag="SF1197"
/db_xref="GeneID:1024146"
CDS complement(1239920..1240195)
/gene="insA"
/locus_tag="SF1197"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707104.1"
/db_xref="GeneID:1024146"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1239923..1240174)
/gene="insA"
/locus_tag="SF1197"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
mobile_element 1240514..1241842
/mobile_element_type="insertion sequence:iso-IS10R"
gene 1240621..1241829
/locus_tag="SF1198"
/db_xref="GeneID:1026292"
CDS 1240621..1241829
/locus_tag="SF1198"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_707105.1"
/db_xref="GeneID:1026292"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature 1240735..1241790
/locus_tag="SF1198"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene 1241967..1242406
/gene="ycgY"
/locus_tag="SF1199"
/pseudo
/db_xref="GeneID:1024141"
misc_feature 1241967..1242406
/gene="ycgY"
/locus_tag="SF1199"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787446 (147 aa). BLAST with
identity of 99% in 147 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1242485..1244182)
/gene="treA"
/locus_tag="SF1200"
/db_xref="GeneID:1024133"
CDS complement(1242485..1244182)
/gene="treA"
/locus_tag="SF1200"
/note="Code: G; COG: COG1626"
/codon_start=1
/transl_table=11
/product="trehalase"
/protein_id="NP_707106.2"
/db_xref="GeneID:1024133"
/translation="MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILL
GPLFNDVQNVKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPK
EGEKYVPPEGQSLREHIDGLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWD
NYFTMLGLAESGHWDKVADMVANFAHEINTYGHIPNGNRSYYLSRSQPPFFALMVELL
AQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDSTLLNRYWDDRDTP
RPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVP
VDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDL
KSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAP
NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGG
GGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATHPTVKSATTQPSTKEAQPTP"
misc_feature complement(1242488..1244182)
/gene="treA"
/locus_tag="SF1200"
/note="alpha,alpha-trehalase TreA; Region: treA; PRK13271"
/db_xref="CDD:237326"
gene complement(1244502..1245920)
/gene="ycgC"
/locus_tag="SF1201"
/db_xref="GeneID:1026300"
CDS complement(1244502..1245920)
/gene="ycgC"
/locus_tag="SF1201"
/codon_start=1
/transl_table=11
/product="dihydroxyacetone kinase subunit M"
/protein_id="NP_707107.2"
/db_xref="GeneID:1026300"
/translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVE
GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPPYDEEARSLAV
VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
AKGPEAEEALIAFRHLAEDNFGETEEVAPPTLRPVLPVSGKAFYYQPVLCTVQAKSTL
TAEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLGDPELLAAASEL
LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
YAIQPEETLTLDVKTQRFNRQG"
misc_feature complement(1244505..1245920)
/gene="ycgC"
/locus_tag="SF1201"
/note="dihydroxyacetone kinase subunit M; Provisional;
Region: PRK11377"
/db_xref="CDD:183108"
gene complement(1245931..1246563)
/locus_tag="SF1202"
/db_xref="GeneID:1024135"
CDS complement(1245931..1246563)
/locus_tag="SF1202"
/note="Code: G; COG: COG2376"
/codon_start=1
/transl_table=11
/product="dihydroxyacetone kinase subunit DhaL"
/protein_id="NP_707108.2"
/db_xref="GeneID:1024135"
/translation="MSLSRTQIVNWLTRCGDIFNTESEYLTGLDREIGDADHGLNMNR
GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS
IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
misc_feature complement(1245934..1246563)
/locus_tag="SF1202"
/note="dihydroxyacetone kinase ADP-binding subunit DhaL;
Region: PRK10005"
/db_xref="CDD:182192"
gene complement(1246574..1247674)
/locus_tag="SF1203"
/db_xref="GeneID:1024137"
CDS complement(1246574..1247674)
/locus_tag="SF1203"
/note="Code: G; COG: COG2376"
/codon_start=1
/transl_table=11
/product="dihydroxyacetone kinase subunit DhaK"
/protein_id="NP_707109.2"
/db_xref="GeneID:1024137"
/translation="MPYRNCWSKIMKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVY
VTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECSMQ
IDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGV
ANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLAD
NEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFDTLLEHGSYHRTLRFWDYQQGSWQEEP
QTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLD
MTGFSITLLKVDDETLALWDAPVHTPALNWGK"
misc_feature complement(1246577..1247644)
/locus_tag="SF1203"
/note="dihydroxyacetone kinase subunit DhaK; Provisional;
Region: PRK11468"
/db_xref="CDD:183150"
gene 1247863..1249791
/locus_tag="SF1204"
/db_xref="GeneID:1024158"
CDS 1247863..1249791
/locus_tag="SF1204"
/note="Code: Q; COG: COG3284"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator DhaR"
/protein_id="NP_707110.1"
/db_xref="GeneID:1024158"
/translation="MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGV
TFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSA
LGFNDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRL
TGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDG
VISWDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKLAHPLKHVEA
TFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDD
PQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGD
AALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITR
LDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPAL
VNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSD
LPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTL
WRKMKQHGIDAGQFKRRV"
misc_feature 1247872..1249785
/locus_tag="SF1204"
/note="DNA-binding transcriptional regulator DhaR;
Provisional; Region: PRK11388"
/db_xref="CDD:183114"
gene complement(1249891..1252758)
/locus_tag="SF1205"
/db_xref="GeneID:1024188"
CDS complement(1249891..1252758)
/locus_tag="SF1205"
/codon_start=1
/transl_table=11
/product="adhesion and penetration protein"
/protein_id="NP_707111.1"
/db_xref="GeneID:1024188"
/translation="MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLL
IAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVND
ASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG
IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNN
ANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSA
NALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSSSDATINFSGTAAQRNS
IFSGGSYGASAQTATAVINMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGA
RGIYAMTNSQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKG
GLINLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFAS
HGSTAGTFTTLNVENLSGNSTFIMRADVVGEGNGVNNRGDLLNISGSSAGNHVLAIRN
QGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNGTNWELYASGTVPEPT
PNPEPTPAPAQPPIVNPDPTPEPAPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRM
GDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSGIQFGGDKRLSDVMPLYVGLY
IDSTHASPDYSGGDGTARSDYMGMYASYMAQNGFYSDLVIKASRQKNSFHVLDSQNNG
VNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQNEMAMKASNGLNIHLN
HYESLLGRASMILGYDITAGNSQLNVYVKTGAIREFSGDTEYLLNDSREKYSFKGNGW
NNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF"
misc_feature complement(<1250917..1252602)
/locus_tag="SF1205"
/note="intestinal colonization autotransporter adhesin
MisL; Region: PRK15313"
/db_xref="CDD:237940"
misc_feature complement(1250899..1251630)
/locus_tag="SF1205"
/note="Pertactin-like passenger domains (virulence
factors), C-terminal, subgroup 1, of autotransporter
proteins of the type V secretion system of Gram-negative
bacteria. This subgroup includes the passenger domains of
Neisseria and Haemophilus IgA1 proteases; Region:
PL1_Passenger_AT; cd01343"
/db_xref="CDD:238653"
misc_feature complement(1249894..1251225)
/locus_tag="SF1205"
/note="outer membrane autotransporter barrel domain;
Region: autotrans_barl; TIGR01414"
/db_xref="CDD:273608"
gene 1253103..1253306
/locus_tag="SF1205a"
/db_xref="GeneID:16608318"
CDS 1253103..1253306
/locus_tag="SF1205a"
/codon_start=1
/transl_table=11
/product="membrane protein"
/protein_id="YP_008439242.1"
/db_xref="GeneID:16608318"
/translation="MYLHNKNNMRHFCITNKKKQKTSIFIFVQWIFWPIVIIVLLVII
FILPGSHVITLFGDFICGILPFR"
gene complement(1253602..1254693)
/gene="ychF"
/locus_tag="SF1206"
/db_xref="GeneID:1024185"
CDS complement(1253602..1254693)
/gene="ychF"
/locus_tag="SF1206"
/note="Code: R; COG: COG0012"
/codon_start=1
/transl_table=11
/product="GTP-binding protein YchF"
/protein_id="NP_707112.1"
/db_xref="GeneID:1024185"
/translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
misc_feature complement(1253605..1254687)
/gene="ychF"
/locus_tag="SF1206"
/note="Ribosome-binding ATPase YchF, GTP1/OBG family
[Translation, ribosomal structure and biogenesis]; Region:
GTP1; COG0012"
/db_xref="CDD:439783"
gene complement(1254810..1255394)
/gene="pth"
/locus_tag="SF1207"
/db_xref="GeneID:1024197"
CDS complement(1254810..1255394)
/gene="pth"
/locus_tag="SF1207"
/note="Code: J; COG: COG0193"
/codon_start=1
/transl_table=11
/product="peptidyl-tRNA hydrolase"
/protein_id="NP_707113.1"
/db_xref="GeneID:1024197"
/translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK
FFGYTSRVTLGSEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
misc_feature complement(1254825..1255388)
/gene="pth"
/locus_tag="SF1207"
/note="Peptidyl-tRNA hydrolase [Translation, ribosomal
structure and biogenesis]; Region: Pth; COG0193"
/db_xref="CDD:439963"
gene 1255672..1255950
/gene="ychH"
/locus_tag="SF1208"
/db_xref="GeneID:1024148"
CDS 1255672..1255950
/gene="ychH"
/locus_tag="SF1208"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707114.1"
/db_xref="GeneID:1024148"
/translation="MKRKNASILGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
misc_feature 1255672..1255947
/gene="ychH"
/locus_tag="SF1208"
/note="stress response protein YchH; Region: PRK10692"
/db_xref="CDD:182651"
gene complement(1256005..1257657)
/gene="ychM"
/locus_tag="SF1209"
/db_xref="GeneID:1023361"
CDS complement(1256005..1257657)
/gene="ychM"
/locus_tag="SF1209"
/note="Code: P; COG: COG0659"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707115.2"
/db_xref="GeneID:1023361"
/translation="MPFRALIDVCWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIG
SGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLL
SGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQ
KVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLG
GHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSM
AMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATAAIARSAANV
RAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLLR
HAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVVVDVPDDV
LVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPE
GCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL"
misc_feature complement(1256008..1257657)
/gene="ychM"
/locus_tag="SF1209"
/note="putative transporter; Provisional; Region:
PRK11660"
/db_xref="CDD:183265"
gene complement(1257809..1258756)
/gene="prsA"
/locus_tag="SF1210"
/db_xref="GeneID:1024194"
CDS complement(1257809..1258756)
/gene="prsA"
/locus_tag="SF1210"
/note="Code: FE; COG: COG0462"
/codon_start=1
/transl_table=11
/product="ribose-phosphate pyrophosphokinase"
/protein_id="NP_707116.2"
/db_xref="GeneID:1024194"
/translation="MPDMKLFAGNATPVLAQRIANRLYTSLGDAAVGRFSDGEVSVQI
NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
misc_feature complement(1257815..1258747)
/gene="prsA"
/locus_tag="SF1210"
/note="ribose-phosphate diphosphokinase; Region: PRK01259"
/db_xref="CDD:234929"
gene complement(1258907..1259758)
/gene="ipk"
/locus_tag="SF1211"
/db_xref="GeneID:1024154"
CDS complement(1258907..1259758)
/gene="ipk"
/locus_tag="SF1211"
/note="Code: I; COG: COG1947"
/codon_start=1
/transl_table=11
/product="4-diphosphocytidyl-2C-methyl-D-erythritol
kinase"
/protein_id="NP_707117.1"
/db_xref="GeneID:1024154"
/translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE
LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG
GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
PLHRAML"
misc_feature complement(1258910..1259758)
/gene="ipk"
/locus_tag="SF1211"
/note="4-diphosphocytidyl-2C-methyl-D-erythritol kinase;
Region: ispE; TIGR00154"
/db_xref="CDD:188029"
gene complement(1259758..1260381)
/gene="lolB"
/locus_tag="SF1212"
/db_xref="GeneID:1024152"
CDS complement(1259758..1260381)
/gene="lolB"
/locus_tag="SF1212"
/note="Code: M; COG: COG3017"
/codon_start=1
/transl_table=11
/product="molecular chaperone LolB"
/protein_id="NP_707118.1"
/db_xref="GeneID:1024152"
/translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ
DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI
TYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK"
misc_feature complement(1259764..1260369)
/gene="lolB"
/locus_tag="SF1212"
/note="outer membrane lipoprotein LolB; Region: lolB;
TIGR00548"
/db_xref="CDD:129639"
misc_feature complement(order(1259770..1259772,1259779..1259781,
1259785..1259787,1259791..1259793,1259812..1259814,
1259818..1259820,1259827..1259829,1259863..1259865,
1259869..1259871,1259902..1259904,1260067..1260069,
1260073..1260075,1260094..1260096,1260100..1260102,
1260127..1260129,1260133..1260135,1260163..1260165,
1260169..1260171,1260175..1260177,1260202..1260204,
1260208..1260210,1260214..1260216,1260220..1260222))
/gene="lolB"
/locus_tag="SF1212"
/note="hydrophobic core; other site"
/db_xref="CDD:319984"
misc_feature complement(1260115..1260117)
/gene="lolB"
/locus_tag="SF1212"
/note="lipid binding site [chemical binding];
lipid-binding site"
/db_xref="CDD:319984"
gene 1260595..1261851
/gene="hemA"
/locus_tag="SF1213"
/db_xref="GeneID:1024143"
CDS 1260595..1261851
/gene="hemA"
/locus_tag="SF1213"
/note="Code: H; COG: COG0373"
/codon_start=1
/transl_table=11
/product="glutamyl-tRNA reductase"
/protein_id="NP_707119.2"
/db_xref="GeneID:1024143"
/translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
VASGLDSLVLGEPQILGQVKKAFVDSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
AQILADEVGAEVIALSEIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA
WLRAQSASETIREYRSQAEHVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
TKSLQQAARDGDNERLNILRDSLGLE"
misc_feature 1260595..1261848
/gene="hemA"
/locus_tag="SF1213"
/note="glutamyl-tRNA reductase; Reviewed; Region: hemA;
PRK00045"
/db_xref="CDD:234592"
gene 1261893..1262975
/gene="prfA"
/locus_tag="SF1214"
/db_xref="GeneID:1027801"
CDS 1261893..1262975
/gene="prfA"
/locus_tag="SF1214"
/note="Code: J; COG: COG0216"
/codon_start=1
/transl_table=11
/product="peptide chain release factor 1"
/protein_id="NP_707120.1"
/db_xref="GeneID:1027801"
/translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLP
KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
GKLDMLIEPIIQEHQADQLAALSEQE"
misc_feature 1261902..1262963
/gene="prfA"
/locus_tag="SF1214"
/note="Protein chain release factor RF1 [Translation,
ribosomal structure and biogenesis]; Region: PrfA;
COG0216"
/db_xref="CDD:439986"
gene 1262975..1263808
/gene="hemK"
/locus_tag="SF1215"
/db_xref="GeneID:1024180"
CDS 1262975..1263808
/gene="hemK"
/locus_tag="SF1215"
/note="Code: J; COG: COG2890"
/codon_start=1
/transl_table=11
/product="N5-glutamine S-adenosyl-L-methionine-dependent
methyltransferase"
/protein_id="NP_707121.1"
/db_xref="GeneID:1024180"
/translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE
TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQA
LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN
IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
Q"
misc_feature 1262975..1263805
/gene="hemK"
/locus_tag="SF1215"
/note="HemK family putative methylases; Region: hemK_fam;
TIGR00536"
/db_xref="CDD:273125"
gene 1263805..1264197
/locus_tag="SF1216"
/db_xref="GeneID:1024178"
CDS 1263805..1264197
/locus_tag="SF1216"
/note="Code: S; COG: COG3094"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707122.1"
/db_xref="GeneID:1024178"
/translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
ARIIAFPLALVVLYIIIKLATTKVPLLG"
misc_feature 1263805..1264194
/locus_tag="SF1216"
/note="SirB family protein; Region: PRK10278"
/db_xref="CDD:182351"
gene 1264201..1265010
/gene="ychA"
/locus_tag="SF1217"
/db_xref="GeneID:1024155"
CDS 1264201..1265010
/gene="ychA"
/locus_tag="SF1217"
/note="Code: S; COG: COG2912"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707123.1"
/db_xref="GeneID:1024155"
/translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG
AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDGWLKGNI
SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
RDRGLIYAQLDCEHVALNDLSYFVERCPEDPISEMIRAQINNIAHKHIVLH"
misc_feature 1264201..1265007
/gene="ychA"
/locus_tag="SF1217"
/note="tetratricopeptide repeat-containing protein;
Region: PRK10941"
/db_xref="CDD:182854"
misc_feature 1264759..1264830
/gene="ychA"
/locus_tag="SF1217"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276810"
misc_feature 1264840..1264932
/gene="ychA"
/locus_tag="SF1217"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276810"
gene 1265046..1265900
/gene="kdsA"
/locus_tag="SF1218"
/db_xref="GeneID:1024177"
CDS 1265046..1265900
/gene="kdsA"
/locus_tag="SF1218"
/note="Code: M; COG: COG2877"
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxyphosphooctonate aldolase"
/protein_id="NP_707124.1"
/db_xref="GeneID:1024177"
/translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
FEELDTSK"
misc_feature 1265070..1265867
/gene="kdsA"
/locus_tag="SF1218"
/note="2-dehydro-3-deoxyphosphooctonate aldolase;
Provisional; Region: PRK05198"
/db_xref="CDD:235363"
gene complement(1266049..1266216)
/locus_tag="SF1218a"
/db_xref="GeneID:16608319"
CDS complement(1266049..1266216)
/locus_tag="SF1218a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439243.1"
/db_xref="GeneID:16608319"
/translation="MKPDTSRIAAKMLSLQQGGYMTLAQFAMTFWHDLAAPILAGIIA
AAIVSWWRNRK"
misc_feature complement(1266052..1266156)
/locus_tag="SF1218a"
/note="Toxin Ldr, type I toxin-antitoxin system; Region:
Ldr_toxin; pfam13940"
/db_xref="CDD:404772"
gene complement(1266562..1267662)
/gene="chaA"
/locus_tag="SF1219"
/db_xref="GeneID:1024182"
CDS complement(1266562..1267662)
/gene="chaA"
/locus_tag="SF1219"
/note="Code: P; COG: COG0387"
/codon_start=1
/transl_table=11
/product="calcium/sodium:proton antiporter"
/protein_id="NP_707125.1"
/db_xref="GeneID:1024182"
/translation="MSNAQEAVKTRHKETSLIFPVLVLVVLFLWGSSQTLPVVIAINL
LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
LPAANFSTGQALLVALISAAMYGVFLLIQAKTHQSLFVYEHEDDSDDDDPHHGKTSAH
SSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV
LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
misc_feature complement(1266565..1267662)
/gene="chaA"
/locus_tag="SF1219"
/note="sodium-potassium/proton antiporter ChaA; Region:
PRK10599"
/db_xref="CDD:182580"
gene 1267931..1268161
/gene="chaB"
/locus_tag="SF1220"
/db_xref="GeneID:1024189"
CDS 1267931..1268161
/gene="chaB"
/locus_tag="SF1220"
/codon_start=1
/transl_table=11
/product="cation transport regulator"
/protein_id="NP_707126.1"
/db_xref="GeneID:1024189"
/translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRD
DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
misc_feature 1267931..1268155
/gene="chaB"
/locus_tag="SF1220"
/note="Cation transport regulator ChaB [Inorganic ion
transport and metabolism]; Region: ChaB; COG4572"
/db_xref="CDD:443629"
gene 1268298..1269014
/gene="chaC"
/locus_tag="SF1221"
/db_xref="GeneID:1024198"
CDS 1268298..1269014
/gene="chaC"
/locus_tag="SF1221"
/note="Code: P; COG: COG3703"
/codon_start=1
/transl_table=11
/product="cation transport regulator"
/protein_id="NP_707127.2"
/db_xref="GeneID:1024198"
/translation="MQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAAT
LACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRM
LALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVF
IMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLV
SVKKLLAENYPDGVLRPGFA"
misc_feature 1268412..1268975
/gene="chaC"
/locus_tag="SF1221"
/note="Gamma-glutamylcyclotransferase ChaC2 (glutathione
degradation) [Inorganic ion transport and metabolism];
Region: ChaC2; COG3703"
/db_xref="CDD:442917"
gene complement(1269058..1269411)
/gene="ychN"
/locus_tag="SF1222"
/db_xref="GeneID:1024181"
CDS complement(1269058..1269411)
/gene="ychN"
/locus_tag="SF1222"
/note="Code: P; COG: COG1553"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707128.1"
/db_xref="GeneID:1024181"
/translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
ELAQWTLSADKVLTF"
misc_feature complement(1269061..1269408)
/gene="ychN"
/locus_tag="SF1222"
/note="Sulfur relay (sulfurtransferase) complex TusBCD
TusD component, DsrE family [Inorganic ion transport and
metabolism]; Region: DsrE; COG1553"
/db_xref="CDD:441162"
gene 1269737..1270990
/gene="ychP"
/locus_tag="SF1223"
/db_xref="GeneID:1024169"
CDS 1269737..1270990
/gene="ychP"
/locus_tag="SF1223"
/codon_start=1
/transl_table=11
/product="invasin"
/protein_id="NP_707129.2"
/db_xref="GeneID:1024169"
/translation="MAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVR
DALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGL
TQQDNGLVSNVGVGQRWARGNWLVGYNTFYDNLQDENLQRAGFGAEAWGEYLRLSANF
YQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTG
YHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEV
AESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYG
IRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRV
SSNEITLTLVEPFDALSNDELRWEP"
misc_feature 1269737..1270987
/gene="ychP"
/locus_tag="SF1223"
/note="YchO/YchP family invasin; Region: PRK10177"
/db_xref="CDD:236661"
gene complement(1270991..1271641)
/gene="narL"
/locus_tag="SF1224"
/db_xref="GeneID:1024173"
CDS complement(1270991..1271641)
/gene="narL"
/locus_tag="SF1224"
/note="Code: TK; COG: COG2197"
/codon_start=1
/transl_table=11
/product="transcriptional regulator NarL"
/protein_id="NP_707130.2"
/db_xref="GeneID:1024173"
/translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE
RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
misc_feature complement(1270994..1271641)
/gene="narL"
/locus_tag="SF1224"
/note="transcriptional regulator NarL; Provisional;
Region: PRK10651"
/db_xref="CDD:182619"
gene complement(1271634..1273430)
/gene="narX"
/locus_tag="SF1225"
/db_xref="GeneID:1024167"
CDS complement(1271634..1273430)
/gene="narX"
/locus_tag="SF1225"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="nitrate/nitrite sensor protein NarX"
/protein_id="NP_707131.1"
/db_xref="GeneID:1024167"
/translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGL
QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
VFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT
TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
misc_feature complement(1271637..1273343)
/gene="narX"
/locus_tag="SF1225"
/note="nitrate/nitrite two-component system sensor
histidine kinase NarX; Region: PRK10600"
/db_xref="CDD:182581"
gene 1273769..1275160
/gene="narK"
/locus_tag="SF1226"
/db_xref="GeneID:1024179"
CDS 1273769..1275160
/gene="narK"
/locus_tag="SF1226"
/note="Code: P; COG: COG2223"
/codon_start=1
/transl_table=11
/product="nitrate transport protein NarK"
/protein_id="NP_707132.2"
/db_xref="GeneID:1024179"
/translation="MSHSSASERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
ERAMREAATGTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
VITWAVYGRHSKK"
misc_feature 1273778..1275157
/gene="narK"
/locus_tag="SF1226"
/note="Major Facilitator Superfamily; Region: MFS;
cl28910"
/db_xref="CDD:475125"
misc_feature order(1273910..1273915,1273922..1273927,1273934..1273936,
1274033..1274035,1274198..1274203,1274207..1274215,
1274222..1274224,1274279..1274281,1274288..1274293,
1274300..1274302,1274555..1274557,1274564..1274569,
1274576..1274584,1274591..1274593,1274669..1274671,
1274681..1274683,1274849..1274854,1274864..1274866,
1274876..1274878,1274987..1274989,1274996..1275001,
1275008..1275013,1275020..1275022)
/gene="narK"
/locus_tag="SF1226"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340899"
gene 1275553..1279296
/gene="narG"
/locus_tag="SF1227"
/db_xref="GeneID:1024170"
CDS 1275553..1279296
/gene="narG"
/locus_tag="SF1227"
/note="Code: C; COG: COG0243"
/codon_start=1
/transl_table=11
/product="nitrate reductase 1 subunit alpha"
/protein_id="NP_707133.1"
/db_xref="GeneID:1024170"
/translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR
SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
DWYCYLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGYLGKETDIVTLPIQHD
SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGG
KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNPEKALN
FLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALT
ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAH
LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK"
misc_feature 1275556..1279260
/gene="narG"
/locus_tag="SF1227"
/note="Nitrate reductase alpha subunit [Energy production
and conversion, Inorganic ion transport and metabolism];
Region: NarG; COG5013"
/db_xref="CDD:444037"
gene 1279293..1280831
/gene="narH"
/locus_tag="SF1228"
/db_xref="GeneID:1024183"
CDS 1279293..1280831
/gene="narH"
/locus_tag="SF1228"
/note="Code: P; COG: COG1140"
/codon_start=1
/transl_table=11
/product="nitrate reductase 1 subunit beta"
/protein_id="NP_707134.1"
/db_xref="GeneID:1024183"
/translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
ADAIERAASTENEKDLYQRQLDVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN
LLTAGDTKPILRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA
NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
EPHP"
misc_feature 1279293..1280747
/gene="narH"
/locus_tag="SF1228"
/note="Nitrate reductase beta subunit [Energy production
and conversion, Inorganic ion transport and metabolism];
Region: NarY; COG1140"
/db_xref="CDD:440755"
gene 1280828..1281538
/gene="narJ"
/locus_tag="SF1229"
/db_xref="GeneID:1024186"
CDS 1280828..1281538
/gene="narJ"
/locus_tag="SF1229"
/note="Code: C; COG: COG2180"
/codon_start=1
/transl_table=11
/product="nitrate reductase 1 subunit delta"
/protein_id="NP_707135.1"
/db_xref="GeneID:1024186"
/translation="MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLSKEDAHALG
IFLRDLTAMDPLDAQVQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
LQLNSRELPDHLPLYLEYLSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDL
LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
FAGAVAPQYLNITTGGQH"
misc_feature 1280828..1281529
/gene="narJ"
/locus_tag="SF1229"
/note="chaperone protein TorD; Validated; Region: torD;
cl00958"
/db_xref="CDD:470012"
gene 1281538..1282215
/gene="narI"
/locus_tag="SF1230"
/db_xref="GeneID:1024164"
CDS 1281538..1282215
/gene="narI"
/locus_tag="SF1230"
/note="Code: C; COG: COG2181"
/codon_start=1
/transl_table=11
/product="nitrate reductase 1 cytochrome b(NR) subunit
gamma"
/protein_id="NP_707136.1"
/db_xref="GeneID:1024164"
/translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
RKGMNLASNLFHIGILGIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
IGGVLLLKRRMFSPRVRATTTGADILILSLLVIQCTLGLLTIPFSAQHMDGSEMMKLV
GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
QLVRARH"
misc_feature 1281541..1282212
/gene="narI"
/locus_tag="SF1230"
/note="respiratory nitrate reductase, gamma subunit;
Region: narI; TIGR00351"
/db_xref="CDD:273030"
misc_feature complement(1282223..1282663)
/note="potential protein location (hypothetical protein
SF1231 [Shigella flexneri 2a str. 301]) that overlaps RNA
(tRNA-Y)"
gene complement(1282577..1282661)
/locus_tag="SF4466"
/db_xref="GeneID:3170937"
tRNA complement(1282577..1282661)
/locus_tag="SF4466"
/product="tRNA-Tyr"
/codon_recognized="UAC"
/db_xref="GeneID:3170937"
gene complement(1282821..1283663)
/gene="purU"
/locus_tag="SF1232"
/db_xref="GeneID:1024168"
CDS complement(1282821..1283663)
/gene="purU"
/locus_tag="SF1232"
/note="Code: F; COG: COG0788"
/codon_start=1
/transl_table=11
/product="formyltetrahydrofolate deformylase"
/protein_id="NP_707138.1"
/db_xref="GeneID:1024168"
/translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQ
PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
TIIL"
misc_feature complement(1282824..1283663)
/gene="purU"
/locus_tag="SF1232"
/note="formyltetrahydrofolate deformylase; Reviewed;
Region: purU; PRK06027"
/db_xref="CDD:235676"
gene complement(1283713..1284171)
/gene="ychJ"
/locus_tag="SF1233"
/db_xref="GeneID:1024163"
CDS complement(1283713..1284171)
/gene="ychJ"
/locus_tag="SF1233"
/note="Code: S; COG: COG3012"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707139.5"
/db_xref="GeneID:1024163"
/translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
DADYLIKTWHPSCGAAALRAELMTGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
misc_feature complement(1283716..1284171)
/gene="ychJ"
/locus_tag="SF1233"
/note="hypothetical protein; Provisional; Region:
PRK01617"
/db_xref="CDD:234966"
gene 1284284..1285189
/gene="ychK"
/locus_tag="SF1234"
/db_xref="GeneID:1026307"
CDS 1284284..1285189
/gene="ychK"
/locus_tag="SF1234"
/note="Code: R; COG: COG1752"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707140.2"
/db_xref="GeneID:1026307"
/translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEI
ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLG
SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
AAIAAGQLAVERKMDELLPLVRTNI"
misc_feature 1284284..1285183
/gene="ychK"
/locus_tag="SF1234"
/note="patatin-like phospholipase RssA; Region: PRK10279"
/db_xref="CDD:182352"
misc_feature order(1284320..1284325,1284329..1284331,1284404..1284406,
1284746..1284748)
/gene="ychK"
/locus_tag="SF1234"
/note="active site"
/db_xref="CDD:132866"
misc_feature 1284398..1284412
/gene="ychK"
/locus_tag="SF1234"
/note="nucleophile elbow; other site"
/db_xref="CDD:132866"
gene 1285281..1286294
/gene="hnr"
/locus_tag="SF1235"
/db_xref="GeneID:1024217"
CDS 1285281..1286294
/gene="hnr"
/locus_tag="SF1235"
/codon_start=1
/transl_table=11
/product="response regulator of RpoS"
/protein_id="NP_707141.1"
/db_xref="GeneID:1024217"
/translation="MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDAL
ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQEL
QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
SAE"
misc_feature 1285308..>1285457
/gene="hnr"
/locus_tag="SF1235"
/note="phosphoacceptor receiver (REC) domain of response
regulators (RRs) and pseudo response regulators (PRRs);
Region: REC; cl19078"
/db_xref="CDD:473134"
misc_feature 1285386..1286291
/gene="hnr"
/locus_tag="SF1235"
/note="two-component system response regulator RssB;
Region: PRK10693"
/db_xref="CDD:182652"
gene 1286496..1287404
/gene="galU"
/locus_tag="SF1236"
/db_xref="GeneID:1024213"
CDS 1286496..1287404
/gene="galU"
/locus_tag="SF1236"
/note="Code: M; COG: COG1210"
/codon_start=1
/transl_table=11
/product="UTP-glucose-1-phosphate uridylyltransferase"
/protein_id="NP_707142.1"
/db_xref="GeneID:1024213"
/translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
ETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
VEYGIRHNTLGTEFKAWLEEEMGIKK"
misc_feature 1286496..1287401
/gene="galU"
/locus_tag="SF1236"
/note="UTP--glucose-1-phosphate uridylyltransferase GalU;
Region: PRK13389"
/db_xref="CDD:184021"
misc_feature order(1286535..1286546,1286586..1286591,1286820..1286822,
1286829..1286840,1286898..1286900,1286904..1286909,
1287027..1287032,1287096..1287101,1287135..1287137,
1287219..1287221)
/gene="galU"
/locus_tag="SF1236"
/note="active site"
/db_xref="CDD:133021"
misc_feature order(1286547..1286549,1286556..1286570,1286574..1286582,
1286592..1286600,1286604..1286612,1286622..1286624,
1286694..1286696,1286700..1286708,1286712..1286714,
1286724..1286729,1286814..1286819,1286823..1286825,
1286829..1286831,1287024..1287026,1287207..1287209,
1287279..1287281,1287297..1287305,1287309..1287317,
1287321..1287329,1287336..1287341)
/gene="galU"
/locus_tag="SF1236"
/note="tetramer interface [active]"
/db_xref="CDD:133021"
gene complement(1287548..1287961)
/gene="hns"
/locus_tag="SF1237"
/db_xref="GeneID:1023363"
CDS complement(1287548..1287961)
/gene="hns"
/locus_tag="SF1237"
/note="Code: R; COG: COG2916"
/codon_start=1
/transl_table=11
/product="global DNA-binding transcriptional dual
regulator H-NS"
/protein_id="NP_707143.1"
/db_xref="GeneID:1023363"
/translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE
NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
misc_feature complement(1287557..1287961)
/gene="hns"
/locus_tag="SF1237"
/note="DNA-binding transcriptional regulator H-NS; Region:
PRK10947"
/db_xref="CDD:182858"
gene 1288566..1289183
/gene="tdk"
/locus_tag="SF1238"
/db_xref="GeneID:1024199"
CDS 1288566..1289183
/gene="tdk"
/locus_tag="SF1238"
/note="Code: F; COG: COG1435"
/codon_start=1
/transl_table=11
/product="thymidine kinase"
/protein_id="NP_707144.1"
/db_xref="GeneID:1024199"
/translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE
VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVGSLTAIQERHRHD"
misc_feature 1288566..1289135
/gene="tdk"
/locus_tag="SF1238"
/note="thymidine kinase; Provisional; Region: PRK04296"
/db_xref="CDD:235272"
mobile_element complement(1289455..1290882)
/mobile_element_type="insertion sequence:IS4"
gene complement(1289469..1290815)
/locus_tag="SF1239"
/db_xref="GeneID:1024206"
CDS complement(1289469..1290815)
/locus_tag="SF1239"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_707145.1"
/db_xref="GeneID:1024206"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRERAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature complement(1289727..1290725)
/locus_tag="SF1239"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene complement(1290923..1293598)
/gene="adhE"
/locus_tag="SF1240"
/db_xref="GeneID:1024221"
CDS complement(1290923..1293598)
/gene="adhE"
/locus_tag="SF1240"
/codon_start=1
/transl_table=11
/product="bifunctional acetaldehyde-CoA/alcohol
dehydrogenase"
/protein_id="NP_707146.1"
/db_xref="GeneID:1024221"
/translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAE
PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
ILLDTYYGRDYVEDETAAKKEAAPAKAEKKAKKSA"
misc_feature complement(1291013..1293598)
/gene="adhE"
/locus_tag="SF1240"
/note="bifunctional acetaldehyde-CoA/alcohol
dehydrogenase; Provisional; Region: PRK13805"
/db_xref="CDD:237515"
gene 1294075..1294722
/gene="ychE"
/locus_tag="SF1241"
/db_xref="GeneID:1024165"
CDS 1294075..1294722
/gene="ychE"
/locus_tag="SF1241"
/note="Code: S; COG: COG2095"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707147.2"
/db_xref="GeneID:1024165"
/translation="MIQTLFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
misc_feature 1294078..1294719
/gene="ychE"
/locus_tag="SF1241"
/note="YchE family NAAT transporter; Region: PRK11111"
/db_xref="CDD:236850"
mobile_element complement(1295074..1295841)
/mobile_element_type="insertion sequence:IS1"
gene complement(1295089..1295484)
/gene="insB"
/locus_tag="SF1242"
/db_xref="GeneID:1024176"
CDS complement(1295089..1295484)
/gene="insB"
/locus_tag="SF1242"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707148.1"
/db_xref="GeneID:1024176"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1295092..1295481)
/gene="insB"
/locus_tag="SF1242"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1295511..1295786)
/gene="insA"
/locus_tag="SF1243"
/db_xref="GeneID:1024210"
CDS complement(1295511..1295786)
/gene="insA"
/locus_tag="SF1243"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707149.1"
/db_xref="GeneID:1024210"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1295514..1295765)
/gene="insA"
/locus_tag="SF1243"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1296237..1297868
/gene="oppA"
/locus_tag="SF1244"
/db_xref="GeneID:1024192"
CDS 1296237..1297868
/gene="oppA"
/locus_tag="SF1244"
/note="Code: EP; COG: COG0747"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter substrate-binding
protein OppA"
/protein_id="NP_707150.2"
/db_xref="GeneID:1024192"
/translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL
RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL
GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
QGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLRYN
TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
misc_feature 1296237..1297865
/gene="oppA"
/locus_tag="SF1244"
/note="oligopeptide ABC transporter substrate-binding
protein OppA; Provisional; Region: PRK15104"
/db_xref="CDD:185059"
gene 1297954..1298874
/gene="oppB"
/locus_tag="SF1245"
/db_xref="GeneID:1024214"
CDS 1297954..1298874
/gene="oppB"
/locus_tag="SF1245"
/note="Code: EP; COG: COG0601"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter permease OppB"
/protein_id="NP_707151.1"
/db_xref="GeneID:1024214"
/translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW
LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
SLTILVGALTILFNAIVDVLYAVIDPKIRY"
misc_feature 1297954..1298871
/gene="oppB"
/locus_tag="SF1245"
/note="oligopeptide ABC transporter permease OppB; Region:
oppB; PRK09471"
/db_xref="CDD:181886"
gene 1298889..1299797
/gene="oppC"
/locus_tag="SF1246"
/db_xref="GeneID:1024204"
CDS 1298889..1299797
/gene="oppC"
/locus_tag="SF1246"
/note="Code: EP; COG: COG1173"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter permease OppC"
/protein_id="NP_707152.1"
/db_xref="GeneID:1024204"
/translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLI
VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR
ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTPGIVIRHIVPNV
LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
GFLVVTLFCFNFIGDGLRDALDPKDR"
misc_feature 1298889..1299794
/gene="oppC"
/locus_tag="SF1246"
/note="oligopeptide ABC transporter permease OppC;
Provisional; Region: PRK15406"
/db_xref="CDD:185304"
gene 1299809..1300822
/gene="oppD"
/locus_tag="SF1247"
/db_xref="GeneID:1024219"
CDS 1299809..1300822
/gene="oppD"
/locus_tag="SF1247"
/note="Code: EP; COG: COG0444"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter ATP-binding protein
OppD"
/protein_id="NP_707153.1"
/db_xref="GeneID:1024219"
/translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNF
SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPERELNKLR
AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVE
ELL"
misc_feature 1299830..1300816
/gene="oppD"
/locus_tag="SF1247"
/note="oligopeptide transporter ATP-binding component;
Provisional; Region: oppD; PRK09473"
/db_xref="CDD:181888"
gene 1300819..1301823
/gene="oppF"
/locus_tag="SF1248"
/db_xref="GeneID:1024196"
CDS 1300819..1301823
/gene="oppF"
/locus_tag="SF1248"
/note="Code: EP; COG: COG1124"
/codon_start=1
/transl_table=11
/product="oligopeptide ABC transporter ATP-binding protein
OppF"
/protein_id="NP_707154.1"
/db_xref="GeneID:1024196"
/translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT
LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSD
IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR
YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
"
misc_feature 1300828..1301820
/gene="oppF"
/locus_tag="SF1248"
/note="oligopeptide ABC transporter ATP-binding protein
OppF; Provisional; Region: PRK15079"
/db_xref="CDD:185037"
misc_feature 1300987..1301010
/gene="oppF"
/locus_tag="SF1248"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213224"
misc_feature order(1300996..1301001,1301005..1301013,1301140..1301142,
1301383..1301388,1301485..1301487)
/gene="oppF"
/locus_tag="SF1248"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213224"
misc_feature 1301131..1301142
/gene="oppF"
/locus_tag="SF1248"
/note="Q-loop/lid; other site"
/db_xref="CDD:213224"
misc_feature 1301311..1301340
/gene="oppF"
/locus_tag="SF1248"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213224"
misc_feature 1301371..1301388
/gene="oppF"
/locus_tag="SF1248"
/note="Walker B; other site"
/db_xref="CDD:213224"
misc_feature 1301395..1301406
/gene="oppF"
/locus_tag="SF1248"
/note="D-loop; other site"
/db_xref="CDD:213224"
misc_feature 1301473..1301493
/gene="oppF"
/locus_tag="SF1248"
/note="H-loop/switch region; other site"
/db_xref="CDD:213224"
gene complement(1301876..1302283)
/locus_tag="SF1249"
/db_xref="GeneID:1024245"
CDS complement(1301876..1302283)
/locus_tag="SF1249"
/note="Code: S; COG: COG3099"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707155.4"
/db_xref="GeneID:1024245"
/translation="MSPSDCFTSSARCCKTSPTEVKQVVTMDMDLNNRLTEDETLEQA
YDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIG
LTDSEDGEISDVFARILLCREKDHKLCHIIWRE"
misc_feature complement(1301879..1302199)
/locus_tag="SF1249"
/note="dsDNA-mimic protein; Reviewed; Region: PRK05094"
/db_xref="CDD:179934"
gene complement(1302240..1303700)
/gene="cls"
/locus_tag="SF1250"
/db_xref="GeneID:1024195"
CDS complement(1302240..1303700)
/gene="cls"
/locus_tag="SF1250"
/note="Code: I; COG: COG1502"
/codon_start=1
/transl_table=11
/product="cardiolipin synthetase"
/protein_id="NP_707156.1"
/db_xref="GeneID:1024195"
/translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQ
VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAH
EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL"
misc_feature complement(1302243..1303688)
/gene="cls"
/locus_tag="SF1250"
/note="cardiolipin synthetase; Reviewed; Region: cls;
PRK01642"
/db_xref="CDD:234967"
gene complement(1304071..1305324)
/gene="kch"
/locus_tag="SF1251"
/db_xref="GeneID:1024193"
CDS complement(1304071..1305324)
/gene="kch"
/locus_tag="SF1251"
/note="Code: P; COG: COG1226"
/codon_start=1
/transl_table=11
/product="voltage-gated potassium channel"
/protein_id="NP_707157.2"
/db_xref="GeneID:1024193"
/translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
SIFGPLIRGGFNKLLKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKD
MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
NSGHGIFSDNDEQETKADSKESAQK"
misc_feature complement(1304119..1305318)
/gene="kch"
/locus_tag="SF1251"
/note="voltage-gated potassium channel protein; Region:
PRK10537"
/db_xref="CDD:236711"
mobile_element 1305623..1306886
/mobile_element_type="insertion sequence:IS600"
gene 1305687..1305989
/locus_tag="SF1252"
/db_xref="GeneID:1026318"
CDS 1305687..1305989
/locus_tag="SF1252"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707158.1"
/db_xref="GeneID:1026318"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 1305687..1305959
/locus_tag="SF1252"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1306130..1306843
/locus_tag="SF1253"
/db_xref="GeneID:1027802"
CDS 1306130..1306843
/locus_tag="SF1253"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 integrase core
domain-containing protein"
/protein_id="NP_707159.1"
/db_xref="GeneID:1027802"
/translation="MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQ
KRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYT
CEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHS
RLGNISPATFREKYHQMAA"
misc_feature <1306130..1306816
/locus_tag="SF1253"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1306891..1307187)
/gene="yciI"
/locus_tag="SF1254"
/db_xref="GeneID:1024209"
CDS complement(1306891..1307187)
/gene="yciI"
/locus_tag="SF1254"
/note="Code: S; COG: COG2350"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707160.4"
/db_xref="GeneID:1024209"
/translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
misc_feature complement(1306894..1307187)
/gene="yciI"
/locus_tag="SF1254"
/note="YciI family protein; Region: PRK11370"
/db_xref="CDD:183103"
gene 1307402..1308130
/gene="tonB"
/locus_tag="SF1255"
/db_xref="GeneID:1024200"
CDS 1307402..1308130
/gene="tonB"
/locus_tag="SF1255"
/note="Code: M; COG: COG0810"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707161.2"
/db_xref="GeneID:1024200"
/translation="MTSITLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAP
AQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPK
PKPVKKVQEQPKRDVKPVESRPASPFENTAPARPTSSTATAATSKPVTSVASGPRALS
RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRY
EPGKPGSGIVVNILFKINGTTEIQ"
misc_feature 1307402..1308127
/gene="tonB"
/locus_tag="SF1255"
/note="transport protein TonB; Provisional; Region:
PRK10819"
/db_xref="CDD:236768"
gene complement(1308170..1308568)
/gene="yciA"
/locus_tag="SF1256"
/db_xref="GeneID:1024202"
CDS complement(1308170..1308568)
/gene="yciA"
/locus_tag="SF1256"
/note="Code: I; COG: COG1607"
/codon_start=1
/transl_table=11
/product="acyl-CoA thioesterase"
/protein_id="NP_707162.1"
/db_xref="GeneID:1024202"
/translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE
PIGQRYKATEALFKYVAVDPEGKPRALPVE"
misc_feature complement(1308173..1308568)
/gene="yciA"
/locus_tag="SF1256"
/note="acyl-CoA thioester hydrolase YciA; Region:
PRK10694"
/db_xref="CDD:236736"
gene complement(1308673..1309212)
/gene="yciB"
/locus_tag="SF1257"
/db_xref="GeneID:1024246"
CDS complement(1308673..1309212)
/gene="yciB"
/locus_tag="SF1257"
/note="Code: D; COG: COG2917"
/codon_start=1
/transl_table=11
/product="intracellular septation protein A"
/protein_id="NP_707163.1"
/db_xref="GeneID:1024246"
/translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
RMLSKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
FTLLSGIYIYRHMPQEDKS"
misc_feature complement(1308676..1309212)
/gene="yciB"
/locus_tag="SF1257"
/note="intracellular septation protein A; Reviewed;
Region: PRK00259"
/db_xref="CDD:234704"
gene complement(1309242..1309985)
/gene="yciC"
/locus_tag="SF1258"
/db_xref="GeneID:1024190"
CDS complement(1309242..1309985)
/gene="yciC"
/locus_tag="SF1258"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707164.2"
/db_xref="GeneID:1024190"
/translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSELIGNAILAGGVIL
IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
GAVLANTLSNLISAILLIYLFRLYMLIRQ"
misc_feature complement(1309245..1309976)
/gene="yciC"
/locus_tag="SF1258"
/note="hypothetical protein; Provisional; Region:
PRK02868"
/db_xref="CDD:235080"
gene 1310342..1310980
/gene="yciD"
/locus_tag="SF1259"
/db_xref="GeneID:1024208"
CDS 1310342..1310980
/gene="yciD"
/locus_tag="SF1259"
/note="Code: M; COG: COG3047"
/codon_start=1
/transl_table=11
/product="outer membrane protein W"
/protein_id="NP_707165.1"
/db_xref="GeneID:1024208"
/translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF"
misc_feature 1310342..1310977
/gene="yciD"
/locus_tag="SF1259"
/note="outer membrane protein W; Provisional; Region:
PRK10959"
/db_xref="CDD:182867"
gene complement(1311040..1311546)
/gene="yciE"
/locus_tag="SF1260"
/db_xref="GeneID:1024212"
CDS complement(1311040..1311546)
/gene="yciE"
/locus_tag="SF1260"
/note="Code: S; COG: COG3685"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707166.1"
/db_xref="GeneID:1024212"
/translation="MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQ
HLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSIGGYV
FEQFEITCYTSLLAAAKNAGDTVSIPIIEAILNEEKQMADWLIQHIPQTTEKFLIRSE
TDGVEAKK"
misc_feature complement(1311079..1311534)
/gene="yciE"
/locus_tag="SF1260"
/note="Domain of unknown function (DUF892); Region:
DUF892; pfam05974"
/db_xref="CDD:428701"
misc_feature complement(order(1311127..1311129,1311136..1311138,
1311235..1311237,1311391..1311393,1311400..1311402,
1311493..1311495))
/gene="yciE"
/locus_tag="SF1260"
/note="dinuclear metal binding motif [ion binding]; other
site"
/db_xref="CDD:153118"
gene complement(1311592..1312092)
/gene="yciF"
/locus_tag="SF1261"
/db_xref="GeneID:1024201"
CDS complement(1311592..1312092)
/gene="yciF"
/locus_tag="SF1261"
/note="Code: S; COG: COG3685"
/codon_start=1
/transl_table=11
/product="structural protein"
/protein_id="NP_707167.2"
/db_xref="GeneID:1024201"
/translation="MNMKTIEDVFIQLLSDTYSAEKQLTRALAKLARATSNEKLSQAF
HAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAAL
IAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNK
KAENKA"
misc_feature complement(1311595..1312092)
/gene="yciF"
/locus_tag="SF1261"
/note="Ferritin-like metal-binding protein YciE [Inorganic
ion transport and metabolism]; Region: YciE; COG3685"
/db_xref="CDD:442901"
gene complement(1312178..1312414)
/gene="yciG"
/locus_tag="SF1262"
/db_xref="GeneID:1023362"
CDS complement(1312178..1312414)
/gene="yciG"
/locus_tag="SF1262"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707168.1"
/db_xref="GeneID:1023362"
/translation="MSTHNTHINETMQRNGRNNMAEHRGSSGNFAEDREKASDAGRKG
GQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS"
misc_feature complement(<1312229..1312339)
/gene="yciG"
/locus_tag="SF1262"
/note="General stress protein YciG, contains tandem KGG
domains [General function prediction only]; Region: GsiB;
COG3729"
/db_xref="CDD:442943"
gene complement(1312737..1313543)
/gene="trpA"
/locus_tag="SF1263"
/db_xref="GeneID:1024231"
CDS complement(1312737..1313543)
/gene="trpA"
/locus_tag="SF1263"
/note="Code: E; COG: COG0159"
/codon_start=1
/transl_table=11
/product="tryptophan synthase subunit alpha"
/protein_id="NP_707169.1"
/db_xref="GeneID:1024231"
/translation="MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAG
ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD
DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS"
misc_feature complement(1312755..1313522)
/gene="trpA"
/locus_tag="SF1263"
/note="tryptophan synthase, alpha subunit; Region: trpA;
TIGR00262"
/db_xref="CDD:161792"
misc_feature complement(order(1312839..1312844,1312905..1312910,
1312992..1312997,1313019..1313021,1313352..1313354,
1313364..1313366,1313397..1313399))
/gene="trpA"
/locus_tag="SF1263"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:240075"
misc_feature complement(order(1312995..1312997,1313238..1313240,
1313364..1313366,1313397..1313399))
/gene="trpA"
/locus_tag="SF1263"
/note="active site"
/db_xref="CDD:240075"
misc_feature complement(order(1313238..1313240,1313364..1313366,
1313397..1313399))
/gene="trpA"
/locus_tag="SF1263"
/note="catalytic residues [active]"
/db_xref="CDD:240075"
misc_feature complement(order(1313058..1313060,1313067..1313075,
1313079..1313081,1313139..1313141,1313148..1313150,
1313154..1313159,1313223..1313225,1313232..1313234,
1313346..1313351,1313358..1313360,1313367..1313369,
1313373..1313384))
/gene="trpA"
/locus_tag="SF1263"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:240075"
gene complement(1313543..1314736)
/gene="trpB"
/locus_tag="SF1264"
/db_xref="GeneID:1024191"
CDS complement(1313543..1314736)
/gene="trpB"
/locus_tag="SF1264"
/note="Code: E; COG: COG0133"
/codon_start=1
/transl_table=11
/product="tryptophan synthase subunit beta"
/protein_id="NP_707170.1"
/db_xref="GeneID:1024191"
/translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILE
REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
AFKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILK
ARGEI"
misc_feature complement(1313564..1314724)
/gene="trpB"
/locus_tag="SF1264"
/note="tryptophan synthase subunit beta; Validated;
Region: PRK04346"
/db_xref="CDD:235288"
misc_feature complement(order(1313606..1313608,1313687..1313689,
1314029..1314043,1314167..1314169,1314395..1314397,
1314476..1314481))
/gene="trpB"
/locus_tag="SF1264"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:107207"
misc_feature complement(1314476..1314478)
/gene="trpB"
/locus_tag="SF1264"
/note="catalytic residue [active]"
/db_xref="CDD:107207"
gene complement(1314748..1316109)
/gene="trpC"
/locus_tag="SF1265"
/db_xref="GeneID:1024227"
CDS complement(1314748..1316109)
/gene="trpC"
/locus_tag="SF1265"
/codon_start=1
/transl_table=11
/product="bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase"
/protein_id="NP_707171.1"
/db_xref="GeneID:1024227"
/translation="MMQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDAL
QGARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLL
IVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMG
VLTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGI
NTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAG
AIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQL
HGNEDQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDW
SLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTL
RAY"
misc_feature complement(1314751..1316109)
/gene="trpC"
/locus_tag="SF1265"
/note="bifunctional indole-3-glycerol-phosphate synthase
TrpC/phosphoribosylanthranilate isomerase TrpF; Region:
PRK09427"
/db_xref="CDD:236509"
gene complement(1316110..1317705)
/gene="trpD"
/locus_tag="SF1266"
/db_xref="GeneID:1024238"
CDS complement(1316110..1317705)
/gene="trpD"
/locus_tag="SF1266"
/note="Code: E; COG: COG0547"
/codon_start=1
/transl_table=11
/product="bifunctional glutamine
amidotransferase/anthranilate phosphoribosyltransferase"
/protein_id="NP_707172.1"
/db_xref="GeneID:1024238"
/translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPANTLQPILEKLYQAQTLSQQES
HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAN
KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGKIKSYQLTAEDF
GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
QTVLEVLRSGSAYDRVTALAARG"
misc_feature complement(1316113..1317705)
/gene="trpD"
/locus_tag="SF1266"
/note="bifunctional anthranilate synthase glutamate
amidotransferase component TrpG/anthranilate
phosphoribosyltransferase TrpD; Region: PRK09522"
/db_xref="CDD:181927"
gene complement(1317705..1319267)
/gene="trpE"
/locus_tag="SF1267"
/db_xref="GeneID:1024203"
CDS complement(1317705..1319267)
/gene="trpE"
/locus_tag="SF1267"
/note="Code: EH; COG: COG0147"
/codon_start=1
/transl_table=11
/product="anthranilate synthase component I"
/protein_id="NP_707173.1"
/db_xref="GeneID:1024203"
/translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGNRPATLLLESADID
SKDDLKSLLLIDSALRITALGDTVTIQALSGNGEALLALLDNALPAGVESEQSPNCRV
LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED
LPQLSAENNCPDFCFYLAETLMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNELRQQ
LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPS
PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYIADLTKVDR
YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGVVLDSVPQSEADETRNKARAVLR
AIATAHHAQETF"
misc_feature complement(1317708..1319267)
/gene="trpE"
/locus_tag="SF1267"
/note="anthranilate synthase component 1; Region:
PRK13564"
/db_xref="CDD:237428"
gene 1319650..1320450
/gene="yciV"
/locus_tag="SF1269"
/db_xref="GeneID:1024234"
CDS 1319650..1320450
/gene="yciV"
/locus_tag="SF1269"
/note="Code: R; COG: COG0613"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707175.1"
/db_xref="GeneID:1024234"
/translation="MVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGV
EISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQQIAERLEKAQIPGALEG
AQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTIEQAIDVI
HHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLATLARQ
HHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL"
misc_feature 1319650..1320357
/gene="yciV"
/locus_tag="SF1269"
/note="5'-3' exoribonuclease TrpH/YciV (RNase AM),
contains PHP domain [Nucleotide transport and metabolism];
Region: YciV; COG0613"
/db_xref="CDD:440378"
gene 1320411..1321067
/gene="yciO"
/locus_tag="SF1270"
/db_xref="GeneID:1024232"
CDS 1320411..1321067
/gene="yciO"
/locus_tag="SF1270"
/note="Code: J; COG: COG0009"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707176.1"
/db_xref="GeneID:1024232"
/translation="MGTAAEHHREGIMSQFFYIHPDNPQQRLINQAVEIVRKGGVIVY
PTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMK
NNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLP
GSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
"
misc_feature 1320447..1321064
/gene="yciO"
/locus_tag="SF1270"
/note="threonylcarbamoyl-AMP synthase; Region: PRK11630"
/db_xref="CDD:183245"
gene 1321168..1322004
/gene="yciL"
/locus_tag="SF1271"
/pseudo
/db_xref="GeneID:1024244"
misc_feature 1321168..1322004
/gene="yciL"
/locus_tag="SF1271"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787524 (292 aa). BLAST with
identity of 98% in 279 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(1322051..1322641)
/gene="btuR"
/locus_tag="SF1272"
/db_xref="GeneID:1024239"
CDS complement(1322051..1322641)
/gene="btuR"
/locus_tag="SF1272"
/note="Code: H; COG: COG2109"
/codon_start=1
/transl_table=11
/product="cob(I)alamin adenolsyltransferase/cobinamide
ATP-dependent adenolsyltransferase"
/protein_id="NP_707177.1"
/db_xref="GeneID:1024239"
/translation="MSDERYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTA
AFGTATRAVGHGKKVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDT
AACREVWQHAKRMLADSSLDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITG
RGCHRDILELADTVSELRPIRHAFDAGVKAQIGIDY"
misc_feature complement(1322054..1322623)
/gene="btuR"
/locus_tag="SF1272"
/note="cob(I)yrinic acid a,c-diamide adenosyltransferase;
Region: PRK05986"
/db_xref="CDD:235662"
misc_feature complement(order(1322054..1322062,1322066..1322071,
1322075..1322083,1322090..1322095,1322099..1322101,
1322108..1322131,1322135..1322140,1322177..1322179,
1322414..1322419,1322423..1322428,1322432..1322434,
1322477..1322494,1322498..1322503,1322513..1322515,
1322525..1322527,1322558..1322560))
/gene="btuR"
/locus_tag="SF1272"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:410862"
misc_feature complement(order(1322057..1322059,1322096..1322098,
1322159..1322161,1322258..1322260,1322489..1322491,
1322513..1322533))
/gene="btuR"
/locus_tag="SF1272"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:410862"
misc_feature complement(order(1322090..1322092,1322159..1322161,
1322237..1322239,1322249..1322251,1322363..1322365,
1322435..1322437,1322444..1322446))
/gene="btuR"
/locus_tag="SF1272"
/note="hydroxycobalamin binding site [chemical binding];
other site"
/db_xref="CDD:410862"
gene complement(1322638..1323396)
/gene="yciK"
/locus_tag="SF1273"
/db_xref="GeneID:1024233"
CDS complement(1322638..1323396)
/gene="yciK"
/locus_tag="SF1273"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="oxoacyl-(acyl carrier protein) reductase"
/protein_id="NP_707178.1"
/db_xref="GeneID:1024233"
/translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGL
LGDVCPMSEQNPQVWQDVMQINVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
misc_feature complement(1322659..1323396)
/gene="yciK"
/locus_tag="SF1273"
/note="putative oxoacyl-(acyl carrier protein) reductase;
Provisional; Region: PRK08945"
/db_xref="CDD:236357"
misc_feature complement(order(1322791..1322796,1322800..1322802,
1322806..1322817,1322890..1322892,1322902..1322904,
1322941..1322949,1323028..1323030,1323094..1323102,
1323181..1323192,1323265..1323267,1323325..1323336,
1323340..1323342))
/gene="yciK"
/locus_tag="SF1273"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187599"
misc_feature complement(order(1322848..1322856,1322860..1322868,
1322872..1322880,1322884..1322889,1322896..1322901,
1322908..1322910,1322914..1322928,1322989..1322991,
1322998..1323000,1323007..1323012,1323019..1323024,
1323031..1323036,1323043..1323048,1323055..1323057,
1323061..1323075))
/gene="yciK"
/locus_tag="SF1273"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187599"
misc_feature complement(order(1322890..1322892,1322902..1322904,
1322941..1322943,1323025..1323027))
/gene="yciK"
/locus_tag="SF1273"
/note="active site"
/db_xref="CDD:187599"
gene 1323616..1324665
/gene="sohB"
/locus_tag="SF1274"
/db_xref="GeneID:1024236"
CDS 1323616..1324665
/gene="sohB"
/locus_tag="SF1274"
/note="Code: NO; COG: COG0616"
/codon_start=1
/transl_table=11
/product="inner membrane peptidase"
/protein_id="NP_707179.1"
/db_xref="GeneID:1024236"
/translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
NNLSEQYKEMKEELAAALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKD
IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
RLLLRWWQRGQKPLM"
misc_feature 1323622..1324638
/gene="sohB"
/locus_tag="SF1274"
/note="putative inner membrane peptidase; Provisional;
Region: PRK11778"
/db_xref="CDD:236978"
gene complement(1324701..1324952)
/gene="yciN"
/locus_tag="SF1275"
/db_xref="GeneID:1024241"
CDS complement(1324701..1324952)
/gene="yciN"
/locus_tag="SF1275"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707180.1"
/db_xref="GeneID:1024241"
/translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
misc_feature complement(1324704..1324952)
/gene="yciN"
/locus_tag="SF1275"
/note="hypothetical protein; Provisional; Region:
PRK11037"
/db_xref="CDD:182919"
gene 1325332..1327929
/gene="topA"
/locus_tag="SF1276"
/db_xref="GeneID:1024248"
CDS 1325332..1327929
/gene="topA"
/locus_tag="SF1276"
/note="Code: L; COG: COG0550"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase I subunit omega"
/protein_id="NP_707181.2"
/db_xref="GeneID:1024248"
/translation="MGKALVIVESPAKAKTINKYLGCDYVVKSSVGHIRDLPTSGSAA
KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
PAVHKDHALTLVELTPVHHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGRATGWSAFYV
DGKWVEGKK"
misc_feature 1325335..1327878
/gene="topA"
/locus_tag="SF1276"
/note="DNA topoisomerase I subunit omega; Validated;
Region: PRK07561"
/db_xref="CDD:236048"
gene 1328139..1329113
/gene="cysB"
/locus_tag="SF1277"
/db_xref="GeneID:1024223"
CDS 1328139..1329113
/gene="cysB"
/locus_tag="SF1277"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="transcriptional regulator CysB"
/protein_id="NP_707182.1"
/db_xref="GeneID:1024223"
/translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
QARYALPNVIKGFIERYPRVSLHMHQGPPTQIADAVSKGNADFAIATEALHLYEDLVM
LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
misc_feature 1328139..1329110
/gene="cysB"
/locus_tag="SF1277"
/note="HTH-type transcriptional regulator CysB; Region:
cysB; PRK12681"
/db_xref="CDD:183678"
gene 1329408..1329572
/locus_tag="SF1278"
/db_xref="GeneID:1024242"
CDS 1329408..1329572
/locus_tag="SF1278"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707183.1"
/db_xref="GeneID:1024242"
/translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV
VALLIWKVWG"
misc_feature 1329444..1329569
/locus_tag="SF1278"
/note="YmiA family putative membrane protein; Region:
YmiA; NF000536"
/db_xref="CDD:333720"
gene 1329554..1329742
/gene="yciX"
/locus_tag="SF1279"
/db_xref="GeneID:1027803"
CDS 1329554..1329742
/gene="yciX"
/locus_tag="SF1279"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707184.1"
/db_xref="GeneID:1027803"
/translation="MESVGITMVGQEQLESSPLCQHSDNEPETKRECSVVIPDDWQLT
SQQQAFIELFAEDDQPKQ"
gene 1330115..1332790
/gene="acnA"
/locus_tag="SF1280"
/db_xref="GeneID:1024229"
CDS 1330115..1332790
/gene="acnA"
/locus_tag="SF1280"
/note="Code: C; COG: COG1048"
/codon_start=1
/transl_table=11
/product="aconitate hydratase 1"
/protein_id="NP_707185.1"
/db_xref="GeneID:1024229"
/translation="MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKV
LLENLLRWQDGNSVTEEDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAA
MREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFL
KWGKQAFSRFSVVPPGTGICHQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMI
NGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLR
KHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSE
DQVELVEKYAKAQGMWRNPGDEPIFTSMLELDMNDVEASLAGPKRPQDRVALPDVPKA
FAASNELKVNATHKDRLPVDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLL
AKKAVTLGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNS
GPLPDPIETAIKKGDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNI
NLASEPIGHDRKGEPVYLKDIWPSAQEIARAVEQVSTEMFRKEYAEVFEGTAEWKEIN
VTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIHGARILAMLGDSVTTDHISPAGS
IKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTR
HLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESF
ERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDIGDLQNLQPGATVPVTLTRADG
SQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK"
misc_feature 1330115..1332787
/gene="acnA"
/locus_tag="SF1280"
/note="aconitate hydratase AcnA; Region: PRK09277"
/db_xref="CDD:236445"
gene complement(1332854..1333444)
/gene="ribA"
/locus_tag="SF1281"
/db_xref="GeneID:1024226"
CDS complement(1332854..1333444)
/gene="ribA"
/locus_tag="SF1281"
/note="Code: H; COG: COG0807"
/codon_start=1
/transl_table=11
/product="GTP cyclohydrolase II"
/protein_id="NP_707186.2"
/db_xref="GeneID:1024226"
/translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
misc_feature complement(1332857..1333444)
/gene="ribA"
/locus_tag="SF1281"
/note="GTP cyclohydrolase II RibA; Region: ribA; PRK00393"
/db_xref="CDD:234745"
misc_feature complement(order(1333118..1333120,1333127..1333132,
1333136..1333141,1333148..1333153,1333175..1333177,
1333181..1333183,1333220..1333222,1333229..1333234,
1333253..1333255,1333259..1333273,1333277..1333282,
1333286..1333288,1333340..1333342,1333346..1333348,
1333352..1333354,1333373..1333381,1333385..1333387,
1333409..1333429))
/gene="ribA"
/locus_tag="SF1281"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238348"
misc_feature complement(order(1332983..1332985,1332992..1333000,
1333061..1333063,1333067..1333069,1333103..1333105,
1333121..1333123,1333130..1333132,1333142..1333144,
1333163..1333174,1333235..1333237,1333244..1333246,
1333250..1333252,1333277..1333279,1333283..1333300))
/gene="ribA"
/locus_tag="SF1281"
/note="active site"
/db_xref="CDD:238348"
gene 1333614..1334378
/gene="pgpB"
/locus_tag="SF1282"
/db_xref="GeneID:1024235"
CDS 1333614..1334378
/gene="pgpB"
/locus_tag="SF1282"
/note="Code: I; COG: COG0671"
/codon_start=1
/transl_table=11
/product="phosphatidylglycerophosphatase B"
/protein_id="NP_707187.1"
/db_xref="GeneID:1024235"
/translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
SGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLI
SWALVAVATWLAQRICGPLTPPAEENREIAQREQES"
misc_feature 1333614..1334345
/gene="pgpB"
/locus_tag="SF1282"
/note="phosphatidylglycerophosphatase B; Provisional;
Region: PRK10699"
/db_xref="CDD:182658"
misc_feature order(1333902..1333904,1333923..1333925,1334094..1334102,
1334214..1334216,1334232..1334234,1334244..1334246)
/gene="pgpB"
/locus_tag="SF1282"
/note="active site"
/db_xref="CDD:238813"
gene 1334527..1334835
/gene="yciS"
/locus_tag="SF1283"
/db_xref="GeneID:1026325"
CDS 1334527..1334835
/gene="yciS"
/locus_tag="SF1283"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707188.1"
/db_xref="GeneID:1026325"
/translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
"
misc_feature 1334527..1334811
/gene="yciS"
/locus_tag="SF1283"
/note="Lipopolysaccharide assembly protein YciS/LapA,
DUF1049 family [Function unknown]; Region: YciS; COG3771"
/db_xref="CDD:442985"
gene 1334842..1336011
/gene="yciM"
/locus_tag="SF1284"
/db_xref="GeneID:1024224"
CDS 1334842..1336011
/gene="yciM"
/locus_tag="SF1284"
/note="Code: G; COG: COG2956"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707189.1"
/db_xref="GeneID:1024224"
/translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSI
MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
KESLMVLRDMVGEKVRSKPRYSCHKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
misc_feature 1334869..1336008
/gene="yciM"
/locus_tag="SF1284"
/note="tetratricopeptide repeat protein; Provisional;
Region: PRK11788"
/db_xref="CDD:236983"
misc_feature order(1334968..1334973,1334977..1334979,1335049..1335051,
1335058..1335063,1335070..1335075,1335079..1335084,
1335151..1335153,1335172..1335177,1335184..1335189,
1335196..1335198)
/gene="yciM"
/locus_tag="SF1284"
/note="putative protein binding surface [polypeptide
binding]; other site"
/db_xref="CDD:276809"
misc_feature 1335043..1335135
/gene="yciM"
/locus_tag="SF1284"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature 1335148..1335237
/gene="yciM"
/locus_tag="SF1284"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature 1335262..1335348
/gene="yciM"
/locus_tag="SF1284"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature 1335379..1335465
/gene="yciM"
/locus_tag="SF1284"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature order(1335382..1335384,1335391..1335396,1335403..1335408,
1335412..1335414,1335484..1335486,1335493..1335498,
1335505..1335510,1335514..1335519,1335589..1335591,
1335598..1335603,1335610..1335615,1335622..1335624)
/gene="yciM"
/locus_tag="SF1284"
/note="putative protein binding surface [polypeptide
binding]; other site"
/db_xref="CDD:276809"
misc_feature 1335478..1335570
/gene="yciM"
/locus_tag="SF1284"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature 1335583..1335672
/gene="yciM"
/locus_tag="SF1284"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
gene 1336204..1336941
/gene="pyrF"
/locus_tag="SF1285"
/db_xref="GeneID:1024264"
CDS 1336204..1336941
/gene="pyrF"
/locus_tag="SF1285"
/note="Code: F; COG: COG0284"
/codon_start=1
/transl_table=11
/product="orotidine 5'-phosphate decarboxylase"
/protein_id="NP_707190.1"
/db_xref="GeneID:1024264"
/translation="MTLTASSSSRAVTNSPVVVALDYHNCDDALSFVDKIDPRDCRLK
VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG
GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQK
CDLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALAAGVDYM
VIGRPVTQSVDPAQTLKAINASLQRSA"
misc_feature 1336240..1336932
/gene="pyrF"
/locus_tag="SF1285"
/note="orotidine-5'-phosphate decarboxylase; Region:
PRK00230"
/db_xref="CDD:234695"
misc_feature order(1336261..1336263,1336267..1336269,1336333..1336335,
1336339..1336341,1336414..1336416,1336420..1336422,
1336591..1336596,1336768..1336770,1336864..1336869)
/gene="pyrF"
/locus_tag="SF1285"
/note="active site"
/db_xref="CDD:240076"
misc_feature order(1336339..1336341,1336345..1336350,1336417..1336422,
1336426..1336431,1336438..1336443,1336450..1336455,
1336498..1336506,1336537..1336539,1336591..1336593,
1336651..1336653,1336867..1336869)
/gene="pyrF"
/locus_tag="SF1285"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:240076"
gene 1336938..1337267
/gene="yciH"
/locus_tag="SF1286"
/db_xref="GeneID:1024225"
CDS 1336938..1337267
/gene="yciH"
/locus_tag="SF1286"
/note="Code: J; COG: COG0023"
/codon_start=1
/transl_table=11
/product="translation initiation factor Sui1"
/protein_id="NP_707191.1"
/db_xref="GeneID:1024225"
/translation="MMSDSNSRLVYSTETGRIDEPKAAPVRPKGDGAVRIQRQTSGRK
GKGVCLITGIDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGM
KVTLAGG"
misc_feature 1336941..1337264
/gene="yciH"
/locus_tag="SF1286"
/note="stress response translation initiation inhibitor
YciH; Region: PRK09019"
/db_xref="CDD:181613"
misc_feature order(1337058..1337060,1337070..1337075,1337079..1337081,
1337133..1337135,1337142..1337150,1337154..1337162,
1337166..1337168,1337193..1337195,1337202..1337204)
/gene="yciH"
/locus_tag="SF1286"
/note="putative rRNA binding site [nucleotide binding];
other site"
/db_xref="CDD:211319"
gene complement(1337394..1337612)
/gene="osmB"
/locus_tag="SF1287"
/db_xref="GeneID:1024276"
CDS complement(1337394..1337612)
/gene="osmB"
/locus_tag="SF1287"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_707192.1"
/db_xref="GeneID:1024276"
/translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
misc_feature complement(1337397..1337612)
/gene="osmB"
/locus_tag="SF1287"
/note="osmotically-inducible lipoprotein OsmB; Region:
PRK10540"
/db_xref="CDD:182532"
gene complement(1337881..1338630)
/locus_tag="SF1288"
/db_xref="GeneID:1024263"
CDS complement(1337881..1338630)
/locus_tag="SF1288"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DeoR family transcriptional regulator"
/protein_id="NP_707193.1"
/db_xref="GeneID:1024263"
/translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA
RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKESPAIVLTDSSKFGAVHSYSIGPVE
RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
misc_feature complement(1337890..1338630)
/locus_tag="SF1288"
/note="DNA-binding transcriptional regulator YciT; Region:
trans_reg_YciT; NF040887"
/db_xref="CDD:468823"
gene complement(1338720..1338902)
/locus_tag="SF1289"
/db_xref="GeneID:1024207"
CDS complement(1338720..1338902)
/locus_tag="SF1289"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707194.1"
/db_xref="GeneID:1024207"
/translation="MSLMSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLR
QVAESTPDIPKTPWEI"
misc_feature complement(1338723..1338893)
/locus_tag="SF1289"
/note="hypothetical protein; Provisional; Region:
PRK13658"
/db_xref="CDD:184215"
gene complement(1339041..1341015)
/gene="yciR"
/locus_tag="SF1290"
/pseudo
/db_xref="GeneID:1024237"
misc_feature complement(1339041..1341015)
/gene="yciR"
/locus_tag="SF1290"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787541 (662 aa). BLAST with
identity of 98% in 658 aa. This CDS contains deletion. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(1341250..1343184)
/gene="rnb"
/locus_tag="SF1291"
/db_xref="GeneID:1024215"
CDS complement(1341250..1343184)
/gene="rnb"
/locus_tag="SF1291"
/note="Code: K; COG: COG0557"
/codon_start=1
/transl_table=11
/product="exoribonuclease II"
/protein_id="NP_707195.1"
/db_xref="GeneID:1024215"
/translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLTIVPD
HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTSLDFVTIDSASTEDMDDALFAKALP
DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
EVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWKPESEAIA
EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
KLRRELDAQPTGFLDSRIRRFQSFAEISSEPGPHFGLGLEAYATWTSPIRKYGDMINH
RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTGTRFAA
EIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVI
DVTIAEVRMETRSIIARPVA"
misc_feature complement(1341256..1343184)
/gene="rnb"
/locus_tag="SF1291"
/note="exoribonuclease II; Provisional; Region: PRK05054"
/db_xref="CDD:179920"
gene complement(1343252..1344379)
/gene="yciW"
/locus_tag="SF1292"
/db_xref="GeneID:1024260"
CDS complement(1343252..1344379)
/gene="yciW"
/locus_tag="SF1292"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707196.2"
/db_xref="GeneID:1024260"
/translation="MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVI
LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
NYYSARLTPLPGPDSSRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTVWDC
VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLAIQNYADASLFADESIRWRSSYEV
EKLPEEHTKSSTAELCQLAETLSLHPISLSLLEKLLNSTRVNAQPDNQLAALLCARIN
GSPACFSTCMDSSNEYKKISTLLRKGENEINRWADRHSVERATVQAIQWLTRAPDRFS
AAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY"
misc_feature complement(1343804..>1344181)
/gene="yciW"
/locus_tag="SF1292"
/note="N-terminal domain of uncharacterized protein YciW
(function unknown) [Function unknown]; Region: YciW1;
COG4950"
/db_xref="CDD:443977"
misc_feature complement(1343264..1343584)
/gene="yciW"
/locus_tag="SF1292"
/note="Alkylhydroperoxidase family enzyme, contains CxxC
motif [Inorganic ion transport and metabolism]; Region:
YciW; COG2128"
/db_xref="CDD:441731"
gene complement(1344523..1345311)
/gene="fabI"
/locus_tag="SF1293"
/db_xref="GeneID:1024254"
CDS complement(1344523..1345311)
/gene="fabI"
/locus_tag="SF1293"
/note="Code: I; COG: COG0623"
/codon_start=1
/transl_table=11
/product="enoyl-ACP reductase"
/protein_id="NP_707197.1"
/db_xref="GeneID:1024254"
/translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
misc_feature complement(1344526..1345311)
/gene="fabI"
/locus_tag="SF1293"
/note="enoyl-ACP reductase FabI; Region: PRK07984"
/db_xref="CDD:181187"
misc_feature complement(order(1344721..1344732,1344736..1344747,
1344823..1344825,1344844..1344846,1344874..1344882,
1344955..1344957,1345030..1345041,1345117..1345125,
1345192..1345194,1345252..1345257,1345267..1345275))
/gene="fabI"
/locus_tag="SF1293"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187630"
misc_feature complement(order(1344553..1344558,1344562..1344600,
1344604..1344606,1344619..1344621,1344628..1344633,
1344640..1344642,1344658..1344669,1344685..1344687,
1344694..1344696,1344775..1344780,1344784..1344801,
1344805..1344810,1344817..1344822,1344829..1344834,
1344841..1344846,1344850..1344861,1344865..1344870,
1344916..1344918,1344925..1344927,1344937..1344939,
1344946..1344951,1344958..1344963,1344970..1344975,
1344982..1344990,1344994..1345005,1345099..1345101,
1345108..1345119,1345222..1345224))
/gene="fabI"
/locus_tag="SF1293"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:187630"
misc_feature complement(order(1344781..1344789,1344793..1344801,
1344805..1344810,1344817..1344822,1344829..1344834,
1344841..1344846,1344853..1344861,1344865..1344870,
1344916..1344918,1344925..1344930,1344937..1344939,
1344946..1344951,1344958..1344963,1344970..1344975,
1344982..1344990,1344994..1345005,1345108..1345119))
/gene="fabI"
/locus_tag="SF1293"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187630"
misc_feature complement(order(1344703..1344705,1344712..1344714,
1344721..1344726,1344823..1344825,1344835..1344837,
1344844..1344846,1344874..1344876,1345027..1345029,
1345033..1345035))
/gene="fabI"
/locus_tag="SF1293"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187630"
misc_feature complement(order(1344823..1344825,1344835..1344837,
1344874..1344876,1344952..1344954))
/gene="fabI"
/locus_tag="SF1293"
/note="active site"
/db_xref="CDD:187630"
gene complement(1345679..1346032)
/gene="ycjD"
/locus_tag="SF1294"
/db_xref="GeneID:1024265"
CDS complement(1345679..1346032)
/gene="ycjD"
/locus_tag="SF1294"
/note="Code: S; COG: COG2852"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707198.1"
/db_xref="GeneID:1024265"
/translation="MMDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVG
SYILDFACCSARVVVELDGGQHDLAVAYDTRRTSWLESQGWTVLRFWNNEIDCNEEAV
LEIILQELNRRSPSP"
misc_feature complement(1345682..1346032)
/gene="ycjD"
/locus_tag="SF1294"
/note="DUF559 domain-containing protein; Region: PRK09767"
/db_xref="CDD:182067"
misc_feature complement(order(1345814..1345816,1345835..1345837,
1345886..1345888,1345973..1345975))
/gene="ycjD"
/locus_tag="SF1294"
/note="putative active site [active]"
/db_xref="CDD:411708"
gene complement(1346100..1346906)
/gene="sapF"
/locus_tag="SF1295"
/db_xref="GeneID:1024268"
CDS complement(1346100..1346906)
/gene="sapF"
/locus_tag="SF1295"
/note="Code: EP; COG: COG1124"
/codon_start=1
/transl_table=11
/product="antimicrobial peptide ABC transporter
ATP-binding protein SapF"
/protein_id="NP_707199.1"
/db_xref="GeneID:1024268"
/translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
misc_feature complement(1346103..1346903)
/gene="sapF"
/locus_tag="SF1295"
/note="peptide ABC transporter ATP-binding protein SapF;
Region: PRK15112"
/db_xref="CDD:185067"
gene complement(1346908..1347900)
/gene="sapD"
/locus_tag="SF1296"
/db_xref="GeneID:1024262"
CDS complement(1346908..1347900)
/gene="sapD"
/locus_tag="SF1296"
/note="Code: EP; COG: COG0444"
/codon_start=1
/transl_table=11
/product="antimicrobial peptide ABC transporter
ATP-binding protein"
/protein_id="NP_707200.1"
/db_xref="GeneID:1024262"
/translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
GKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
misc_feature complement(1346911..1347900)
/gene="sapD"
/locus_tag="SF1296"
/note="peptide ABC transporter ATP-binding protein SapD;
Region: PRK15093"
/db_xref="CDD:185049"
gene complement(1347900..1348790)
/gene="sapC"
/locus_tag="SF1297"
/db_xref="GeneID:1024270"
CDS complement(1347900..1348790)
/gene="sapC"
/locus_tag="SF1297"
/note="Code: EP; COG: COG1173"
/codon_start=1
/transl_table=11
/product="antimicrobial peptide ABC transporter permease
SapC"
/protein_id="NP_707201.1"
/db_xref="GeneID:1024270"
/translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
AMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
VLLVNLLGDGVRRAIIAGVE"
misc_feature complement(1347903..1348790)
/gene="sapC"
/locus_tag="SF1297"
/note="peptide ABC transporter permease SapC; Region:
PRK15111"
/db_xref="CDD:185066"
gene complement(1348777..1349742)
/gene="sapB"
/locus_tag="SF1298"
/db_xref="GeneID:1024258"
CDS complement(1348777..1349742)
/gene="sapB"
/locus_tag="SF1298"
/note="Code: EP; COG: COG0601"
/codon_start=1
/transl_table=11
/product="antimicrobial peptide ABC transporter permease
SapB"
/protein_id="NP_707202.1"
/db_xref="GeneID:1024258"
/translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
VFWFNGLIHWDFGVSSINGQPIAEQLKELFPATIELCILAFGFALIVGIPVGMIAGIT
RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA
LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
misc_feature complement(1348780..1349742)
/gene="sapB"
/locus_tag="SF1298"
/note="peptide ABC transporter permease SapB; Region:
PRK15110"
/db_xref="CDD:185065"
misc_feature complement(order(1348852..1348857,1348864..1348869,
1348876..1348881,1348885..1348890,1348897..1348902,
1348930..1348935,1348960..1348965,1348972..1348983,
1349002..1349004,1349011..1349016,1349056..1349058,
1349107..1349109,1349116..1349121,1349131..1349133,
1349137..1349142,1349149..1349151,1349155..1349157,
1349161..1349166,1349350..1349352,1349356..1349361,
1349368..1349397,1349401..1349412,1349443..1349445,
1349458..1349463,1349470..1349475))
/gene="sapB"
/locus_tag="SF1298"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(1348966..1348983,1349350..1349394))
/gene="sapB"
/locus_tag="SF1298"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(1348900..1348902,1348930..1348932,
1348939..1348941,1348963..1348965,1349179..1349181,
1349350..1349352))
/gene="sapB"
/locus_tag="SF1298"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(1349035..1349037,1349047..1349052,
1349068..1349106))
/gene="sapB"
/locus_tag="SF1298"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(1349739..1351382)
/gene="sapA"
/locus_tag="SF1299"
/db_xref="GeneID:1024271"
CDS complement(1349739..1351382)
/gene="sapA"
/locus_tag="SF1299"
/note="Code: EP; COG: COG0747"
/codon_start=1
/transl_table=11
/product="antimicrobial peptide ABC transporter
substrate-binding protein SapA"
/protein_id="NP_707203.1"
/db_xref="GeneID:1024271"
/translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV
NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSV
RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
TAETAASILPRASWAYDNEAKITEYNPAKSREQLKALGLENLTLKLWVPTRSQAWNPS
PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
LLSCAAIHSQTNLAHWCNPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
misc_feature complement(1349742..1351382)
/gene="sapA"
/locus_tag="SF1299"
/note="antimicrobial peptide ABC transporter periplasmic
binding protein SapA; Provisional; Region: PRK15109"
/db_xref="CDD:185064"
gene complement(1351695..1351940)
/gene="ymjA"
/locus_tag="SF1300"
/db_xref="GeneID:1024256"
CDS complement(1351695..1351940)
/gene="ymjA"
/locus_tag="SF1300"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707204.1"
/db_xref="GeneID:1024256"
/translation="MNHDIPLKYFDIADEYATECAEPVAEAERTPLAHYFQLLLTRLM
NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
misc_feature complement(1351698..1351940)
/gene="ymjA"
/locus_tag="SF1300"
/note="Protein of unknown function (DUF2543); Region:
DUF2543; pfam10820"
/db_xref="CDD:431510"
gene complement(1352074..1353459)
/gene="ycjJ"
/locus_tag="SF1301"
/db_xref="GeneID:1023365"
CDS complement(1352074..1353459)
/gene="ycjJ"
/locus_tag="SF1301"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="amino acid/amine transport protein"
/protein_id="NP_707205.2"
/db_xref="GeneID:1023365"
/translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF
GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMV
GWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN
TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF
LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA
LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH
PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMN
KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL
YEGDRTPVSET"
misc_feature complement(1352095..1353429)
/gene="ycjJ"
/locus_tag="SF1301"
/note="Serine transporter YbeC, amino acid:H+ symporter
family [Amino acid transport and metabolism]; Region:
PotE; COG0531"
/db_xref="CDD:440297"
gene complement(1353762..1355180)
/locus_tag="SF1302"
/db_xref="GeneID:1024230"
CDS complement(1353762..1355180)
/locus_tag="SF1302"
/note="Code: E; COG: COG0174"
/codon_start=1
/transl_table=11
/product="glutamine synthetase"
/protein_id="NP_707206.2"
/db_xref="GeneID:1024230"
/translation="METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLL
TDLNGCFRGKCKPVSSLYKLDTRRYLVASIFALNILGNVVEEAGLGQEMGEPDRTCVP
VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
EFYLLDRQRDAEGDLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP
ADGAVAEASPGQFEINLYHTDNVLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEH
AGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR
FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYHVAGADANPYLVMAAIFAGILH
GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
DELLQFERLITETEIEWMLKNA"
misc_feature complement(1353774..1355108)
/locus_tag="SF1302"
/note="Glutamine synthetase [Amino acid transport and
metabolism]; Region: GlnA; COG0174"
/db_xref="CDD:439944"
gene 1355380..1356156
/gene="puuD"
/locus_tag="SF1303"
/db_xref="GeneID:1027800"
CDS 1355380..1356156
/gene="puuD"
/locus_tag="SF1303"
/note="Code: R; COG: COG2071"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
/protein_id="NP_707207.2"
/db_xref="GeneID:1027800"
/translation="MRLSMENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGG
LPIALPHALAEPSLLEQLLPKLDGIYLPSSPSNVQPHLYGENGDEPDADPGRDLLSMA
IINAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPS
HEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHP
FALGVQWHPEWNSSEYALSRILFEGFITAWQHHIAEKQRL"
misc_feature 1355392..1356153
/gene="puuD"
/locus_tag="SF1303"
/note="gamma-glutamyl-gamma-aminobutyrate hydrolase;
Provisional; Region: puuD; PRK11366"
/db_xref="CDD:183101"
gene 1356183..1356740
/gene="ycjC"
/locus_tag="SF1304"
/db_xref="GeneID:1024243"
CDS 1356183..1356740
/gene="ycjC"
/locus_tag="SF1304"
/note="Code: K; COG: COG1396"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor PuuR"
/protein_id="NP_707208.1"
/db_xref="GeneID:1024243"
/translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT
GIPHSFSNTSAGICRIISAHTPTTF"
misc_feature 1356183..1356737
/gene="ycjC"
/locus_tag="SF1304"
/note="HTH-type transcriptional regulator PuuR; Region:
PRK09943"
/db_xref="CDD:182158"
gene 1356890..1358377
/gene="aldH"
/locus_tag="SF1305"
/db_xref="GeneID:1024250"
CDS 1356890..1358377
/gene="aldH"
/locus_tag="SF1305"
/note="Code: C; COG: COG1012"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl-gamma-aminobutyraldehyde
dehydrogenase"
/protein_id="NP_707209.2"
/db_xref="GeneID:1024250"
/translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLN
VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV
FADCPDLQKAASATAAGIFYNQGQVRIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
LDPATTMGTLIDSAHADSVHTFIREGEGKGQLLLDGRNAGLAAAIGPTIFVDVDPNAS
LSREEIFGPVLVVTRFTSEDQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVF
VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
misc_feature 1356890..1358371
/gene="aldH"
/locus_tag="SF1305"
/note="gamma-glutamyl-gamma-aminobutyraldehyde
dehydrogenase; Provisional; Region: PRK09847"
/db_xref="CDD:182108"
misc_feature order(1357379..1357393,1357415..1357417,1357460..1357462,
1357466..1357471,1357613..1357624,1357631..1357633,
1357640..1357645,1357688..1357696,1357793..1357795,
1358078..1358080,1358084..1358086,1358162..1358164,
1358276..1358278)
/gene="aldH"
/locus_tag="SF1305"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143430"
misc_feature order(1357391..1357393,1357688..1357690,1357784..1357786,
1357793..1357795)
/gene="aldH"
/locus_tag="SF1305"
/note="catalytic residues [active]"
/db_xref="CDD:143430"
gene 1358379..1359659
/gene="ordL"
/locus_tag="SF1306"
/db_xref="GeneID:1024247"
CDS 1358379..1359659
/gene="ordL"
/locus_tag="SF1306"
/note="Code: E; COG: COG0665"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707210.1"
/db_xref="GeneID:1024247"
/translation="MTEHTSSYYAASANKYAPFDTLNESITCDVCVVGGGYTGLSSAL
HLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFE
GGEIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWVRYGNKQLELLDVNAI
RREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVV
RTANGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNY
CVEDCNYLLDYYRLTADNRLLYGGGVVYGARNPDDVERLVVPKLLKTFPQLKGVKIDY
RWTGNFLLTLSHMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAF
ANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV"
misc_feature 1358454..1359557
/gene="ordL"
/locus_tag="SF1306"
/note="Glycine/D-amino acid oxidase (deaminating) [Amino
acid transport and metabolism]; Region: DadA; COG0665"
/db_xref="CDD:440429"
gene 1359697..1360962
/gene="goaG"
/locus_tag="SF1307"
/db_xref="GeneID:1024259"
CDS 1359697..1360962
/gene="goaG"
/locus_tag="SF1307"
/note="Code: E; COG: COG0160"
/codon_start=1
/transl_table=11
/product="4-aminobutyrate transaminase"
/protein_id="NP_707211.1"
/db_xref="GeneID:1024259"
/translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID
FAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINTLAPVSGQA
KTAFFTTGAEAVENAVKIARAHTGRPSVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP
FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGECGFNVAPK
ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLS
GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL
IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG
NVIRFLYPLTIPDAQFDAAMKILQDALSD"
misc_feature 1359697..1360959
/gene="goaG"
/locus_tag="SF1307"
/note="4-aminobutyrate transaminase; Provisional; Region:
PRK09792"
/db_xref="CDD:182078"
misc_feature order(1360021..1360029,1360105..1360110,1360114..1360116,
1360309..1360311,1360408..1360410,1360414..1360419,
1360495..1360497)
/gene="goaG"
/locus_tag="SF1307"
/note="inhibitor-cofactor binding pocket [active]"
/db_xref="CDD:99735"
misc_feature order(1360024..1360029,1360105..1360110,1360309..1360311,
1360408..1360410,1360417..1360419,1360495..1360497)
/gene="goaG"
/locus_tag="SF1307"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature 1360495..1360497
/gene="goaG"
/locus_tag="SF1307"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene complement(1361082..1362074)
/gene="pspF"
/locus_tag="SF1308"
/db_xref="GeneID:1024240"
CDS complement(1361082..1362074)
/gene="pspF"
/locus_tag="SF1308"
/note="Code: O; COG: COG1221"
/codon_start=1
/transl_table=11
/product="psp operon transcriptional activator"
/protein_id="NP_707212.3"
/db_xref="GeneID:1024240"
/translation="MANFIMAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERG
TGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKLHPGRFE
RADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAM
VNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERA
RETLLNYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEEAIAVSENTS
LPTLPLDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
misc_feature complement(1361085..1362059)
/gene="pspF"
/locus_tag="SF1308"
/note="phage shock protein operon transcriptional
activator; Provisional; Region: pspF; PRK11608"
/db_xref="CDD:236936"
gene 1362226..1362894
/gene="pspA"
/locus_tag="SF1309"
/db_xref="GeneID:1024253"
CDS 1362226..1362894
/gene="pspA"
/locus_tag="SF1309"
/note="Code: I; COG: COG1842"
/codon_start=1
/transl_table=11
/product="phage shock protein PspA"
/protein_id="NP_707213.1"
/db_xref="GeneID:1024253"
/translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
SLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
QDNQ"
misc_feature 1362226..1362891
/gene="pspA"
/locus_tag="SF1309"
/note="phage shock protein PspA; Provisional; Region:
PRK10698"
/db_xref="CDD:182657"
gene 1362948..1363172
/gene="pspB"
/locus_tag="SF1310"
/db_xref="GeneID:1024284"
CDS 1362948..1363172
/gene="pspB"
/locus_tag="SF1310"
/codon_start=1
/transl_table=11
/product="phage shock protein B"
/protein_id="NP_707214.1"
/db_xref="GeneID:1024284"
/translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA
QLVDEAKRMRERIQALESILDAEHPNWRDR"
misc_feature 1362948..1363169
/gene="pspB"
/locus_tag="SF1310"
/note="envelope stress response membrane protein PspB;
Region: pspB; PRK09458"
/db_xref="CDD:236526"
gene 1363172..1363531
/gene="pspC"
/locus_tag="SF1311"
/db_xref="GeneID:1024257"
CDS 1363172..1363531
/gene="pspC"
/locus_tag="SF1311"
/note="Code: KT; COG: COG1983"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator PspC"
/protein_id="NP_707215.1"
/db_xref="GeneID:1024257"
/translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
RYVTSDTFTLRSRFRQL"
misc_feature 1363175..1363528
/gene="pspC"
/locus_tag="SF1311"
/note="envelope stress response membrane protein PspC;
Region: PRK10697"
/db_xref="CDD:182656"
gene 1363540..1363761
/gene="pspD"
/locus_tag="SF1312"
/db_xref="GeneID:1024261"
CDS 1363540..1363761
/gene="pspD"
/locus_tag="SF1312"
/codon_start=1
/transl_table=11
/product="peripheral inner membrane phage-shock protein"
/protein_id="NP_707216.2"
/db_xref="GeneID:1024261"
/translation="MNTRWQQAGQKVKLGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
RRPLKMLLAVALEPLLSRAANKLAQRYKR"
misc_feature 1363540..1363758
/gene="pspD"
/locus_tag="SF1312"
/note="phage shock protein PspD; Region: PRK10497"
/db_xref="CDD:182498"
gene 1363804..1364151
/gene="pspE"
/locus_tag="SF1313"
/db_xref="GeneID:1024353"
CDS 1363804..1364151
/gene="pspE"
/locus_tag="SF1313"
/note="Code: P; COG: COG0607"
/codon_start=1
/transl_table=11
/product="thiosulfate:cyanide sulfurtransferase"
/protein_id="NP_707217.1"
/db_xref="GeneID:1024353"
/translation="MAIFIHRRTLTCLKKGLLALALVFSLPVFAAEHWIDVRVPEQYQ
QEHVQGAINIPLKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKELLSEMGYTHVENA
GGLKDIAMPKVKG"
misc_feature 1363840..1364148
/gene="pspE"
/locus_tag="SF1313"
/note="thiosulfate:cyanide sulfurtransferase; Provisional;
Region: PRK10287"
/db_xref="CDD:182356"
misc_feature 1364035..1364037
/gene="pspE"
/locus_tag="SF1313"
/note="active site residue [active]"
/db_xref="CDD:238089"
gene 1364336..1366805
/gene="ycjM"
/locus_tag="SF1314"
/pseudo
/db_xref="GeneID:1024249"
misc_feature 1364336..1366805
/gene="ycjM"
/locus_tag="SF1314"
/note="Similar to Escherichia coli K12 polysaccharide
hydrolase gi: 1787568 (569 aa). BLAST with identity of 93%
in 823 aa. This CDS has been disrupted by insertion. The
sequence has been checked and is believed to be correct."
/pseudo
mobile_element 1365467..1365978
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene 1365522..1365797
/gene="insA"
/locus_tag="SF1315"
/db_xref="GeneID:1024251"
CDS 1365522..1365797
/gene="insA"
/locus_tag="SF1315"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707218.1"
/db_xref="GeneID:1024251"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1365543..>1365794
/gene="insA"
/locus_tag="SF1315"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
mobile_element 1365979..1366221
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene 1366819..1368102
/locus_tag="SF1316"
/pseudo
/db_xref="GeneID:1024315"
misc_feature 1366819..1368102
/locus_tag="SF1316"
/note="Similar to Escherichia coli K12 transport
periplasmic protein gi: 1787569 (431 aa). BLAST with
identity of 95% in 428 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 1368123..1369004
/gene="ycjO"
/locus_tag="SF1317"
/db_xref="GeneID:1024280"
CDS 1368123..1369004
/gene="ycjO"
/locus_tag="SF1317"
/note="Code: G; COG: COG1175"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="NP_707219.1"
/db_xref="GeneID:1024280"
/translation="MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRL
PLNPNIESTFVGVSNYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREF
RLRKTARSLVILSYVTPSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPG
SSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMP
VLATVVTLRTIWMFYMFADVYLLTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIII
FAVILLTRKRVNLNGNK"
misc_feature 1368207..1368986
/gene="ycjO"
/locus_tag="SF1317"
/note="ABC-type sugar transport system, permease component
[Carbohydrate transport and metabolism]; Region: UgpA;
COG1175"
/db_xref="CDD:440788"
gene 1368991..1369833
/gene="ycjP"
/locus_tag="SF1318"
/db_xref="GeneID:1024352"
CDS 1368991..1369833
/gene="ycjP"
/locus_tag="SF1318"
/note="Code: G; COG: COG0395"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_707220.1"
/db_xref="GeneID:1024352"
/translation="MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKSAKEAIS
LHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSMVVSVVSSVVAVFLGILGAYALSRL
RFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFM
LKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFAS
IFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALLERFIKSGLTAG
GVKG"
misc_feature 1368994..1369830
/gene="ycjP"
/locus_tag="SF1318"
/note="ABC-type glycerol-3-phosphate transport system,
permease component [Carbohydrate transport and
metabolism]; Region: UgpE; COG0395"
/db_xref="CDD:440164"
gene 1369864..1370916
/gene="ycjQ"
/locus_tag="SF1319"
/db_xref="GeneID:1023364"
CDS 1369864..1370916
/gene="ycjQ"
/locus_tag="SF1319"
/note="Code: ER; COG: COG1063"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707221.1"
/db_xref="GeneID:1023364"
/translation="MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVD
FRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVG
DSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYNPAQFAMSGVRDANVRVGDF
VVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGTDVGKEI
KTLTGKQGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNN
AKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLIDPVVTFANSPESYMQ
YVDQHPEQSIKMGVTF"
misc_feature 1370098..1370913
/gene="ycjQ"
/locus_tag="SF1319"
/note="2-desacetyl-2-hydroxyethyl bacteriochlorophyllide
and other MDR family members; Region:
2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_;
cd08255"
/db_xref="CDD:176217"
misc_feature order(1370284..1370286,1370296..1370298,1370356..1370373,
1370428..1370433,1370443..1370445,1370497..1370499,
1370560..1370565,1370569..1370571,1370629..1370634,
1370710..1370718)
/gene="ycjQ"
/locus_tag="SF1319"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176217"
gene 1370934..1371709
/locus_tag="SF1320"
/pseudo
/db_xref="GeneID:1024282"
misc_feature 1371230..1371709
/locus_tag="SF1320"
/note="Similar to Escherichia coli K12 transient receptor
potential locus gi: 1787573 (266 aa). BLAST with identity
of 96% in 160 aa. This CDS contains an in-frame stop
codon. The sequence has been checked and is believed to be
correct."
/pseudo
gene 1371719..1372773
/gene="ycjS"
/locus_tag="SF1321"
/pseudo
/db_xref="GeneID:1026335"
misc_feature 1371719..1372773
/gene="ycjS"
/locus_tag="SF1321"
/note="Similar to Escherichia coli K12 dehydrogenase gi:
1787574 (352 aa). BLAST with identity of 98% in 352 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 1372770..1375037
/gene="ycjT"
/locus_tag="SF1322"
/db_xref="GeneID:1024255"
CDS 1372770..1375037
/gene="ycjT"
/locus_tag="SF1322"
/note="Code: G; COG: COG1554"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707222.2"
/db_xref="GeneID:1024255"
/translation="MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQ
TRGMYLAGLYHRAGKGEINELVNLPDILGMEIAINGEVFSLSREAWQRELDFASGELR
RSVVWRTSNGAGYTIASRRFVSADQLPLIALEITIMPLDADASVLISTGIDATQTNHG
RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCQVSGDVQQCYTAKERRLLQHTS
TQLHAGETVTLQKLVWIDWRDDRQAALDEWGSVSLRQLEMCAQQSYDQHLAASTENWR
QWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHGERSSIAAKGLTGEGYKGHVFWD
TEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETP
EFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAK
FWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAFTSYMVYYNVQQALSIARQFGCSDDA
FIHRAEMFLKELRLPEIQPDGVLPQDDSFMTKPAINLAKYKAAAGKQTILLDYSRAEV
NEMQILKQADVVMLNYMLPEQFSSASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGL
LTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPA
LLEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLDGQLISVAEESVFCLGDF
ILPFNGTATTHQEDE"
misc_feature 1372785..1374959
/gene="ycjT"
/locus_tag="SF1322"
/note="Kojibiose phosphorylase YcjT [Carbohydrate
transport and metabolism]; Region: ATH1; COG1554"
/db_xref="CDD:441163"
gene 1375034..1375693
/gene="ycjU"
/locus_tag="SF1323"
/db_xref="GeneID:1024309"
CDS 1375034..1375693
/gene="ycjU"
/locus_tag="SF1323"
/note="Code: R; COG: COG0637"
/codon_start=1
/transl_table=11
/product="beta-phosphoglucomutase"
/protein_id="NP_707223.1"
/db_xref="GeneID:1024309"
/translation="MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESL
KGISRDESLRRILQHGGKEGDFNPQERAQLAYRKNLLYVHSLRELTVNAVLPGIRNLL
AELRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL
GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQN
V"
misc_feature 1375046..1375606
/gene="ycjU"
/locus_tag="SF1323"
/note="beta-phosphoglucomutase; Region: bPGM; TIGR01990"
/db_xref="CDD:213672"
gene 1375707..1376675
/gene="ycjV"
/locus_tag="SF1324"
/db_xref="GeneID:1024286"
CDS 1375707..1376675
/gene="ycjV"
/locus_tag="SF1324"
/note="Code: G; COG: COG1130"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_707224.1"
/db_xref="GeneID:1024286"
/translation="MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKS
TTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLK
MQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDE
PLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMAARIVIMKDGIVQQVGA
PKTVYNQPANMFVAGFIGSPAMNFIRGTIDGDKFVTETLKLTILEEKLAVLKTQESLH
KPIVMGIRPEDIHPDAQEENNISAKISVAELTGAEFMLYTTVGGTS"
misc_feature 1375707..1376672
/gene="ycjV"
/locus_tag="SF1324"
/note="ABC-type sugar transport system, ATPase component
MalK [Carbohydrate transport and metabolism]; Region:
MalK; COG3839"
/db_xref="CDD:443050"
gene 1376831..1377733
/gene="ompG"
/locus_tag="SF1325"
/pseudo
/db_xref="GeneID:1024310"
misc_feature 1376831..1377733
/gene="ompG"
/locus_tag="SF1325"
/note="Similar to Escherichia coli K12 outer membrane
protein gi: 1787579 (302 aa). BLAST with identity of 98%
in 301 aa. This CDS has been truncated. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(1377844..1378842)
/gene="ycjW"
/locus_tag="SF1326"
/db_xref="GeneID:1024304"
CDS complement(1377844..1378842)
/gene="ycjW"
/locus_tag="SF1326"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="LACI-type transcriptional regulator"
/protein_id="NP_707225.1"
/db_xref="GeneID:1024304"
/translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL
QYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQT
SHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHV
YSVDTDNFGDSIALTDALIESGHQNIACLHAPLDVHVSVDRVNGYKQSLSAHNIAVRD
KWIVDGGYTHETALQAARQLLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAV
VGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK"
misc_feature complement(1377859..1378836)
/gene="ycjW"
/locus_tag="SF1326"
/note="DNA-binding transcriptional regulator, LacI/PurR
family [Transcription]; Region: PurR; COG1609"
/db_xref="CDD:441217"
gene 1378998..1380395
/gene="ycjX"
/locus_tag="SF1327"
/db_xref="GeneID:1024303"
CDS 1378998..1380395
/gene="ycjX"
/locus_tag="SF1327"
/note="Code: R; COG: COG3106"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707226.1"
/db_xref="GeneID:1024303"
/translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
NGQRGEWSAKWRMMCEGLDPLAPADENRLADIAAVWTDYLHHCKQQGLHFIQPGRFVL
PGDMAGAPALQFFPWPDVDAWDESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
AAMKADHVTVDQHANMVSLLQQLIQDAWQNAAFERISMDCLGLASVQATTSGIIDVNG
EKIPALRGNRLSDGALLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
RLDAALEFLIGDKLR"
misc_feature 1378998..1380392
/gene="ycjX"
/locus_tag="SF1327"
/note="Ras-like GTP-binding stress-induced protein YcjX,
DUF463 family [Signal transduction mechanisms]; Region:
YcjX; COG3106"
/db_xref="CDD:442340"
gene 1380392..1381453
/gene="ycjF"
/locus_tag="SF1328"
/db_xref="GeneID:1024281"
CDS 1380392..1381453
/gene="ycjF"
/locus_tag="SF1328"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707227.1"
/db_xref="GeneID:1024281"
/translation="MTEPLKPRIDFDGPLEVEQNPKFRAQQTFDENQAQNFAPATLDE
AQEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGIQWTMNAWQTQDWVAL
GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMI
AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
EVGMDWMSQDLAARLSTRAAQGIGAGLLTVRLGIKAMELCRPLPWIDDDKPRLGDFRR
QLIGQVKETLQKGKTPSEK"
misc_feature 1380551..1381414
/gene="ycjF"
/locus_tag="SF1328"
/note="TIGR01620 family protein; Region: hyp_HI0043"
/db_xref="CDD:130681"
gene 1381601..1383142
/gene="tyrR"
/locus_tag="SF1329"
/db_xref="GeneID:1024252"
CDS 1381601..1383142
/gene="tyrR"
/locus_tag="SF1329"
/note="Code: K; COG: COG3283"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator TyrR"
/protein_id="NP_707228.2"
/db_xref="GeneID:1024252"
/translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
VICATQKNLVELVQKGVFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
KKNEE"
misc_feature 1381601..1383139
/gene="tyrR"
/locus_tag="SF1329"
/note="transcriptional regulator TyrR; Region: PRK10820"
/db_xref="CDD:236769"
gene complement(1383186..1383692)
/gene="tpx"
/locus_tag="SF1330"
/db_xref="GeneID:1024307"
CDS complement(1383186..1383692)
/gene="tpx"
/locus_tag="SF1330"
/note="Code: O; COG: COG2077"
/codon_start=1
/transl_table=11
/product="2-Cys peroxiredoxin"
/protein_id="NP_707229.1"
/db_xref="GeneID:1024307"
/translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
VITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
AALAVLKA"
misc_feature complement(1383189..1383689)
/gene="tpx"
/locus_tag="SF1330"
/note="thiol peroxidase; Region: tpx; PRK00522"
/db_xref="CDD:179055"
misc_feature complement(order(1383306..1383311,1383366..1383368,
1383414..1383416,1383432..1383437,1383522..1383524,
1383528..1383530))
/gene="tpx"
/locus_tag="SF1330"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239312"
misc_feature complement(order(1383294..1383296,1383510..1383512,
1383519..1383521))
/gene="tpx"
/locus_tag="SF1330"
/note="catalytic triad [active]"
/db_xref="CDD:239312"
misc_feature complement(order(1383408..1383410,1383510..1383512))
/gene="tpx"
/locus_tag="SF1330"
/note="peroxidatic and resolving cysteines [active]"
/db_xref="CDD:239312"
gene 1383811..1384776
/gene="ycjG"
/locus_tag="SF1331"
/db_xref="GeneID:1027796"
CDS 1383811..1384776
/gene="ycjG"
/locus_tag="SF1331"
/note="Code: H; COG: COG1441"
/codon_start=1
/transl_table=11
/product="L-Ala-D/L-Glu epimerase"
/protein_id="NP_707230.2"
/db_xref="GeneID:1027796"
/translation="MRIVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGE
CTPYPRYGESDASVMAQIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARK
QQQSLADLIGITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISER
MVAIRTAVPDATLIVDANESWRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIH
PLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCM
LCTSRAISAALPLVPQVSFADLDGPTWLAVDVEPALQFTTGELHL"
misc_feature 1383811..1384773
/gene="ycjG"
/locus_tag="SF1331"
/note="L-Ala-D/L-Glu epimerase; Provisional; Region:
PRK15129"
/db_xref="CDD:185083"
gene complement(1384751..1385479)
/gene="ycjI"
/locus_tag="SF1332"
/db_xref="GeneID:1024279"
CDS complement(1384751..1385479)
/gene="ycjI"
/locus_tag="SF1332"
/note="Code: E; COG: COG2866"
/codon_start=1
/transl_table=11
/product="murein peptide amidase A"
/protein_id="NP_707231.2"
/db_xref="GeneID:1024279"
/translation="MTVTRSRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI
LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP
AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
ACIEDPRHNELGEWLAQSFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDE
ASEKYLFAMANLLRWHPKDAIRPS"
misc_feature complement(1384769..1385479)
/gene="ycjI"
/locus_tag="SF1332"
/note="murein tripeptide amidase MpaA; Region: PRK10602"
/db_xref="CDD:182582"
misc_feature complement(order(1384850..1384852,1384919..1384921,
1384991..1384993,1385006..1385011,1385183..1385188,
1385213..1385215,1385324..1385326,1385333..1385335))
/gene="ycjI"
/locus_tag="SF1332"
/note="active site"
/db_xref="CDD:349475"
gene complement(1385770..1386408)
/locus_tag="SF1333"
/db_xref="GeneID:1024302"
CDS complement(1385770..1386408)
/locus_tag="SF1333"
/note="Code: R; COG: COG2910"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707232.2"
/db_xref="GeneID:1024302"
/translation="MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP
TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVL
SLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYE
LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGDKPFFM"
misc_feature complement(1385797..1386405)
/locus_tag="SF1333"
/note="atypical (a) SDRs, subgroup 6; Region: SDR_a6;
cd05267"
/db_xref="CDD:187577"
misc_feature complement(order(1385956..1385967,1386022..1386024,
1386034..1386036,1386100..1386108,1386184..1386192,
1386304..1386312,1386370..1386372,1386376..1386381,
1386385..1386387))
/locus_tag="SF1333"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187577"
gene complement(1386426..1386956)
/locus_tag="SF1334"
/db_xref="GeneID:1024374"
CDS complement(1386426..1386956)
/locus_tag="SF1334"
/note="Code: R; COG: COG1073"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707233.1"
/db_xref="GeneID:1024374"
/translation="MSITGVNIGRLFREGFSNYDPIGVLNAMASQRAKEARGGELQIN
ELLPASLDAAKAHGLTERDVYEATDYYKTPRGQQPGGATKMLFSHAQKTLAWDAFAFT
EVLLTQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQLVSLPDFSHYELYDKPEAV
QEALAKVIPFFNTHLG"
misc_feature complement(1386432..>1386680)
/locus_tag="SF1334"
/note="Fermentation-respiration switch esterase FrsA,
DUF1100 family [Signal transduction mechanisms]; Region:
FrsA; COG1073"
/db_xref="CDD:440691"
mobile_element complement(1387090..1388463)
/mobile_element_type="insertion sequence:ISSfl2"
gene 1387236..1388432
/locus_tag="SF1335"
/db_xref="GeneID:1024278"
CDS 1387236..1388432
/locus_tag="SF1335"
/note="Code: L; COG: COG3547"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl2 transposase"
/protein_id="NP_707234.1"
/db_xref="GeneID:1024278"
/translation="MTESSDYESVQVFIGVDVGKDTHHAVTINRSGKRVFDKALPNDE
NKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAG
EAKTDARNAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIR
GLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKR
LAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYP
VLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGN
KALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQALIALARRRCDVLFAMMRDGTF
YTPQGS"
misc_feature 1387272..1388408
/locus_tag="SF1335"
/note="IS110 family transposase; Region: transpos_IS110;
NF033542"
/db_xref="CDD:468073"
gene complement(1388446..1388808)
/locus_tag="SF1336"
/pseudogene="unknown"
/db_xref="GeneID:1024285"
gene complement(1388808..1389728)
/gene="ycjY"
/locus_tag="SF1337"
/db_xref="GeneID:1024301"
CDS complement(1388808..1389728)
/gene="ycjY"
/locus_tag="SF1337"
/note="Code: R; COG: COG1073"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707236.1"
/db_xref="GeneID:1024301"
/translation="MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYPAIVVSHPGG
GVKEQTAGTYAEKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDVSAVIDYLTT
LSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSID
ALPHIEAGSNARTSDISSEEYAIMPLAPMKEADAPNEELRQAWEYYHTPRAQYPTAPG
YATLRSLNQIITYDAYHMAEVYLTQPMQIVAGSQAGSKWMSDDLYDRASSQDKRYHIV
EGANHMDLYDGKAYVAEAISVLAPFFEETL"
misc_feature complement(1388811..1389728)
/gene="ycjY"
/locus_tag="SF1337"
/note="Fermentation-respiration switch esterase FrsA,
DUF1100 family [Signal transduction mechanisms]; Region:
FrsA; COG1073"
/db_xref="CDD:440691"
gene 1389866..1390348
/gene="ycjZ"
/locus_tag="SF1338"
/pseudo
/db_xref="GeneID:1024380"
misc_feature 1389866..1390348
/gene="ycjZ"
/locus_tag="SF1338"
/note="Similar to Escherichia coli K12 transcriptional
regulator LYSR-type gi: 1787589 (300 aa). BLAST with
identity of 97% in 145 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element complement(1390302..1391565)
/mobile_element_type="insertion sequence:IS600"
gene complement(1390345..1391163)
/locus_tag="SF1339"
/db_xref="GeneID:1024272"
CDS complement(1390345..1391163)
/locus_tag="SF1339"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707237.1"
/db_xref="GeneID:1024272"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHYSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(1390372..>1391163)
/locus_tag="SF1339"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1391199..1391501)
/locus_tag="SF1340"
/db_xref="GeneID:1024407"
CDS complement(1391199..1391501)
/locus_tag="SF1340"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707238.1"
/db_xref="GeneID:1024407"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(1391229..1391501)
/locus_tag="SF1340"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
misc_feature 1391566..1394089
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787622 (286 aa). BLAST with
identity of 96% in 841 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
mobile_element complement(1392018..1393348)
/mobile_element_type="insertion sequence:IS2"
gene complement(1392029..1392934)
/locus_tag="SF1342"
/db_xref="GeneID:1024267"
CDS complement(1392029..1392934)
/locus_tag="SF1342"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707239.1"
/db_xref="GeneID:1024267"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(1392032..1392934)
/locus_tag="SF1342"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(1392892..1393302)
/locus_tag="SF1343"
/db_xref="GeneID:1024275"
CDS complement(1392892..1393302)
/locus_tag="SF1343"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707240.3"
/db_xref="GeneID:1024275"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(1392895..1393257)
/locus_tag="SF1343"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 1394096..1394842
/locus_tag="SF1344"
/db_xref="GeneID:1024375"
CDS 1394096..1394842
/locus_tag="SF1344"
/codon_start=1
/transl_table=11
/product="DnaC-like chromosome replication protein"
/protein_id="NP_707241.4"
/db_xref="GeneID:1024375"
/translation="MKNIATGGVLERIRRLTPPYVTAPFRTVAEWREWQLAEGQKRCE
EINRLNRQLRVEKILNRSGIQPLHRKCSFANYRAQNDGQRHALSQAKSIADELMTGCT
NFVFSGKPGTGKNHLAAAIGNRLMAKGRSVIIVTVSDVMSVLHESYDNGKSGEKFLQE
LCGVDLLVLDEIGMQRDTKNEQVVLNQIVDRRTASLRGVGMLTNINHAAMNTLLGERV
MDRMVMNGGRWVNFNWESWRPNVSHSRVVK"
misc_feature 1394096..1394839
/locus_tag="SF1344"
/note="putative replication protein; Provisional; Region:
PRK12377"
/db_xref="CDD:183482"
misc_feature 1394417..1394440
/locus_tag="SF1344"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(1394420..1394443,1394603..1394605)
/locus_tag="SF1344"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 1394591..1394608
/locus_tag="SF1344"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
gene 1394857..1395279
/locus_tag="SF1345"
/db_xref="GeneID:1024330"
CDS 1394857..1395279
/locus_tag="SF1345"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707242.1"
/db_xref="GeneID:1024330"
/translation="MAKPFTPEQREELKTRIVELVHQDGRVTIRQLSDETGISRASVG
RLCIELVASGDVYNSGYGLFPSEQARKDWQSARKKLSRVKVRKPVVVDPDLIWSLPDR
EIRRYDRRLNIICRECRKSEAMQRVLAFYQGNFQEAIL"
misc_feature 1394857..1395264
/locus_tag="SF1345"
/note="Bacterial protein of unknown function (DUF977);
Region: DUF977; pfam06163"
/db_xref="CDD:310626"
gene 1395280..1395693
/locus_tag="SF1346"
/db_xref="GeneID:1024350"
CDS 1395280..1395693
/locus_tag="SF1346"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707243.1"
/db_xref="GeneID:1024350"
/translation="MKLAIRLQLPLAFASKERSMEIKPEDELSNIVLFPIKEDDPRNQ
VNFLYKPSERPYCHHASVRVDEKERQVRCKICGAVVEPFDWMLSVAKRETRLADDVRL
LRQEEQERRRNIEKLIQIERNAKARIRRATKSRTE"
gene 1395786..1396004
/locus_tag="SF1347"
/db_xref="GeneID:1023742"
CDS 1395786..1396004
/locus_tag="SF1347"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707244.1"
/db_xref="GeneID:1023742"
/translation="MVTLFRKKYPRKSRTTEFLFLILFIVLMTPISPQIFVWIIGKII
EPVIELYNDVVWASFNTLHNKINPYKES"
misc_feature 1395786..1395998
/locus_tag="SF1347"
/note="Protein of unknown function (DUF4014); Region:
DUF4014; pfam13198"
/db_xref="CDD:338629"
gene 1396006..1396371
/locus_tag="SF1348"
/db_xref="GeneID:1024377"
CDS 1396006..1396371
/locus_tag="SF1348"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707245.1"
/db_xref="GeneID:1024377"
/translation="MALTKKQRAELRMKFGGRCAYCGCELGEKWHADHVKPVIRFDGN
MLHQERDDISNMVPECHPCNLHKHCSSLEDYRRIISDGRREFLASGKGKALVRMGLVE
MKSDPVVFWFEKYQEGATA"
misc_feature 1396018..1396206
/locus_tag="SF1348"
/note="5-methylcytosine-specific restriction endonuclease
McrA [Defense mechanisms]; Region: McrA; COG1403"
/db_xref="CDD:441013"
gene 1396368..1397033
/locus_tag="SF1349"
/db_xref="GeneID:1026342"
CDS 1396368..1397033
/locus_tag="SF1349"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707246.1"
/db_xref="GeneID:1026342"
/translation="MTTITKERLQWLANISGRDDIDDIDGGEIRELALIALASLEAEP
VAECIVEDGGMCIDGFGEYVGHSLPDGMHELYAAPRMRQPDGWKAVAVAWKVTFTQVD
QESNTFTAIYFYKAEVERWVRLHKACDFRADITPLYAAPAVPVAVNDDMAYAFHHALS
DSSLGSDEIEEIKTGLRAAFANVTIQPEPIVPDEIGPNDSNTFDYVDGWNACRAAMLK
GDK"
gene 1397033..1397398
/locus_tag="SF1350"
/db_xref="GeneID:1024274"
CDS 1397033..1397398
/locus_tag="SF1350"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707247.1"
/db_xref="GeneID:1024274"
/translation="MINRTKLEHILEYARQQKCIGQLCKIPPGDMVEIVEMAMRKAGN
SPVTLAGWISCSDAVPAEYCDVILLDDLGNVFPGSWDKVFCPTRGGNKMAFVDKDGVE
VESSTHWMPLPEPPQEVNQ"
misc_feature 1397183..1397383
/locus_tag="SF1350"
/note="Protein of unknown function (DUF551); Region:
DUF551; pfam04448"
/db_xref="CDD:427954"
gene 1397796..1398008
/locus_tag="SF1350a"
/db_xref="GeneID:16608320"
CDS 1397796..1398008
/locus_tag="SF1350a"
/codon_start=1
/transl_table=11
/product="regulatory protein"
/protein_id="YP_008439244.1"
/db_xref="GeneID:16608320"
/translation="MSHKCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
RKDLCEVRIRTGQTEVAVFTAYEPEE"
misc_feature 1397871..1397993
/locus_tag="SF1350a"
/note="Hok/gef family; Region: HOK_GEF; pfam01848"
/db_xref="CDD:426473"
gene 1398245..1398496
/locus_tag="SF1350b"
/db_xref="GeneID:16608321"
CDS 1398245..1398496
/locus_tag="SF1350b"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439245.1"
/db_xref="GeneID:16608321"
/translation="MDITVCTYKPGGIVEKIKKLFSSKYAVIRRDDLSVIVEMDYFPE
TPKSIMYRNGRKAIFLPMRVSDIMGNDKLLDELRVRASC"
mobile_element complement(1398499..1399266)
/mobile_element_type="insertion sequence:IS1"
gene complement(1398514..1398909)
/gene="insB"
/locus_tag="SF1351"
/db_xref="GeneID:1024273"
CDS complement(1398514..1398909)
/gene="insB"
/locus_tag="SF1351"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707248.1"
/db_xref="GeneID:1024273"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1398517..1398906)
/gene="insB"
/locus_tag="SF1351"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1398936..1399211)
/gene="insA"
/locus_tag="SF1352"
/db_xref="GeneID:1024357"
CDS complement(1398936..1399211)
/gene="insA"
/locus_tag="SF1352"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707249.1"
/db_xref="GeneID:1024357"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQHYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1398939..1399190)
/gene="insA"
/locus_tag="SF1352"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1399345..1399944
/locus_tag="SF1353"
/db_xref="GeneID:1024378"
CDS 1399345..1399944
/locus_tag="SF1353"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707250.1"
/db_xref="GeneID:1024378"
/translation="MAHIQLVKQTSSGLLLPATPESCDFLHQIKIGEWIHADFKRVRN
YAFHKRFFKLLQLGFDYWTPVGGAITPRERKLVSGFVDYLCESVGREHTPALSDAAEQ
YLNTVATCRTRDTALLKSFDAFREWVTIQAGFYTEHIYPDGSRGRRAKSIAFANMDET
EFQQVYKSVLNVLWNWILFRKFSSPEEVENVAAQLLEFA"
misc_feature 1399357..1399938
/locus_tag="SF1353"
/note="Protein of unknown function (DUF1367); Region:
DUF1367; pfam07105"
/db_xref="CDD:429295"
gene 1399944..1400234
/locus_tag="SF1354"
/db_xref="GeneID:1024366"
CDS 1399944..1400234
/locus_tag="SF1354"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707251.1"
/db_xref="GeneID:1024366"
/translation="MVDLRKAARGQMCTVRIPGYCNHNPETSVLAHYRLAGTCGTATK
PHDMQAAIACSSCHDLIDGRVKTSDYTKEELRLMHAEGVFRTQEIWRKEGYL"
misc_feature 1399947..1400225
/locus_tag="SF1354"
/note="Putative nuclease YbcO; Region: YbcO; pfam07102"
/db_xref="CDD:429293"
gene 1400231..1400785
/locus_tag="SF1355"
/db_xref="GeneID:1024349"
CDS 1400231..1400785
/locus_tag="SF1355"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707252.1"
/db_xref="GeneID:1024349"
/translation="MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGGGKTGN
MFNQLLASKKLTKTAVNEALRRMKKAGIEKPELEAFLREMINGKQKTWLAHCTDAEAL
CIDRVISEVLAEHPGLISVLRQRYEGRGMTKRKMAELLNDAHPEWCFRTCCSRVDVWL
NLAEYMLYLPMRDAFSSGDLKTVC"
misc_feature 1400231..1400755
/locus_tag="SF1355"
/note="Protein of unknown function (DUF1133); Region:
DUF1133; pfam06576"
/db_xref="CDD:148278"
mobile_element 1401109..1402372
/mobile_element_type="insertion sequence:IS600"
gene 1401173..1401475
/locus_tag="SF1356"
/db_xref="GeneID:1024356"
CDS 1401173..1401475
/locus_tag="SF1356"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707253.1"
/db_xref="GeneID:1024356"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 1401173..1401445
/locus_tag="SF1356"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1401511..1402329
/locus_tag="SF1357"
/db_xref="GeneID:1024398"
CDS 1401511..1402329
/locus_tag="SF1357"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707254.1"
/db_xref="GeneID:1024398"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKPEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1401511..1402302
/locus_tag="SF1357"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
misc_feature 1402373..1424262
/note="ipaH island II"
gene 1402922..1403293
/locus_tag="SF1359"
/db_xref="GeneID:1024413"
CDS 1402922..1403293
/locus_tag="SF1359"
/codon_start=1
/transl_table=11
/product="tail fiber assembly protein"
/protein_id="NP_707256.1"
/db_xref="GeneID:1024413"
/translation="MVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFV
FDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFS
TITDKSSYNAIEWPASPEGSS"
misc_feature 1402967..1403281
/locus_tag="SF1359"
/note="Caudovirales tail fibre assembly protein, lambda
gpK; Region: Caudo_TAP; cl17077"
/db_xref="CDD:450149"
gene 1403317..1404585
/locus_tag="SF1360"
/db_xref="GeneID:1027508"
CDS 1403317..1404585
/locus_tag="SF1360"
/codon_start=1
/transl_table=11
/product="tail fiber protein"
/protein_id="NP_707257.2"
/db_xref="GeneID:1027508"
/translation="MSVVISGALTDGAGIPMSGYHIILKSRVNPPEVVMNTVADVMTG
NDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDV
VKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAAGYARAAEQAKNDIDAALTGTLKTAN
HLSEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPED
VIRFDTKSDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYR
AKSLTFYGINGPIYHTRYRYWPISRLTDWVKINITTEDIIYRIVASSVRNRWGDPDIG
GLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSE
HSLPGSYCALSGVPDAHVSGAMPGLFIRTS"
misc_feature 1403317..1403706
/locus_tag="SF1360"
/note="Peptidase associated domain: C-terminal domain of
M14 N/E carboxypeptidase; putative folding, regulation, or
interaction domain; Region: Peptidase_M14NE-CP-C_like;
cl21470"
/db_xref="CDD:473874"
gene 1404596..1405159
/locus_tag="SF1361"
/db_xref="GeneID:1024316"
CDS 1404596..1405159
/locus_tag="SF1361"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707258.2"
/db_xref="GeneID:1024316"
/translation="MEIKKIINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQ
QIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKPLTFEWNGRIWNA
GPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDE
IYRRQRELKEELNSLKDLNSVRNFIVE"
misc_feature 1404821..1405144
/locus_tag="SF1361"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
gene complement(1405360..1406217)
/gene="sitD"
/locus_tag="SF1362"
/db_xref="GeneID:1024364"
CDS complement(1405360..1406217)
/gene="sitD"
/locus_tag="SF1362"
/note="Code: P; COG: COG1108"
/codon_start=1
/transl_table=11
/product="iron transporter inner membrane protein"
/protein_id="NP_707259.1"
/db_xref="GeneID:1024364"
/translation="MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMG
DAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGM
FAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS
FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRF
HIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNA
HTQDLLSPN"
misc_feature complement(1405414..1406187)
/gene="sitD"
/locus_tag="SF1362"
/note="ABC-type Mn2+/Zn2+ transport system, permease
component [Inorganic ion transport and metabolism];
Region: ZnuB; COG1108"
/db_xref="CDD:440725"
gene complement(1406214..1407071)
/gene="sitC"
/locus_tag="SF1363"
/db_xref="GeneID:1024595"
CDS complement(1406214..1407071)
/gene="sitC"
/locus_tag="SF1363"
/note="Code: P; COG: COG1108"
/codon_start=1
/transl_table=11
/product="iron ABC transporter permease"
/protein_id="NP_707260.1"
/db_xref="GeneID:1024595"
/translation="MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
ALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFF
GLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF
DENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
RLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRR
AHKALEDRS"
misc_feature complement(1406268..1407044)
/gene="sitC"
/locus_tag="SF1363"
/note="ABC-type Mn2+/Zn2+ transport system, permease
component [Inorganic ion transport and metabolism];
Region: ZnuB; COG1108"
/db_xref="CDD:440725"
gene complement(1407068..1407895)
/gene="sitB"
/locus_tag="SF1364"
/db_xref="GeneID:1024345"
CDS complement(1407068..1407895)
/gene="sitB"
/locus_tag="SF1364"
/note="Code: P; COG: COG1121"
/codon_start=1
/transl_table=11
/product="iron ABC transporter ATP-binding protein"
/protein_id="NP_707261.1"
/db_xref="GeneID:1024345"
/translation="MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGS
GKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVM
MGRYGHMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQ
GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGT
VLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR"
misc_feature complement(1407080..1407895)
/gene="sitB"
/locus_tag="SF1364"
/note="manganese/iron ABC transporter ATP-binding protein;
Region: PRK15056"
/db_xref="CDD:185016"
gene complement(1407895..1408785)
/gene="sitA"
/locus_tag="SF1365"
/db_xref="GeneID:1024343"
CDS complement(1407895..1408785)
/gene="sitA"
/locus_tag="SF1365"
/note="Code: P; COG: COG0803"
/codon_start=1
/transl_table=11
/product="iron ABC transporter substrate-binding protein"
/protein_id="NP_707262.2"
/db_xref="GeneID:1024343"
/translation="MLLGCLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAE
VSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSS
GVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKA
KITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQV
RKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYID
LLKVTTSTLVQGIKAGKREK"
misc_feature complement(1407916..1408782)
/gene="sitA"
/locus_tag="SF1365"
/note="Metal binding protein PsaA. These proteins have
been shown to function as initial receptors in ABC
transport of Mn2+ and as surface adhesins in some
eubacterial species. They belong to the TroA superfamily
of periplasmic metal binding proteins that...; Region:
PsaA; cd01137"
/db_xref="CDD:238557"
misc_feature complement(order(1408000..1408002,1408225..1408227,
1408423..1408425,1408618..1408620))
/gene="sitA"
/locus_tag="SF1365"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238557"
misc_feature complement(1409241..1410820)
/note="Similar to Escherichia coli K12 transposase gi:
1787607 (412 aa). BLAST with identity of 96% in 525 aa.
This CDS has been disrupted by insertion. The sequence has
been checked and is believed to be correct."
mobile_element 1409881..1410648
/mobile_element_type="insertion sequence:IS1"
gene 1409936..1410211
/gene="insA"
/locus_tag="SF1366"
/db_xref="GeneID:1024313"
CDS 1409936..1410211
/gene="insA"
/locus_tag="SF1366"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707263.1"
/db_xref="GeneID:1024313"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1409957..>1410208
/gene="insA"
/locus_tag="SF1366"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1410238..1410633
/gene="insB"
/locus_tag="SF1367"
/db_xref="GeneID:1024597"
CDS 1410238..1410633
/gene="insB"
/locus_tag="SF1367"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707264.1"
/db_xref="GeneID:1024597"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1410241..1410630
/gene="insB"
/locus_tag="SF1367"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
mobile_element complement(1410995..1411844)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(1411037..1411657)
/locus_tag="SF1370"
/db_xref="GeneID:1024414"
CDS complement(1411037..1411657)
/locus_tag="SF1370"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 integrase core
domain-containing protein"
/protein_id="NP_707266.2"
/db_xref="GeneID:1024414"
/translation="MAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPEQLWV
ADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVH
HSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNR
AEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA"
misc_feature complement(1411040..>1411657)
/locus_tag="SF1370"
/note="DDE superfamily endonuclease; Region: DDE_3;
cl46863"
/db_xref="CDD:481203"
mobile_element complement(1411842..1412350)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(1411970..1412296)
/locus_tag="SF1371"
/db_xref="GeneID:1024321"
CDS complement(1411970..1412296)
/locus_tag="SF1371"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_707267.1"
/db_xref="GeneID:1024321"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature complement(1412006..1412293)
/locus_tag="SF1371"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(1412371..1413414)
/locus_tag="SF1372"
/db_xref="GeneID:1024326"
CDS complement(1412371..1413414)
/locus_tag="SF1372"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707268.2"
/db_xref="GeneID:1024326"
/translation="MGFAGDGKTYTASELAIGLVMLMRQRGIEAGNRPVMFLDTETGS
DWVKPRFDAENIELFTAKTRSFVDLLEAINEAESSGSVMIIDSISHFWTGLCDEYARR
RNRKRGLEFSDWAWLKQEWRRFTDRFVNSQAHIIMCGRAGYEYDFFEGDDGKRQLAKT
GIKMKAETETGYEPSIRIQMEKQMNIETGQVWRTARILKDRSTRIDGQVFSNPTFKNF
LPHIESLNLGGEHPGIDTSRDNSELFANDGTPTWLKEKRAKEIALDEIIELLNKHHGG
TSNDAKRAKADLLEKTFTSRSWERIKGMDWPTIKAGRNALWIELEGVEYAFPDPQTQN
ETQQAGYDENIPV"
misc_feature complement(<1412920..1413411)
/locus_tag="SF1372"
/note="N-terminal helicase domain of the DEAD-box helicase
superfamily; Region: DEAD-like_helicase_N; cl28899"
/db_xref="CDD:475120"
gene complement(1413474..1413794)
/locus_tag="SF1373"
/db_xref="GeneID:1024361"
CDS complement(1413474..1413794)
/locus_tag="SF1373"
/codon_start=1
/transl_table=11
/product="host-nuclease inhibitor protein Gam"
/protein_id="NP_707269.1"
/db_xref="GeneID:1024361"
/translation="MSVKLRLPQSAYPIFDRIEEMAWARHYQQIVREEKETELADDLE
KGLPQHLFESLCIDHLQRHGANKQAISHAFDDDVEFQERMAEHIRYMAETIAHHQVDI
DLED"
misc_feature complement(1413480..1413767)
/locus_tag="SF1373"
/note="Host-nuclease inhibitor protein Gam; Region: Gam;
pfam06064"
/db_xref="CDD:399215"
mobile_element 1413769..1415032
/mobile_element_type="insertion sequence:IS600"
gene 1414276..1414989
/locus_tag="SF1374"
/pseudogene="unknown"
/db_xref="GeneID:1024502"
gene complement(1415037..1416461)
/locus_tag="SF1375"
/db_xref="GeneID:1024410"
CDS complement(1415037..1416461)
/locus_tag="SF1375"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease VIII"
/protein_id="NP_707271.1"
/db_xref="GeneID:1024410"
/translation="MNTDKQVYPLYYEAKNDKVRKRLGIKGGFYWAEAKKLSIAISRG
AVAIDDAGYDEDDFKKPVRVNLPVVDDLPPEGVFDTEFCNRYEKGGEDGITMVFIASS
PSVQDKPASTDNTNVNGEDMTEIEENMLLPVSGQELPIRWLAQHGSEKPVTHVSRDEL
QALHIARDEELPAVTALAVSHKTSLLDPLEIRDLHKLVRDTDRVFPNPGNSSLGLMTA
FFEAYMDADYTDRGLLTKEWMKGNRVSRITRTASGANAGGGNLTDRGEGFVHDLTSLA
RDVATGVLARSMDVDIYNLHPAHAKRVEEIIAENKPPFSVFRDKFITMPGGMDYSRAI
VVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEE
GKQDDEEKTQPSGAMADEQATAETMEPDATEHHQNTQPLDAQSQVNSVDEKYQELRAE
LHEARKNIPPKNPVDADKLLAALR"
misc_feature complement(<1415040..1416461)
/locus_tag="SF1375"
/note="exodeoxyribonuclease VIII; Region: PRK09709"
/db_xref="CDD:236615"
gene complement(1416561..1416836)
/locus_tag="SF1376"
/db_xref="GeneID:1024424"
CDS complement(1416561..1416836)
/locus_tag="SF1376"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707272.2"
/db_xref="GeneID:1024424"
/translation="MITSYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDI
DGPSGNVKTLNDGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI"
misc_feature complement(1416564..1416836)
/locus_tag="SF1376"
/note="hypothetical protein; Reviewed; Region: PRK09790"
/db_xref="CDD:182076"
gene complement(1417081..1417302)
/gene="kil"
/locus_tag="SF1377"
/db_xref="GeneID:1023370"
CDS complement(1417081..1417302)
/gene="kil"
/locus_tag="SF1377"
/codon_start=1
/transl_table=11
/product="FtsZ inhibitor protein"
/protein_id="NP_707273.1"
/db_xref="GeneID:1023370"
/translation="MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIR
SLTTKTCISDCMIKVFLGRDGLPVKAESW"
misc_feature complement(1417084..1417302)
/gene="kil"
/locus_tag="SF1377"
/note="FtsZ inhibitor protein; Reviewed; Region: kil;
PRK11354"
/db_xref="CDD:236900"
mobile_element complement(1417368..1418698)
/mobile_element_type="insertion sequence:IS2"
gene complement(1417379..1418284)
/locus_tag="SF1378"
/db_xref="GeneID:1024420"
CDS complement(1417379..1418284)
/locus_tag="SF1378"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707274.1"
/db_xref="GeneID:1024420"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(1417382..1418284)
/locus_tag="SF1378"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(1418242..1418652)
/locus_tag="SF1379"
/db_xref="GeneID:1026350"
CDS complement(1418242..1418652)
/locus_tag="SF1379"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707275.1"
/db_xref="GeneID:1026350"
/translation="MIVLIPVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(1418245..1418607)
/locus_tag="SF1379"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene complement(1418649..1418905)
/locus_tag="SF1380"
/pseudogene="unknown"
/db_xref="GeneID:1024431"
mobile_element complement(1420679..1421142)
/note="partial"
/mobile_element_type="insertion sequence:ISSfl4"
gene 1421321..1421884
/locus_tag="SF1382"
/db_xref="GeneID:1024415"
CDS 1421321..1421884
/locus_tag="SF1382"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707278.1"
/db_xref="GeneID:1024415"
/translation="MEIKKIINPRYTESGAVDCDVFFDDRDQAVPYTATADDVAPTGQ
QIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRAEQEAKPLTFEWNGRIWNA
GPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDE
IYRRQREMKEELSGLDDLASIRAFDVE"
misc_feature 1421546..1421869
/locus_tag="SF1382"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
gene complement(1422064..1423779)
/gene="ipaH_3"
/locus_tag="SF1383"
/db_xref="GeneID:1024395"
CDS complement(1422064..1423779)
/gene="ipaH_3"
/locus_tag="SF1383"
/codon_start=1
/transl_table=11
/product="invasion plasmid antigen"
/protein_id="NP_707279.1"
/db_xref="GeneID:1024395"
/translation="MSIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGE
NRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLPELPASL
EYLDACDNRLSTLPELPASLKHLDVDNNQLTMLPELPALLEYINADNNQLTMLPELPT
SLEVLSVRNNQLTFLPELPESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENR
ITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTL
HRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQ
VAAWLEKLSTSAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDT
GALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRF
YGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEM
LENEYSQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQVTDEVLALRLSENGS
QLHHS"
misc_feature complement(1422109..1423698)
/gene="ipaH_3"
/locus_tag="SF1383"
/note="type III secretion system effector E3 ubiquitin
transferase SlrP; Region: PRK15370"
/db_xref="CDD:185268"
misc_feature complement(1423537..1423593)
/gene="ipaH_3"
/locus_tag="SF1383"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature complement(1423360..1423416)
/gene="ipaH_3"
/locus_tag="SF1383"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature complement(1423297..1423356)
/gene="ipaH_3"
/locus_tag="SF1383"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature complement(1423138..1423236)
/gene="ipaH_3"
/locus_tag="SF1383"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature complement(1423027..1423083)
/gene="ipaH_3"
/locus_tag="SF1383"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
mobile_element 1424266..1425033
/mobile_element_type="insertion sequence:IS1"
gene 1424623..1425018
/gene="insB"
/locus_tag="SF1385"
/db_xref="GeneID:1024438"
CDS 1424623..1425018
/gene="insB"
/locus_tag="SF1385"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707281.1"
/db_xref="GeneID:1024438"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1424626..1425015
/gene="insB"
/locus_tag="SF1385"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 1425295..1427221
/gene="pphA"
/locus_tag="SF1386"
/pseudo
/db_xref="GeneID:1024392"
misc_feature 1425295..1427221
/gene="pphA"
/locus_tag="SF1386"
/note="'Similar to Escherichia coli K12 protein
phosphatase 1 modulates phosphoproteins, signals protein
misfolding gi: 1788143 (220 aa). BLAST with identity of
99% in 642 aa. This CDS has been disrupted by insertion.
The sequence has been checked and is believed to be
correct.'"
/pseudo
mobile_element 1425745..1427008
/mobile_element_type="insertion sequence:IS600"
gene 1426147..1426965
/locus_tag="SF1387"
/db_xref="GeneID:1024441"
CDS 1426147..1426965
/locus_tag="SF1387"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707282.1"
/db_xref="GeneID:1024441"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHYSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1426147..1426938
/locus_tag="SF1387"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1427222..1427497)
/locus_tag="SF1388"
/db_xref="GeneID:1024419"
CDS complement(1427222..1427497)
/locus_tag="SF1388"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707283.1"
/db_xref="GeneID:1024419"
/translation="MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCE
DIVVDVYNTEQQCLYSMSDQRIRHGSCFPIEDFIDGFWQPAQEYGDF"
misc_feature complement(1427243..1427413)
/locus_tag="SF1388"
/note="Protein of unknown function (DUF1482); Region:
DUF1482; pfam07358"
/db_xref="CDD:369331"
gene complement(1427518..1427754)
/locus_tag="SF1389"
/db_xref="GeneID:1024483"
CDS complement(1427518..1427754)
/locus_tag="SF1389"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707284.2"
/db_xref="GeneID:1024483"
/translation="MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAW
DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
misc_feature complement(1427524..1427751)
/locus_tag="SF1389"
/note="Protein of unknown function (DUF1480); Region:
DUF1480; pfam07351"
/db_xref="CDD:429421"
gene complement(1428046..1429266)
/gene="yebU"
/locus_tag="SF1390"
/db_xref="GeneID:1024637"
CDS complement(1428046..1429266)
/gene="yebU"
/locus_tag="SF1390"
/note="Code: J; COG: COG0144"
/codon_start=1
/transl_table=11
/product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
RsmF"
/protein_id="NP_707285.3"
/db_xref="GeneID:1024637"
/translation="MREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAP
YGWTLTPIPWCEEGFWIERDNEDALPLGSTTEHLSGLFYIQEASSMLPVAALFADGNA
PQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASWVKVLHANISRCGISNVALTHF
GGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAF
HALRPGGTLVYSTCTLNREENEAVCRWLKETYPDEVEFLPLGDLFPGANKALTEEGFL
HVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAAASVGL
NWDGNLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIAHAS
PDNVNAFELTPQEA"
misc_feature complement(1428049..1429266)
/gene="yebU"
/locus_tag="SF1390"
/note="rRNA (cytosine-C(5)-)-methyltransferase RsmF;
Reviewed; Region: yebU; PRK11933"
/db_xref="CDD:183387"
gene complement(1429391..1432017)
/locus_tag="SF1391"
/pseudo
/db_xref="GeneID:1024616"
misc_feature complement(1429391..1432017)
/locus_tag="SF1391"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788138 (880 aa). BLAST with
identity of 97% in 875 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(1431980..1433263)
/locus_tag="SF1392"
/db_xref="GeneID:1024417"
CDS complement(1431980..1433263)
/locus_tag="SF1392"
/note="Code: S; COG: COG2995"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707286.1"
/db_xref="GeneID:1024417"
/translation="MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEIN
SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
MQGIWQMTKQGDAITGSMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
PQRPATRRDEKLRVCLGCHFTGYPDQRGLCPRCHIPLRLRRRHSLQKCWAALLASIVL
LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
LLLSIHFKCQQGLRTRILLLRMVTWIGRWSILDLFVISLTMSLINRDQILAFTMGPAA
FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
misc_feature complement(1432013..1433218)
/locus_tag="SF1392"
/note="integral membrane protein, PqiA family; Region:
pqiA_fam; TIGR00155"
/db_xref="CDD:272933"
gene 1433393..1433890
/locus_tag="SF1393"
/db_xref="GeneID:1024607"
CDS 1433393..1433890
/locus_tag="SF1393"
/note="Code: T; COG: COG1956"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707287.1"
/db_xref="GeneID:1024607"
/translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
ASNSEIVLPLVVKNQIIGVLDIDSTVFARFTDEDEQGLRQLVAQLEKVLATTDYKKFF
ASVAG"
misc_feature 1433393..1433851
/locus_tag="SF1393"
/note="GAF domain-containing protein, putative
methionine-R-sulfoxide reductase [Defense mechanisms,
Signal transduction mechanisms]; Region: MsrC; COG1956"
/db_xref="CDD:441559"
gene 1433987..1434685
/gene="yebJ"
/locus_tag="SF1394"
/db_xref="GeneID:1024553"
CDS 1433987..1434685
/gene="yebJ"
/locus_tag="SF1394"
/experiment="mass spectrum study"
/note="Code: T; COG: COG3109"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707288.3"
/db_xref="GeneID:1024553"
/translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
SGMSLIVRAEHLVF"
misc_feature 1433987..1434682
/gene="yebJ"
/locus_tag="SF1394"
/note="ProP expression regulator; Provisional; Region:
PRK04950"
/db_xref="CDD:235322"
gene 1434711..1436753
/gene="prc"
/locus_tag="SF1395"
/db_xref="GeneID:1024381"
CDS 1434711..1436753
/gene="prc"
/locus_tag="SF1395"
/note="Code: M; COG: COG0793"
/codon_start=1
/transl_table=11
/product="carboxy-terminal protease"
/protein_id="NP_707289.4"
/db_xref="GeneID:1024381"
/translation="MFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSE
RVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGDEL
RSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAEL
NAQWDSKVKFDELSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAR
EIDPHTNYLSRRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISV
GAKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRE
RIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRS
NGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSAS
ASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQK
FYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTAFE
PELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRLAR
LNERFKREGKPELKKLDDLSKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK"
misc_feature 1434714..1436726
/gene="prc"
/locus_tag="SF1395"
/note="carboxy terminal-processing peptidase; Region:
PRK11186"
/db_xref="CDD:236873"
gene 1436948..1437826
/gene="htpX"
/locus_tag="SF1396"
/db_xref="GeneID:1024421"
CDS 1436948..1437826
/gene="htpX"
/locus_tag="SF1396"
/note="Code: O; COG: COG0501"
/codon_start=1
/transl_table=11
/product="heat shock protein HtpX"
/protein_id="NP_707290.2"
/db_xref="GeneID:1024421"
/translation="MRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGFG
GSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAPD
INAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVNT
FVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFSR
HREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTHP
PLDKRIEALRTGEYLK"
misc_feature 1436948..1437814
/gene="htpX"
/locus_tag="SF1396"
/note="protease HtpX; Region: PRK05457"
/db_xref="CDD:235478"
gene complement(1437872..1439356)
/locus_tag="SF1397"
/db_xref="GeneID:1024613"
CDS complement(1437872..1439356)
/locus_tag="SF1397"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707291.1"
/db_xref="GeneID:1024613"
/translation="MVAIHLLPVSYNSATSTVNISARIIPLLIIHQRYKIPMPKVQAD
GLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIV
ISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMS
VNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGI
IALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLLITALSGFAQGQSLTLIAAELV
VMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCAQMLAMVSLPFYLQT
VLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMATGLFSLVLLP
ASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGA
ALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRITQPRARA"
misc_feature complement(1437893..1439185)
/locus_tag="SF1397"
/note="Methylenomycin A resistance protein (also called
MMR peptide) and similar multidrug resistance (MDR)
transporters of the Major Facilitator Superfamily; Region:
MFS_MMR_MDR_like; cd17321"
/db_xref="CDD:340879"
misc_feature complement(order(1438019..1438021,1438028..1438033,
1438040..1438045,1438052..1438054,1438100..1438102,
1438112..1438114,1438124..1438129,1438283..1438285,
1438295..1438297,1438379..1438381,1438388..1438396,
1438403..1438408,1438415..1438417,1438787..1438789,
1438796..1438801,1438808..1438810,1438868..1438870,
1438877..1438885,1438889..1438894,1439042..1439044,
1439138..1439140,1439147..1439152,1439159..1439164))
/locus_tag="SF1397"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340879"
gene 1439422..1440213
/locus_tag="SF1398"
/db_xref="GeneID:1024615"
CDS 1439422..1440213
/locus_tag="SF1398"
/note="Code: K; COG: COG1414"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator KdgR"
/protein_id="NP_707292.1"
/db_xref="GeneID:1024615"
/translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
KSTVYRFLQTMKTLGYVAQEGVSEKYSLTLKLVELGARALQNVDLIRSADIQMREISR
LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLQCIAVPVFDRFG
VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
misc_feature 1439431..1440201
/locus_tag="SF1398"
/note="DNA-binding transcriptional regulator KdgR;
Provisional; Region: PRK15090"
/db_xref="CDD:185046"
gene complement(1440356..1440595)
/locus_tag="SF1399"
/db_xref="GeneID:1024555"
CDS complement(1440356..1440595)
/locus_tag="SF1399"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707293.1"
/db_xref="GeneID:1024555"
/translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLT
ARGTSTVQYLHTKSGFLEITDCPLLRKSNIVVDNG"
misc_feature complement(1440383..1440592)
/locus_tag="SF1399"
/note="YobH-like protein; Region: YobH; pfam13996"
/db_xref="CDD:433635"
gene 1440754..1440897
/locus_tag="SF1400"
/db_xref="GeneID:1024614"
CDS 1440754..1440897
/locus_tag="SF1400"
/codon_start=1
/transl_table=11
/product="PhoPQ regulatory protein"
/protein_id="NP_707294.1"
/db_xref="GeneID:1024614"
/translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
IPW"
misc_feature 1440754..1440894
/locus_tag="SF1400"
/note="PhoP/PhoQ regulator MgrB; Region: PRK10299"
/db_xref="CDD:182364"
gene 1440972..1441259
/locus_tag="SF1401"
/db_xref="GeneID:1024604"
CDS 1440972..1441259
/locus_tag="SF1401"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707295.1"
/db_xref="GeneID:1024604"
/translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
LLEALLDQQKRQNALLRRLCEANEPEKADKKTIESQKSVDDEDIIRLVAER"
misc_feature 1441041..1441256
/locus_tag="SF1401"
/note="YebO-like protein; Region: YebO; pfam13974"
/db_xref="CDD:433617"
gene 1441929..1442072
/locus_tag="SF1402"
/db_xref="GeneID:1027798"
CDS 1441929..1442072
/locus_tag="SF1402"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707296.1"
/db_xref="GeneID:1027798"
/translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
KTI"
misc_feature 1441929..1442042
/locus_tag="SF1402"
/note="Protein of unknown function (DUF2627); Region:
DUF2527; pfam10736"
/db_xref="CDD:119256"
gene 1442085..1442294
/gene="cspC"
/locus_tag="SF1403"
/db_xref="GeneID:1024611"
CDS 1442085..1442294
/gene="cspC"
/locus_tag="SF1403"
/note="Code: K; COG: COG1278"
/codon_start=1
/transl_table=11
/product="cold shock-like protein CspC"
/protein_id="NP_707297.1"
/db_xref="GeneID:1024611"
/translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGLKTL
AEGQNVEFEIQDGQKGPAAVNVTAI"
misc_feature 1442085..1442291
/gene="cspC"
/locus_tag="SF1403"
/note="cold shock-like protein CspC; Provisional; Region:
PRK10943"
/db_xref="CDD:170841"
misc_feature order(1442112..1442114,1442139..1442141,1442172..1442174,
1442259..1442261)
/gene="cspC"
/locus_tag="SF1403"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:239905"
misc_feature order(1442130..1442150,1442169..1442180)
/gene="cspC"
/locus_tag="SF1403"
/note="RNA-binding motif [active]"
/db_xref="CDD:239905"
gene 1442460..1443269
/gene="rrmA"
/locus_tag="SF1404"
/db_xref="GeneID:1023369"
CDS 1442460..1443269
/gene="rrmA"
/locus_tag="SF1404"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="23S rRNA (guanine(745)-N(1))-methyltransferase"
/protein_id="NP_707298.1"
/db_xref="GeneID:1023369"
/translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDEKATAVLDIGCGEGYYTHA
FADALPEITTFGLDVSKVAIKAAAKRYPQVTLCVASSHRLPFSDTSMDAIIRIYAPCK
AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY
PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
misc_feature 1442460..1443266
/gene="rrmA"
/locus_tag="SF1404"
/note="23S rRNA methyltransferase A; Provisional; Region:
rrmA; PRK11088"
/db_xref="CDD:236841"
misc_feature order(1442733..1442753,1442805..1442810,1442868..1442876,
1442922..1442924)
/gene="rrmA"
/locus_tag="SF1404"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(1443266..1443833)
/locus_tag="SF1405"
/pseudogene="unknown"
/db_xref="GeneID:1026363"
mobile_element complement(1444281..1445048)
/mobile_element_type="insertion sequence:IS1"
gene complement(1444296..1444691)
/gene="insB"
/locus_tag="SF1406"
/db_xref="GeneID:1024609"
CDS complement(1444296..1444691)
/gene="insB"
/locus_tag="SF1406"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707300.1"
/db_xref="GeneID:1024609"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKEKLHVISKRYTQRIERHNLNLRQHLAR
LGRMSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1444299..1444688)
/gene="insB"
/locus_tag="SF1406"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1444718..1444993)
/gene="insA"
/locus_tag="SF1407"
/db_xref="GeneID:1024593"
CDS complement(1444718..1444993)
/gene="insA"
/locus_tag="SF1407"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707301.1"
/db_xref="GeneID:1024593"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1444721..1444972)
/gene="insA"
/locus_tag="SF1407"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(1445022..1445498)
/locus_tag="SF1408"
/db_xref="GeneID:1024400"
CDS complement(1445022..1445498)
/locus_tag="SF1408"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707302.1"
/db_xref="GeneID:1024400"
/translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR
IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRIPKIIFKQKGFFFA
NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSGNAANLLI"
misc_feature complement(1445052..1445492)
/locus_tag="SF1408"
/note="Uncharacterized membrane protein YobD, UPF0266
family [Function unknown]; Region: YobD; COG4811"
/db_xref="CDD:443839"
gene complement(1445553..1446413)
/gene="manZ"
/locus_tag="SF1409"
/db_xref="GeneID:1024411"
CDS complement(1445553..1446413)
/gene="manZ"
/locus_tag="SF1409"
/codon_start=1
/transl_table=11
/product="PTS system mannose-specific transporter subunit
IID"
/protein_id="NP_707303.1"
/db_xref="GeneID:1024411"
/translation="MSEMVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALG
FCFSMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEI
DDGAINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLV
RLATRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLV
VSTITGQDGQTRVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGI
AGYACGLLGL"
misc_feature complement(1445559..1446404)
/gene="manZ"
/locus_tag="SF1409"
/note="PTS mannose transporter subunit IID; Region:
PRK11103"
/db_xref="CDD:182965"
gene complement(1446417..1447217)
/gene="manY"
/locus_tag="SF1410"
/db_xref="GeneID:1024603"
CDS complement(1446417..1447217)
/gene="manY"
/locus_tag="SF1410"
/codon_start=1
/transl_table=11
/product="PTS system mannose-specific transporter subunit
IIC"
/protein_id="NP_707304.1"
/db_xref="GeneID:1024603"
/translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
misc_feature complement(1446429..1447217)
/gene="manY"
/locus_tag="SF1410"
/note="mannose/fructose/sorbose family PTS transporter
subunit IIC; Region: PRK15065"
/db_xref="CDD:237895"
gene complement(1447280..1448251)
/gene="manX"
/locus_tag="SF1411"
/db_xref="GeneID:1024605"
CDS complement(1447280..1448251)
/gene="manX"
/locus_tag="SF1411"
/codon_start=1
/transl_table=11
/product="PTS system mannose-specific transporter subunits
IIAB"
/protein_id="NP_707305.1"
/db_xref="GeneID:1024605"
/translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
misc_feature complement(1447289..1448251)
/gene="manX"
/locus_tag="SF1411"
/note="PTS system mannose-specific transporter subunits
IIAB; Provisional; Region: PRK15088"
/db_xref="CDD:185045"
gene 1448714..1450264
/gene="yoaE"
/locus_tag="SF1412"
/db_xref="GeneID:1024610"
CDS 1448714..1450264
/gene="yoaE"
/locus_tag="SF1412"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707306.1"
/db_xref="GeneID:1024610"
/translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPIPE
GAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPV
CRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS
FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGNGWLVKGGTDLHALQQA
LDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIFEANDYRVDLVRIVKE
QPAHDEDE"
misc_feature 1448714..1449385
/gene="yoaE"
/locus_tag="SF1412"
/note="Tellurite resistance membrane protein TerC
[Inorganic ion transport and metabolism]; Region: TerC;
COG0861"
/db_xref="CDD:440622"
misc_feature 1449146..1450258
/gene="yoaE"
/locus_tag="SF1412"
/note="Hemolysin-related protein, contains CBS domains,
UPF0053 family [General function prediction only]; Region:
TlyC; COG1253"
/db_xref="CDD:440865"
gene complement(1450268..1451866)
/locus_tag="SF1413"
/db_xref="GeneID:1024612"
CDS complement(1450268..1451866)
/locus_tag="SF1413"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707307.2"
/db_xref="GeneID:1024612"
/translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
RVVQFANHAVEELDKVLLPLQAGSKVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV
QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
AGVIEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
SQSFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLG
LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTH
YVMAETIRQHHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITE
RDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD
AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFP
KWLAGSQPPPARHNGHITPIMSLR"
misc_feature complement(1450301..1451842)
/locus_tag="SF1413"
/note="Redox-sensing c-di-GMP phosphodiesterase, contains
CSS-motif and EAL domains [Signal transduction
mechanisms]; Region: YjcC; COG4943"
/db_xref="CDD:443970"
gene complement(1451997..1453361)
/gene="sdaA"
/locus_tag="SF1414"
/db_xref="GeneID:1024608"
CDS complement(1451997..1453361)
/gene="sdaA"
/locus_tag="SF1414"
/note="Code: E; COG: COG1760"
/codon_start=1
/transl_table=11
/product="L-serine deaminase"
/protein_id="NP_707308.1"
/db_xref="GeneID:1024608"
/translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR
VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVKERERLLLAQGR
HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
VQCD"
misc_feature complement(1452000..1453361)
/gene="sdaA"
/locus_tag="SF1414"
/note="L-serine deaminase; Provisional; Region: PRK15023"
/db_xref="CDD:184984"
gene complement(1453545..1454123)
/gene="yeaB"
/locus_tag="SF1415"
/db_xref="GeneID:1024602"
CDS complement(1453545..1454123)
/gene="yeaB"
/locus_tag="SF1415"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="NUDIX hydrolase"
/protein_id="NP_707309.1"
/db_xref="GeneID:1024602"
/translation="MEYRSLTLDDFLSRFQLLRPQINREPLNHRQAAVLIPIVRRPQP
GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLP
PVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEQYFVWGMTAGIIRELALQIGVTP"
misc_feature complement(1453554..1454123)
/gene="yeaB"
/locus_tag="SF1415"
/note="putative NUDIX hydrolase; Provisional; Region:
PRK10707"
/db_xref="CDD:182663"
gene complement(1454127..1455488)
/gene="pabB"
/locus_tag="SF1416"
/db_xref="GeneID:1024598"
CDS complement(1454127..1455488)
/gene="pabB"
/locus_tag="SF1416"
/note="Code: EH; COG: COG0147"
/codon_start=1
/transl_table=11
/product="aminodeoxychorismate synthase subunit I"
/protein_id="NP_707310.1"
/db_xref="GeneID:1024598"
/translation="MKTLSPTVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
RFDIVVADPICTLTTLGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
NARRAWLESQQFSPQEDFTLTSDWQSNMTHEQYGEKFRQVQEYLHSGDCYQVNLAQRF
HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
PAVHHLVSTITARLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVNKILRQ
LEK"
misc_feature complement(1454130..1455488)
/gene="pabB"
/locus_tag="SF1416"
/note="aminodeoxychorismate synthase component 1; Region:
pabB; PRK15465"
/db_xref="CDD:185362"
gene 1455562..1455741
/locus_tag="SF1417"
/db_xref="GeneID:1024601"
CDS 1455562..1455741
/locus_tag="SF1417"
/note="Code: S; COG: COG3140"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707311.1"
/db_xref="GeneID:1024601"
/translation="MFAGLPSLIHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
HSGELIVARFEDEDE"
misc_feature 1455562..1455735
/locus_tag="SF1417"
/note="Uncharacterized conserved protein YoaH, UPF0181
family [Function unknown]; Region: yoaH; COG3140"
/db_xref="CDD:442374"
gene complement(1455861..1456220)
/locus_tag="SF1418"
/db_xref="GeneID:1024634"
CDS complement(1455861..1456220)
/locus_tag="SF1418"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707312.1"
/db_xref="GeneID:1024634"
/translation="MQIKVIYSLIDNMVNFKDKNMPAVIDKALDFIGAMDVSAPTPSS
MNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMETGERSVIK
NPEYFSTYMQEELKALV"
misc_feature complement(1455873..1456160)
/locus_tag="SF1418"
/note="Domain of unknown function (DUF1889); Region:
DUF1889; pfam08986"
/db_xref="CDD:462649"
gene complement(1456576..1456968)
/locus_tag="SF1419"
/db_xref="GeneID:1024606"
CDS complement(1456576..1456968)
/locus_tag="SF1419"
/note="Code: J; COG: COG0251"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707313.1"
/db_xref="GeneID:1024606"
/translation="MAVFAARKWKYNEDKMMTIVRIDAEARWSDVVIHNNTLYYTGVP
ENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVA
GHAPVRCTVQAGLMNPKYKVEIKIVAAV"
misc_feature complement(1456582..1456893)
/locus_tag="SF1419"
/note="This group of proteins belong to a large family of
YjgF/YER057c/UK114-like proteins present in bacteria,
archaea, and eukaryotes with no definitive function. The
conserved domain is similar in structure to chorismate
mutase but there is no sequence...; Region:
YjgF_YER057c_UK114_like_2; cd06150"
/db_xref="CDD:100007"
misc_feature complement(order(1456588..1456590,1456594..1456596,
1456600..1456602,1456630..1456656,1456669..1456671,
1456681..1456683,1456690..1456692,1456723..1456725,
1456729..1456731,1456735..1456740,1456744..1456746,
1456843..1456848,1456852..1456854,1456858..1456860,
1456867..1456869,1456873..1456875,1456882..1456887))
/locus_tag="SF1419"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100007"
misc_feature complement(order(1456600..1456602,1456645..1456647,
1456690..1456692,1456702..1456704,1456885..1456887))
/locus_tag="SF1419"
/note="putative active site [active]"
/db_xref="CDD:100007"
gene 1457052..1458962
/locus_tag="SF1420"
/db_xref="GeneID:1024645"
CDS 1457052..1458962
/locus_tag="SF1420"
/note="Code: L; COG: COG1199"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707314.1"
/db_xref="GeneID:1024645"
/translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE
AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW
IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGSAR
QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
EVQLPDAVITLKQGVGRLIRDADDRGVLVICDYRLVMRPYGATFLASLPPAPRTRDIA
RAVRFLAIPSSR"
misc_feature 1457067..1458944
/locus_tag="SF1420"
/note="Rad3-related DNA helicase DinG [Replication,
recombination and repair]; Region: DinG; COG1199"
/db_xref="CDD:440812"
gene 1459020..1459715
/gene="yeaZ"
/locus_tag="SF1421"
/db_xref="GeneID:1024594"
CDS 1459020..1459715
/gene="yeaZ"
/locus_tag="SF1421"
/note="Code: O; COG: COG1214"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707315.1"
/db_xref="GeneID:1024594"
/translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
WRKNGATRVLSAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPELVHERMQQLSGEW
VTVGTGWQAWPDLGKESGLVLRDGEVLLPAAEDMLPIACQMFAEGKTVAVEHAEPVYL
RNNVAWKKLPGKE"
misc_feature 1459020..1459712
/gene="yeaZ"
/locus_tag="SF1421"
/note="tRNA A37 threonylcarbamoyladenosine modification
protein TsaB [Translation, ribosomal structure and
biogenesis]; Region: TsaB; COG1214"
/db_xref="CDD:440827"
gene 1459755..1460336
/locus_tag="SF1422"
/db_xref="GeneID:1024506"
CDS 1459755..1460336
/locus_tag="SF1422"
/note="Code: M; COG: COG3065"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707316.1"
/db_xref="GeneID:1024506"
/translation="MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSTTPQQDLVRV
MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE"
misc_feature 1459770..1460321
/locus_tag="SF1422"
/note="Outer membrane lipoprotein Slp family; Region: Slp;
cl01164"
/db_xref="CDD:470102"
gene 1460476..1462227
/gene="fadD"
/locus_tag="SF1423"
/db_xref="GeneID:1024599"
CDS 1460476..1462227
/gene="fadD"
/locus_tag="SF1423"
/note="Code: IQ; COG: COG0318"
/codon_start=1
/transl_table=11
/product="long-chain-fatty-acid--CoA ligase"
/protein_id="NP_707317.1"
/db_xref="GeneID:1024599"
/translation="MLTACISFGVAMTTNTHFRGEELKKVWLNRYPADVPTEINPDRY
QSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALM
MPNLLQYPVALFGILRAGIIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKV
VDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRM
QYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVV
TALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNA
LLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNP
YDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEI
IKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAV
GVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKI
LRRELRDEARGKVDNKA"
misc_feature 1460542..1462221
/gene="fadD"
/locus_tag="SF1423"
/note="long-chain-fatty-acid--CoA ligase FadD; Region:
PRK08974"
/db_xref="CDD:236359"
misc_feature order(1461172..1461174,1461181..1461198,1461202..1461207)
/gene="fadD"
/locus_tag="SF1423"
/note="acyl-activating enzyme (AAE) consensus motif; other
site"
/db_xref="CDD:341259"
misc_feature order(1461181..1461183,1461538..1461543,1461604..1461621,
1461853..1461855,1461889..1461891,1461898..1461900,
1461931..1461933,1462168..1462170)
/gene="fadD"
/locus_tag="SF1423"
/note="putative AMP binding site [chemical binding]; other
site"
/db_xref="CDD:341259"
misc_feature order(1461181..1461183,1461310..1461315,1461457..1461459,
1461463..1461468,1461475..1461477,1461538..1461543,
1461604..1461621,1461853..1461855,1461889..1461891,
1461898..1461900,1461922..1461933,1462111..1462113)
/gene="fadD"
/locus_tag="SF1423"
/note="putative active site [active]"
/db_xref="CDD:341259"
misc_feature order(1461310..1461312,1461463..1461468,1461475..1461477,
1461538..1461540,1461922..1461930,1462093..1462095,
1462111..1462113)
/gene="fadD"
/locus_tag="SF1423"
/note="putative CoA binding site [chemical binding]; other
site"
/db_xref="CDD:341259"
gene 1462309..1463424
/gene="rnd"
/locus_tag="SF1424"
/db_xref="GeneID:1024596"
CDS 1462309..1463424
/gene="rnd"
/locus_tag="SF1424"
/note="Code: J; COG: COG0349"
/codon_start=1
/transl_table=11
/product="ribonuclease D"
/protein_id="NP_707318.2"
/db_xref="GeneID:1024596"
/translation="MITTDDALASLCEAVRVFPAIALDTEFVRTRTYYPQLGLIQLFD
GEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
AAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVE
KAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
NWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
misc_feature 1462309..1463415
/gene="rnd"
/locus_tag="SF1424"
/note="ribonuclease D; Provisional; Region: PRK10829"
/db_xref="CDD:236771"
gene complement(1463478..1464443)
/gene="yeaX"
/locus_tag="SF1425"
/db_xref="GeneID:1024652"
CDS complement(1463478..1464443)
/gene="yeaX"
/locus_tag="SF1425"
/note="Code: C; COG: COG1018"
/codon_start=1
/transl_table=11
/product="diogenase subunit beta"
/protein_id="NP_707319.1"
/db_xref="GeneID:1024652"
/translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHIL
VQMSDGDNQYSNAYSLLSSPHNTSSYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTP
NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDIDWQLHYCSRNPESCAFRAELV
QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALIEAVRSEAARLDIAAD
TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
misc_feature complement(1463766..1464410)
/gene="yeaX"
/locus_tag="SF1425"
/note="Phthalate dioxygenase reductase (PDR) is an
FMN-dependent reductase that mediates electron transfer
from NADH to FMN to an iron sulfur cluster. PDR has an an
N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding
domain and a C-terminal iron-sulfur...; Region: PDR_like;
cd06185"
/db_xref="CDD:99782"
misc_feature complement(order(1463769..1463771,1464069..1464071,
1464192..1464197,1464201..1464203,1464219..1464227,
1464267..1464269,1464273..1464278))
/gene="yeaX"
/locus_tag="SF1425"
/note="FMN-binding pocket [chemical binding]; other site"
/db_xref="CDD:99782"
misc_feature complement(order(1464267..1464272,1464276..1464278))
/gene="yeaX"
/locus_tag="SF1425"
/note="flavin binding motif [active]"
/db_xref="CDD:99782"
misc_feature complement(order(1464162..1464164,1464183..1464185,
1464192..1464194,1464201..1464203))
/gene="yeaX"
/locus_tag="SF1425"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99782"
misc_feature complement(order(1464066..1464068,1464072..1464083,
1464093..1464095))
/gene="yeaX"
/locus_tag="SF1425"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99782"
misc_feature complement(order(1463847..1463852,1464000..1464008,
1464075..1464080))
/gene="yeaX"
/locus_tag="SF1425"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99782"
misc_feature complement(1463481..1463738)
/gene="yeaX"
/locus_tag="SF1425"
/note="Ferredoxin [Energy production and conversion];
Region: Fdx; COG0633"
/db_xref="CDD:440398"
gene complement(1464499..1465118)
/gene="yeaW"
/locus_tag="SF1426"
/pseudo
/db_xref="GeneID:1024625"
misc_feature complement(1464499..1465118)
/gene="yeaW"
/locus_tag="SF1426"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788103 (375 aa). BLAST with
identity of 99% in 206 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1465325..1466066)
/locus_tag="SF1427"
/pseudogene="unknown"
/db_xref="GeneID:1024654"
mobile_element 1466327..1467590
/mobile_element_type="insertion sequence:IS600"
gene 1466391..1466693
/locus_tag="SF1428"
/db_xref="GeneID:1024646"
CDS 1466391..1466693
/locus_tag="SF1428"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707321.1"
/db_xref="GeneID:1024646"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 1466391..1466663
/locus_tag="SF1428"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1466729..1467547
/locus_tag="SF1429"
/db_xref="GeneID:1024661"
CDS 1466729..1467547
/locus_tag="SF1429"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707322.1"
/db_xref="GeneID:1024661"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1466729..1467520
/locus_tag="SF1429"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1468458..1469483)
/gene="yeaP"
/locus_tag="SF1430"
/db_xref="GeneID:1024640"
CDS complement(1468458..1469483)
/gene="yeaP"
/locus_tag="SF1430"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707323.2"
/db_xref="GeneID:1024640"
/translation="MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKV
DVEARLQHIMFARNSQKMHIPENFTVLWDYSLCKRAIDENCFFSDEVPDRWGDCIAAR
NLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALV
EQLHEANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKL
INDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERI
QQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFV
AHPALHS"
misc_feature complement(1468992..1469429)
/gene="yeaP"
/locus_tag="SF1430"
/note="Domain present in phytochromes and cGMP-specific
phosphodiesterases; Region: GAF; smart00065"
/db_xref="CDD:214500"
misc_feature complement(1468497..1468964)
/gene="yeaP"
/locus_tag="SF1430"
/note="Diguanylate cyclase, GGDEF domain; Region: GGDEF;
pfam00990"
/db_xref="CDD:425976"
misc_feature complement(order(1468719..1468721,1468848..1468850))
/gene="yeaP"
/locus_tag="SF1430"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature complement(order(1468716..1468727,1468731..1468733,
1468797..1468799,1468809..1468811,1468821..1468826,
1468833..1468835))
/gene="yeaP"
/locus_tag="SF1430"
/note="active site"
/db_xref="CDD:143635"
misc_feature complement(order(1468659..1468661,1468743..1468745))
/gene="yeaP"
/locus_tag="SF1430"
/note="I-site [active]"
/db_xref="CDD:143635"
gene 1469666..1469920
/gene="yoaF"
/locus_tag="SF1431"
/db_xref="GeneID:1027799"
CDS 1469666..1469920
/gene="yoaF"
/locus_tag="SF1431"
/note="Code: S; COG: COG3042"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707324.1"
/db_xref="GeneID:1027799"
/translation="MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK
GGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
misc_feature 1469666..1469905
/gene="yoaF"
/locus_tag="SF1431"
/note="Putative hemolysin [General function prediction
only]; Region: Hlx; COG3042"
/db_xref="CDD:442276"
gene complement(1469942..1470310)
/gene="yeaO"
/locus_tag="SF1432"
/db_xref="GeneID:1024649"
CDS complement(1469942..1470310)
/gene="yeaO"
/locus_tag="SF1432"
/note="Code: S; COG: COG3189"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707325.1"
/db_xref="GeneID:1024649"
/translation="MKGRTNTMNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLAL
DEWDKEITPSTELRKAFHGEVVDFATFREQYRAELAQHEQEGKRLADIAKKQPLTLLY
AAKNTTQNHALVLADWLRSL"
misc_feature complement(1469945..1470289)
/gene="yeaO"
/locus_tag="SF1432"
/note="Uncharacterized conserved protein YeaO, DUF488
family [Function unknown]; Region: YeaO; COG3189"
/db_xref="CDD:442422"
gene complement(1470463..1471524)
/gene="yeaN"
/locus_tag="SF1433"
/db_xref="GeneID:1024671"
CDS complement(1470463..1471524)
/gene="yeaN"
/locus_tag="SF1433"
/note="Code: P; COG: COG2807"
/codon_start=1
/transl_table=11
/product="amino acid/amine transport protein"
/protein_id="NP_707326.1"
/db_xref="GeneID:1024671"
/translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA
LNGFGWQGALFMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
FLGINSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIALFLHHVKDQ
RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRQVLRIRRR
HSRGWHNPSGICWQPVGRR"
misc_feature complement(1470547..1471479)
/gene="yeaN"
/locus_tag="SF1433"
/note="Major Facilitator Superfamily; Region: MFS;
cl28910"
/db_xref="CDD:475125"
misc_feature complement(order(1470565..1470567,1470577..1470579,
1470589..1470594,1470736..1470738,1470748..1470750,
1470829..1470831,1470838..1470846,1470853..1470858,
1470865..1470867,1471078..1471080,1471087..1471092,
1471099..1471101,1471156..1471158,1471165..1471173,
1471177..1471182,1471327..1471329,1471423..1471425,
1471432..1471437,1471444..1471449))
/gene="yeaN"
/locus_tag="SF1433"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:349949"
gene 1471621..1472439
/gene="yeaM"
/locus_tag="SF1434"
/pseudo
/db_xref="GeneID:1024621"
misc_feature 1471621..1472439
/gene="yeaM"
/locus_tag="SF1434"
/note="Similar to Escherichia coli K12 ARAC-type
regulatory protein gi: 1788091 (274 aa). BLAST with
identity of 98% in 273 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1472396..1472842)
/gene="yeaL"
/locus_tag="SF1435"
/db_xref="GeneID:1023392"
CDS complement(1472396..1472842)
/gene="yeaL"
/locus_tag="SF1435"
/note="Code: S; COG: COG2707"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707327.1"
/db_xref="GeneID:1023392"
/translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
misc_feature complement(1472402..1472794)
/gene="yeaL"
/locus_tag="SF1435"
/note="Uncharacterized membrane protein, DUF441 family
[Function unknown]; Region: YeaL; COG2707"
/db_xref="CDD:442026"
gene 1472964..1473116
/locus_tag="SF1436"
/db_xref="GeneID:1026370"
CDS 1472964..1473116
/locus_tag="SF1436"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707328.1"
/db_xref="GeneID:1026370"
/translation="MHANNNVKTAISRGHAMNDQMFVETLIITSSFFAIAVVLVLSVL
LIERIG"
misc_feature 1473012..1473113
/locus_tag="SF1436"
/note="small membrane protein YoaI; Region: membrane_YoaI;
NF041475"
/db_xref="CDD:469363"
gene complement(1473117..1473620)
/gene="yeaK"
/locus_tag="SF1437"
/db_xref="GeneID:1024644"
CDS complement(1473117..1473620)
/gene="yeaK"
/locus_tag="SF1437"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707329.1"
/db_xref="GeneID:1024644"
/translation="MTEMAKGSVTHQQLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPEL
VNFRRTA"
misc_feature complement(1473129..1473590)
/gene="yeaK"
/locus_tag="SF1437"
/note="YeaK is an uncharacterized Echerichia coli protein
with a YbaK-like domain of unknown function. The YbaK-like
domain family includes the INS amino acid-editing domain
of the bacterial class II prolyl tRNA synthetase (ProRS),
and it's trans-acting...; Region: YeaK; cd04336"
/db_xref="CDD:239828"
misc_feature complement(order(1473210..1473212,1473294..1473299,
1473465..1473467))
/gene="yeaK"
/locus_tag="SF1437"
/note="putative deacylase active site [active]"
/db_xref="CDD:239828"
gene complement(1473663..1474740)
/gene="yeaJ"
/locus_tag="SF1438"
/pseudo
/db_xref="GeneID:1024642"
misc_feature complement(1473663..1474740)
/gene="yeaJ"
/locus_tag="SF1438"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788086 (557 aa). BLAST with
identity of 99% in 359 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element 1474741..1476004
/mobile_element_type="insertion sequence:IS600"
gene 1474805..1475107
/locus_tag="SF1439"
/db_xref="GeneID:1024627"
CDS 1474805..1475107
/locus_tag="SF1439"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707330.1"
/db_xref="GeneID:1024627"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATVYFAQESLKNTR"
misc_feature 1474805..1475077
/locus_tag="SF1439"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1475143..1475961
/locus_tag="SF1440"
/db_xref="GeneID:1024631"
CDS 1475143..1475961
/locus_tag="SF1440"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707331.1"
/db_xref="GeneID:1024631"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHYSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1475143..1475934
/locus_tag="SF1440"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 1476368..1477114
/gene="yeaF"
/locus_tag="SF1441"
/db_xref="GeneID:1024630"
CDS 1476368..1477114
/gene="yeaF"
/locus_tag="SF1441"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707332.1"
/db_xref="GeneID:1024630"
/translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
misc_feature 1476377..1477111
/gene="yeaF"
/locus_tag="SF1441"
/note="Outer membrane scaffolding protein for murein
synthesis, MipA/OmpV family [Cell wall/membrane/envelope
biogenesis]; Region: OmpV; COG3713"
/db_xref="CDD:442927"
gene 1477204..1477965
/locus_tag="SF1442"
/db_xref="GeneID:1024643"
CDS 1477204..1477965
/locus_tag="SF1442"
/note="Code: R; COG: COG0656"
/codon_start=1
/transl_table=11
/product="aldehyde reductase"
/protein_id="NP_707333.1"
/db_xref="GeneID:1024643"
/translation="MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIEL
GLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRL
NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLGYADMQELWQLPGGNQ
CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHV
QQHAAALEVELSSAELAMLDKAYPVPKGKTALDMV"
misc_feature 1477213..1477917
/locus_tag="SF1442"
/note="Escherichia coli YeaE and similar proteins; Region:
AKR_YeaE; cd19138"
/db_xref="CDD:381364"
misc_feature order(1477351..1477353,1477366..1477368,1477441..1477443,
1477540..1477542)
/locus_tag="SF1442"
/note="catalytic tetrad [active]"
/db_xref="CDD:381364"
gene complement(1478016..1478900)
/gene="yeaD"
/locus_tag="SF1443"
/db_xref="GeneID:1024655"
CDS complement(1478016..1478900)
/gene="yeaD"
/locus_tag="SF1443"
/note="Code: G; COG: COG0676"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707334.2"
/db_xref="GeneID:1024655"
/translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
WTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETT
SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
VINDEALNRIIAVGHQHHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVETAYASETQK
VTKEKPAHLAQSIRVAKR"
misc_feature complement(1478022..1478900)
/gene="yeaD"
/locus_tag="SF1443"
/note="D-hexose-6-phosphate mutarotase [Carbohydrate
transport and metabolism]; Region: YeaD; COG0676"
/db_xref="CDD:440440"
gene complement(1478984..1479979)
/gene="gapA"
/locus_tag="SF1444"
/db_xref="GeneID:1024650"
CDS complement(1478984..1479979)
/gene="gapA"
/locus_tag="SF1444"
/note="Code: G; COG: COG0057"
/codon_start=1
/transl_table=11
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="NP_707335.2"
/db_xref="GeneID:1024650"
/translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
misc_feature complement(1478987..1479979)
/gene="gapA"
/locus_tag="SF1444"
/note="glyceraldehyde-3-phosphate dehydrogenase; Region:
gapA; PRK15425"
/db_xref="CDD:185323"
gene 1480321..1480734
/gene="yeaA"
/locus_tag="SF1445"
/db_xref="GeneID:1024628"
CDS 1480321..1480734
/gene="yeaA"
/locus_tag="SF1445"
/note="Code: O; COG: COG0229"
/codon_start=1
/transl_table=11
/product="methionine sulfoxide reductase B"
/protein_id="NP_707336.1"
/db_xref="GeneID:1024628"
/translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
HCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING"
misc_feature 1480330..1480731
/gene="yeaA"
/locus_tag="SF1445"
/note="methionine-R-sulfoxide reductase; Region:
TIGR00357"
/db_xref="CDD:129454"
gene 1480776..1481048
/locus_tag="SF1446"
/db_xref="GeneID:1024620"
CDS 1480776..1481048
/locus_tag="SF1446"
/note="Code: S; COG: COG3139"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707337.2"
/db_xref="GeneID:1024620"
/translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
misc_feature 1480776..1481045
/locus_tag="SF1446"
/note="Uncharacterized conserved protein YeaC, DUF1315
family [Function unknown]; Region: yeaC; COG3139"
/db_xref="CDD:442373"
gene 1481418..1482494
/locus_tag="SF1447"
/db_xref="GeneID:1024665"
CDS 1481418..1482494
/locus_tag="SF1447"
/note="Code: ER; COG: COG1063"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707338.1"
/db_xref="GeneID:1024665"
/translation="MKALARFGKAFGGYKMIHVPQPICGPEDVVTEIKAAAICGADMK
HYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGD
FLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPIC
NAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVA
KELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRV
GMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQ
WREGFDAMVDKTAIKVIMTYDFDE"
misc_feature 1481418..1482371
/locus_tag="SF1447"
/note="Alcohol dehydrogenases of the MDR family; Region:
Zn_ADH4; cd08258"
/db_xref="CDD:176219"
misc_feature order(1481532..1481540,1481547..1481549,1481886..1481888,
1481898..1481900,1481961..1481978,1482033..1482038,
1482057..1482059,1482126..1482128,1482174..1482179,
1482183..1482185,1482243..1482248,1482315..1482323)
/locus_tag="SF1447"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176219"
misc_feature order(1481532..1481534,1481598..1481603,1481886..1481888)
/locus_tag="SF1447"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176219"
misc_feature order(1481691..1481693,1481700..1481702,1481709..1481711,
1481733..1481735)
/locus_tag="SF1447"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176219"
gene 1482521..1483900
/locus_tag="SF1448"
/db_xref="GeneID:1024629"
CDS 1482521..1483900
/locus_tag="SF1448"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707339.2"
/db_xref="GeneID:1024629"
/translation="MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGL
ILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASM
VVGAFSPNMDFLIACRFVMDVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSY
PLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEA
EKVMRSIEEGVIRQTGKPLPPVVIADDGKAPQAVPYSALLTGVLLKRVILGSCVLITM
NVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAMLVMDKIPRKTMGVG
LLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSG
LANAVGRISGIAAPYAVAVLLSSYGVTGVFILLGAVSNIVAIAIATIGIETKGVSVES
LSIDAVANK"
misc_feature 1482593..1483831
/locus_tag="SF1448"
/note="Metazoan Synaptic vesicle glycoprotein 2 (SV2) and
related small molecule transporters of the Major
Facilitator Superfamily; Region: MFS_SV2_like; cd17316"
/db_xref="CDD:340874"
misc_feature order(1482623..1482628,1482635..1482640,1482647..1482649,
1482743..1482745,1482893..1482898,1482902..1482910,
1482917..1482919,1482977..1482979,1482986..1482991,
1482998..1483000,1483337..1483339,1483346..1483351,
1483358..1483366,1483373..1483375,1483454..1483456,
1483466..1483468,1483616..1483621,1483631..1483633,
1483643..1483645,1483691..1483693,1483700..1483705,
1483712..1483717,1483724..1483726)
/locus_tag="SF1448"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340874"
gene 1483917..1484962
/gene="ydjJ"
/locus_tag="SF1449"
/pseudo
/db_xref="GeneID:1024666"
misc_feature 1483917..1484962
/gene="ydjJ"
/locus_tag="SF1449"
/note="Similar to Escherichia coli K12 oxidoreductase gi:
1788073 (348 aa). BLAST with identity of 99% in 349 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 1484983..1485819
/locus_tag="SF1450"
/db_xref="GeneID:1024622"
CDS 1484983..1485819
/locus_tag="SF1450"
/note="Code: G; COG: COG0191"
/codon_start=1
/transl_table=11
/product="aldolase"
/protein_id="NP_707340.1"
/db_xref="GeneID:1024622"
/translation="MLADIRYWENDATNKYYAIAHFNVWNAEMLMGVKDAAEEAKSPV
IISFSTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSIEIIHNAWTHGMNSLMR
DASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE
FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKT
AISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIELFGSDGK
AE"
misc_feature 1484983..1485813
/locus_tag="SF1450"
/note="A large family of domains similar to triose
phosphate isomerase (TIM) which, in general, share an
eight beta/alpha closed barrel structure; Region: TIM-like
beta/alpha barrel domains; cl21457"
/db_xref="CDD:473867"
misc_feature order(1485058..1485066,1485073..1485075,1485133..1485135,
1485142..1485150,1485160..1485162,1485172..1485174,
1485181..1485186,1485412..1485414,1485673..1485678,
1485682..1485687,1485694..1485696,1485706..1485708)
/locus_tag="SF1450"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:238477"
misc_feature order(1485223..1485228,1485511..1485519,1485523..1485525,
1485598..1485603,1485607..1485609,1485664..1485666,
1485670..1485675)
/locus_tag="SF1450"
/note="active site"
/db_xref="CDD:238477"
misc_feature order(1485226..1485228,1485514..1485516,1485598..1485600)
/locus_tag="SF1450"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:238477"
misc_feature order(1485511..1485513,1485517..1485519,1485523..1485525,
1485601..1485603,1485607..1485609)
/locus_tag="SF1450"
/note="Na+ binding site [ion binding]; other site"
/db_xref="CDD:238477"
gene 1485824..1486771
/locus_tag="SF1451"
/db_xref="GeneID:1024624"
CDS 1485824..1486771
/locus_tag="SF1451"
/note="Code: G; COG: COG0524"
/codon_start=1
/transl_table=11
/product="kinase"
/protein_id="NP_707341.2"
/db_xref="GeneID:1024624"
/translation="MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMSTGGDA
INEATIISRLGHRTALMSRIGKDASGQFILDHCRKENIDIQSLKQDVSIDTSINVGLV
TEDGERTFVTNRNGSLWKLNIDDVDFARFPQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEEKLLTGKETLDEIADCFLA
CGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNL
RECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG"
misc_feature 1485836..1486714
/locus_tag="SF1451"
/note="2-keto-3-deoxygluconate kinase (KdgK)
phosphorylates 2-keto-3-deoxygluconate (KDG) to form
2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the
common intermediate product, that allows organisms to
channel D-glucuronate and/or D-galacturinate into the...;
Region: KdgK; cd01166"
/db_xref="CDD:238571"
misc_feature order(1485947..1485952,1485959..1485961,1486115..1486117,
1486157..1486159,1486163..1486165,1486247..1486249,
1486340..1486342,1486592..1486594,1486601..1486603,
1486709..1486711)
/locus_tag="SF1451"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238571"
misc_feature order(1486502..1486504,1486517..1486519,1486562..1486564,
1486592..1486600,1486607..1486609,1486673..1486675,
1486685..1486687)
/locus_tag="SF1451"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238571"
gene 1486826..1487761
/locus_tag="SF1452"
/db_xref="GeneID:1024623"
CDS 1486826..1487761
/locus_tag="SF1452"
/note="Code: C; COG: COG0667"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707342.2"
/db_xref="GeneID:1024623"
/translation="MGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTALGY
NFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREE
VEASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKAEGKIRAIGAANVDADH
IREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDY
VPGGARANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSG
ATAPEQVRENVAALNINLSDADATLMREMAEALER"
misc_feature 1486826..1487737
/locus_tag="SF1452"
/note="Escherichia coli NADH-specific methylglyoxal
reductase (YdjG) and similar proteins; Region:
AKR_AKR11B2; cd19149"
/db_xref="CDD:381375"
misc_feature order(1486835..1486843,1486940..1486942,1486955..1486957,
1487033..1487035,1487285..1487290,1487345..1487347,
1487429..1487449,1487456..1487458,1487462..1487464,
1487495..1487497,1487594..1487596,1487645..1487653,
1487657..1487659,1487669..1487671)
/locus_tag="SF1452"
/note="putative active site [active]"
/db_xref="CDD:381375"
misc_feature order(1486940..1486942,1486955..1486957,1487033..1487035,
1487186..1487188)
/locus_tag="SF1452"
/note="catalytic tetrad [active]"
/db_xref="CDD:381375"
gene 1487898..1488656
/locus_tag="SF1453"
/db_xref="GeneID:1024683"
CDS 1487898..1488656
/locus_tag="SF1453"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DeoR family transcriptional regulator"
/protein_id="NP_707343.1"
/db_xref="GeneID:1024683"
/translation="MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLE
DEGFLTRTYGGAVLNTAVLTENIHFYKRASSFYEEKLLIARKALPFIDNKTTMAADSS
STVMELLKLLQDRSDLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEI
ISRYHVDIMVMSCKGLDINSGALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFV
QLADFSHINYIITDKSPGAEWIAFCKDNNIQLVW"
misc_feature 1487898..1488650
/locus_tag="SF1453"
/note="DNA-binding transcriptional regulator of sugar
metabolism, DeoR/GlpR family [Transcription, Carbohydrate
transport and metabolism]; Region: GlpR; COG1349"
/db_xref="CDD:440960"
gene 1488774..1490132
/gene="ydjE"
/locus_tag="SF1454"
/db_xref="GeneID:1024656"
CDS 1488774..1490132
/gene="ydjE"
/locus_tag="SF1454"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707344.2"
/db_xref="GeneID:1024656"
/translation="MEQYDQIGARLDRLPLARFHYRIFGIISFSLLLTGFLSYSGNVV
LAKLVSNGWSNNFLYAAFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAAT
GAAFVPDMYWLIFFRFLMGTGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPM
LSAAIGVVVIAFFSWRIMFLLGGIGILLAWFLSGKYFIESPRWLEGKGQIAGAESQLR
EVEQQIEREKSIRLPQLTLNQSNSKVKVIKGTFRLLFKGEMLRRTLVAITVLIAMNIS
LYTITVWIPTIFVNSGIDVDKSILMTAVIMIGAPVGIFIAALIIDHFPRRLFGSALLI
IIAVLGYIYSSQTTEWAILIYGLVMIFFLYMYVCFASAVYIPELWPTHLRLRGSGFVN
AVGRIVAVFTPYGVAALLTHYGSITVFMVLGVMLVLCALVLSIFGIETRKVSLEEISE
VN"
misc_feature 1488843..1490078
/gene="ydjE"
/locus_tag="SF1454"
/note="Metazoan Synaptic vesicle glycoprotein 2 (SV2) and
related small molecule transporters of the Major
Facilitator Superfamily; Region: MFS_SV2_like; cd17316"
/db_xref="CDD:340874"
misc_feature order(1488873..1488878,1488885..1488890,1488897..1488899,
1488993..1488995,1489143..1489148,1489152..1489160,
1489167..1489169,1489227..1489229,1489236..1489241,
1489248..1489250,1489581..1489583,1489590..1489595,
1489602..1489610,1489617..1489619,1489698..1489700,
1489710..1489712,1489860..1489865,1489875..1489877,
1489887..1489889,1489935..1489937,1489944..1489949,
1489956..1489961,1489968..1489970)
/gene="ydjE"
/locus_tag="SF1454"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340874"
gene complement(1490225..1490884)
/gene="ydjB"
/locus_tag="SF1455"
/db_xref="GeneID:1024674"
CDS complement(1490225..1490884)
/gene="ydjB"
/locus_tag="SF1455"
/note="Code: Q; COG: COG1335"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707345.3"
/db_xref="GeneID:1024674"
/translation="MIKETAMPHRALLLVDLQNDFCAGGALAVPEGDSTVEVANRLID
WCQSRGEAVIASQDWHPANHGSFASQHGVEPYTPGQLGGLRQTFWPEHCVQNSEGAQL
HPLLNQKEIAAVFHKGENPLVDSYSAFFDNGRRQKTALDDWLRDHEIDELIVMGLATD
YCVKFTVLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQ
G"
misc_feature complement(1490228..1490860)
/gene="ydjB"
/locus_tag="SF1455"
/note="bifunctional nicotinamidase/pyrazinamidase; Region:
PRK11609"
/db_xref="CDD:183228"
misc_feature complement(order(1490399..1490401,1490534..1490536,
1490837..1490839))
/gene="ydjB"
/locus_tag="SF1455"
/note="catalytic triad [active]"
/db_xref="CDD:238493"
misc_feature complement(order(1490609..1490611,1490705..1490707,
1490711..1490713))
/gene="ydjB"
/locus_tag="SF1455"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238493"
misc_feature complement(1490411..1490416)
/gene="ydjB"
/locus_tag="SF1455"
/note="conserved cis-peptide bond [active]"
/db_xref="CDD:238493"
gene complement(1490877..1491893)
/gene="ansA"
/locus_tag="SF1456"
/db_xref="GeneID:1024663"
CDS complement(1490877..1491893)
/gene="ansA"
/locus_tag="SF1456"
/note="Code: EJ; COG: COG0252"
/codon_start=1
/transl_table=11
/product="cytoplasmic asparaginase I"
/protein_id="NP_707346.1"
/db_xref="GeneID:1024663"
/translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
EMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAPNYPINEVTLFFNNRLYRGNR
TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY
PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
KVNMSGYATGNALAHAGVIDGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
TPDD"
misc_feature complement(1490889..1491893)
/gene="ansA"
/locus_tag="SF1456"
/note="cytoplasmic asparaginase I; Provisional; Region:
ansA; PRK09461"
/db_xref="CDD:181876"
misc_feature complement(order(1491405..1491407,1491543..1491545,
1491618..1491626,1491711..1491716,1491852..1491857))
/gene="ansA"
/locus_tag="SF1456"
/note="active site"
/db_xref="CDD:199207"
misc_feature complement(order(1490964..1490966,1490976..1490978,
1490988..1490990,1491045..1491047,1491057..1491071,
1491078..1491080,1491150..1491152,1491162..1491170,
1491174..1491176,1491201..1491206,1491213..1491215,
1491222..1491227,1491231..1491260,1491264..1491266,
1491390..1491407,1491537..1491542,1491606..1491608,
1491615..1491620,1491690..1491695,1491699..1491719,
1491726..1491728,1491819..1491827,1491852..1491854))
/gene="ansA"
/locus_tag="SF1456"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:199207"
gene complement(1492060..1493916)
/gene="sppA"
/locus_tag="SF1457"
/db_xref="GeneID:1024676"
CDS complement(1492060..1493916)
/gene="sppA"
/locus_tag="SF1457"
/note="Code: NO; COG: COG0616"
/codon_start=1
/transl_table=11
/product="protease 4"
/protein_id="NP_707347.2"
/db_xref="GeneID:1024676"
/translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
TIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYA
LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
RAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
misc_feature complement(1492063..1493916)
/gene="sppA"
/locus_tag="SF1457"
/note="signal peptide peptidase SppA; Region: PRK10949"
/db_xref="CDD:182860"
gene 1494095..1494628
/gene="ydjA"
/locus_tag="SF1458"
/db_xref="GeneID:1024667"
CDS 1494095..1494628
/gene="ydjA"
/locus_tag="SF1458"
/note="Code: C; COG: COG0778"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707348.1"
/db_xref="GeneID:1024667"
/translation="MINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVI
EGEGCERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCKENHKVPRWEQE
MSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLK
ASTSINVPDPTPFVTYF"
misc_feature 1494095..1494625
/gene="ydjA"
/locus_tag="SF1458"
/note="putative oxidoreductase; Provisional; Region:
PRK10828"
/db_xref="CDD:182761"
misc_feature order(1494104..1494106,1494155..1494160,1494164..1494172,
1494176..1494187,1494191..1494193,1494203..1494205,
1494209..1494226,1494389..1494394,1494398..1494403,
1494410..1494415,1494422..1494427,1494434..1494439,
1494446..1494451,1494467..1494469,1494473..1494475,
1494509..1494514,1494533..1494535,1494539..1494541)
/gene="ydjA"
/locus_tag="SF1458"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:380312"
misc_feature order(1494104..1494112,1494179..1494181,1494185..1494193,
1494392..1494394,1494401..1494406,1494464..1494478)
/gene="ydjA"
/locus_tag="SF1458"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:380312"
gene 1494745..1495788
/gene="selD"
/locus_tag="SF1459"
/db_xref="GeneID:1027483"
CDS 1494745..1495788
/gene="selD"
/locus_tag="SF1459"
/note="Code: E; COG: COG0709"
/codon_start=1
/transl_table=11
/product="selenophosphate synthetase"
/protein_id="NP_707349.2"
/db_xref="GeneID:1027483"
/translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
IEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTER
NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKTTAAEFGIELTAIGEL
VPARGGRAMVEIR"
misc_feature 1494745..1495785
/gene="selD"
/locus_tag="SF1459"
/note="selenide, water dikinase SelD; Region: PRK00943"
/db_xref="CDD:234870"
gene 1495793..1497754
/gene="topB"
/locus_tag="SF1460"
/db_xref="GeneID:1024660"
CDS 1495793..1497754
/gene="topB"
/locus_tag="SF1460"
/note="Code: L; COG: COG0550"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase III"
/protein_id="NP_707350.2"
/db_xref="GeneID:1024660"
/translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA
INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL
GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
DKDLKKVLRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
SADKKKAAPRKRSAKKSPPADEAGSGAIA"
misc_feature 1495793..1497718
/gene="topB"
/locus_tag="SF1460"
/note="DNA topoisomerase 3; Region: PRK07726"
/db_xref="CDD:236078"
gene 1497770..1498921
/gene="ynjI"
/locus_tag="SF1461"
/db_xref="GeneID:1024705"
CDS 1497770..1498921
/gene="ynjI"
/locus_tag="SF1461"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707351.1"
/db_xref="GeneID:1024705"
/translation="MLFESYSEISSGSRKFVGYFFAWIKLSPLKYVITGNVMKKVLLQ
NHPGSEKYSFNGWGIFNSNFERVIKENKAMLLCKWGFYLTCVVAVMFVFAAITSNGLN
ERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQAKGIEPLSIEKLQALQLIAPY
RFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSIDIISKRRESLENQWGIEDSESYC
ALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFAVFPSDYISDCANNRSGKSSAKLI
WAAELSWMISISSTAFQNGTIEEELAWHYIMLASRKAHELFESEEDYQKNSLMGFLYW
HICCYRRKLTDAELEACYRYDKQFWEHYSKKCRWPIRNVPWGASSVKYS"
misc_feature 1497881..1498918
/gene="ynjI"
/locus_tag="SF1461"
/note="hypothetical protein; Provisional; Region:
PRK11380"
/db_xref="CDD:236903"
gene complement(1499038..1500204)
/gene="gdhA"
/locus_tag="SF1462"
/db_xref="GeneID:1024664"
CDS complement(1499038..1500204)
/gene="gdhA"
/locus_tag="SF1462"
/note="Code: E; COG: COG0334"
/codon_start=1
/transl_table=11
/product="glutamate dehydrogenase"
/protein_id="NP_707352.1"
/db_xref="GeneID:1024664"
/translation="MIQFRVVWVDDRNQIQVNRAWRVQFSSAIGPYKGGMRFHPSVNL
SILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGKVMRFCQTLMTELYRHLGAD
TDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFT
EAMLKRHGMGFEGMSVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKE
KLARLIEIKASRDGRAADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQL
IANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGW
KAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
misc_feature complement(1499041..1500204)
/gene="gdhA"
/locus_tag="SF1462"
/note="NADP-specific glutamate dehydrogenase; Region:
PRK09414"
/db_xref="CDD:181834"
mobile_element 1500239..1501569
/mobile_element_type="insertion sequence:IS2"
gene 1500285..1500695
/locus_tag="SF1463"
/db_xref="GeneID:1023413"
CDS 1500285..1500695
/locus_tag="SF1463"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707353.3"
/db_xref="GeneID:1023413"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 1500330..1500692
/locus_tag="SF1463"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 1500653..1501558
/locus_tag="SF1464"
/db_xref="GeneID:1026378"
CDS 1500653..1501558
/locus_tag="SF1464"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707354.1"
/db_xref="GeneID:1026378"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature 1500653..1501555
/locus_tag="SF1464"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene 1501953..1502225
/locus_tag="SF1465"
/db_xref="GeneID:1024682"
CDS 1501953..1502225
/locus_tag="SF1465"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707355.1"
/db_xref="GeneID:1024682"
/translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLLWRRVKP"
misc_feature 1502091..1502219
/locus_tag="SF1465"
/note="Protein of unknown function (DUF1496); Region:
DUF1496; pfam07383"
/db_xref="CDD:429436"
gene complement(1502191..1502598)
/locus_tag="SF1466"
/db_xref="GeneID:1024670"
CDS complement(1502191..1502598)
/locus_tag="SF1466"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="pyrimidine (deoxy)nucleoside triphosphate
pyrophosphohydrolase"
/protein_id="NP_707356.1"
/db_xref="GeneID:1024670"
/translation="MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVELDES
QQQALVRELNEELDIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV
WCSPEEALQYPLAPADIPLLEAFMALRAARAAD"
misc_feature complement(1502194..1502598)
/locus_tag="SF1466"
/note="pyrimidine (deoxy)nucleoside triphosphate
diphosphatase; Region: PRK10546"
/db_xref="CDD:182536"
gene 1502685..1503305
/locus_tag="SF1467"
/db_xref="GeneID:1024648"
CDS 1502685..1503305
/locus_tag="SF1467"
/note="Code: I; COG: COG0558"
/codon_start=1
/transl_table=11
/product="cytochrome oxidase"
/protein_id="NP_707357.2"
/db_xref="GeneID:1024648"
/translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP
FLALGWYLAALVVILLNRLLDGLDGALARRRGLTDAGGFLDISLDFLFYALVPFGFIL
AAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
ILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ"
misc_feature 1502766..1503299
/locus_tag="SF1467"
/note="Phosphatidylglycerophosphate synthase [Lipid
transport and metabolism]; Region: PgsA; COG0558"
/db_xref="CDD:440324"
gene complement(1503314..1504636)
/locus_tag="SF1468"
/pseudo
/db_xref="GeneID:1024658"
misc_feature complement(1503314..1504636)
/locus_tag="SF1468"
/note="Similar to Escherichia coli K12 thiosulfate sulfur
transferase gi: 1788054 (441 aa). BLAST with identity of
97% in 440 aa. This CDS contains an in-frame stop codon.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1504688..1505341)
/locus_tag="SF1469"
/db_xref="GeneID:1024673"
CDS complement(1504688..1505341)
/locus_tag="SF1469"
/note="Code: G; COG: COG1130"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_707358.2"
/db_xref="GeneID:1024673"
/translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
ATLKGNARRNAVNDALERSGLDGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEP
FSRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR"
misc_feature complement(1504709..1505341)
/locus_tag="SF1469"
/note="ABC-type uncharacterized transport system YnjBCD,
ATPase component [General function prediction only];
Region: YnjD; COG4136"
/db_xref="CDD:443311"
gene complement(1505341..1506767)
/locus_tag="SF1470"
/pseudo
/db_xref="GeneID:1024653"
misc_feature complement(1505341..1506767)
/locus_tag="SF1470"
/note="Similar to Escherichia coli K12 transport system
permease gi: 1788052 (497 aa). BLAST with identity of 96%
in 476 aa. This CDS contains an in-frame stop codon. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(1506785..1509391)
/locus_tag="SF1472"
/pseudo
/db_xref="GeneID:1024669"
misc_feature complement(1506785..1509391)
/locus_tag="SF1472"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788051 (390 aa). BLAST with
identity of 97% in 868 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
/pseudo
mobile_element 1507637..1509064
/mobile_element_type="insertion sequence:IS4"
gene 1507704..1509050
/locus_tag="SF1471"
/db_xref="GeneID:1024668"
CDS 1507704..1509050
/locus_tag="SF1471"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_707359.1"
/db_xref="GeneID:1024668"
/translation="MFPDSFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSNRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature 1507794..1508792
/locus_tag="SF1471"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene complement(1509400..1509947)
/locus_tag="SF1473"
/pseudogene="unknown"
/db_xref="GeneID:1024662"
gene complement(1509947..1510651)
/gene="ydjZ"
/locus_tag="SF1474"
/db_xref="GeneID:1024691"
CDS complement(1509947..1510651)
/gene="ydjZ"
/locus_tag="SF1474"
/note="Code: S; COG: COG0398"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707361.2"
/db_xref="GeneID:1024691"
/translation="MKIQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAFA
AVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSW
TSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFD
PISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTELFILFALTVV
IFMAKKIWLERQKRND"
misc_feature complement(1509956..1510534)
/gene="ydjZ"
/locus_tag="SF1474"
/note="Uncharacterized membrane protein YdjX, related to
fungal oxalate transporter, TVP38/TMEM64 family [Function
unknown]; Region: TVP38; COG0398"
/db_xref="CDD:440167"
gene complement(1510669..1511508)
/gene="ydjY"
/locus_tag="SF1475"
/db_xref="GeneID:1024684"
CDS complement(1510669..1511508)
/gene="ydjY"
/locus_tag="SF1475"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707362.2"
/db_xref="GeneID:1024684"
/translation="MKALRCALFYNSVWRAWRCLFSSSSQNSTPDTNMWICLLRAAAH
LLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPL
RVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYAPPKAFYEALKEAG
GTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLT
AAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKHGEVKFKGNASVLPADNTLATVTFK
ITE"
misc_feature complement(1510678..1511205)
/gene="ydjY"
/locus_tag="SF1475"
/note="YdjY domain; Region: ydjY_domain; NF040466"
/db_xref="CDD:468506"
gene complement(1511351..1512061)
/gene="ydjX"
/locus_tag="SF1476"
/db_xref="GeneID:1024651"
CDS complement(1511351..1512061)
/gene="ydjX"
/locus_tag="SF1476"
/note="Code: S; COG: COG0398"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707363.2"
/db_xref="GeneID:1024651"
/translation="MNAERNFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG
LFGYSLYILLFINAPLFLLPGSILVIAGGIVFGPLLGTQLSLIAATLASSCSFLLARW
LGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGFTTIAFWP
YTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILIQLAKLYARHKH
VDLSASRRSPLTHPKNEG"
misc_feature complement(1511408..1512061)
/gene="ydjX"
/locus_tag="SF1476"
/note="Uncharacterized membrane protein YdjX, related to
fungal oxalate transporter, TVP38/TMEM64 family [Function
unknown]; Region: TVP38; COG0398"
/db_xref="CDD:440167"
gene complement(1512228..1513034)
/gene="xthA"
/locus_tag="SF1477"
/db_xref="GeneID:1024701"
CDS complement(1512228..1513034)
/gene="xthA"
/locus_tag="SF1477"
/note="Code: L; COG: COG0708"
/codon_start=1
/transl_table=11
/product="exonuclease III"
/protein_id="NP_707364.2"
/db_xref="GeneID:1024701"
/translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEETQRRIIMAEIPSLLGN
VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD
IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGVVDTFRHANPQTADRFSWFDYRSK
GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
misc_feature complement(1512234..1513034)
/gene="xthA"
/locus_tag="SF1477"
/note="exonuclease III; Provisional; Region: PRK11756"
/db_xref="CDD:236970"
misc_feature complement(order(1512258..1512260,1512576..1512578,
1512582..1512584,1512699..1512701,1512708..1512710,
1512933..1512935,1513014..1513016))
/gene="xthA"
/locus_tag="SF1477"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:197320"
misc_feature complement(order(1512258..1512263,1512348..1512350,
1512576..1512578,1512582..1512584,1512708..1512710,
1512933..1512935,1513014..1513016))
/gene="xthA"
/locus_tag="SF1477"
/note="putative catalytic site [active]"
/db_xref="CDD:197320"
misc_feature complement(order(1512258..1512260,1512267..1512272,
1512348..1512353,1512357..1512359,1512387..1512392,
1512399..1512401,1512576..1512578,1512582..1512584,
1512672..1512674,1512693..1512695,1512699..1512701,
1512708..1512710,1512852..1512857,1512933..1512935,
1512993..1513001,1513005..1513010))
/gene="xthA"
/locus_tag="SF1477"
/note="active site"
/db_xref="CDD:197320"
misc_feature complement(order(1512258..1512263,1512933..1512935,
1513008..1513010))
/gene="xthA"
/locus_tag="SF1477"
/note="metal binding site A [ion binding]; metal-binding
site"
/db_xref="CDD:197320"
misc_feature complement(order(1512267..1512272,1512387..1512392,
1512672..1512674,1512693..1512695,1512699..1512701,
1512708..1512710,1512852..1512857,1512993..1513001,
1513005..1513010))
/gene="xthA"
/locus_tag="SF1477"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:197320"
misc_feature complement(order(1512258..1512260,1512351..1512353,
1512357..1512359,1512399..1512401,1512576..1512578,
1512582..1512584,1512699..1512701,1512708..1512710))
/gene="xthA"
/locus_tag="SF1477"
/note="putative AP binding site [nucleotide binding];
other site"
/db_xref="CDD:197320"
misc_feature complement(order(1512258..1512260,1512576..1512578,
1512582..1512584,1512708..1512710))
/gene="xthA"
/locus_tag="SF1477"
/note="putative metal binding site B [ion binding]; other
site"
/db_xref="CDD:197320"
gene 1513480..1514700
/gene="cstC"
/locus_tag="SF1478"
/pseudo
/db_xref="GeneID:1024659"
misc_feature 1513480..1514700
/gene="cstC"
/locus_tag="SF1478"
/note="Similar to Escherichia coli
N-(alpha)-acetylornithine-(delta)-aminotransferase gb:
AAB51148.1 (406 aa). BLAST with identity of 99% in 407 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 1514700..1515731
/locus_tag="SF1479"
/db_xref="GeneID:1024657"
CDS 1514700..1515731
/locus_tag="SF1479"
/note="Code: E; COG: COG3138"
/codon_start=1
/transl_table=11
/product="arginine succinyltransferase"
/protein_id="NP_707365.2"
/db_xref="GeneID:1024657"
/translation="MVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAIK
TWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNV
YNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVA
EMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLSQ
EAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVEV
AEGQPAQGDFPACLVANENYHHFRVVLARTDPATERLILTAAQLDALKCHAGDRVRLV
RLCAEEKTA"
misc_feature 1514700..1515728
/locus_tag="SF1479"
/note="arginine succinyltransferase; Provisional; Region:
PRK10456"
/db_xref="CDD:182474"
gene 1515671..1517149
/locus_tag="SF1480"
/db_xref="GeneID:1024647"
CDS 1515671..1517149
/locus_tag="SF1480"
/note="Code: C; COG: COG1012"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="NP_707366.3"
/db_xref="GeneID:1024647"
/translation="MPRRGSRSSGAPVRRGENSMTLWINGDWITGQGASRVKRNPVSG
EVLWQGNDADAAQVEQACRAARAAFPRWARLSLAERQVVVERFAGLLESNKAELTAII
ARETGKPRWEAATEVTAMINKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVF
GPYNFPGHLPNGHIVPALLAGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQG
GRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVAD
IDAAVHLTIQSAFVTAGQRCTCARRLLLKSGAQGDAFLASLVAVSQRLTPGNWDDEPQ
PFIGGLISEQAAQQVVTAWQQLEAMGGRTLLAPRLLQAGTSLLTPGIIEMTGVGGVPD
EEVFGPFLRVWRYDTFDEAIRMANNTRFGLFCGLVSPEREKFDQLLLEARAGIVNWNK
PLTGAASTAPFGGIGASGNHRPSACMPQITAHGLWRAWSRTR"
misc_feature 1515728..1517092
/locus_tag="SF1480"
/note="succinylglutamic semialdehyde dehydrogenase;
Reviewed; Region: astD; PRK09457"
/db_xref="CDD:181873"
misc_feature order(1516148..1516162,1516184..1516186,1516229..1516231,
1516235..1516240,1516379..1516390,1516397..1516399,
1516406..1516411,1516454..1516462,1516556..1516558,
1516850..1516852,1516856..1516858,1516934..1516936,
1517051..1517053)
/locus_tag="SF1480"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143414"
misc_feature order(1516160..1516162,1516454..1516456,1516547..1516549,
1516556..1516558)
/locus_tag="SF1480"
/note="catalytic residues [active]"
/db_xref="CDD:143414"
gene 1517202..1518535
/locus_tag="SF1481"
/pseudo
/db_xref="GeneID:1024690"
misc_feature 1517202..1518535
/locus_tag="SF1481"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788041 (448 aa). BLAST with
identity of 97% in 445 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 1518624..1519496
/gene="ydjS"
/locus_tag="SF1482"
/db_xref="GeneID:1024681"
CDS 1518624..1519496
/gene="ydjS"
/locus_tag="SF1482"
/note="Code: E; COG: COG2988"
/codon_start=1
/transl_table=11
/product="succinylglutamate desuccinylase"
/protein_id="NP_707367.1"
/db_xref="GeneID:1024681"
/translation="MLELTPLTPPQGALVISAGIHGNETAPVEMLDALLGAISHGEIP
LRWRLLVILGNPPALKQGKRYCHSDMNRMFGGRWQLFAESGETCRARELEQCLEDFYD
QGKESVRWHLDLHTAIRGSLHPQFGVLPQRDIPWDEKFLTWLGAAGLEALVFHQEPGG
TFTHFSVRHFGALACTLELGKALPFGQNDLRQFAVTASAIAALLSGESVGIVRTPPLR
YRVVSQITRHSPSFEMHMASDTLNFMPFEKGTLLAQDGEERFTVTHDVEYVLFPNPLV
ALGLRAGLMLEKIS"
misc_feature 1518627..1519493
/gene="ydjS"
/locus_tag="SF1482"
/note="succinylglutamate desuccinylase; Provisional;
Region: PRK05324"
/db_xref="CDD:235408"
misc_feature order(1518684..1518686,1518693..1518695,1518813..1518815,
1518834..1518839,1518966..1518968,1519005..1519007,
1519101..1519103,1519113..1519115,1519155..1519157)
/gene="ydjS"
/locus_tag="SF1482"
/note="active site"
/db_xref="CDD:349428"
gene 1519826..1520311
/gene="spy"
/locus_tag="SF1483"
/db_xref="GeneID:1024692"
CDS 1519826..1520311
/gene="spy"
/locus_tag="SF1483"
/note="Code: S; COG: COG3678"
/codon_start=1
/transl_table=11
/product="periplasmic protein"
/protein_id="NP_707368.1"
/db_xref="GeneID:1024692"
/translation="MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKF
GPHQDMMFKDLNLTDAQKQQIHEIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAE
AQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATA
E"
misc_feature 1519826..1520308
/gene="spy"
/locus_tag="SF1483"
/note="periplasmic protein; Reviewed; Region: PRK10455"
/db_xref="CDD:182473"
misc_feature order(1520075..1520077,1520087..1520089,1520096..1520101,
1520111..1520113,1520117..1520119,1520129..1520131,
1520138..1520140,1520150..1520152,1520162..1520164,
1520174..1520176,1520183..1520188,1520195..1520197,
1520204..1520206,1520237..1520242,1520249..1520251)
/gene="spy"
/locus_tag="SF1483"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:197366"
gene 1520514..1521089
/locus_tag="SF1484"
/db_xref="GeneID:1024695"
CDS 1520514..1521089
/locus_tag="SF1484"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707369.2"
/db_xref="GeneID:1024695"
/translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
ANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFTADQVVKAKLTAGQM
SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGVCWFD
GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
misc_feature 1520514..1521086
/locus_tag="SF1484"
/note="environmental stress-induced protein Ves; Region:
PRK11396"
/db_xref="CDD:236905"
gene complement(1521049..1521936)
/locus_tag="SF1485"
/db_xref="GeneID:1024688"
CDS complement(1521049..1521936)
/locus_tag="SF1485"
/note="Code: L; COG: COG0322"
/codon_start=1
/transl_table=11
/product="nucleotide excision repair endonuclease"
/protein_id="NP_707370.2"
/db_xref="GeneID:1024688"
/translation="MVRRLTSPRLEFEAAAIYEYPEHLHSFLNDLPTRPGVYLFHGES
DTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ
QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQSIA
DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPL
LSGNYEITELDPANDQRAS"
misc_feature complement(1521079..1521936)
/locus_tag="SF1485"
/note="excinuclease Cho; Region: PRK10545"
/db_xref="CDD:182535"
gene complement(1522166..1522993)
/gene="nadE"
/locus_tag="SF1486"
/db_xref="GeneID:1024696"
CDS complement(1522166..1522993)
/gene="nadE"
/locus_tag="SF1486"
/note="Code: H; COG: COG0171"
/codon_start=1
/transl_table=11
/product="NAD synthetase"
/protein_id="NP_707371.1"
/db_xref="GeneID:1024696"
/translation="MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV
LGISGGQDSTLAGKLCQMAINELRQETRNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLTALGCPEHLYKKAPTADLEDDR
PSLPDEVALGVTYDNIDDYLEGKNLPEQVARTIENWYLKTEHKRRPPINVFDDFWKK"
misc_feature complement(1522184..1522990)
/gene="nadE"
/locus_tag="SF1486"
/note="ammonia-dependent NAD(+) synthetase; Region: nadE;
PRK00768"
/db_xref="CDD:234831"
gene 1523195..1523533
/gene="osmE"
/locus_tag="SF1487"
/db_xref="GeneID:1026055"
CDS 1523195..1523533
/gene="osmE"
/locus_tag="SF1487"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator OsmE"
/protein_id="NP_707372.1"
/db_xref="GeneID:1026055"
/translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
EYDTDPQAAK"
misc_feature 1523204..1523530
/gene="osmE"
/locus_tag="SF1487"
/note="osmotically-inducible lipoprotein OsmE; Region:
PRK11251"
/db_xref="CDD:183058"
gene 1523832..1524152
/gene="celA"
/locus_tag="SF1488"
/db_xref="GeneID:1024680"
CDS 1523832..1524152
/gene="celA"
/locus_tag="SF1488"
/note="Code: G; COG: COG1440"
/codon_start=1
/transl_table=11
/product="PTS system N,N'-diacetylchitobiose-specific
transporter subunit IIB"
/protein_id="NP_707373.1"
/db_xref="GeneID:1024680"
/translation="MEKKHIYLFCSAGMSISLLVSKMRAQAEKYEVPVIIEAFPETLA
GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
AAAN"
misc_feature 1523832..1524149
/gene="celA"
/locus_tag="SF1488"
/note="PTS sugar transporter subunit IIB; Region:
PRK10499"
/db_xref="CDD:182499"
misc_feature order(1523859..1523861,1523865..1523870,1523874..1523879,
1524006..1524008,1524081..1524083)
/gene="celA"
/locus_tag="SF1488"
/note="active site"
/db_xref="CDD:99906"
misc_feature 1523859..1523879
/gene="celA"
/locus_tag="SF1488"
/note="P-loop; other site"
/db_xref="CDD:99906"
misc_feature 1523859..1523861
/gene="celA"
/locus_tag="SF1488"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99906"
gene 1524237..1525586
/gene="celB"
/locus_tag="SF1489"
/db_xref="GeneID:1024718"
CDS 1524237..1525586
/gene="celB"
/locus_tag="SF1489"
/note="Code: G; COG: COG1455"
/codon_start=1
/transl_table=11
/product="PTS system N,N'-diacetylchitobiose-specific
transporter subunit IIC"
/protein_id="NP_707374.1"
/db_xref="GeneID:1024718"
/translation="MSNVIASLEKVLLPFAVKIGKQPHVNAIKNDFIRLMPLTLAGAM
FVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFI
GMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVA
EMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQII
MDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQ
YGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLAL
PSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTM
PTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANP"
misc_feature 1524237..1525580
/gene="celB"
/locus_tag="SF1489"
/note="PTS system N,N'-diacetylchitobiose-specific
transporter subunit IIC; Provisional; Region: PRK10297"
/db_xref="CDD:182363"
gene 1525645..1525995
/gene="celC"
/locus_tag="SF1490"
/db_xref="GeneID:1026385"
CDS 1525645..1525995
/gene="celC"
/locus_tag="SF1490"
/note="Code: G; COG: COG1447"
/codon_start=1
/transl_table=11
/product="PTS system N,N'-diacetylchitobiose-specific
transporter subunit IIA"
/protein_id="NP_707375.2"
/db_xref="GeneID:1026385"
/translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ
GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARE
LITELIELHEKLKA"
misc_feature 1525645..1525989
/gene="celC"
/locus_tag="SF1490"
/note="PTS N,N'-diacetylchitobiose transporter subunit
IIA; Region: PRK10454"
/db_xref="CDD:182472"
misc_feature order(1525693..1525695,1525855..1525857,1525903..1525908,
1525927..1525929)
/gene="celC"
/locus_tag="SF1490"
/note="methionine cluster [active]"
/db_xref="CDD:238133"
misc_feature order(1525738..1525740,1525909..1525911,1525915..1525923)
/gene="celC"
/locus_tag="SF1490"
/note="active site"
/db_xref="CDD:238133"
misc_feature 1525909..1525911
/gene="celC"
/locus_tag="SF1490"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238133"
misc_feature 1525918..1525920
/gene="celC"
/locus_tag="SF1490"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238133"
misc_feature 1526003..1527622
/note="Similar to Escherichia coli K12 negative
transcriptional regulator of cel operon gi: 1788030 (281
aa). BLAST with identity of 98% in 540 aa. This CDS has
been disrupted by insertion. The sequence has been checked
and is believed to be correct."
gene 1526003..1526701
/locus_tag="SF1490a"
/pseudogene="unknown"
/db_xref="GeneID:16608322"
mobile_element complement(1526680..1527447)
/mobile_element_type="insertion sequence:IS1"
gene complement(1526695..1527090)
/gene="insB"
/locus_tag="SF1492"
/db_xref="GeneID:1024679"
CDS complement(1526695..1527090)
/gene="insB"
/locus_tag="SF1492"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707376.1"
/db_xref="GeneID:1024679"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1526698..1527087)
/gene="insB"
/locus_tag="SF1492"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1527117..1527392)
/gene="insA"
/locus_tag="SF1493"
/db_xref="GeneID:1024702"
CDS complement(1527117..1527392)
/gene="insA"
/locus_tag="SF1493"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707377.1"
/db_xref="GeneID:1024702"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1527120..1527371)
/gene="insA"
/locus_tag="SF1493"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1527727..1529079
/gene="celF"
/locus_tag="SF1494"
/db_xref="GeneID:1024697"
CDS 1527727..1529079
/gene="celF"
/locus_tag="SF1494"
/note="Code: G; COG: COG1486"
/codon_start=1
/transl_table=11
/product="6-phospho-beta-glucosidase"
/protein_id="NP_707378.1"
/db_xref="GeneID:1024697"
/translation="MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGG
KAKLDIIFDLCQRMIDNAGVPMKLYKTLDCREALKDADFVTTQLRVGQLPARELDERI
PLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVY
RHTGFKRFIGVCNIPIGMKMFIHDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRF
AELLDGVASGQLKVSGVKNIFDLPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEY
YKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDAACEVINAIYNDKQA
EHYVNIPHHGHIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIA
ASNAALSGEFNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH
"
misc_feature 1527739..1529034
/gene="celF"
/locus_tag="SF1494"
/note="Glycoside Hydrolases Family 4;
Phospho-beta-glucosidase; Region: GH4_P_beta_glucosidase;
cd05296"
/db_xref="CDD:133432"
misc_feature order(1527763..1527768,1527772..1527774,1527844..1527849,
1527865..1527867,1527985..1527993,1528060..1528062,
1528120..1528122,1528168..1528170,1528174..1528176,
1528594..1528596,1528660..1528662,1528675..1528677)
/gene="celF"
/locus_tag="SF1494"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133432"
misc_feature order(1528012..1528014,1528060..1528062,1528174..1528176,
1528243..1528245,1528333..1528335,1528498..1528500,
1528570..1528572,1528660..1528665,1528675..1528677)
/gene="celF"
/locus_tag="SF1494"
/note="sugar binding site [chemical binding]; other site"
/db_xref="CDD:133432"
misc_feature order(1528240..1528242,1528333..1528335)
/gene="celF"
/locus_tag="SF1494"
/note="divalent metal binding site [ion binding]; other
site"
/db_xref="CDD:133432"
misc_feature order(1528300..1528302,1528309..1528311,1528357..1528359,
1528366..1528368,1528717..1528719,1528753..1528755,
1528810..1528815,1528819..1528821,1528825..1528836)
/gene="celF"
/locus_tag="SF1494"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:133432"
misc_feature order(1528456..1528458,1528462..1528464,1528471..1528479,
1528513..1528515,1528519..1528524,1528852..1528857,
1528876..1528878,1528888..1528890,1528909..1528911,
1528933..1528935,1528942..1528947,1528975..1528980,
1528984..1528986,1528990..1528992)
/gene="celF"
/locus_tag="SF1494"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133432"
gene 1529092..1529850
/gene="ydjC"
/locus_tag="SF1495"
/db_xref="GeneID:1025623"
CDS 1529092..1529850
/gene="ydjC"
/locus_tag="SF1495"
/note="Code: S; COG: COG3394"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707379.1"
/db_xref="GeneID:1025623"
/translation="MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAID
HAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQ
ELASQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAG
DLPANLRSSQGFSSAFYGEEISEALFLQVLDDASHRGDPSLEVMCHPAFIDNTIRQSA
YCFPRLTELEVLTSASLKYAIAERGYRLGSYLDV"
misc_feature 1529092..1529847
/gene="ydjC"
/locus_tag="SF1495"
/note="chitin disaccharide deacetylase; Region: PRK02134"
/db_xref="CDD:235007"
misc_feature order(1529119..1529130,1529266..1529274,1529449..1529466,
1529707..1529709,1529758..1529760)
/gene="ydjC"
/locus_tag="SF1495"
/note="YdjC motif; other site"
/db_xref="CDD:212114"
misc_feature order(1529119..1529124,1529128..1529130,1529266..1529268,
1529272..1529274,1529452..1529454,1529458..1529460,
1529464..1529466,1529707..1529709,1529758..1529760)
/gene="ydjC"
/locus_tag="SF1495"
/note="putative active site [active]"
/db_xref="CDD:212114"
misc_feature order(1529137..1529139,1529203..1529205,1529212..1529226,
1529323..1529328,1529332..1529334,1529395..1529397,
1529419..1529421,1529428..1529430)
/gene="ydjC"
/locus_tag="SF1495"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:212114"
gene complement(1529897..1532158)
/gene="katE"
/locus_tag="SF1496"
/db_xref="GeneID:1024677"
CDS complement(1529897..1532158)
/gene="katE"
/locus_tag="SF1496"
/note="Code: P; COG: COG0753"
/codon_start=1
/transl_table=11
/product="hydroperoxidase II"
/protein_id="NP_707380.2"
/db_xref="GeneID:1024677"
/translation="MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTP
PGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGNRGP
TLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKIT
PVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFV
HAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHT
FRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEY
ELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFH
PGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHR
MGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHP
RLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIEL
TDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKAMK
AKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDAN
YYLMEAYKHLKPIALAGDARKFKATIKVADQGEEGIVEADSTDGSFMDELLTLMAEHR
VWSRIPKIDKIPA"
misc_feature complement(1529900..1532149)
/gene="katE"
/locus_tag="SF1496"
/note="hydroperoxidase II; Provisional; Region: katE;
PRK11249"
/db_xref="CDD:236886"
gene 1532341..1532604
/locus_tag="SF1497"
/db_xref="GeneID:1024686"
CDS 1532341..1532604
/locus_tag="SF1497"
/codon_start=1
/transl_table=11
/product="cell division modulator"
/protein_id="NP_707381.2"
/db_xref="GeneID:1024686"
/translation="MRLVKPVMKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVW
MLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE"
misc_feature 1532362..1532601
/locus_tag="SF1497"
/note="cell division activator CedA; Region: PRK10113"
/db_xref="CDD:182246"
gene 1532881..1533621
/gene="ydjO"
/locus_tag="SF1498"
/db_xref="GeneID:1024715"
CDS 1532881..1533621
/gene="ydjO"
/locus_tag="SF1498"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707382.1"
/db_xref="GeneID:1024715"
/translation="MRREMFSTNLIQSNYGDLNIKSLAFDSFKERLESTMAALTFFIS
TGQCDCDEIAESNFNRMIAYMSNINYDASKLGAPALSFDTYLQDNVKYRVIINNLYGS
EFRIRDINENFVGMDFTCEFRPEKMTNLINIKNRLVIHYLRTIYYEKNYIHPAGSIFA
AIQKNESLLKFPSIISMLNINLLFNPLNLPGMGSGVLEDIMSIPDSSLRKRLGYEVLS
FSLQAHSLSQECIDKLDIFFADDLFKYG"
mobile_element complement(1533617..1534384)
/mobile_element_type="insertion sequence:IS1"
gene complement(1533632..1534027)
/gene="insB"
/locus_tag="SF1499"
/db_xref="GeneID:1024698"
CDS complement(1533632..1534027)
/gene="insB"
/locus_tag="SF1499"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707383.1"
/db_xref="GeneID:1024698"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMPDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1533635..1534024)
/gene="insB"
/locus_tag="SF1499"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1534054..1534329)
/gene="insA"
/locus_tag="SF1500"
/db_xref="GeneID:1024693"
CDS complement(1534054..1534329)
/gene="insA"
/locus_tag="SF1500"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707384.1"
/db_xref="GeneID:1024693"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1534057..1534308)
/gene="insA"
/locus_tag="SF1500"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(1534476..1535866)
/locus_tag="SF1501"
/pseudogene="unknown"
/db_xref="GeneID:1024678"
gene complement(1535999..1536589)
/locus_tag="SF1502"
/db_xref="GeneID:1024675"
CDS complement(1535999..1536589)
/locus_tag="SF1502"
/note="Code: R; COG: COG1988"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707386.2"
/db_xref="GeneID:1024675"
/translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA
LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
WMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY"
misc_feature complement(1536005..1536589)
/locus_tag="SF1502"
/note="metal-dependent hydrolase; Region: PRK11648"
/db_xref="CDD:183256"
gene complement(1536752..1537420)
/gene="yniC"
/locus_tag="SF1503"
/db_xref="GeneID:1024713"
CDS complement(1536752..1537420)
/gene="yniC"
/locus_tag="SF1503"
/note="Code: R; COG: COG0637"
/codon_start=1
/transl_table=11
/product="2-deoxyglucose-6-phosphate phosphatase"
/protein_id="NP_707387.1"
/db_xref="GeneID:1024713"
/translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN
ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
DLLG"
misc_feature complement(1536755..1537420)
/gene="yniC"
/locus_tag="SF1503"
/note="hexitol phosphatase HxpB; Region: PRK10826"
/db_xref="CDD:236770"
misc_feature complement(order(1536890..1536895,1536902..1536907,
1536977..1536979,1537073..1537078,1537370..1537384))
/gene="yniC"
/locus_tag="SF1503"
/note="active site"
/db_xref="CDD:319808"
misc_feature complement(order(1536890..1536895,1536902..1536907,
1536977..1536979,1537073..1537078,1537370..1537384))
/gene="yniC"
/locus_tag="SF1503"
/note="active site"
/db_xref="CDD:319808"
gene 1537567..1538103
/locus_tag="SF1504"
/db_xref="GeneID:1024689"
CDS 1537567..1538103
/locus_tag="SF1504"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707388.1"
/db_xref="GeneID:1024689"
/translation="MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
GINAVMLDFAHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
PVICIAAGYVFFSLLGFI"
misc_feature 1537609..1538097
/locus_tag="SF1504"
/note="YniB-like protein; Region: YniB; pfam14002"
/db_xref="CDD:433637"
gene complement(1538144..1539004)
/locus_tag="SF1505"
/db_xref="GeneID:1024724"
CDS complement(1538144..1539004)
/locus_tag="SF1505"
/note="Code: S; COG: COG3001"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707389.1"
/db_xref="GeneID:1024724"
/translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACDWGDR
ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA
QQSLDRLLAA"
misc_feature complement(1538150..1539004)
/locus_tag="SF1505"
/note="Fructosamine kinase; Region: Fructosamin_kin;
pfam03881"
/db_xref="CDD:427564"
gene complement(1539110..1539400)
/locus_tag="SF1506"
/db_xref="GeneID:1024672"
CDS complement(1539110..1539400)
/locus_tag="SF1506"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707390.1"
/db_xref="GeneID:1024672"
/translation="MASGDLVHYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG
NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK"
misc_feature complement(1539122..1539376)
/locus_tag="SF1506"
/note="Endoribonuclease GhoS; Region: GhoS; pfam11080"
/db_xref="CDD:431644"
gene complement(1539501..1540430)
/gene="pfkB"
/locus_tag="SF1507"
/db_xref="GeneID:1024716"
CDS complement(1539501..1540430)
/gene="pfkB"
/locus_tag="SF1507"
/note="Code: G; COG: COG1105"
/codon_start=1
/transl_table=11
/product="6-phosphofructokinase"
/protein_id="NP_707391.2"
/db_xref="GeneID:1024716"
/translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQNQG
IRCIIDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
misc_feature complement(1539504..1540430)
/gene="pfkB"
/locus_tag="SF1507"
/note="6-phosphofructokinase 2; Provisional; Region:
PRK10294"
/db_xref="CDD:182361"
misc_feature complement(order(1540020..1540022,1540260..1540262,
1540266..1540268,1540284..1540286,1540296..1540298))
/gene="pfkB"
/locus_tag="SF1507"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:238570"
misc_feature complement(order(1539663..1539665,1539669..1539671,
1539741..1539743,1539759..1539761,1539870..1539872,
1539876..1539878,1539933..1539935))
/gene="pfkB"
/locus_tag="SF1507"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:238570"
gene 1540750..1541475
/locus_tag="SF1508"
/db_xref="GeneID:1024723"
CDS 1540750..1541475
/locus_tag="SF1508"
/note="Code: M; COG: COG3137"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707392.2"
/db_xref="GeneID:1024723"
/translation="MLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQS
GNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDY
LFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQ
PLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWN
SEPPESAPEHTDRRTTLSLGYSM"
misc_feature 1540765..1541472
/locus_tag="SF1508"
/note="Putative salt-induced outer membrane protein YdiY
[Cell wall/membrane/envelope biogenesis]; Region: YdiY;
COG3137"
/db_xref="CDD:442371"
gene complement(1541528..1541746)
/locus_tag="SF1507a"
/db_xref="GeneID:16608323"
CDS complement(1541528..1541746)
/locus_tag="SF1507a"
/codon_start=1
/transl_table=11
/product="transmembrane anchor protein"
/protein_id="YP_008439246.1"
/db_xref="GeneID:16608323"
/translation="MTMCTTPPDGCNNKKSLDACPFCYTPLSRTRDMQDTGMPTKRFD
KKHWKMVVVLLAICGAMLLLRWAAMIWG"
misc_feature complement(1541531..1541632)
/locus_tag="SF1507a"
/note="small membrane protein YniD; Region: membrane_YniD;
NF041491"
/db_xref="CDD:469379"
gene complement(1541807..1542767)
/locus_tag="SF1509"
/pseudo
/db_xref="GeneID:1024712"
misc_feature complement(1541807..1542767)
/locus_tag="SF1509"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788015 (472 aa). BLAST with
identity of 99% in 320 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element complement(1542767..1543534)
/mobile_element_type="insertion sequence:IS1"
gene complement(1542782..1543177)
/gene="insB"
/locus_tag="SF1510"
/db_xref="GeneID:1024703"
CDS complement(1542782..1543177)
/gene="insB"
/locus_tag="SF1510"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707393.1"
/db_xref="GeneID:1024703"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1542785..1543174)
/gene="insB"
/locus_tag="SF1510"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1543204..1543479)
/gene="insA"
/locus_tag="SF1511"
/db_xref="GeneID:1024709"
CDS complement(1543204..1543479)
/gene="insA"
/locus_tag="SF1511"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707394.1"
/db_xref="GeneID:1024709"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1543207..1543458)
/gene="insA"
/locus_tag="SF1511"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1544438..1546366
/gene="thrS"
/locus_tag="SF1512"
/db_xref="GeneID:1023405"
CDS 1544438..1546366
/gene="thrS"
/locus_tag="SF1512"
/note="Code: J; COG: COG0441"
/codon_start=1
/transl_table=11
/product="threonyl-tRNA synthetase"
/protein_id="NP_707395.1"
/db_xref="GeneID:1023405"
/translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSIL
DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
IEKLQQEIRSRSLKQLEE"
misc_feature 1544438..1546354
/gene="thrS"
/locus_tag="SF1512"
/note="Threonyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: ThrS; COG0441"
/db_xref="CDD:440210"
gene 1546478..1546912
/gene="infC"
/locus_tag="SF1513"
/db_xref="GeneID:1026392"
CDS 1546478..1546912
/gene="infC"
/locus_tag="SF1513"
/note="Code: J; COG: COG0290"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-3"
/protein_id="NP_707396.1"
/db_xref="GeneID:1026392"
/translation="MSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKS
SKEQKKKQKVIQVKEIKFRPSTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQ
QIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ"
misc_feature 1546478..1546906
/gene="infC"
/locus_tag="SF1513"
/note="Translation initiation factor IF-3 [Translation,
ribosomal structure and biogenesis]; Region: InfC;
COG0290"
/db_xref="CDD:440059"
gene 1547009..1547206
/gene="rpmI"
/locus_tag="SF1514"
/db_xref="GeneID:1024707"
CDS 1547009..1547206
/gene="rpmI"
/locus_tag="SF1514"
/note="Code: J; COG: COG0291"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L35"
/protein_id="NP_707397.2"
/db_xref="GeneID:1024707"
/translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
RPKAMVSKGDLGLVIACLPYA"
misc_feature 1547009..1547200
/gene="rpmI"
/locus_tag="SF1514"
/note="Ribosomal protein L35 [Translation, ribosomal
structure and biogenesis]; Region: RpmI; COG0291"
/db_xref="CDD:440060"
gene 1547259..1547615
/gene="rplT"
/locus_tag="SF1515"
/db_xref="GeneID:1024687"
CDS 1547259..1547615
/gene="rplT"
/locus_tag="SF1515"
/note="Code: J; COG: COG0292"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L20"
/protein_id="NP_707398.1"
/db_xref="GeneID:1024687"
/translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
KVAFTTLVEKAKAALA"
misc_feature 1547262..1547603
/gene="rplT"
/locus_tag="SF1515"
/note="50S ribosomal protein L20; Provisional; Region:
rplT; PRK05185"
/db_xref="CDD:179959"
misc_feature order(1547274..1547291,1547295..1547306,1547319..1547342,
1547346..1547357,1547364..1547369,1547379..1547384,
1547391..1547435,1547439..1547447,1547454..1547456,
1547466..1547468,1547484..1547489,1547496..1547501,
1547508..1547510,1547532..1547540)
/gene="rplT"
/locus_tag="SF1515"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:197305"
misc_feature order(1547364..1547366,1547376..1547378,1547385..1547390,
1547394..1547399,1547406..1547408,1547523..1547534,
1547541..1547543,1547559..1547564,1547580..1547585)
/gene="rplT"
/locus_tag="SF1515"
/note="L21 binding site [polypeptide binding]; other site"
/db_xref="CDD:197305"
misc_feature order(1547427..1547429,1547436..1547441,1547448..1547450,
1547457..1547462,1547466..1547468,1547538..1547540,
1547547..1547549,1547556..1547558)
/gene="rplT"
/locus_tag="SF1515"
/note="L13 binding site [polypeptide binding]; other site"
/db_xref="CDD:197305"
gene 1548065..1549048
/gene="pheS"
/locus_tag="SF1517"
/db_xref="GeneID:1024708"
CDS 1548065..1549048
/gene="pheS"
/locus_tag="SF1517"
/note="Code: J; COG: COG0016"
/codon_start=1
/transl_table=11
/product="phenylalanyl-tRNA synthetase subunit alpha"
/protein_id="NP_707400.1"
/db_xref="GeneID:1024708"
/translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
DATRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
PNVLRNVSIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
misc_feature 1548065..1549045
/gene="pheS"
/locus_tag="SF1517"
/note="Phenylalanyl-tRNA synthetase alpha subunit
[Translation, ribosomal structure and biogenesis]; Region:
PheS; COG0016"
/db_xref="CDD:439787"
gene 1549063..1551450
/gene="pheT"
/locus_tag="SF1518"
/db_xref="GeneID:1024717"
CDS 1549063..1551450
/gene="pheT"
/locus_tag="SF1518"
/note="Code: J; COG: COG0072"
/codon_start=1
/transl_table=11
/product="phenylalanyl-tRNA synthetase subunit beta"
/protein_id="NP_707401.1"
/db_xref="GeneID:1024717"
/translation="MKFSELWLREWVNPAIDSDTLANQITMAGLEVDGVEPVAGSFHG
VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
SVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
CAFFSPLSITGRARRHGLHTDASHRYERGVDPVLQHKAMERATRLLIDICGGEAGPVI
DITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
EVITYSFVDPKVQQMIHPGVEALLLASPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV
LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
misc_feature 1549063..1551447
/gene="pheT"
/locus_tag="SF1518"
/note="phenylalanyl-tRNA synthetase subunit beta;
Reviewed; Region: pheT; PRK00629"
/db_xref="CDD:234804"
gene 1551455..1551754
/gene="ihfA"
/locus_tag="SF1519"
/db_xref="GeneID:1024710"
CDS 1551455..1551754
/gene="ihfA"
/locus_tag="SF1519"
/note="Code: L; COG: COG0776"
/codon_start=1
/transl_table=11
/product="integration host factor subunit alpha"
/protein_id="NP_707402.1"
/db_xref="GeneID:1024710"
/translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
misc_feature 1551455..1551745
/gene="ihfA"
/locus_tag="SF1519"
/note="integration host factor subunit alpha; Reviewed;
Region: ihfA; PRK00285"
/db_xref="CDD:178961"
misc_feature order(1551464..1551469,1551524..1551526,1551587..1551589,
1551593..1551601,1551605..1551607,1551617..1551619,
1551623..1551625,1551632..1551652,1551665..1551667,
1551671..1551673,1551680..1551682,1551686..1551688,
1551698..1551700,1551707..1551709,1551716..1551718)
/gene="ihfA"
/locus_tag="SF1519"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:259857"
misc_feature order(1551476..1551478,1551485..1551487,1551527..1551529,
1551539..1551541,1551548..1551553,1551557..1551562,
1551578..1551589,1551593..1551595,1551680..1551685,
1551689..1551691,1551695..1551697,1551722..1551727)
/gene="ihfA"
/locus_tag="SF1519"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:259857"
gene 1551855..1552835
/gene="btuC"
/locus_tag="SF1520"
/db_xref="GeneID:1024714"
CDS 1551855..1552835
/gene="btuC"
/locus_tag="SF1520"
/note="Code: PH; COG: COG0609"
/codon_start=1
/transl_table=11
/product="vtamin B12-transporter permease"
/protein_id="NP_707403.1"
/db_xref="GeneID:1024714"
/translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWF
TPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI
AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE
ISARQLGLPMWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL
PGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKAGR"
misc_feature 1551855..1552832
/gene="btuC"
/locus_tag="SF1520"
/note="vtamin B12-transporter permease; Provisional;
Region: PRK03784"
/db_xref="CDD:235159"
misc_feature order(1552086..1552088,1552098..1552106,1552467..1552472,
1552476..1552484,1552488..1552493,1552497..1552514,
1552518..1552526,1552647..1552649,1552668..1552670)
/gene="btuC"
/locus_tag="SF1520"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119348"
misc_feature order(1552101..1552103,1552107..1552109,1552122..1552124,
1552284..1552286,1552290..1552295,1552302..1552307,
1552314..1552319,1552326..1552328,1552335..1552340,
1552344..1552346,1552380..1552385,1552392..1552394,
1552617..1552619,1552773..1552775,1552782..1552787,
1552794..1552796,1552803..1552808,1552815..1552817)
/gene="btuC"
/locus_tag="SF1520"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119348"
misc_feature order(1552344..1552346,1552422..1552424,1552593..1552595,
1552605..1552607,1552740..1552742,1552764..1552766)
/gene="btuC"
/locus_tag="SF1520"
/note="putative PBP binding regions [active]"
/db_xref="CDD:119348"
gene 1552898..1553449
/gene="btuE"
/locus_tag="SF1521"
/db_xref="GeneID:1024729"
CDS 1552898..1553449
/gene="btuE"
/locus_tag="SF1521"
/note="Code: O; COG: COG0386"
/codon_start=1
/transl_table=11
/product="glutathione peroxidase"
/protein_id="NP_707404.1"
/db_xref="GeneID:1024729"
/translation="MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYE
QLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGE
GRHPLYQKLIAAAPTTVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGKVIQ
RFSPDMTPEDPIVMESIKLALAK"
misc_feature 1552898..1553446
/gene="btuE"
/locus_tag="SF1521"
/note="putative glutathione peroxidase; Provisional;
Region: btuE; PRK10606"
/db_xref="CDD:182585"
misc_feature order(1553006..1553008,1553108..1553110,1553330..1553332)
/gene="btuE"
/locus_tag="SF1521"
/note="catalytic residues [active]"
/db_xref="CDD:238207"
misc_feature order(1553105..1553107,1553114..1553116,1553120..1553122,
1553129..1553131,1553138..1553140,1553150..1553152)
/gene="btuE"
/locus_tag="SF1521"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238207"
gene 1553449..1554198
/gene="btuD"
/locus_tag="SF1522"
/db_xref="GeneID:1024735"
CDS 1553449..1554198
/gene="btuD"
/locus_tag="SF1522"
/note="Code: PH; COG: COG1120"
/codon_start=1
/transl_table=11
/product="vitamin B12-transporter ATPase"
/protein_id="NP_707405.1"
/db_xref="GeneID:1024735"
/translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEP
MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
EVLTPPNLAQAYGMNFRRLDIEGHRMLISTI"
misc_feature 1553461..1554192
/gene="btuD"
/locus_tag="SF1522"
/note="vitamin B12-transporter ATPase; Provisional;
Region: PRK03695"
/db_xref="CDD:235150"
gene 1554276..1554740
/gene="nlpC"
/locus_tag="SF1523"
/db_xref="GeneID:1024725"
CDS 1554276..1554740
/gene="nlpC"
/locus_tag="SF1523"
/note="Code: M; COG: COG0791"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_707406.1"
/db_xref="GeneID:1024725"
/translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLHLPRETKQQASIGTQIDKDELLPGDL
VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI"
misc_feature <1554393..1554737
/gene="nlpC"
/locus_tag="SF1523"
/note="bifunctional murein DD-endopeptidase/murein
LD-carboxypeptidase; Region: spr; PRK10838"
/db_xref="CDD:236773"
gene 1554987..1555700
/locus_tag="SF1524"
/db_xref="GeneID:1026757"
CDS 1554987..1555700
/locus_tag="SF1524"
/note="Code: T; COG: COG2200"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707407.1"
/db_xref="GeneID:1026757"
/translation="MKIFLENLYHSDCYFLPIRDNQQLLVGVELITHFSSEDGTVRIP
TSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLDRDNYAG
ELLKYPFIELLINENYPHLNEGKDNRDLLSLSQMYPLVLGNLGAGNSTMKAVFDGLFT
RVMLEKGFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTPEILAQITPFDFHAL
QGCLWPAVPINQITTLVQR"
misc_feature 1555026..1555646
/locus_tag="SF1524"
/note="EAL domain. This domain is found in diverse
bacterial signaling proteins. It is called EAL after its
conserved residues and is also known as domain of unknown
function 2 (DUF2). The EAL domain has been shown to
stimulate degradation of a second...; Region: EAL;
cl29561"
/db_xref="CDD:453023"
gene 1555764..1557200
/locus_tag="SF1525"
/db_xref="GeneID:1026408"
CDS 1555764..1557200
/locus_tag="SF1525"
/note="Code: S; COG: COG0397"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707408.1"
/db_xref="GeneID:1026408"
/translation="MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIP
SSLFKNAAGVWGGETLLPGMSPLAQVYSGHQFVVWAGQLGDGRGILLGEQLLADGTTM
DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
TVEPGAMLMRVAPSHLRFGHFEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLW
FNDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLREEFIDRAAFDDW
FARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEAL
RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
misc_feature 1555764..1557197
/locus_tag="SF1525"
/note="Protein adenylyltransferase (AMPylase) SelO/YdiU
(selenoprotein O) [Posttranslational modification, protein
turnover, chaperones]; Region: SelO; cl46173"
/db_xref="CDD:480513"
gene complement(1557204..1557422)
/locus_tag="SF1525a"
/db_xref="GeneID:16608324"
CDS complement(1557204..1557422)
/locus_tag="SF1525a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439247.1"
/db_xref="GeneID:16608324"
/translation="MLYQLLLIFMRYTDSRKLTPETDANHKTASPQPIRRITSQTLLG
PDGKLIIDHDGQEYLLRKTQAGKLLLTK"
misc_feature complement(1557207..1557374)
/locus_tag="SF1525a"
/note="hypothetical protein; Provisional; Region:
PRK10183"
/db_xref="CDD:182290"
gene complement(1557527..1558573)
/gene="aroH"
/locus_tag="SF1526"
/db_xref="GeneID:1024719"
CDS complement(1557527..1558573)
/gene="aroH"
/locus_tag="SF1526"
/note="Code: E; COG: COG0722"
/codon_start=1
/transl_table=11
/product="phospho-2-dehydro-3-deoxyheptonate aldolase"
/protein_id="NP_707409.1"
/db_xref="GeneID:1024719"
/translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK
ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMT
IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
QLEVCEDICQQIRNGSTEIAGIMAESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTE
RLVEKLAFAVDTRF"
misc_feature complement(1557530..1558573)
/gene="aroH"
/locus_tag="SF1526"
/note="Trp-sensitive 3-deoxy-7-phosphoheptulonate synthase
AroH; Region: PRK12756"
/db_xref="CDD:183726"
gene complement(1558730..1559563)
/gene="ydiA"
/locus_tag="SF1527"
/db_xref="GeneID:1024720"
CDS complement(1558730..1559563)
/gene="ydiA"
/locus_tag="SF1527"
/note="Code: S; COG: COG1806"
/codon_start=1
/transl_table=11
/product="PEP synthetase regulatory protein"
/protein_id="NP_707410.1"
/db_xref="GeneID:1024720"
/translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
CGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
Y"
misc_feature complement(1558733..1559545)
/gene="ydiA"
/locus_tag="SF1527"
/note="pyruvate, phosphate dikinase/phosphoenolpyruvate
synthase regulator; Region: PRK05339"
/db_xref="CDD:235419"
gene 1559895..1562273
/gene="ppsA"
/locus_tag="SF1528"
/db_xref="GeneID:1024744"
CDS 1559895..1562273
/gene="ppsA"
/locus_tag="SF1528"
/note="Code: G; COG: COG0574"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate synthase"
/protein_id="NP_707411.1"
/db_xref="GeneID:1024744"
/translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQP
ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG
KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ
ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL
VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV
TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPSEGVG
LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL
GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL
ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
misc_feature 1559910..1562270
/gene="ppsA"
/locus_tag="SF1528"
/note="phosphoenolpyruvate synthase; Validated; Region:
PRK06464"
/db_xref="CDD:235809"
gene complement(1562330..1564030)
/gene="ydiD"
/locus_tag="SF1529"
/db_xref="GeneID:1024704"
CDS complement(1562330..1564030)
/gene="ydiD"
/locus_tag="SF1529"
/note="Code: IQ; COG: COG0318"
/codon_start=1
/transl_table=11
/product="short chain acyl-CoA synthetase"
/protein_id="NP_707412.1"
/db_xref="GeneID:1024704"
/translation="MHPTGPQLGPDVLFRESKMKVTLTFNEQRRAAYRQQGLWGDASL
ADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPG
WCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLIL
PLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNIPLTTAITTHGDELAAVLFTSGTE
GLPKGVMLTHNNILASERAYCARLNLTWLDVFMMPAPLGHATGFLHGVTAPFLIGARS
VLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNLLEKQPADLSALRFFLCGGTTIP
KKVARECQQRSIKLLSVYGSTESSPHAVVNLDNSLSRFMHTDGYAAAGVEIKVVDDAR
KTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGR
KKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLS
LEEMAAFFSRKRVAKYKYPEHIVVIEKLPRTASDKIQKFLLRKDIIRRLTQDVCEEIE
"
misc_feature complement(1562333..1563973)
/gene="ydiD"
/locus_tag="SF1529"
/note="medium-chain fatty-acid--CoA ligase; Region:
PRK06087"
/db_xref="CDD:180393"
misc_feature complement(order(1563365..1563370,1563374..1563391,
1563398..1563400))
/gene="ydiD"
/locus_tag="SF1529"
/note="acyl-activating enzyme (AAE) consensus motif; other
site"
/db_xref="CDD:341229"
misc_feature complement(order(1562402..1562404,1562648..1562650,
1562681..1562683,1562690..1562692,1562726..1562728,
1562966..1562983,1563041..1563046,1563389..1563391))
/gene="ydiD"
/locus_tag="SF1529"
/note="putative AMP binding site [chemical binding]; other
site"
/db_xref="CDD:341229"
misc_feature complement(order(1562459..1562461,1562648..1562659,
1562681..1562683,1562690..1562692,1562726..1562728,
1562966..1562983,1563041..1563046,1563107..1563109,
1563116..1563121,1563125..1563127,1563266..1563271,
1563389..1563391))
/gene="ydiD"
/locus_tag="SF1529"
/note="putative active site [active]"
/db_xref="CDD:341229"
misc_feature complement(order(1562459..1562461,1562480..1562482,
1562651..1562659,1563044..1563046,1563107..1563109,
1563116..1563121,1563269..1563271))
/gene="ydiD"
/locus_tag="SF1529"
/note="putative CoA binding site [chemical binding]; other
site"
/db_xref="CDD:341229"
gene complement(1564033..1564326)
/gene="ydiT"
/locus_tag="SF1530"
/db_xref="GeneID:1024748"
CDS complement(1564033..1564326)
/gene="ydiT"
/locus_tag="SF1530"
/note="Code: C; COG: COG2440"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707413.1"
/db_xref="GeneID:1024748"
/translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILTENPDINEFRKLMKA
CPAGLYKQDDVGNIHFDPAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG"
misc_feature complement(1564036..1564308)
/gene="ydiT"
/locus_tag="SF1530"
/note="4Fe-4S dicluster domain; Region: Fer4_8; cl19102"
/db_xref="CDD:473136"
gene complement(1564323..1565612)
/gene="ydiS"
/locus_tag="SF1531"
/db_xref="GeneID:1024711"
CDS complement(1564323..1565612)
/gene="ydiS"
/locus_tag="SF1531"
/note="Code: C; COG: COG0644"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707414.1"
/db_xref="GeneID:1024711"
/translation="MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKN
MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS
YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD
GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
SAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA
KERADFSANSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMF
TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL"
misc_feature complement(1564326..1565612)
/gene="ydiS"
/locus_tag="SF1531"
/note="oxidoreductase; Provisional; Region: PRK10015"
/db_xref="CDD:182194"
gene complement(1565668..1566606)
/gene="ydiR"
/locus_tag="SF1532"
/db_xref="GeneID:1024740"
CDS complement(1565668..1566606)
/gene="ydiR"
/locus_tag="SF1532"
/note="Code: C; COG: COG2025"
/codon_start=1
/transl_table=11
/product="electron transfer flavoprotein subunit YdiR"
/protein_id="NP_707415.1"
/db_xref="GeneID:1024740"
/translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV
MPYGPKCIYVLEQNDALQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQL
NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH
QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAA
VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGVKVI
VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR"
misc_feature complement(1565671..1566606)
/gene="ydiR"
/locus_tag="SF1532"
/note="electron transfer flavoprotein subunit alpha;
Region: PRK11916"
/db_xref="CDD:183380"
gene complement(1566626..1567390)
/gene="ydiQ"
/locus_tag="SF1533"
/db_xref="GeneID:1024700"
CDS complement(1566626..1567390)
/gene="ydiQ"
/locus_tag="SF1533"
/note="Code: C; COG: COG2086"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707416.2"
/db_xref="GeneID:1024700"
/translation="MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAA
SQLATDDDEIAALTVAGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALA
AAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLE
DDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAEL
VGIRVPPQTERKHIILDNDSPEAIAELAEHLKKALN"
misc_feature complement(1566629..1567390)
/gene="ydiQ"
/locus_tag="SF1533"
/note="electron transfer flavoprotein; Region: PRK12342"
/db_xref="CDD:183455"
gene 1567712..1568212
/locus_tag="SF1534"
/pseudo
/db_xref="GeneID:1024746"
misc_feature 1567712..1568212
/locus_tag="SF1534"
/note="Similar to Escherichia coli K12 ARAC-type
regulatory protein gi: 1787987 (304 aa). BLAST with
identity of 98% in 160 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element 1568191..1568958
/mobile_element_type="insertion sequence:IS1"
gene 1568246..1568521
/gene="insA"
/locus_tag="SF1535"
/db_xref="GeneID:1024734"
CDS 1568246..1568521
/gene="insA"
/locus_tag="SF1535"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707417.1"
/db_xref="GeneID:1024734"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1568267..>1568518
/gene="insA"
/locus_tag="SF1535"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1568548..1568943
/gene="insB"
/locus_tag="SF1536"
/db_xref="GeneID:1024738"
CDS 1568548..1568943
/gene="insB"
/locus_tag="SF1536"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707418.1"
/db_xref="GeneID:1024738"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1568551..1568940
/gene="insB"
/locus_tag="SF1536"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1569506..1570267)
/locus_tag="SF1537"
/db_xref="GeneID:1024745"
CDS complement(1569506..1570267)
/locus_tag="SF1537"
/note="Code: K; COG: COG2207"
/codon_start=1
/transl_table=11
/product="transcriptional regulator YdeO"
/protein_id="NP_707419.1"
/db_xref="GeneID:1024745"
/translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
ERHFKEIGFNENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN
HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
FRKHFGNSPKRVSKEYRCQRHTGMNTGNTMSALAI"
misc_feature complement(1569509..1570267)
/locus_tag="SF1537"
/note="transcriptional regulator YdeO; Provisional;
Region: PRK09940"
/db_xref="CDD:182157"
gene complement(1570335..1570538)
/locus_tag="SF1537a"
/db_xref="GeneID:16608325"
CDS complement(1570335..1570538)
/locus_tag="SF1537a"
/codon_start=1
/transl_table=11
/product="two-protein-system connector protein SafA"
/protein_id="YP_008439248.1"
/db_xref="GeneID:16608325"
/translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLS
ISEMGRIARDLTHFIINSLQDWK"
misc_feature complement(1570347..1570538)
/locus_tag="SF1537a"
/note="Two-component-system connector protein; Region:
SafA; pfam17073"
/db_xref="CDD:319116"
gene complement(1570786..1573065)
/locus_tag="SF1538"
/db_xref="GeneID:1024706"
CDS complement(1570786..1573065)
/locus_tag="SF1538"
/note="Code: C; COG: COG0243"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707420.1"
/db_xref="GeneID:1024706"
/translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRHDVIAMFDMNKP
EGFDCPGCAWPDPKNSASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE
LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN
PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
KDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFPPPHAPGHAAIASMQA
ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS
VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
PLSGIPGYKSIPVELEPSN"
misc_feature complement(1570789..1573065)
/locus_tag="SF1538"
/note="acid resistance putative oxidoreductase YdeP;
Region: PRK09939"
/db_xref="CDD:182156"
gene complement(1573399..1574136)
/locus_tag="SF1539"
/db_xref="GeneID:1024760"
CDS complement(1573399..1574136)
/locus_tag="SF1539"
/codon_start=1
/transl_table=11
/product="minor fimbrial subunit, D-mannose specific
adhesin-like protein"
/protein_id="NP_707421.1"
/db_xref="GeneID:1024760"
/translation="MSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNV
TYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLG
SGNPRNFTWNIISNNSVVMLTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSF
YLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLGL
SATYGQTGNKVSAGTVQSVIGVTFIYE"
misc_feature complement(1573801..>1574136)
/locus_tag="SF1539"
/note="Mannose binding domain of FimH and related
proteins; Region: FimH_man-bind; cl07688"
/db_xref="CDD:447481"
misc_feature complement(order(1573816..1573818,1573822..1573824,
1573840..1573842,1573846..1573848,1574083..1574085,
1574089..1574091,1574104..1574112))
/locus_tag="SF1539"
/note="mannosyl binding site [chemical binding]; other
site"
/db_xref="CDD:198456"
misc_feature complement(1573402..>1573761)
/locus_tag="SF1539"
/note="Pilin (type 1 fimbrial protein) [Cell motility];
Region: FimA; COG3539"
/db_xref="CDD:442760"
mobile_element 1574149..1574916
/mobile_element_type="insertion sequence:IS1"
gene 1574204..1574479
/gene="insA"
/locus_tag="SF1540"
/db_xref="GeneID:1024757"
CDS 1574204..1574479
/gene="insA"
/locus_tag="SF1540"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707422.1"
/db_xref="GeneID:1024757"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1574225..>1574476
/gene="insA"
/locus_tag="SF1540"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1574506..1574901
/gene="insB"
/locus_tag="SF1541"
/db_xref="GeneID:1024739"
CDS 1574506..1574901
/gene="insB"
/locus_tag="SF1541"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707423.1"
/db_xref="GeneID:1024739"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1574509..1574898
/gene="insB"
/locus_tag="SF1541"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
mobile_element 1574917..1575840
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 1574979..1575797
/locus_tag="SF1542"
/db_xref="GeneID:1024754"
CDS 1574979..1575797
/locus_tag="SF1542"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707424.1"
/db_xref="GeneID:1024754"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKPEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1574979..1575770
/locus_tag="SF1542"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1576151..1576312)
/locus_tag="SF1542a"
/db_xref="GeneID:16608326"
CDS complement(1576151..1576312)
/locus_tag="SF1542a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439249.1"
/db_xref="GeneID:16608326"
/translation="MILRHRTGPAFQAIKDSLAVGLNALTLTDITKNATYGVEIESLV
LEINAPASS"
gene complement(1576309..1576512)
/locus_tag="SF1542b"
/db_xref="GeneID:16608327"
CDS complement(1576309..1576512)
/locus_tag="SF1542b"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439250.1"
/db_xref="GeneID:16608327"
/translation="MLERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAIT
PYTLMQAIAAEGDVVVSGATEPE"
misc_feature complement(1576348..1576485)
/locus_tag="SF1542b"
/note="Domain of unknown function (DUF1737); Region:
DUF1737; pfam08410"
/db_xref="CDD:429981"
gene 1576757..1577092
/gene="ycgW"
/locus_tag="SF1543"
/db_xref="GeneID:1024726"
CDS 1576757..1577092
/gene="ycgW"
/locus_tag="SF1543"
/codon_start=1
/transl_table=11
/product="anti-adapter protein IraM"
/protein_id="NP_707425.1"
/db_xref="GeneID:1024726"
/translation="MKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFT
LTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCTLQIC
PYGLKQQSP"
misc_feature 1576757..1577089
/gene="ycgW"
/locus_tag="SF1543"
/note="anti-adapter protein IraM; Provisional; Region:
PRK09919"
/db_xref="CDD:236633"
gene complement(1578004..1578080)
/locus_tag="SF4467"
/db_xref="GeneID:3161773"
tRNA complement(1578004..1578080)
/locus_tag="SF4467"
/product="tRNA-Arg"
/codon_recognized="AGA"
/db_xref="GeneID:3161773"
gene complement(1578182..1578257)
/locus_tag="SF4468"
/db_xref="GeneID:3161777"
tRNA complement(1578182..1578257)
/locus_tag="SF4468"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161777"
gene complement(1578402..1579223)
/locus_tag="SF1544"
/db_xref="GeneID:1024741"
CDS complement(1578402..1579223)
/locus_tag="SF1544"
/note="cryptic prophage-like protein"
/codon_start=1
/transl_table=11
/product="antitermination protein"
/protein_id="NP_707426.1"
/db_xref="GeneID:1024741"
/translation="MKLEDLPKYYSPKSPGLTDASASTSKDALSITDVMAAQGMTQNR
AEMGFSAFLGKMGISMNDRARATELLADYALSRCDRVAALRKLPAEIKPVVMRIMASY
AFEDYARSAASKKQCPCCYGEKFIESIVFTNKIQYPDGKPPVWAKCTKGVYPFYWEEW
KKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGY
ERLPSTEAFNAICEVTNQITRASWEKTVKKFYDALVTRFDIEEAWAERQLKKVTR"
misc_feature complement(1578891..1579151)
/locus_tag="SF1544"
/note="Antitermination protein; Region: Antiterm;
pfam03589"
/db_xref="CDD:427381"
misc_feature complement(1578651..>1578728)
/locus_tag="SF1544"
/note="Zinc finger domain of DnaJ and HSP40; Region:
DnaJ_zf; cl21539"
/db_xref="CDD:473904"
misc_feature complement(1578429..1578686)
/locus_tag="SF1544"
/note="Antitermination protein; Region: Antiterm;
pfam03589"
/db_xref="CDD:427381"
gene complement(1579238..1579594)
/gene="rus"
/locus_tag="SF1545"
/db_xref="GeneID:1024733"
CDS complement(1579238..1579594)
/gene="rus"
/locus_tag="SF1545"
/codon_start=1
/transl_table=11
/product="endodeoxyribonuclease RUS"
/protein_id="NP_707427.1"
/db_xref="GeneID:1024733"
/translation="MLIDLVLPYPPTVNTYWRRRGSTYFISEEGKRYRRAVALIVRQQ
RLKLSLSGRLAIKVIAEPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVRGQ
PVSGGRLGVKIYPIMH"
misc_feature complement(1579247..1579594)
/gene="rus"
/locus_tag="SF1545"
/note="Holliday junction resolvase RusA (prophage-encoded
endonuclease) [Replication, recombination and repair];
Region: RusA; COG4570"
/db_xref="CDD:443627"
gene complement(1579607..1580656)
/locus_tag="SF1546"
/db_xref="GeneID:1023944"
CDS complement(1579607..1580656)
/locus_tag="SF1546"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707428.1"
/db_xref="GeneID:1023944"
/translation="MRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRN
LPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHH
SETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERE
LSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQR
TKNLAPLPHAHQQQNPQQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYKRWVKTQPC
ACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDL
IFRFLDHAFATGVPG"
misc_feature complement(1579619..1580176)
/locus_tag="SF1546"
/note="Protein of unknown function (DUF968); Region:
DUF968; cl23554"
/db_xref="CDD:474016"
gene complement(1581003..1581251)
/locus_tag="SF1547"
/db_xref="GeneID:1024721"
CDS complement(1581003..1581251)
/locus_tag="SF1547"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707429.2"
/db_xref="GeneID:1024721"
/translation="MNIEELRKIFCEDGLYAVCVENGNIVSHYRIVCLQKNGAALINF
VDARVTDGFILRDGEFVTSLQALKEIGIKAGFSAFSEE"
gene complement(1581472..1581627)
/locus_tag="SF1547a"
/db_xref="GeneID:16608328"
CDS complement(1581472..1581627)
/locus_tag="SF1547a"
/codon_start=1
/transl_table=11
/product="regulatory protein"
/protein_id="YP_008439251.1"
/db_xref="GeneID:16608328"
/translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF
TAYEPEE"
misc_feature complement(1581487..1581609)
/locus_tag="SF1547a"
/note="Hok/gef family; Region: HOK_GEF; pfam01848"
/db_xref="CDD:426473"
gene complement(1581699..1581986)
/gene="relE"
/locus_tag="SF1548"
/db_xref="GeneID:1024736"
CDS complement(1581699..1581986)
/gene="relE"
/locus_tag="SF1548"
/note="Code: S; COG: COG2026"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707430.1"
/db_xref="GeneID:1024736"
/translation="MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKL
RGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL"
misc_feature complement(1581726..1581983)
/gene="relE"
/locus_tag="SF1548"
/note="mRNA-degrading endonuclease RelE, toxin component
of the RelBE toxin-antitoxin system [Defense mechanisms];
Region: RelE; COG2026"
/db_xref="CDD:441629"
gene complement(1581986..1582225)
/gene="relB"
/locus_tag="SF1549"
/db_xref="GeneID:1024732"
CDS complement(1581986..1582225)
/gene="relB"
/locus_tag="SF1549"
/note="Code: L; COG: COG3077"
/codon_start=1
/transl_table=11
/product="bifunctional antitoxin/transcriptional repressor
RelB"
/protein_id="NP_707431.1"
/db_xref="GeneID:1024732"
/translation="MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERL
PFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL"
misc_feature complement(1581989..1582225)
/gene="relB"
/locus_tag="SF1549"
/note="type II toxin-antitoxin system RelB/DinJ family
antitoxin; Region: PRK11235"
/db_xref="CDD:183047"
mobile_element complement(1582509..1583772)
/mobile_element_type="insertion sequence:IS600"
gene complement(1582552..1583265)
/locus_tag="SF1550"
/db_xref="GeneID:1023401"
CDS complement(1582552..1583265)
/locus_tag="SF1550"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 integrase core
domain-containing protein"
/protein_id="NP_707432.1"
/db_xref="GeneID:1023401"
/translation="MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQ
KRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYT
CEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHS
RLGNISPATFREKYHQMAA"
misc_feature complement(1582579..>1583265)
/locus_tag="SF1550"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1583406..1583708)
/locus_tag="SF1551"
/db_xref="GeneID:1024727"
CDS complement(1583406..1583708)
/locus_tag="SF1551"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707433.1"
/db_xref="GeneID:1024727"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(1583436..1583708)
/locus_tag="SF1551"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1583809..1584789
/locus_tag="SF1552"
/db_xref="GeneID:1024780"
CDS 1583809..1584789
/locus_tag="SF1552"
/note="Code: GEPR; COG: COG0477; proline permease II-like
protein"
/codon_start=1
/transl_table=11
/product="low-affinity transport protein"
/protein_id="NP_707434.1"
/db_xref="GeneID:1024780"
/translation="MGAGAEISGAGTMLAEYAPKGKRGIISSFVAMGTNCGTLSATAI
WAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWLRMNLKESPVFEKVNDSNQPTAKP
APAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFNKAIPTDALMISSIL
GFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSIIVDKSYAPSTIMVALIVIHN
CAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGFGPILAGIFCTMTESWYP
IAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRAAQPSRSL"
misc_feature <1583812..1584675
/locus_tag="SF1552"
/note="metabolite-proton symporter; Region: 2A0106;
TIGR00883"
/db_xref="CDD:273320"
gene 1584878..1586338
/gene="ydfI"
/locus_tag="SF1553"
/db_xref="GeneID:1024767"
CDS 1584878..1586338
/gene="ydfI"
/locus_tag="SF1553"
/note="Code: G; COG: COG0246"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707435.1"
/db_xref="GeneID:1024767"
/translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
ATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQM
DGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLEHPMVAADVQNPHQPKTATG
VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDVKLAQWIEDNVTFP
STMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAE
LVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRHAAYGMMLQEQAP
TLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKF
DLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIF
GDDLPDNSLFTAKVTEAYLSLLAHGAKATVAKYSVK"
misc_feature 1584893..1586326
/gene="ydfI"
/locus_tag="SF1553"
/note="Mannitol-1-phosphate/altronate dehydrogenases
[Carbohydrate transport and metabolism]; Region: MtlD;
COG0246"
/db_xref="CDD:440016"
gene complement(1586374..1586577)
/locus_tag="SF1554"
/db_xref="GeneID:1024779"
CDS complement(1586374..1586577)
/locus_tag="SF1554"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707436.1"
/db_xref="GeneID:1024779"
/translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
KTVVVEGCEEKLAPLDLIRLGMN"
misc_feature complement(1586383..1586577)
/locus_tag="SF1554"
/note="putative selenium-binding protein YdfZ; Region:
YdfZ_fam; TIGR03318"
/db_xref="CDD:132361"
gene complement(1586755..1587441)
/locus_tag="SF1555"
/pseudogene="unknown"
/db_xref="GeneID:1024774"
gene complement(1587530..1588276)
/gene="ydfG"
/locus_tag="SF1556"
/db_xref="GeneID:1024772"
CDS complement(1587530..1588276)
/gene="ydfG"
/locus_tag="SF1556"
/note="Code: R; COG: COG0300"
/codon_start=1
/transl_table=11
/product="malonic semialdehyde reductase"
/protein_id="NP_707438.2"
/db_xref="GeneID:1024772"
/translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELTDEL
GDNLYIAQLDVRNRAAIEEMLASLPAEWSNIDILVNNAGLALGMEPAHKASVEDWETM
IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
LRTDLHGTTVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
misc_feature complement(1587533..1588276)
/gene="ydfG"
/locus_tag="SF1556"
/note="bifunctional NADP-dependent 3-hydroxy acid
dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;
Region: PRK10538"
/db_xref="CDD:182531"
misc_feature complement(order(1587725..1587730,1587737..1587748,
1587824..1587826,1587836..1587838,1587875..1587883,
1587962..1587964,1588028..1588036,1588112..1588120,
1588178..1588186,1588241..1588252,1588256..1588258))
/gene="ydfG"
/locus_tag="SF1556"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187604"
misc_feature complement(order(1587539..1587541,1587776..1587781,
1587785..1587790,1587794..1587799,1587806..1587811,
1587818..1587823,1587827..1587835,1587839..1587871,
1587911..1587913,1587923..1587925,1587932..1587934,
1587941..1587946,1587953..1587958,1587965..1587970,
1587977..1587982,1587986..1587991,1588004..1588009,
1588103..1588105))
/gene="ydfG"
/locus_tag="SF1556"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187604"
misc_feature complement(order(1587539..1587592,1587596..1587598,
1587602..1587604,1587623..1587625,1587644..1587646,
1587785..1587793,1587797..1587802,1587809..1587811,
1587818..1587823,1587827..1587832,1587842..1587853,
1587857..1587868,1587932..1587934,1587941..1587943,
1587953..1587955,1587965..1587967,1587977..1587982,
1587986..1587991,1588004..1588006,1588103..1588105))
/gene="ydfG"
/locus_tag="SF1556"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:187604"
misc_feature complement(order(1587824..1587826,1587836..1587838,
1587875..1587877,1587959..1587961))
/gene="ydfG"
/locus_tag="SF1556"
/note="active site"
/db_xref="CDD:187604"
gene 1588413..1590458
/gene="dcp"
/locus_tag="SF1557"
/db_xref="GeneID:1024728"
CDS 1588413..1590458
/gene="dcp"
/locus_tag="SF1557"
/note="Code: E; COG: COG0339"
/codon_start=1
/transl_table=11
/product="dipeptidyl carboxypeptidase II"
/protein_id="NP_707439.2"
/db_xref="GeneID:1024728"
/translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
AIALNPQTPDFNNTILALEQSGELITRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV
LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQAKLL
GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHPVIYNVCNYQ
KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
GYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLHRQWRGKAPQIMPMLQHRGLNI"
misc_feature 1588413..1590452
/gene="dcp"
/locus_tag="SF1557"
/note="peptidyl-dipeptidase Dcp; Region: PRK10280"
/db_xref="CDD:182353"
gene complement(1590503..1591021)
/gene="ydeJ"
/locus_tag="SF1558"
/db_xref="GeneID:1024730"
CDS complement(1590503..1591021)
/gene="ydeJ"
/locus_tag="SF1558"
/note="Code: R; COG: COG1546"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707440.1"
/db_xref="GeneID:1024730"
/translation="MNINKDKIVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGG
KLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAI
ERADADVSIAITGYGGPEGGEDGTPAGTVWFAWHIKGQNYTAVMHFAGDCETVLALAV
RFALAQLLQLLL"
misc_feature complement(1590536..1591006)
/gene="ydeJ"
/locus_tag="SF1558"
/note="2-oxo-tetronate isomerase; Region: PRK03657"
/db_xref="CDD:235149"
mobile_element 1591523..1592784
/mobile_element_type="insertion sequence:IS600"
gene 1591925..1592743
/locus_tag="SF1559"
/db_xref="GeneID:1024737"
CDS 1591925..1592743
/locus_tag="SF1559"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707441.1"
/db_xref="GeneID:1024737"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1591925..1592716
/locus_tag="SF1559"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1593211..1594329)
/gene="ydeF"
/locus_tag="SF1560"
/db_xref="GeneID:1024761"
CDS complement(1593211..1594329)
/gene="ydeF"
/locus_tag="SF1560"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707442.1"
/db_xref="GeneID:1024761"
/translation="MATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILA
DKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAWFADNL
SSTSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQIWVK
RSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGDF
AEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNNLL
LWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVVL
TSLPPSSLFVILALVIIAAWVLMLKGIRARPWGQPALC"
misc_feature complement(1593214..1594326)
/gene="ydeF"
/locus_tag="SF1560"
/note="efflux MFS transporter YdeE; Region: PRK10054"
/db_xref="CDD:182213"
gene 1594692..1595492
/gene="ydeD"
/locus_tag="SF1561"
/db_xref="GeneID:1024762"
CDS 1594692..1595492
/gene="ydeD"
/locus_tag="SF1561"
/note="Code: GER; COG: COG0697"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707443.4"
/db_xref="GeneID:1024762"
/translation="MLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFAQFAFLF
CAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLHGKQLAGIALAIFGVLVLIEDSL
NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIWSALIPIIPFFVVS
LILDGSASMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLV
PVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS"
misc_feature 1594692..1595483
/gene="ydeD"
/locus_tag="SF1561"
/note="O-acetylserine/cysteine exporter; Region: PRK11453"
/db_xref="CDD:183142"
gene complement(1595523..1595741)
/gene="marB"
/locus_tag="SF1562"
/db_xref="GeneID:1024722"
CDS complement(1595523..1595741)
/gene="marB"
/locus_tag="SF1562"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707444.1"
/db_xref="GeneID:1024722"
/translation="MKPLSSAIAAALILFSAQSVAEQTTQPVVTSCANVVVVPPSQEQ
PPFDLNHMGTGSDKSDALGVPYYNQHAM"
misc_feature complement(1595526..1595720)
/gene="marB"
/locus_tag="SF1562"
/note="multiple antibiotic resistance protein MarB;
Region: PRK10106"
/db_xref="CDD:236651"
gene complement(1595773..1596156)
/gene="marA"
/locus_tag="SF1563"
/db_xref="GeneID:1026416"
CDS complement(1595773..1596156)
/gene="marA"
/locus_tag="SF1563"
/note="Code: K; COG: COG2207"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator MarA"
/protein_id="NP_707445.2"
/db_xref="GeneID:1026416"
/translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
PPHKYRMTNMQGESRFLHPLNHYNS"
misc_feature complement(1595776..1596156)
/gene="marA"
/locus_tag="SF1563"
/note="MDR efflux pump AcrAB transcriptional activator
MarA; Region: PRK11511"
/db_xref="CDD:236920"
gene complement(1596176..1596553)
/gene="marR"
/locus_tag="SF1564"
/db_xref="GeneID:1024771"
CDS complement(1596176..1596553)
/gene="marR"
/locus_tag="SF1564"
/note="Code: K; COG: COG1846"
/codon_start=1
/transl_table=11
/product="multiple antibiotic resistance protein"
/protein_id="NP_707446.4"
/db_xref="GeneID:1024771"
/translation="MVNQKKDRLLNEYLSPMDITAAQFKVLCSIRCAACITPVELKKV
LSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTSGAAICEQCHQLVGQDLHQ
ELTKNLTADEVATLEHLLKKVLP"
misc_feature complement(1596179..1596553)
/gene="marR"
/locus_tag="SF1564"
/note="helix_turn_helix, cAMP Regulatory protein
C-terminus; DNA binding domain of prokaryotic regulatory
proteins belonging to the catabolite activator protein
family; Region: HTH_CRP; cl46859"
/db_xref="CDD:481199"
gene 1596822..1597487
/gene="ydeB"
/locus_tag="SF1565"
/db_xref="GeneID:1024775"
CDS 1596822..1597487
/gene="ydeB"
/locus_tag="SF1565"
/note="Code: S; COG: COG2095"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707447.1"
/db_xref="GeneID:1024775"
/translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
TYH"
misc_feature 1596822..1597484
/gene="ydeB"
/locus_tag="SF1565"
/note="MarC family NAAT transporter; Region: PRK10995"
/db_xref="CDD:236814"
gene complement(1597512..1598702)
/locus_tag="SF1566"
/pseudogene="unknown"
/db_xref="GeneID:1024769"
gene complement(1598852..1599967)
/locus_tag="SF1567"
/db_xref="GeneID:1024776"
CDS complement(1598852..1599967)
/locus_tag="SF1567"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707449.1"
/db_xref="GeneID:1024776"
/translation="MVTPVSICNYISLPDDFPARNIAPQVKEVLKDFIDALSTIICDE
EWRTSLNTNSATKKIFNNLDNLSYIQRTSFRGNDTLYNEKVQFKLTYPVKNGRHKENI
EFQVVINLSPIYLDNFRHDGEINIFCAPNPKPVTMGRVFQTGVERVLFLFMNDFIEQF
PMINLGAPIKRAHTPHIEPLPPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWNNSE
VHRWFVNKDPNLITAILDITDSELKEDLLQSLMDSLGSNKHVQPEVCICFLSLLAEQE
SPHFQDLFLFFANMLLHYHQFMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKN
ETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH"
misc_feature complement(1598855..1599967)
/locus_tag="SF1567"
/note="putative protein YneK; Region: YneK; NF033404"
/db_xref="CDD:468015"
gene 1600263..1600982
/locus_tag="SF1568"
/pseudo
/db_xref="GeneID:1024756"
misc_feature 1600263..1600982
/locus_tag="SF1568"
/note="Similar to Escherichia coli K12 aldehyde
dehydrogenase gi: 1787805 (471 aa). BLAST with identity of
98% in 240 aa. This CDS has been truncated. The sequence
has been checked and is believed to be correct."
/pseudo
gene 1601046..1601972
/gene="yneH"
/locus_tag="SF1569"
/db_xref="GeneID:1024764"
CDS 1601046..1601972
/gene="yneH"
/locus_tag="SF1569"
/note="Code: E; COG: COG2066"
/codon_start=1
/transl_table=11
/product="glutaminase"
/protein_id="NP_707450.1"
/db_xref="GeneID:1024764"
/translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
QLEMEQGIPRNPFINTGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA
IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
misc_feature 1601052..1601969
/gene="yneH"
/locus_tag="SF1569"
/note="glutaminase; Provisional; Region: PRK00971"
/db_xref="CDD:234880"
gene 1601972..1602331
/locus_tag="SF1570"
/pseudogene="unknown"
/db_xref="GeneID:1024768"
gene 1602941..1603888
/locus_tag="SF1571"
/db_xref="GeneID:1024765"
CDS 1602941..1603888
/locus_tag="SF1571"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707452.2"
/db_xref="GeneID:1024765"
/translation="MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIAFI
VSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISV
GSPFSIPEMFSARLGIATMAICPIMVSFSVAAINLLMKQVALRADFDFLTQVYSRSGL
YEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLV
ARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASY
RTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV"
misc_feature 1603376..1603852
/locus_tag="SF1571"
/note="Diguanylate cyclase, GGDEF domain; Region: GGDEF;
pfam00990"
/db_xref="CDD:425976"
misc_feature order(1603481..1603483,1603610..1603612)
/locus_tag="SF1571"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:143635"
misc_feature order(1603496..1603498,1603505..1603510,1603520..1603522,
1603532..1603534,1603598..1603600,1603604..1603615)
/locus_tag="SF1571"
/note="active site"
/db_xref="CDD:143635"
misc_feature order(1603586..1603588,1603670..1603672)
/locus_tag="SF1571"
/note="I-site [active]"
/db_xref="CDD:143635"
gene 1604115..1605566
/gene="uxaB"
/locus_tag="SF1572"
/db_xref="GeneID:1024755"
CDS 1604115..1605566
/gene="uxaB"
/locus_tag="SF1572"
/note="Code: G; COG: COG0246"
/codon_start=1
/transl_table=11
/product="altronate oxidoreductase"
/protein_id="NP_707453.1"
/db_xref="GeneID:1024755"
/translation="MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDL
NSGVVVVRPIETSFPPSLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEY
DEFLKLAHNPEMRFVFSNTTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGA
LDKGWIIIPCELIDYNGDALRELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTG
YPRDEVAKLEEELGYHDDFLDTAEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKP
YKERKVAILNGAHTALVPVAFQAGLDTVGEAMNDAEICAFVEKAIYEEIIPVLDLPRD
ELESFASAVTGRFRNPYIKHQLLSIALNGMTKFRTRILPQLLAGQKANGTLPARLTFA
LAALIAFYRGERNGETYPVQDDAHWLERYQQLWSQHRDRVIGTQELVAIVLAEKDHWE
QDLTQVPGLVEQVANDLDAILEKGMREAVRPLC"
misc_feature 1604115..1605530
/gene="uxaB"
/locus_tag="SF1572"
/note="tagaturonate reductase; Region: PRK03643"
/db_xref="CDD:235147"
mobile_element complement(1605695..1607043)
/note="partial"
/mobile_element_type="insertion sequence:IS1294"
gene complement(1605863..1607061)
/locus_tag="SF1573"
/pseudogene="unknown"
/db_xref="GeneID:1024743"
gene complement(1607071..1607259)
/locus_tag="SF1574"
/db_xref="GeneID:1024786"
CDS complement(1607071..1607259)
/locus_tag="SF1574"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707455.1"
/db_xref="GeneID:1024786"
/translation="MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASI
LERRGDTAALTRLQHTGG"
gene 1607409..1608374
/locus_tag="SF1575"
/db_xref="GeneID:1024742"
CDS 1607409..1608374
/locus_tag="SF1575"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707456.1"
/db_xref="GeneID:1024742"
/translation="MIVITFNRATFPRLKITMIVRPQQHWLRRIFVWHGSVLSKISSR
LLLNFLFSIAVIFMLPWYTHLGIKFTLAPFSILGVAIAIFLGFRNNAGYARYVEARKL
WGQLMIASRSLLREVKTTLPDSASVREFARLQIAFAHCLRMTLRKQPQAEVLAHYLKT
GDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDILFISLNDRLNDISAVLAGCERI
AYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFISVLISYTFISLDCLAEELE
DPFGTENNDLPLDAICNAIEIDLLQMNDEAEIPAKILPDRHYQLT"
misc_feature 1607460..1608368
/locus_tag="SF1575"
/note="Predicted membrane chloride channel, bestrophin
family [Inorganic ion transport and metabolism]; Region:
YneE; COG3781"
/db_xref="CDD:442995"
gene complement(1608378..1609136)
/locus_tag="SF1576"
/db_xref="GeneID:1024758"
CDS complement(1608378..1609136)
/locus_tag="SF1576"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="trans-aconitate 2-methyltransferase"
/protein_id="NP_707457.1"
/db_xref="GeneID:1024758"
/translation="MSDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGN
STALLHQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPEQALDLIFANAS
LQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLA
GVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFL
TRYHQMLEEQYPLQENGQILLAFPRLFIVARRTE"
misc_feature complement(1608381..1609136)
/locus_tag="SF1576"
/note="trans-aconitate 2-methyltransferase; Provisional;
Region: PRK01683"
/db_xref="CDD:234970"
gene complement(1609176..1609466)
/locus_tag="SF1577"
/db_xref="GeneID:1024749"
CDS complement(1609176..1609466)
/locus_tag="SF1577"
/note="Code: S; COG: COG1359"
/codon_start=1
/transl_table=11
/product="autoinducer-2 (AI-2) modifying protein LsrG"
/protein_id="NP_707458.1"
/db_xref="GeneID:1024749"
/translation="MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDP
EVNSRFYIYEAYKDEDTVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP"
misc_feature complement(1609179..1609466)
/locus_tag="SF1577"
/note="(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione
isomerase; Region: PRK10486"
/db_xref="CDD:182494"
gene complement(1609490..1610260)
/locus_tag="SF1578"
/db_xref="GeneID:1023374"
CDS complement(1609490..1610260)
/locus_tag="SF1578"
/note="Code: G; COG: COG1830"
/codon_start=1
/transl_table=11
/product="autoinducer 2 aldolase"
/protein_id="NP_707459.1"
/db_xref="GeneID:1023374"
/translation="MQSRLSWIFNPKTGKTVMLAFDHGYFQGPTIGLERIDINIAPLF
EHADVLMCTRGILRSVVPPATNKPVVLRASGANSILAELSNEAVALSMDDAVRLNSCA
VAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAA
EMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPERETLEMCWQAIDQGASGVDMG
RNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLSEKQ"
misc_feature complement(1609493..1610260)
/locus_tag="SF1578"
/note="3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase;
Region: PRK08227"
/db_xref="CDD:181306"
misc_feature complement(order(1609571..1609579,1609637..1609645,
1609706..1609708,1609715..1609717))
/locus_tag="SF1578"
/note="putative active site; other site"
/db_xref="CDD:188645"
misc_feature complement(1609715..1609717)
/locus_tag="SF1578"
/note="catalytic residue [active]"
/db_xref="CDD:188645"
mobile_element complement(1610274..1611406)
/note="partial"
/mobile_element_type="insertion sequence:IS2"
gene complement(1610285..1611124)
/locus_tag="SF1579"
/db_xref="GeneID:1024766"
CDS complement(1610285..1611124)
/locus_tag="SF1579"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707460.3"
/db_xref="GeneID:1024766"
/translation="MSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTY
GYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALLLERKPAVPPSKRAHTGRVAVKE
SNQRWCSDGFEFCCDNGERLRVTFALDCCDREVLHWAVTTGGFNSETVQDVMLGAVER
RFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRC
LEI"
misc_feature complement(1610288..1611124)
/locus_tag="SF1579"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(1611782..1612605)
/gene="ydeV"
/locus_tag="SF1581"
/pseudo
/db_xref="GeneID:1024803"
misc_feature complement(1611782..1612605)
/gene="ydeV"
/locus_tag="SF1581"
/note="Similar to Escherichia coli K12 kinase gi: 1787789
(531 aa). BLAST with identity of 98% in 274 aa. This CDS
has been truncated. The sequence has been checked and is
believed to be correct."
/pseudo
gene complement(1612684..1613637)
/gene="ydeW"
/locus_tag="SF1582"
/db_xref="GeneID:1027794"
CDS complement(1612684..1613637)
/gene="ydeW"
/locus_tag="SF1582"
/note="Code: K; COG: COG2390"
/codon_start=1
/transl_table=11
/product="transcriptional regulator LsrR"
/protein_id="NP_707462.1"
/db_xref="GeneID:1027794"
/translation="MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTR
LKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRL
GIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGI
GQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDD
ATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTDIKIHNELIGLPLSALKTI
PVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS"
misc_feature complement(1612687..1613634)
/gene="ydeW"
/locus_tag="SF1582"
/note="transcriptional regulator LsrR; Provisional;
Region: PRK15418"
/db_xref="CDD:237962"
gene 1613886..1615421
/locus_tag="SF1583"
/db_xref="GeneID:1024806"
CDS 1613886..1615421
/locus_tag="SF1583"
/note="Code: G; COG: COG1129"
/codon_start=1
/transl_table=11
/product="autoinducer 2 ABC transporter ATP-binding
protein LsrA"
/protein_id="NP_707463.1"
/db_xref="GeneID:1024806"
/translation="MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLG
GNGAGKSTLMKIIAGITPADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLS
IKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSR
ILILDEPTASLTPAETERLFSRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTI
ALSGKTSELSTDDIIQAITPAVREKSLSASQKLWLELPGNRPQHAVGTPVLTLENLTG
EGFRNVSLTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNGKEINKLSTGE
RLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLERYRRALNI
KFNQPEQAARTLSGSNQQKILIAKCLEASPQALIVDEPTRGVDVSARNDIYQLLRSIA
AQNVAVLFISSDMEEIELMADRVYVMHQGEITHSALTGRDINVETIMRVAFGDSQRQE
ASC"
misc_feature 1613886..1615418
/locus_tag="SF1583"
/note="autoinducer 2 ABC transporter ATP-binding protein
LsrA; Provisional; Region: PRK15439"
/db_xref="CDD:185336"
gene 1615415..1616443
/gene="ydeY"
/locus_tag="SF1584"
/db_xref="GeneID:1024751"
CDS 1615415..1616443
/gene="ydeY"
/locus_tag="SF1584"
/note="Code: G; COG: COG1172"
/codon_start=1
/transl_table=11
/product="autoinducer 2 ABC transporter permease LsrC"
/protein_id="NP_707464.1"
/db_xref="GeneID:1024751"
/translation="MLKFIQNNREITALLAVVLLFVLPGFLDRQYLSVQTLTMVYSSA
QILILLAMGATLVMLTRNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLA
GFFNGALVAWLKIPAIVATLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLLGIS
AIGWLTIILVAFMAWLLAKTAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMA
ALAGIVFASQIGFILNQTGTGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQID
SVLVLLRIPAWWNDFIAGLVLLAVLVFDGRLRCALERNLRRQKYARFMTPPPSVKPAS
SGKKREAA"
misc_feature 1615415..1616440
/gene="ydeY"
/locus_tag="SF1584"
/note="autoinducer 2 ABC transporter permease LsrC;
Provisional; Region: PRK15432"
/db_xref="CDD:185330"
misc_feature 1615994..1616050
/gene="ydeY"
/locus_tag="SF1584"
/note="TM-ABC transporter signature motif [active]"
/db_xref="CDD:119321"
gene 1616443..1617435
/gene="ydeZ"
/locus_tag="SF1585"
/db_xref="GeneID:1024763"
CDS 1616443..1617435
/gene="ydeZ"
/locus_tag="SF1585"
/note="Code: G; COG: COG1172"
/codon_start=1
/transl_table=11
/product="autoinducer 2 import system permease LsrD"
/protein_id="NP_707465.1"
/db_xref="GeneID:1024763"
/translation="MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFIC
IGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGL
INAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDV
LGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMT
GLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLV
GYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP"
misc_feature 1616443..1617432
/gene="ydeZ"
/locus_tag="SF1585"
/note="autoinducer 2 ABC transporter permease LsrD;
Region: PRK15038"
/db_xref="CDD:184998"
misc_feature 1617034..1617090
/gene="ydeZ"
/locus_tag="SF1585"
/note="TM-ABC transporter signature motif [active]"
/db_xref="CDD:119321"
gene 1617447..1618470
/locus_tag="SF1586"
/pseudo
/db_xref="GeneID:1024759"
misc_feature 1617447..1618470
/locus_tag="SF1586"
/note="Similar to Escherichia coli K12 LACI-type
transcriptional regulator gi: 1787795 (341 aa). BLAST with
identity of 99% in 341 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
mobile_element 1618594..1619934
/mobile_element_type="insertion sequence:IS2"
gene 1618640..1619050
/locus_tag="SF1587"
/db_xref="GeneID:1024788"
CDS 1618640..1619050
/locus_tag="SF1587"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707466.3"
/db_xref="GeneID:1024788"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 1618685..1619047
/locus_tag="SF1587"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 1619099..1619923
/locus_tag="SF1588"
/db_xref="GeneID:1024783"
CDS 1619099..1619923
/locus_tag="SF1588"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707467.3"
/db_xref="GeneID:1024783"
/translation="MHVILRRTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTYGYRRV
WALLRRQAELDGMPAINAKRIYRLMRQNALLLERKLAVPPSKRAHTGRVAVKESNQRW
CSDGFEFRCDNGEKLRVTFALDCCDRKALHWAVTTGGFNSETVQDVMLGAVERRFGND
LPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYI
SIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI"
misc_feature 1619099..1619920
/locus_tag="SF1588"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(1619973..1620785)
/locus_tag="SF1589"
/db_xref="GeneID:1024777"
CDS complement(1619973..1620785)
/locus_tag="SF1589"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707468.1"
/db_xref="GeneID:1024777"
/translation="MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGY
RKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNP
DAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWW
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRER
IKKKIYGTREEARSDIFDYIEMFYNSKRRHGSSEQMSPTEYENQYYQRLGSV"
misc_feature complement(1620006..>1620782)
/locus_tag="SF1589"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1620842..1621126)
/locus_tag="SF1590"
/db_xref="GeneID:1024797"
CDS complement(1620842..1621126)
/locus_tag="SF1590"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707469.1"
/db_xref="GeneID:1024797"
/translation="MPMSGKRYPEEFKTEAVKQVVDRGYSVASVATRLDITTHSLYAW
IKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAAYFAKLSD"
misc_feature complement(1620860..1621126)
/locus_tag="SF1590"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(1621197..1622411)
/gene="rspA"
/locus_tag="SF1591"
/db_xref="GeneID:1024798"
CDS complement(1621197..1622411)
/gene="rspA"
/locus_tag="SF1591"
/note="Code: H; COG: COG1441"
/codon_start=1
/transl_table=11
/product="bifunctional D-altronate/D-mannonate
dehydratase"
/protein_id="NP_707470.1"
/db_xref="GeneID:1024798"
/translation="MKIVKAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVA
SYLQDHLCPRLIGRDAHRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN
MPLYQLLGGASREGVMVYCHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYG
MSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKLFDAVRNKFGFNEHLLHDMHHRLT
PIEAARFGKSIEDYRMFWMEDPTPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLI
EEQLIDYIRTTLTHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWV
PNFGVQEYMGYSEQMLEVFPHNWTFDNGYMHPGDKPGLGIEFDEKLAAKYPYEPAYLP
VARLEDGTLWNR"
misc_feature complement(1621203..1622411)
/gene="rspA"
/locus_tag="SF1591"
/note="D-galactonate dehydratase family protein; Region:
PRK15072"
/db_xref="CDD:237901"
misc_feature complement(order(1621389..1621391,1621470..1621472,
1621551..1621553,1621620..1621622,1621698..1621700,
1621704..1621706,1621776..1621778,1621965..1621967,
1621971..1621973,1622052..1622054))
/gene="rspA"
/locus_tag="SF1591"
/note="putative active site pocket [active]"
/db_xref="CDD:239438"
misc_feature complement(order(1621620..1621622,1621698..1621700,
1621776..1621778))
/gene="rspA"
/locus_tag="SF1591"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:239438"
gene complement(1622617..1622943)
/locus_tag="SF1592"
/db_xref="GeneID:1024787"
CDS complement(1622617..1622943)
/locus_tag="SF1592"
/note="Code: S; COG: COG1742"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707471.2"
/db_xref="GeneID:1024787"
/translation="MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLAL
FVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLSLYDWTGALIALCGMLIIV
AGWGRT"
misc_feature complement(1622629..1622943)
/locus_tag="SF1592"
/note="Uncharacterized inner membrane protein YnfA,
drug/metabolite transporter superfamily [General function
prediction only]; Region: YnfA; COG1742"
/db_xref="CDD:441348"
gene 1623078..1623419
/locus_tag="SF1593"
/db_xref="GeneID:1024782"
CDS 1623078..1623419
/locus_tag="SF1593"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707472.1"
/db_xref="GeneID:1024782"
/translation="MKITLSKRIGLLAFLLPCALALSTTVHAETNKLVIESGDSAQSR
QHAAMEKEQWNDTRNLRQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRC
LDRRTGRVITP"
misc_feature 1623108..1623416
/locus_tag="SF1593"
/note="DUF1283 family protein; Region: PRK13659"
/db_xref="CDD:184216"
gene 1623454..1624014
/gene="speG"
/locus_tag="SF1594"
/pseudo
/db_xref="GeneID:1024789"
misc_feature 1623454..1624014
/gene="speG"
/locus_tag="SF1594"
/note="Similar to Escherichia coli K12 spermidine
N1-acetyltransferase gi: 1787867 (187 aa). BLAST with
identity of 98% in 187 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1624017..1624763)
/gene="ynfC"
/locus_tag="SF1595"
/db_xref="GeneID:1024794"
CDS complement(1624017..1624763)
/gene="ynfC"
/locus_tag="SF1595"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707473.4"
/db_xref="GeneID:1024794"
/translation="MIENHLYSLVTVVKYKLLPCLLAIFLTGCDRTEVTLSFTPEMAS
FSNEFDFDPLRGPVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVAL
VLDANYYRDAETLEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYD
DQGYPLGKTTKSNDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHAN
PVDCQLIIVDEGVKPAVERVYTIKNTIDYY"
misc_feature complement(1624020..1624727)
/gene="ynfC"
/locus_tag="SF1595"
/note="YnfC family lipoprotein; Region: PRK02939"
/db_xref="CDD:179506"
gene 1624835..1625140
/locus_tag="SF1596"
/db_xref="GeneID:1024792"
CDS 1624835..1625140
/locus_tag="SF1596"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707474.2"
/db_xref="GeneID:1024792"
/translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE
SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYNRTTSGNVSAPAQSTQDGAPAEPQ"
misc_feature 1624910..1625071
/locus_tag="SF1596"
/note="Protein of unknown function (DUF1161); Region:
DUF1161; pfam06649"
/db_xref="CDD:429051"
gene 1625339..1626797
/locus_tag="SF1597"
/pseudogene="unknown"
/db_xref="GeneID:1026423"
gene complement(1627483..1628472)
/locus_tag="SF1599"
/db_xref="GeneID:1024773"
CDS complement(1627483..1628472)
/locus_tag="SF1599"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707477.2"
/db_xref="GeneID:1024773"
/translation="MTTIKDAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAK
TVKAMLNGVLKDAQENIPFPVEVLPTRNSLPTPIIAHTLADRSVVVPVRGGKRPEVVT
VPSGQEIVVEPIEQAILISEQTKLWDAKSSTGFTQGTLQQDAMNICENVVRTINARMV
DVLESSKLLKTVELPVLTGSLTAKADAIMDALYENTESSFGSEVSDYGIIAHESQLKA
LSRLAAKQGFSGEDAIVDMLGTDIAYYNGEDKGVFMLAKRFTALSFGCFRHDGENITV
VLSRDGDSQSHDLEILGKVFVVAEAATTIKMGTGSATAVLPVVKRLKFTKTEA"
gene complement(1628557..1629048)
/locus_tag="SF1600"
/db_xref="GeneID:1024770"
CDS complement(1628557..1629048)
/locus_tag="SF1600"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707478.1"
/db_xref="GeneID:1024770"
/translation="MMFNNNNWKLSVTDINLYENTVSLDGQPYPLSLAIKTLIPGYLS
GLPSTSREAMELLEALAEAGVTIGNFFSNDLMTAYGRRQMNKRAEAERIAKEQRLQAE
RMREENMTDAEWQKELQRREQVKAERRTYGESLRSATHSAGRSRAAIVADLESGGNWM
DSL"
misc_feature complement(<1628656..1628907)
/locus_tag="SF1600"
/note="Predicted Zn-dependent peptidase, M16 family
[General function prediction only]; Region: PqqL; COG0612"
/db_xref="CDD:440377"
gene complement(1629369..1629869)
/locus_tag="SF1601"
/db_xref="GeneID:1023400"
CDS complement(1629369..1629869)
/locus_tag="SF1601"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707479.2"
/db_xref="GeneID:1023400"
/translation="MTSDNKQEYTIHIFGQDITSQDGLFRLDEIRRVGIQIGKVEDNR
STEVARFMRTKAGRSLTNPENGFVKKINMGHLGTSWLADPVAAIEFGRWLDLGYGLAV
TRAFVSMTSSATVQSAVASAEDIKPETKEFIQRHGTGLYIAGREVSQAEYSDYQAVTA
GRCEWR"
gene complement(1629859..1630374)
/locus_tag="SF1602"
/db_xref="GeneID:1024784"
CDS complement(1629859..1630374)
/locus_tag="SF1602"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707480.2"
/db_xref="GeneID:1024784"
/translation="MNTELPVTNRQFLIILLTNAESSVDCCRYNLDLLKLSRWYAQAE
DWDYEKIREMYAEPIQSYLQTHTEEELKRGLQDIFYFNNPYTCEGDSEEMDWIASRSD
ADLKHISNAMMQVESKWSRRLQVLTEDYENGTFDKLVPPDAERLQAKADQEQRFKSFA
EALAGGASYDF"
gene complement(1630805..1631173)
/locus_tag="SF1603"
/db_xref="GeneID:1024800"
CDS complement(1630805..1631173)
/locus_tag="SF1603"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707481.1"
/db_xref="GeneID:1024800"
/translation="MARPIATHDNTFTKAYLQQHCGDLLSFDGQGDLSGWLDDVLTGA
GRLNESMASNTKPVSPYLILTQLLTHDTLTVSAVQESLSRKRVALGEPMVSTRYARYV
YATVVSASKSVQYHASKAGS"
gene complement(1631585..1632070)
/locus_tag="SF1604"
/db_xref="GeneID:1024795"
CDS complement(1631585..1632070)
/locus_tag="SF1604"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="NP_707482.1"
/db_xref="GeneID:1024795"
/translation="MSVVTGARSAEVCHLTKRDIVTLDNGLVCIDINEDGDGKSVKNK
HSVRLVPLTDGAYGFDLTSFLSWVDMQPDEGPLFGMTPSAYSSWFNSRVLTEALGDSQ
DVSLHSLRHWLATRMKERGVNLVDAQGILGHSSQSITYDLYGKGHAVGRLADVLKTAL
L"
misc_feature complement(1631636..1632058)
/locus_tag="SF1604"
/note="DNA breaking-rejoining enzymes, C-terminal
catalytic domain; Region: DNA_BRE_C; cl00213"
/db_xref="CDD:469662"
misc_feature complement(order(1631642..1631644,1631750..1631752,
1631801..1631803,1631807..1631809,1632044..1632049))
/locus_tag="SF1604"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:271175"
misc_feature complement(order(1631642..1631644,1631672..1631674,
1631741..1631743,1631750..1631752,1632047..1632049))
/locus_tag="SF1604"
/note="active site"
/db_xref="CDD:271175"
mobile_element complement(1632134..1633382)
/mobile_element_type="insertion sequence:IS911"
gene complement(1632142..1632981)
/locus_tag="SF1605"
/db_xref="GeneID:1024793"
CDS complement(1632142..1632981)
/locus_tag="SF1605"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_707483.1"
/db_xref="GeneID:1024793"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(1632151..1632960)
/locus_tag="SF1605"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(1633008..1633346)
/locus_tag="SF1606"
/db_xref="GeneID:1025465"
CDS complement(1633008..1633346)
/locus_tag="SF1606"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_707484.1"
/db_xref="GeneID:1025465"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(1633038..1633307)
/locus_tag="SF1606"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(1633380..1634417)
/locus_tag="SF1608"
/db_xref="GeneID:1024825"
CDS complement(1633380..1634417)
/locus_tag="SF1608"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="NP_707485.1"
/db_xref="GeneID:1024825"
/translation="MTDINHDNTVYPSSSFSGSPYRYQQVYTSSPDTRLTQINLLSVA
KPQLVRRANGRYTIRFRLKGQTTPFLSVSTRSTDRRVATMRQRELAATAKAFMLDRPE
VSLQELTEHLRSMAEQFLTDASDDYWNGLEVATLVDEKSNLKELAATQALSLDQQKGI
RLALEVLTAAQQRVDTGDTSGLIKLIDDNNLTDDSTIGDSTSILNNEQGDRPAVFTQE
RQSSVVFSSLVSSLLAEKVQTLKTSSYKDLSSSLNTVSRFLPEDMDLMSRSGWLAVRD
SMLASEVRPSTINKLLTKAKMCLDYGLMNGQLEGRNPIERMKLTKDIDSKRRAFTDEE
LERLLVRVESE"
misc_feature complement(<1633401..1633700)
/locus_tag="SF1608"
/note="Site-specific recombinase XerD [Replication,
recombination and repair]; Region: XerD; COG4974"
/db_xref="CDD:443999"
gene 1634343..1635509
/locus_tag="SF1607"
/db_xref="GeneID:1024785"
CDS 1634343..1635509
/locus_tag="SF1607"
/codon_start=1
/transl_table=11
/product="anaerobic dimethyl sulfoxide reductase subunit
A"
/protein_id="NP_707486.1"
/db_xref="GeneID:1024785"
/translation="MLIPIGRPRERTGWIYSVIMINVSHIRTLSSIESTTSSPSIRLA
MESIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLEDLMT
VEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGPDVYQKFTEGRT
QEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGHFVAYKAFRDDPEANPLKTP
SGKIEIYSSKLAEIARTWELEKDEVISPLPVYASTFEGWDSPERRTFPLQLFGFHYKS
RTHSTYGNIDVLKAACRQEVWINPIDAQKRGIANGDMVRVFNHRGEVRLPAKVTPRIL
PGVSAMGQGAWHEPNMSGDKIDHGGCVNTLTTLRPSPLAKGNPQHTNLVEIEKI"
misc_feature <1634484..1635506
/locus_tag="SF1607"
/note="anaerobic dimethyl sulfoxide reductase, A subunit,
DmsA/YnfE family; Region: dmsA_ynfE; TIGR02166"
/db_xref="CDD:274006"
gene 1635567..1637608
/locus_tag="SF1609"
/pseudo
/db_xref="GeneID:1024820"
misc_feature 1635567..1637608
/locus_tag="SF1609"
/note="'Similar to Escherichia coli K12 oxidoreductase,
major subunit gi: 1787871 (809 aa). BLAST with identity of
98% in 681 aa. This CDS contains deletion. The sequence
has been checked and is believed to be correct.'"
/pseudo
gene 1637619..1638236
/locus_tag="SF1610"
/db_xref="GeneID:1024815"
CDS 1637619..1638236
/locus_tag="SF1610"
/note="Code: C; COG: COG0437"
/codon_start=1
/transl_table=11
/product="oxidoreductase, Fe-S subunit"
/protein_id="NP_707487.1"
/db_xref="GeneID:1024815"
/translation="MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAG
CDWQEDNGIWHQNVFAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
RYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQ
KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV"
misc_feature 1637628..1638107
/locus_tag="SF1610"
/note="DMSO reductase, iron-sulfur subunit; Region:
DMSO_dmsB; TIGR02951"
/db_xref="CDD:131996"
gene 1638238..1639092
/locus_tag="SF1611"
/db_xref="GeneID:1024791"
CDS 1638238..1639092
/locus_tag="SF1611"
/note="Code: R; COG: COG3302"
/codon_start=1
/transl_table=11
/product="DMSO reductase anchor subunit"
/protein_id="NP_707488.2"
/db_xref="GeneID:1024791"
/translation="MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQHIV
RGMFFLWLLMGIGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWL
VAVIGKMPQALGKLWLLVSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLS
GPILAAAILRAARVTFNTTPFAIISVLALIACAEVIVLQGLSLASIHSSVQQASALVP
DYASLQVWRVVLLCAGLGCWLCPLIRRREPHVAGLVLGLILILVGEMIGRVLFYGLHM
TVGMAIAG"
misc_feature 1638238..1639059
/locus_tag="SF1611"
/note="DMSO reductase anchor subunit (DmsC); Region: DmsC;
pfam04976"
/db_xref="CDD:398575"
gene 1639135..1639749
/locus_tag="SF1612"
/db_xref="GeneID:1024778"
CDS 1639135..1639749
/locus_tag="SF1612"
/note="Code: R; COG: COG3381"
/codon_start=1
/transl_table=11
/product="twin-argninine leader-binding protein DmsD"
/protein_id="NP_707489.2"
/db_xref="GeneID:1024778"
/translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
TLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
RFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR"
misc_feature 1639135..1639746
/locus_tag="SF1612"
/note="Tat proofreading chaperone DmsD; Region: PRK11621"
/db_xref="CDD:236938"
gene 1639884..1641200
/locus_tag="SF1613"
/db_xref="GeneID:1024819"
CDS 1639884..1641200
/locus_tag="SF1613"
/note="Code: P; COG: COG0038"
/codon_start=1
/transl_table=11
/product="chloride channel protein"
/protein_id="NP_707490.3"
/db_xref="GeneID:1024819"
/translation="MFHCPFLLMHHLHIYPDLRTMFRRLLIATVVGILAVFAVAGFRH
AMLLLEWLFLNNDSGSLVNAATNLSSWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAP
TDYMEALQTDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTP
RQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAIVAWLVSN
LINHSDALLYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAP
PWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSG
SGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMATLLAATTHAPIM
STLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
misc_feature 1639944..1641197
/locus_tag="SF1613"
/note="putative voltage-gated ClC-type chloride channel
ClcB; Provisional; Region: PRK01610"
/db_xref="CDD:234963"
misc_feature order(1640193..1640207,1640295..1640309,1640901..1640915)
/locus_tag="SF1613"
/note="Cl- selectivity filter [active]"
/db_xref="CDD:238233"
misc_feature order(1640196..1640198,1640202..1640204,1640301..1640306,
1640901..1640909)
/locus_tag="SF1613"
/note="Cl- binding residues [ion binding]; other site"
/db_xref="CDD:238233"
misc_feature 1640301..1640303
/locus_tag="SF1613"
/note="pore gating glutamate residue [active]"
/db_xref="CDD:238233"
misc_feature order(1640433..1640435,1640460..1640462,1640505..1640507,
1640526..1640528,1641045..1641047,1641054..1641056,
1641078..1641080,1641102..1641104,1641123..1641128)
/locus_tag="SF1613"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238233"
gene complement(1641153..1641848)
/gene="bioD"
/locus_tag="SF1614"
/db_xref="GeneID:1024805"
CDS complement(1641153..1641848)
/gene="bioD"
/locus_tag="SF1614"
/note="Code: H; COG: COG0132"
/codon_start=1
/transl_table=11
/product="dithiobiotin synthetase"
/protein_id="NP_707491.2"
/db_xref="GeneID:1024805"
/translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKRVAGYKPVAKGS
KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
TDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
MLRSVLAVDRVTV"
misc_feature complement(1641195..1641842)
/gene="bioD"
/locus_tag="SF1614"
/note="Dethiobiotin synthetase [Coenzyme transport and
metabolism]; Region: BioD; COG0132"
/db_xref="CDD:439902"
gene complement(1641973..1643193)
/gene="mlc"
/locus_tag="SF1615"
/db_xref="GeneID:1024810"
CDS complement(1641973..1643193)
/gene="mlc"
/locus_tag="SF1615"
/note="Code: K; COG: COG1940"
/codon_start=1
/transl_table=11
/product="NagC-like transcriptional regulator"
/protein_id="NP_707492.1"
/db_xref="GeneID:1024810"
/translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
ASITKIVREMLEAHLVRELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
DLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
VIDHNVGVGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILE
LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIIIGVGAHVGRILAIMVNLFN
PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKD
AMYNGSLLIRLLQG"
misc_feature complement(1643014..1643136)
/gene="mlc"
/locus_tag="SF1615"
/note="helix_turn_helix, cAMP Regulatory protein
C-terminus; DNA binding domain of prokaryotic regulatory
proteins belonging to the catabolite activator protein
family; Region: HTH_CRP; cl46859"
/db_xref="CDD:481199"
misc_feature complement(1641976..1642944)
/gene="mlc"
/locus_tag="SF1615"
/note="ATPase-like domain of protein Mlc and similar
proteins; Region: ASKHA_ATPase_ROK_Mlc; cd24074"
/db_xref="CDD:466924"
gene complement(1643328..1644230)
/gene="ynfL"
/locus_tag="SF1616"
/db_xref="GeneID:1024818"
CDS complement(1643328..1644230)
/gene="ynfL"
/locus_tag="SF1616"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_707493.1"
/db_xref="GeneID:1024818"
/translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
APFIRAVSDTLSLFRRDYPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
AVIVHEPLMAMIPYDHPLANNPSVTLAELAELAKEPFVFFDPHVGTGLYDDILGLMRR
YHLTPVITQEVGEAMTIIGLVSAGLGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWL
VWPKHHEQSPAARNFRIHLLNALR"
misc_feature complement(1644039..1644218)
/gene="ynfL"
/locus_tag="SF1616"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:459683"
misc_feature complement(1643355..1643951)
/gene="ynfL"
/locus_tag="SF1616"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulators involved in the
catabolism of aromatic compounds and that of other related
regulators, contains type 2 periplasmic binding fold;
Region: PBP2_LTTR_aromatics_like; cd08414"
/db_xref="CDD:176106"
misc_feature complement(order(1643454..1643456,1643508..1643513,
1643517..1643522,1643538..1643543,1643598..1643603,
1643712..1643714,1643844..1643846,1643850..1643852,
1643856..1643858,1643880..1643882,1643889..1643894,
1643898..1643903,1643910..1643912,1643934..1643936))
/gene="ynfL"
/locus_tag="SF1616"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176106"
misc_feature complement(order(1643607..1643609,1643628..1643633,
1643781..1643783,1643931..1643933))
/gene="ynfL"
/locus_tag="SF1616"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:176106"
gene 1644337..1645590
/gene="ynfM"
/locus_tag="SF1617"
/pseudo
/db_xref="GeneID:1024817"
misc_feature 1644337..1645590
/gene="ynfM"
/locus_tag="SF1617"
/note="Similar to Escherichia coli K12 transport protein
gi: 1787880 (418 aa). BLAST with identity of 98% in 418
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene 1645987..1646322
/gene="asr"
/locus_tag="SF1618"
/db_xref="GeneID:1024808"
CDS 1645987..1646322
/gene="asr"
/locus_tag="SF1618"
/codon_start=1
/transl_table=11
/product="acid shock protein"
/protein_id="NP_707494.3"
/db_xref="GeneID:1024808"
/translation="MKKQIEGMTMKKVLALVVAAAMGLSSAAFAAETATTPAPTATTT
KAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGKHGHQQP
AKPAAQPAA"
misc_feature 1646014..1646283
/gene="asr"
/locus_tag="SF1618"
/note="acid shock protein; Region: PRK03577"
/db_xref="CDD:235132"
gene 1646598..1647419
/locus_tag="SF1619"
/db_xref="GeneID:1024802"
CDS 1646598..1647419
/locus_tag="SF1619"
/note="Code: E; COG: COG3591"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707495.1"
/db_xref="GeneID:1024802"
/translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
VPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRF
VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
LPLFEGDKAALTAALKSAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
LPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
misc_feature 1646766..1647413
/locus_tag="SF1619"
/note="V8-like Glu-specific endopeptidase
[Posttranslational modification, protein turnover,
chaperones]; Region: eMpr; COG3591"
/db_xref="CDD:442810"
gene complement(1647458..1647787)
/locus_tag="SF1620"
/db_xref="GeneID:1024848"
CDS complement(1647458..1647787)
/locus_tag="SF1620"
/note="Code: P; COG: COG2076"
/codon_start=1
/transl_table=11
/product="multidrug efflux system protein MdtI"
/protein_id="NP_707496.1"
/db_xref="GeneID:1024848"
/translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
VLAAFSALSQAVKGIDLSVVYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
MIMVKLA"
misc_feature complement(1647461..1647787)
/locus_tag="SF1620"
/note="multidrug/spermidine efflux SMR transporter subunit
MdtI; Region: PRK10650"
/db_xref="CDD:182618"
gene complement(1647774..1648139)
/locus_tag="SF1621"
/db_xref="GeneID:1024804"
CDS complement(1647774..1648139)
/locus_tag="SF1621"
/note="Code: P; COG: COG2076"
/codon_start=1
/transl_table=11
/product="multidrug efflux system protein MdtJ"
/protein_id="NP_707497.1"
/db_xref="GeneID:1024804"
/translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI
KSGTRKARKPELEVNHGAV"
misc_feature complement(1647777..1648136)
/locus_tag="SF1621"
/note="multidrug/spermidine efflux SMR transporter subunit
MdtJ; Region: PRK10452"
/db_xref="CDD:182471"
gene 1648550..1649584
/gene="tqsA"
/locus_tag="SF1622"
/db_xref="GeneID:1023378"
CDS 1648550..1649584
/gene="tqsA"
/locus_tag="SF1622"
/note="Code: R; COG: COG0628"
/codon_start=1
/transl_table=11
/product="pheromone autoinducer 2 transporter"
/protein_id="NP_707498.1"
/db_xref="GeneID:1023378"
/translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA
VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM
TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLF
MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL
DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG
NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI
AVLLSDLNKE"
misc_feature 1648550..1649581
/gene="tqsA"
/locus_tag="SF1622"
/note="pheromone autoinducer 2 transporter; Reviewed;
Region: tqsA; PRK12287"
/db_xref="CDD:183405"
gene complement(1649609..1650997)
/gene="pntB"
/locus_tag="SF1623"
/db_xref="GeneID:1026430"
CDS complement(1649609..1650997)
/gene="pntB"
/locus_tag="SF1623"
/note="Code: C; COG: COG1282"
/codon_start=1
/transl_table=11
/product="pyridine nucleotide transhydrogenase"
/protein_id="NP_707499.1"
/db_xref="GeneID:1026430"
/translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
TVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
AKASVDAILKAL"
misc_feature complement(1649612..1650997)
/gene="pntB"
/locus_tag="SF1623"
/note="Re/Si-specific NAD(P)(+) transhydrogenase subunit
beta; Region: pntB; PRK09444"
/db_xref="CDD:236520"
gene complement(1651008..1652555)
/gene="pntA"
/locus_tag="SF1624"
/db_xref="GeneID:1024826"
CDS complement(1651008..1652555)
/gene="pntA"
/locus_tag="SF1624"
/note="Code: C; COG: COG3288"
/codon_start=1
/transl_table=11
/product="NAD(P) transhydrogenase subunit alpha"
/protein_id="NP_707500.2"
/db_xref="GeneID:1024826"
/translation="MEGNIMRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGA
GQLASFDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQ
NPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTG
QITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLE
LDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREM
VDSMKAGSVIVDLAAQNGGNCEYIVPGEIFSTENGVKVIGYTDLPGRLPTQSSQLYGT
NLVNLLKLLCKEKDGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQAAQKAAP
EVKTEEKCACSPWRKYALMALAIILFGWLSSVAPKEFLGHFTVFALACVVGYYVVWNV
SHALHTPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRM
LKMFRKN"
misc_feature complement(1651014..1652540)
/gene="pntA"
/locus_tag="SF1624"
/note="Re/Si-specific NAD(P)(+) transhydrogenase subunit
alpha; Region: pntA; PRK09424"
/db_xref="CDD:236507"
gene 1653064..1654008
/locus_tag="SF1625"
/db_xref="GeneID:1024827"
CDS 1653064..1654008
/locus_tag="SF1625"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707501.1"
/db_xref="GeneID:1024827"
/translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR
VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA
NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
VSYQVAKRAAKKGAKYYHITRQWQKRGNNLTVSADLYK"
misc_feature 1653064..1654005
/locus_tag="SF1625"
/note="DUF1471 family protein YdgH; Region: ydgH_STM1478;
NF040471"
/db_xref="CDD:439699"
gene 1654194..1655576
/locus_tag="SF1626"
/db_xref="GeneID:1024796"
CDS 1654194..1655576
/locus_tag="SF1626"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="arginine/ornithine antiporter"
/protein_id="NP_707502.1"
/db_xref="GeneID:1024796"
/translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAV
VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
MGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
SVPATWMLVG"
misc_feature 1654200..1655573
/locus_tag="SF1626"
/note="transporter, basic amino acid/polyamine antiporter
(APA) family; Region: 2A0302; TIGR00905"
/db_xref="CDD:129983"
gene 1655613..1656335
/gene="ydgB"
/locus_tag="SF1627"
/db_xref="GeneID:1024813"
CDS 1655613..1656335
/gene="ydgB"
/locus_tag="SF1627"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="dihydromonapterin reductase"
/protein_id="NP_707503.1"
/db_xref="GeneID:1024813"
/translation="MGKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
DGLINAGAQCIQADFSTNDGVMAFADEVLKTTHGLRAILHNASAWIAEKPGAPLADVL
ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHVAYAASKAALD
NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
YLLTSCFVTGRSFPLDGGRHLR"
misc_feature 1655625..1656332
/gene="ydgB"
/locus_tag="SF1627"
/note="dihydromonapterin reductase; Provisional; Region:
PRK06483"
/db_xref="CDD:180586"
misc_feature order(1655649..1655651,1655658..1655666,1655718..1655732,
1655781..1655789,1655865..1655876,1655922..1655924,
1655934..1655936,1656021..1656029,1656066..1656068,
1656078..1656080,1656153..1656167)
/gene="ydgB"
/locus_tag="SF1627"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187615"
misc_feature order(1655661..1655663,1655871..1655873,1655877..1655879,
1655883..1655885,1656027..1656029,1656057..1656059,
1656066..1656068,1656156..1656161,1656168..1656173)
/gene="ydgB"
/locus_tag="SF1627"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:187615"
misc_feature order(1655937..1655939,1656027..1656029,1656066..1656068,
1656078..1656080)
/gene="ydgB"
/locus_tag="SF1627"
/note="active site"
/db_xref="CDD:187615"
gene complement(1656332..1656667)
/gene="ydgC"
/locus_tag="SF1628"
/db_xref="GeneID:1024842"
CDS complement(1656332..1656667)
/gene="ydgC"
/locus_tag="SF1628"
/note="Code: R; COG: COG3136"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707504.1"
/db_xref="GeneID:1024842"
/translation="MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHY
IVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWV
LIICWIKLH"
misc_feature complement(1656335..1656667)
/gene="ydgC"
/locus_tag="SF1628"
/note="Dual-topology membrane protein YdgC, GlpM family
[Function unknown]; Region: GlpM; COG3136"
/db_xref="CDD:442370"
gene 1656796..1657539
/gene="rstA"
/locus_tag="SF1629"
/db_xref="GeneID:1024809"
CDS 1656796..1657539
/gene="rstA"
/locus_tag="SF1629"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator RstA"
/protein_id="NP_707505.2"
/db_xref="GeneID:1024809"
/translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE
NPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT
TPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEI
SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAA
EPYRIKTVRNKGYLFAPHAWDSDNKQSDD"
misc_feature 1656796..1657515
/gene="rstA"
/locus_tag="SF1629"
/note="DNA-binding transcriptional regulator RstA;
Provisional; Region: PRK10701"
/db_xref="CDD:236738"
gene 1657764..1659083
/locus_tag="SF1631"
/db_xref="GeneID:1024816"
CDS 1657764..1659083
/locus_tag="SF1631"
/note="Code: R; COG: COG1823"
/codon_start=1
/transl_table=11
/product="L-cystine transporter TcyP"
/protein_id="NP_707507.2"
/db_xref="GeneID:1024816"
/translation="MLFLICSWGIFKTDQKSESLSKSVFIAIFLGAIIGISLHFIPET
SSETVIEWYNIAGNGYVNLLKLVAVPLIFISILSAINKLENSAGIGKMSLTIVACMLC
LVMIAGLVGLAIASAIGLDASAFGHMQSSLTSDDVSKTAAVSLPRLITSLIPTNLFLD
LTGARSVSVIGIVIFTILAGIALLKVKKDAPAEGEKLSAGINAIQIWVMKMVRIVIAL
TPYGVMALMAKVFSTYQLSQFTNLLGFIVACYLAVFVMFIVHSGILLLIGKNPVNYYK
TVWQVLTFAFVSRSSAASIPLAISALEKLGVPNTIANIAASFGSSMGQNGCAGIYPAV
MVAMIAPTMGIDPFSLQFLATLLPAIALGSIGVAGVGSGGTFAALIVLSTLNFPVALV
VIFIAIEPIVDMARTALNVNGSIMSGVISARLLKDRETKEQQSVTLN"
misc_feature 1657767..1659044
/locus_tag="SF1631"
/note="L-cystine transporter TcyP, sodium:dicarboxylate
symporter family [Amino acid transport and metabolism];
Region: TcyP; cl46791"
/db_xref="CDD:481131"
gene 1659262..1660563
/gene="rstB"
/locus_tag="SF1632"
/db_xref="GeneID:1024811"
CDS 1659262..1660563
/gene="rstB"
/locus_tag="SF1632"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="sensor protein RstB"
/protein_id="NP_707508.2"
/db_xref="GeneID:1024811"
/translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN
SSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVA
LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPH
WQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDG
IAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELH
LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLMQGHYAALDMRLMERVLDNLLNNALRY
CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA
IVHSIALTMGGTVNCDISELGGARFSFSWPLWHNIPQFTSA"
misc_feature 1659262..1660560
/gene="rstB"
/locus_tag="SF1632"
/note="sensor protein RstB; Provisional; Region: PRK10604"
/db_xref="CDD:236724"
gene 1660639..1661568
/gene="tus"
/locus_tag="SF1633"
/db_xref="GeneID:1024823"
CDS 1660639..1661568
/gene="tus"
/locus_tag="SF1633"
/codon_start=1
/transl_table=11
/product="DNA replication terminus site-binding protein"
/protein_id="NP_707509.2"
/db_xref="GeneID:1024823"
/translation="MARYDLVDRLNTTFRQMEQELATFAAHLEQHKLLVARVFSLPEV
KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLT
VLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE
LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
misc_feature 1660639..1661565
/gene="tus"
/locus_tag="SF1633"
/note="DNA replication terminus site-binding protein;
Provisional; Region: PRK02951"
/db_xref="CDD:235090"
gene complement(1661565..1662968)
/gene="fumC"
/locus_tag="SF1634"
/db_xref="GeneID:1027791"
CDS complement(1661565..1662968)
/gene="fumC"
/locus_tag="SF1634"
/note="Code: C; COG: COG0114"
/codon_start=1
/transl_table=11
/product="fumarate hydratase"
/protein_id="NP_707510.1"
/db_xref="GeneID:1027791"
/translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
IHALALTKRAAAKVNEDLDLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
IPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE
PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
DSWVRPEQMVGSMKAGR"
misc_feature complement(1661577..1662968)
/gene="fumC"
/locus_tag="SF1634"
/note="fumarate hydratase; Reviewed; Region: fumC;
PRK00485"
/db_xref="CDD:234779"
misc_feature complement(order(1661976..1661978,1661991..1661993,
1661997..1661999,1662405..1662407,1662546..1662554,
1662573..1662584,1662591..1662593,1662669..1662671,
1662675..1662677))
/gene="fumC"
/locus_tag="SF1634"
/note="active site"
/db_xref="CDD:176465"
misc_feature complement(order(1661739..1661741,1661898..1661906,
1661913..1661915,1661937..1661939,1662087..1662092,
1662099..1662104,1662108..1662113,1662120..1662125,
1662132..1662134,1662141..1662146,1662153..1662155,
1662159..1662164,1662171..1662173,1662180..1662185,
1662273..1662275,1662327..1662329,1662339..1662341,
1662351..1662353,1662369..1662374,1662390..1662392,
1662402..1662413))
/gene="fumC"
/locus_tag="SF1634"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176465"
gene complement(1663111..1664757)
/gene="fumA"
/locus_tag="SF1635"
/db_xref="GeneID:1024833"
CDS complement(1663111..1664757)
/gene="fumA"
/locus_tag="SF1635"
/note="Code: C; COG: COG1951"
/codon_start=1
/transl_table=11
/product="fumarate hydratase FumA"
/protein_id="NP_707511.1"
/db_xref="GeneID:1024833"
/translation="MSNKPFHYQSPFPLKKNDTEYYLLTSEHVSVSEFEGQEILKVAP
EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
PTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL
LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
misc_feature complement(1663147..1664754)
/gene="fumA"
/locus_tag="SF1635"
/note="fumarate hydratase; Provisional; Region: PRK15389"
/db_xref="CDD:237955"
gene 1664956..1666131
/gene="manA"
/locus_tag="SF1636"
/db_xref="GeneID:1024799"
CDS 1664956..1666131
/gene="manA"
/locus_tag="SF1636"
/note="Code: G; COG: COG1482"
/codon_start=1
/transl_table=11
/product="mannose-6-phosphate isomerase"
/protein_id="NP_707512.2"
/db_xref="GeneID:1024799"
/translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
HNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
VAGAHPAIAHFLQQPHAERLSELFANLLNMQGEEKSRALAILKSALDSQQGEPWQTIR
LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
misc_feature 1664956..1666122
/gene="manA"
/locus_tag="SF1636"
/note="mannose-6-phosphate isomerase; Provisional; Region:
PRK15131"
/db_xref="CDD:185085"
misc_feature order(1664992..1664994,1665058..1665060,1665064..1665066,
1665211..1665213,1665235..1665240,1665244..1665246,
1665250..1665252,1665349..1665351,1665355..1665357,
1665361..1665363,1665718..1665720,1665724..1665726,
1665745..1665747,1665751..1665753,1665763..1665765,
1665775..1665777)
/gene="manA"
/locus_tag="SF1636"
/note="active site"
/db_xref="CDD:380414"
gene 1666232..1667740
/gene="ydgA"
/locus_tag="SF1637"
/db_xref="GeneID:1024801"
CDS 1666232..1667740
/gene="ydgA"
/locus_tag="SF1637"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707513.1"
/db_xref="GeneID:1024801"
/translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL
KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLN
PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
TDGSSTLGSFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY
QEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA
QEVDRSVKSLDAKLTIPVDMATELMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
LTTLQDNTITTSLQYANGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ"
misc_feature 1666232..1667674
/gene="ydgA"
/locus_tag="SF1637"
/note="Uncharacterized conserved protein YdgA, DUF945
family [Function unknown]; Region: YdgA; COG5339"
/db_xref="CDD:444123"
gene complement(1667966..1669232)
/locus_tag="SF1638"
/pseudogene="unknown"
/db_xref="GeneID:1024839"
gene complement(1669271..1670305)
/gene="uidB"
/locus_tag="SF1639"
/pseudo
/db_xref="GeneID:1024812"
misc_feature complement(1669271..1670305)
/gene="uidB"
/locus_tag="SF1639"
/note="Similar to Escherichia coli K12 glucuronide
permease gi: 1787902 (458 aa). BLAST with identity of 98%
in 344 aa. This CDS has been truncated. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(1670302..1672005)
/gene="uidA"
/locus_tag="SF1640"
/db_xref="GeneID:1024814"
CDS complement(1670302..1672005)
/gene="uidA"
/locus_tag="SF1640"
/note="Code: G; COG: COG3250"
/codon_start=1
/transl_table=11
/product="beta-D-glucuronidase"
/protein_id="NP_707515.1"
/db_xref="GeneID:1024814"
/translation="MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWCESALQESRA
IAVPGSFNDQFADADIRNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQ
EVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSY
FHDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDISVELRD
ADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAV
KGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA
EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAGNGETQQAHLQAI
KELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVD
TLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGN
N"
misc_feature complement(1670305..1672005)
/gene="uidA"
/locus_tag="SF1640"
/note="beta-D-glucuronidase; Provisional; Region:
PRK10150"
/db_xref="CDD:236657"
gene complement(1672393..1672983)
/gene="uidR"
/locus_tag="SF1641"
/db_xref="GeneID:1024844"
CDS complement(1672393..1672983)
/gene="uidR"
/locus_tag="SF1641"
/note="Code: K; COG: COG1309"
/codon_start=1
/transl_table=11
/product="uid operon repressor"
/protein_id="NP_707516.1"
/db_xref="GeneID:1024844"
/translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS
PGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQR
ALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLL
DLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS"
misc_feature complement(1672522..1672968)
/gene="uidR"
/locus_tag="SF1641"
/note="DNA-binding protein, AcrR family, includes nucleoid
occlusion protein SlmA [Transcription]; Region: AcrR;
COG1309"
/db_xref="CDD:440920"
mobile_element complement(1673373..1674140)
/mobile_element_type="insertion sequence:IS1"
gene complement(1673388..1673783)
/gene="insB"
/locus_tag="SF1642"
/db_xref="GeneID:1024834"
CDS complement(1673388..1673783)
/gene="insB"
/locus_tag="SF1642"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707517.1"
/db_xref="GeneID:1024834"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1673391..1673780)
/gene="insB"
/locus_tag="SF1642"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1673810..1674085)
/gene="insA"
/locus_tag="SF1643"
/db_xref="GeneID:1024843"
CDS complement(1673810..1674085)
/gene="insA"
/locus_tag="SF1643"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707518.1"
/db_xref="GeneID:1024843"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1673813..1674064)
/gene="insA"
/locus_tag="SF1643"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(1674136..1674756)
/locus_tag="SF1644"
/db_xref="GeneID:1024838"
CDS complement(1674136..1674756)
/locus_tag="SF1644"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="2-deoxy-D-gluconate 3-dehydrogenase"
/protein_id="NP_707519.1"
/db_xref="GeneID:1024838"
/translation="MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN
ADAANHVVDEIQQLDGQAFAWRCDITSEQELSALADFAVSNLGKVDILVNNAGGGGPK
PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA
SSKAAASHLVRNMAFDLGEKNIRVNSIAPGAILTDALKSVITPEIG"
misc_feature complement(1674142..1674756)
/locus_tag="SF1644"
/note="A large family of proteins that share a
Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
NADB domain is found in numerous dehydrogenases of
metabolic pathways such as glycolysis, and many other
redox enzymes. NAD binding involves numerous...; Region:
Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
/db_xref="CDD:473865"
misc_feature complement(order(1674181..1674192,1674268..1674270,
1674280..1674282,1674319..1674327,1674466..1674474,
1674625..1674633,1674688..1674690,1674694..1674699,
1674703..1674705))
/locus_tag="SF1644"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(1674268..1674270,1674280..1674282,
1674319..1674321,1674403..1674405))
/locus_tag="SF1644"
/note="active site"
/db_xref="CDD:187535"
gene complement(1674868..1675896)
/gene="malI"
/locus_tag="SF1646"
/db_xref="GeneID:1024855"
CDS complement(1674868..1675896)
/gene="malI"
/locus_tag="SF1646"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor MalI"
/protein_id="NP_707520.1"
/db_xref="GeneID:1024855"
/translation="MATAKKITIHDVALAAGVSVSTVSLVLNGKGRISTATGERVNAA
IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD
TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD
WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR
YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGITLADRMMQKITHEETHSRNLII
PARLIAAK"
misc_feature complement(1674871..1675896)
/gene="malI"
/locus_tag="SF1646"
/note="DNA-binding transcriptional repressor MalI;
Provisional; Region: PRK10014"
/db_xref="CDD:182193"
gene 1676071..1677663
/gene="malX"
/locus_tag="SF1645"
/db_xref="GeneID:1026438"
CDS 1676071..1677663
/gene="malX"
/locus_tag="SF1645"
/note="Code: G; COG: COG1263"
/codon_start=1
/transl_table=11
/product="bifunctional PTS system maltose and
glucose-specific transporter subunits IICB"
/protein_id="NP_707521.2"
/db_xref="GeneID:1026438"
/translation="MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS
HDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF
VGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM
LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVILLVWPIFAMGISGLGHMINS
AGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSC
PTTHGFSESVTRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGLIACVV
GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHG
LSTKWYMVPVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAGAPGKSGY
NVPAILEALGGADNIVSLDNCITRLRLSVEDMSLVNVQALKDNRAIGVVQLNQHNLQV
VIGPQVQSVKDEMAGLMHTVQA"
misc_feature 1676071..1677660
/gene="malX"
/locus_tag="SF1645"
/note="PTS maltose transporter subunit IICB; Region:
PRK10110"
/db_xref="CDD:182245"
gene 1677673..1678845
/gene="malY"
/locus_tag="SF1647"
/db_xref="GeneID:1024837"
CDS 1677673..1678845
/gene="malY"
/locus_tag="SF1647"
/note="Code: E; COG: COG1168"
/codon_start=1
/transl_table=11
/product="cystathionine beta-lyase"
/protein_id="NP_707522.1"
/db_xref="GeneID:1024837"
/translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDTQTVVYGPSVIYMVSE
LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK
PECKIMLLCNPQNPTGKVWTCDELEIMADLCERHDVRVISDEIHMDMVWGEQPHIPWS
NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
HIAAYQQGAPWLDALRVYLKDNLTYISDKMNAAFPELNWQIPQSTYLAWLDLRPLNID
DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
misc_feature 1677673..1678830
/gene="malY"
/locus_tag="SF1647"
/note="Bifunctional PLP-dependent enzyme with
beta-cystathionase and maltose regulon repressor
activities [Amino acid transport and metabolism, General
function prediction only]; Region: MalY; COG1168"
/db_xref="CDD:440782"
gene 1678949..1679950
/gene="add"
/locus_tag="SF1648"
/db_xref="GeneID:1024851"
CDS 1678949..1679950
/gene="add"
/locus_tag="SF1648"
/note="Code: F; COG: COG1816"
/codon_start=1
/transl_table=11
/product="adenosine deaminase"
/protein_id="NP_707523.1"
/db_xref="GeneID:1024851"
/translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI
PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLRYVELRFSPG
YMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
DQITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAER
IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRASIN
TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
misc_feature 1678967..1679947
/gene="add"
/locus_tag="SF1648"
/note="Adenosine deaminase; Region: A_deaminase;
pfam00962"
/db_xref="CDD:425964"
misc_feature order(1678982..1678984,1678988..1678990,1679537..1679539,
1679546..1679548,1679609..1679611,1679780..1679785)
/gene="add"
/locus_tag="SF1648"
/note="active site"
/db_xref="CDD:238645"
misc_feature order(1678988..1678990,1678994..1678996,1679456..1679458,
1679546..1679548,1679780..1679785)
/gene="add"
/locus_tag="SF1648"
/note="purine riboside binding site [chemical binding];
other site"
/db_xref="CDD:238645"
gene complement(1679986..1681065)
/locus_tag="SF1649"
/db_xref="GeneID:1024845"
CDS complement(1679986..1681065)
/locus_tag="SF1649"
/note="Code: R; COG: COG0673"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707524.3"
/db_xref="GeneID:1024845"
/translation="MSNSHHTSMRGNDMSDNIRVGLIGYGYASKTFHAPLIAGTPGLE
LAVISSSDETKVKADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGK
HVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAY
FESHFDRFRPQVRDRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPG
AQSTDYFHAILSYPQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGE
RLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPAS
QAIQVMELIELGIESAKHRATLCLA"
misc_feature complement(1679989..1681026)
/locus_tag="SF1649"
/note="putative oxidoreductase; Provisional; Region:
PRK11579"
/db_xref="CDD:183212"
gene 1681194..1681394
/locus_tag="SF1649a"
/db_xref="GeneID:16608329"
CDS 1681194..1681394
/locus_tag="SF1649a"
/codon_start=1
/transl_table=11
/product="beta-lactam resistance family protein"
/protein_id="YP_008439252.1"
/db_xref="GeneID:16608329"
/translation="MLELLLLSNIYPLKLMDQSREMWAVMNRLIELTGWIVLVVSVIL
LGVASHIDNYQPPEQSASVQHK"
misc_feature 1681272..1681391
/locus_tag="SF1649a"
/note="division septum protein Blr; Region: small_Blr;
NF033231"
/db_xref="CDD:380226"
gene 1681667..1681882
/locus_tag="SF1650"
/db_xref="GeneID:1023375"
CDS 1681667..1681882
/locus_tag="SF1650"
/codon_start=1
/transl_table=11
/product="oriC-binding nucleoid-associated protein"
/protein_id="NP_707525.1"
/db_xref="GeneID:1023375"
/translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
HRRAELVSGGRLFDLGQVPKSVWHYVQ"
misc_feature 1681667..1681879
/locus_tag="SF1650"
/note="transcription modulator YdgT; Region: PRK10391"
/db_xref="CDD:182426"
gene 1681968..1682408
/locus_tag="SF1651"
/db_xref="GeneID:1024835"
CDS 1681968..1682408
/locus_tag="SF1651"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707526.2"
/db_xref="GeneID:1024835"
/translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
KAFAFSPVEVGIAVRQLLFTLLATALIVPYFKRSSRVKATFVNP"
misc_feature 1681983..1682399
/locus_tag="SF1651"
/note="Protein of unknown function (DUF2569); Region:
DUF2569; pfam10754"
/db_xref="CDD:431473"
gene 1682485..1683066
/locus_tag="SF1652"
/db_xref="GeneID:1024850"
CDS 1682485..1683066
/locus_tag="SF1652"
/note="Code: C; COG: COG2209"
/codon_start=1
/transl_table=11
/product="electron transport complex protein RsxA"
/protein_id="NP_707527.1"
/db_xref="GeneID:1024850"
/translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
TTFVMTLTSICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAV
ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
misc_feature 1682485..1683063
/locus_tag="SF1652"
/note="electron transport complex protein RsxA;
Provisional; Region: PRK05151"
/db_xref="CDD:235352"
gene 1683066..1683644
/locus_tag="SF1653"
/db_xref="GeneID:1024854"
CDS 1683066..1683644
/locus_tag="SF1653"
/note="Code: C; COG: COG2878"
/codon_start=1
/transl_table=11
/product="electron transport complex protein RnfB"
/protein_id="NP_707528.1"
/db_xref="GeneID:1024854"
/translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL
PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRVMHTVMSDLCTGCNLCVDPCPTH
CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
misc_feature 1683066..1683641
/locus_tag="SF1653"
/note="electron transport complex protein RnfB;
Provisional; Region: PRK05113"
/db_xref="CDD:235347"
gene 1683637..1685859
/locus_tag="SF1654"
/db_xref="GeneID:1024831"
CDS 1683637..1685859
/locus_tag="SF1654"
/note="Code: C; COG: COG1726"
/codon_start=1
/transl_table=11
/product="electron transport complex protein RnfC"
/protein_id="NP_707529.1"
/db_xref="GeneID:1024831"
/translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQTNGTPLRQVLLAQHFV
IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA
LAELSVIIDADGEDCWIPRDGWVDYRSRSREELIERIHQFGVAGLGGAGFPTGVKLQG
GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP
QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQM
VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPVDLL
PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
KRAAEAKARFEARQARLEREKATRLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
QPIVIKAGERPDNSAIIAEREARKAQARAKQAELEQTNDAATVAEPRKTAVEAAIARS
KARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVE
AAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDP
RKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVAAAIARVQAKKAAQQKVVNED
"
misc_feature 1683655..1685688
/locus_tag="SF1654"
/note="electron transport complex protein RnfC;
Provisional; Region: PRK05035"
/db_xref="CDD:235334"
gene 1685860..1686918
/gene="rnfD"
/locus_tag="SF1655"
/db_xref="GeneID:1024858"
CDS 1685860..1686918
/gene="rnfD"
/locus_tag="SF1655"
/note="Code: C; COG: COG1805"
/codon_start=1
/transl_table=11
/product="electron transport complex protein RnfD"
/protein_id="NP_707530.1"
/db_xref="GeneID:1024858"
/translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLRFFGWGTL
VQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ
VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA
GWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLS
GATMLGAFFILTDPVTASTTNRGRLMFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT
VPLIDYYTRPRVYGHRKG"
misc_feature 1685863..1686912
/gene="rnfD"
/locus_tag="SF1655"
/note="electron transport complex protein RnfD; Reviewed;
Region: rnfD; PRK00816"
/db_xref="CDD:234844"
gene 1686922..1687542
/locus_tag="SF1656"
/db_xref="GeneID:1024821"
CDS 1686922..1687542
/locus_tag="SF1656"
/note="Code: C; COG: COG2869"
/codon_start=1
/transl_table=11
/product="electron transport complex protein RnfG"
/protein_id="NP_707531.1"
/db_xref="GeneID:1024821"
/translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKT
LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWLTHFAGKKISGADDAHWAV
KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
misc_feature 1686934..1687539
/locus_tag="SF1656"
/note="electron transport complex protein RnfG; Validated;
Region: PRK01908"
/db_xref="CDD:179350"
gene 1687546..1688241
/gene="ydgQ"
/locus_tag="SF1657"
/db_xref="GeneID:1024879"
CDS 1687546..1688241
/gene="ydgQ"
/locus_tag="SF1657"
/note="Code: C; COG: COG1347"
/codon_start=1
/transl_table=11
/product="electron transport complex protein RsxE"
/protein_id="NP_707532.1"
/db_xref="GeneID:1024879"
/translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGTGATCAMFVLGSLREIIGNGTLFDG
ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAA
AERALPNGETGNV"
misc_feature 1687546..1688181
/gene="ydgQ"
/locus_tag="SF1657"
/note="electron transport complex RsxE subunit;
Provisional; Region: PRK12405"
/db_xref="CDD:237091"
gene 1688241..1688876
/gene="nth"
/locus_tag="SF1658"
/db_xref="GeneID:1024830"
CDS 1688241..1688876
/gene="nth"
/locus_tag="SF1658"
/note="Code: L; COG: COG0177"
/codon_start=1
/transl_table=11
/product="endonuclease III"
/protein_id="NP_707533.1"
/db_xref="GeneID:1024830"
/translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
ISVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
misc_feature 1688241..1688873
/gene="nth"
/locus_tag="SF1658"
/note="endonuclease III; Provisional; Region: PRK10702"
/db_xref="CDD:182661"
gene 1689487..1690989
/gene="tppB"
/locus_tag="SF1659"
/db_xref="GeneID:1024841"
CDS 1689487..1690989
/gene="tppB"
/locus_tag="SF1659"
/note="Code: E; COG: COG3104"
/codon_start=1
/transl_table=11
/product="tripeptide transporter permease"
/protein_id="NP_707534.1"
/db_xref="GeneID:1024841"
/translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPVNY
RNLLLTIIGVVALIAVATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
LMSLEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQDDAADKAAKATVA"
misc_feature 1689487..1690947
/gene="tppB"
/locus_tag="SF1659"
/note="dipeptide/tripeptide permease DtpA; Region: tppB;
PRK09584"
/db_xref="CDD:181969"
misc_feature order(1689586..1689588,1689598..1689600,1689874..1689876,
1689952..1689954,1689961..1689966,1689973..1689975,
1690360..1690362,1690459..1690464,1690471..1690473,
1690672..1690674)
/gene="tppB"
/locus_tag="SF1659"
/note="chemical substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:340904"
gene 1691095..1691700
/gene="gst"
/locus_tag="SF1660"
/db_xref="GeneID:1024836"
CDS 1691095..1691700
/gene="gst"
/locus_tag="SF1660"
/note="Code: O; COG: COG0625"
/codon_start=1
/transl_table=11
/product="glutathionine S-transferase"
/protein_id="NP_707535.1"
/db_xref="GeneID:1024836"
/translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF
SVNHKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA
TELHKGFTPLFRPDTPEEYKPTVRAQLDKKLQYVNEALKDEHWICGQRFTIADAYLFT
VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK"
misc_feature 1691095..1691697
/gene="gst"
/locus_tag="SF1660"
/note="glutathionine S-transferase; Provisional; Region:
PRK10542"
/db_xref="CDD:182533"
gene complement(1691744..1692607)
/gene="pdxY"
/locus_tag="SF1661"
/db_xref="GeneID:1024828"
CDS complement(1691744..1692607)
/gene="pdxY"
/locus_tag="SF1661"
/note="Code: H; COG: COG2240"
/codon_start=1
/transl_table=11
/product="pyridoxamine kinase"
/protein_id="NP_707536.1"
/db_xref="GeneID:1024828"
/translation="MMKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNH
TQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKA
ANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNN
VEEAVLAARELIEQGPQIVLVKHLARAGYSRDRFEMLLVTADEVWHISRPLVDFGMRQ
PVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIA
KPEHYFSATKL"
misc_feature complement(1691747..1692604)
/gene="pdxY"
/locus_tag="SF1661"
/note="pyridoxal kinase PdxY; Region: PRK05756"
/db_xref="CDD:235592"
misc_feature complement(order(1692398..1692400,1692419..1692424,
1692443..1692445,1692449..1692454,1692479..1692481,
1692488..1692490,1692497..1692514,1692527..1692529,
1692536..1692538,1692548..1692550,1692560..1692562,
1692566..1692571,1692575..1692577,1692596..1692598))
/gene="pdxY"
/locus_tag="SF1661"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238578"
misc_feature complement(order(1691936..1691938,1691945..1691950,
1692353..1692355,1692359..1692361,1692458..1692460,
1692473..1692478,1692485..1692487,1692554..1692559,
1692578..1692580))
/gene="pdxY"
/locus_tag="SF1661"
/note="pyridoxal binding site [chemical binding]; other
site"
/db_xref="CDD:238578"
misc_feature complement(order(1691843..1691845,1691855..1691857,
1691930..1691932,1691936..1691944,1691951..1691953,
1691972..1691977,1691981..1691983,1692026..1692028,
1692059..1692064,1692161..1692163,1692170..1692172,
1692176..1692178,1692257..1692259,1692272..1692274))
/gene="pdxY"
/locus_tag="SF1661"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238578"
gene complement(1692714..1693988)
/gene="tyrS"
/locus_tag="SF1662"
/db_xref="GeneID:1024866"
CDS complement(1692714..1693988)
/gene="tyrS"
/locus_tag="SF1662"
/note="Code: J; COG: COG0162"
/codon_start=1
/transl_table=11
/product="tyrosyl-tRNA synthetase"
/protein_id="NP_707537.2"
/db_xref="GeneID:1024866"
/translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
LNREDEGMSITEFSYNLQQGYDWTCLNTHYYVELQIGGSDQRWNITSEIDLTRRLHQN
HVLGLPDPLITNGDGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
misc_feature complement(1692717..1693979)
/gene="tyrS"
/locus_tag="SF1662"
/note="Tyrosyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: TyrS; COG0162"
/db_xref="CDD:439932"
gene complement(1694117..1694773)
/gene="pdxH"
/locus_tag="SF1663"
/db_xref="GeneID:1024832"
CDS complement(1694117..1694773)
/gene="pdxH"
/locus_tag="SF1663"
/note="Code: H; COG: COG0259"
/codon_start=1
/transl_table=11
/product="pyridoxamine 5'-phosphate oxidase"
/protein_id="NP_707538.1"
/db_xref="GeneID:1024832"
/translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
AKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
"
misc_feature complement(1694120..1694704)
/gene="pdxH"
/locus_tag="SF1663"
/note="pyridoxal 5'-phosphate synthase; Region: PRK05679"
/db_xref="CDD:235555"
gene complement(1694832..1695080)
/gene="ydhA"
/locus_tag="SF1664"
/db_xref="GeneID:1024824"
CDS complement(1694832..1695080)
/gene="ydhA"
/locus_tag="SF1664"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707539.1"
/db_xref="GeneID:1024824"
/translation="MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGLSAS
GARYSDGIYVFWSKGEEATVYKRDRIVLNNCQLQNPQR"
misc_feature complement(1694835..>1695080)
/gene="ydhA"
/locus_tag="SF1664"
/note="C-type lysozyme inhibitor; Region: PRK11372;
cl01604"
/db_xref="CDD:470265"
mobile_element complement(1695091..1696421)
/mobile_element_type="insertion sequence:IS2"
gene complement(1695102..1696007)
/locus_tag="SF1665"
/db_xref="GeneID:1024869"
CDS complement(1695102..1696007)
/locus_tag="SF1665"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707540.1"
/db_xref="GeneID:1024869"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALFRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(1695105..1696007)
/locus_tag="SF1665"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(1695965..1696375)
/locus_tag="SF1666"
/db_xref="GeneID:1024829"
CDS complement(1695965..1696375)
/locus_tag="SF1666"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707541.1"
/db_xref="GeneID:1024829"
/translation="MIVLIPVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(1695968..1696330)
/locus_tag="SF1666"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene complement(1696595..1697704)
/gene="anmK"
/locus_tag="SF1667"
/db_xref="GeneID:1024861"
CDS complement(1696595..1697704)
/gene="anmK"
/locus_tag="SF1667"
/note="Code: S; COG: COG2377"
/codon_start=1
/transl_table=11
/product="anhydro-N-acetylmuramic acid kinase"
/protein_id="NP_707542.1"
/db_xref="GeneID:1024861"
/translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT
ERRMVLNIGGIANLSLLIPGQLVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
VILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
TISEQVLLSGGCERLMVCGGGSRNPLLMARLAVLLLGTEVTTTDAVGISGDDMEALAF
AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANS"
misc_feature complement(1696604..1697695)
/gene="anmK"
/locus_tag="SF1667"
/note="Anhydro-N-acetylmuramic acid kinase; Region: AnmK;
pfam03702"
/db_xref="CDD:397660"
gene 1697978..1698445
/gene="slyB"
/locus_tag="SF1668"
/db_xref="GeneID:1024859"
CDS 1697978..1698445
/gene="slyB"
/locus_tag="SF1668"
/note="Code: M; COG: COG3133"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707543.1"
/db_xref="GeneID:1024859"
/translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
misc_feature 1697978..1698442
/gene="slyB"
/locus_tag="SF1668"
/note="Outer membrane lipoprotein SlyB [Cell
wall/membrane/envelope biogenesis]; Region: SlyB; COG3133"
/db_xref="CDD:442367"
gene complement(1698492..1698932)
/gene="slyA"
/locus_tag="SF1669"
/db_xref="GeneID:1024872"
CDS complement(1698492..1698932)
/gene="slyA"
/locus_tag="SF1669"
/note="Code: K; COG: COG1846"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="NP_707544.3"
/db_xref="GeneID:1024872"
/translation="MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQ
LPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLI
SEMEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG"
misc_feature complement(1698495..1698926)
/gene="slyA"
/locus_tag="SF1669"
/note="transcriptional regulator SlyA; Provisional;
Region: PRK03573"
/db_xref="CDD:179596"
gene 1699127..1699363
/locus_tag="SF1670"
/db_xref="GeneID:1024877"
CDS 1699127..1699363
/locus_tag="SF1670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707545.1"
/db_xref="GeneID:1024877"
/translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
RGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW"
misc_feature 1699172..1699336
/locus_tag="SF1670"
/note="Protein of unknown function (DUF1656); Region:
DUF1656; pfam07869"
/db_xref="CDD:429704"
gene 1699357..1700223
/locus_tag="SF1671"
/db_xref="GeneID:1024873"
CDS 1699357..1700223
/locus_tag="SF1671"
/note="Code: Q; COG: COG1566"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707546.1"
/db_xref="GeneID:1024873"
/translation="MVTMSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQSPWTRDGKIR
AEQVSITPQVSGRIVELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKAQSDLA
KANNEANRRRHLSQNFIFAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAP
VSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSD
NKTLQGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQLVPVRFALDKVPGDVTL
VSGTTCSIAVGQ"
misc_feature 1699357..1700217
/locus_tag="SF1671"
/note="p-hydroxybenzoic acid efflux pump subunit AaeA;
Region: PRK10559"
/db_xref="CDD:182548"
gene 1700223..1702231
/locus_tag="SF1672"
/pseudo
/db_xref="GeneID:1026749"
misc_feature 1700223..1702231
/locus_tag="SF1672"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787933 (671 aa). BLAST with
identity of 98% in 670 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(1702236..1702772)
/gene="sodC"
/locus_tag="SF1673"
/db_xref="GeneID:1024862"
CDS complement(1702236..1702772)
/gene="sodC"
/locus_tag="SF1673"
/note="Code: P; COG: COG2032"
/codon_start=1
/transl_table=11
/product="superoxide dismutase"
/protein_id="NP_707547.2"
/db_xref="GeneID:1024862"
/translation="MNGGPMKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIG
SVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQN
TGKHEGPEGTGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSD
QPKPLGGGGERYACGVIK"
misc_feature complement(1702239..1702757)
/gene="sodC"
/locus_tag="SF1673"
/note="superoxide dismutase [Cu-Zn] SodC2; Region:
PRK10290"
/db_xref="CDD:182357"
misc_feature complement(order(1702407..1702409,1702605..1702607))
/gene="sodC"
/locus_tag="SF1673"
/note="P-class dimer interface [polypeptide binding];
other site"
/db_xref="CDD:238186"
misc_feature complement(order(1702317..1702319,1702422..1702424,
1702431..1702433,1702482..1702484,1702551..1702553,
1702557..1702559))
/gene="sodC"
/locus_tag="SF1673"
/note="active site"
/db_xref="CDD:238186"
misc_feature complement(order(1702317..1702319,1702482..1702484,
1702551..1702553,1702557..1702559))
/gene="sodC"
/locus_tag="SF1673"
/note="Cu2+ binding site [ion binding]; other site"
/db_xref="CDD:238186"
misc_feature complement(order(1702422..1702424,1702431..1702433,
1702455..1702457,1702482..1702484))
/gene="sodC"
/locus_tag="SF1673"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:238186"
gene complement(1702838..1703734)
/locus_tag="SF1674"
/db_xref="GeneID:1024860"
CDS complement(1702838..1703734)
/locus_tag="SF1674"
/note="Code: R; COG: COG0656"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707548.1"
/db_xref="GeneID:1024860"
/translation="MVQRITIAPEGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD
RNHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
NDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
TLKMTRQQWFRIRKAALGYDVP"
misc_feature complement(1702841..1703728)
/locus_tag="SF1674"
/note="Predicted oxidoreductase YdhF [General function
prediction only]; Region: YdhF; COG4989"
/db_xref="CDD:444013"
gene complement(1703783..1704160)
/locus_tag="SF1675"
/db_xref="GeneID:1024856"
CDS complement(1703783..1704160)
/locus_tag="SF1675"
/note="Code: R; COG: COG3313"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707549.2"
/db_xref="GeneID:1024856"
/translation="MFASIMFGVFVHALECSRPVGLVQAKLLLWTLTASIMVIILSEE
GEVAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSDGEKQEVLRLCRQ
RLMRKLRANKPASSDEPEQPSLF"
misc_feature complement(1703849..1703998)
/locus_tag="SF1675"
/note="Predicted Fe-S protein YdhL, DUF1289 family
[General function prediction only]; Region: YdhL; COG3313"
/db_xref="CDD:442542"
gene 1704125..1704724
/locus_tag="SF1676"
/db_xref="GeneID:1026444"
CDS 1704125..1704724
/locus_tag="SF1676"
/note="Code: K; COG: COG1309"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707550.2"
/db_xref="GeneID:1026444"
/translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS
FYHYFRSKEAFGVAMLERHYAAYHQRLAELLQSGEGNYRDRILAYYQQTLNQFCQHGT
ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA
QVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV"
misc_feature 1704146..1704631
/locus_tag="SF1676"
/note="DNA-binding protein, AcrR family, includes nucleoid
occlusion protein SlmA [Transcription]; Region: AcrR;
COG1309"
/db_xref="CDD:440920"
gene 1704761..1705858
/gene="nemA"
/locus_tag="SF1677"
/db_xref="GeneID:1024863"
CDS 1704761..1705858
/gene="nemA"
/locus_tag="SF1677"
/note="Code: C; COG: COG1902"
/codon_start=1
/transl_table=11
/product="N-ethylmaleimide reductase"
/protein_id="NP_707551.1"
/db_xref="GeneID:1024863"
/translation="MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAE
YYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMALQL
WHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGI
VNDFRQAIANAREAAFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEV
VDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDW
AGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLV
ARLQLKAELNPQRAESFYGGGAEGYTDYPTL"
misc_feature 1704770..1705855
/gene="nemA"
/locus_tag="SF1677"
/note="N-ethylmaleimide reductase; Provisional; Region:
PRK10605"
/db_xref="CDD:182584"
misc_feature order(1704833..1704835,1704839..1704841,1704935..1704937,
1705061..1705063,1705460..1705462,1705664..1705666,
1705724..1705726,1705730..1705738)
/gene="nemA"
/locus_tag="SF1677"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:239243"
misc_feature order(1704833..1704835,1704839..1704841,1704935..1704937,
1705061..1705063,1705067..1705069,1705088..1705090,
1705304..1705306,1705313..1705315,1705319..1705321,
1705460..1705462,1705481..1705483,1705664..1705666,
1705724..1705726,1705730..1705735)
/gene="nemA"
/locus_tag="SF1677"
/note="active site"
/db_xref="CDD:239243"
misc_feature order(1704839..1704841,1705067..1705069,1705304..1705306,
1705313..1705315,1705319..1705321,1705733..1705735)
/gene="nemA"
/locus_tag="SF1677"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:239243"
misc_feature 1705319..1705321
/gene="nemA"
/locus_tag="SF1677"
/note="catalytic residue [active]"
/db_xref="CDD:239243"
gene 1705939..1706346
/gene="gloA"
/locus_tag="SF1678"
/db_xref="GeneID:1024857"
CDS 1705939..1706346
/gene="gloA"
/locus_tag="SF1678"
/note="Code: E; COG: COG0346"
/codon_start=1
/transl_table=11
/product="glyoxalase"
/protein_id="NP_707552.1"
/db_xref="GeneID:1024857"
/translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV
GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
VKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN"
misc_feature 1705942..1706343
/gene="gloA"
/locus_tag="SF1678"
/note="lactoylglutathione lyase; Region: glyox_I;
TIGR00068"
/db_xref="CDD:272886"
misc_feature order(1705945..1705965,1706008..1706010,1706074..1706076,
1706095..1706106,1706134..1706145,1706149..1706172,
1706176..1706178,1706293..1706295,1706302..1706304,
1706308..1706310)
/gene="gloA"
/locus_tag="SF1678"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:319965"
misc_feature order(1705951..1705953,1705963..1705965,1706038..1706040,
1706053..1706055,1706059..1706061,1706104..1706106,
1706110..1706112,1706116..1706118,1706158..1706160,
1706230..1706232,1706266..1706268,1706272..1706274,
1706296..1706298,1706302..1706304)
/gene="gloA"
/locus_tag="SF1678"
/note="active site"
/db_xref="CDD:319965"
misc_feature order(1705963..1705965,1706038..1706040,1706053..1706055,
1706059..1706061,1706110..1706112,1706116..1706118,
1706230..1706232,1706266..1706268,1706272..1706274,
1706296..1706298)
/gene="gloA"
/locus_tag="SF1678"
/note="glutathione binding site [chemical binding]; other
site"
/db_xref="CDD:319965"
gene 1706449..1707096
/gene="rnt"
/locus_tag="SF1679"
/db_xref="GeneID:1024880"
CDS 1706449..1707096
/gene="rnt"
/locus_tag="SF1679"
/note="Code: L; COG: COG0847"
/codon_start=1
/transl_table=11
/product="ribonuclease T"
/protein_id="NP_707553.1"
/db_xref="GeneID:1024880"
/translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKV
VRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALG
QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
misc_feature 1706476..1707075
/gene="rnt"
/locus_tag="SF1679"
/note="ribonuclease T; Region: RNaseT; TIGR01298"
/db_xref="CDD:188129"
misc_feature order(1706485..1706487,1706491..1706493,1706815..1706817,
1706884..1706898,1706905..1706907,1706914..1706919,
1706926..1706931,1707049..1707051)
/gene="rnt"
/locus_tag="SF1679"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:99837"
misc_feature order(1706515..1706526,1706530..1706532,1706806..1706811,
1706815..1706823,1706989..1706991,1707004..1707006)
/gene="rnt"
/locus_tag="SF1679"
/note="putative active site [active]"
/db_xref="CDD:99837"
misc_feature order(1706515..1706526,1706530..1706532,1706806..1706811,
1706815..1706820,1706989..1706991,1707004..1707006)
/gene="rnt"
/locus_tag="SF1679"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:99837"
misc_feature order(1706515..1706517,1706521..1706523,1706821..1706823,
1706989..1706991,1707004..1707006)
/gene="rnt"
/locus_tag="SF1679"
/note="catalytic site [active]"
/db_xref="CDD:99837"
gene 1707189..1711647
/gene="lhr"
/locus_tag="SF1680"
/pseudo
/db_xref="GeneID:1024868"
misc_feature 1707189..1711647
/gene="lhr"
/locus_tag="SF1680"
/note="Similar to Escherichia coli K12 member of
ATP-dependent helicase superfamily II gi: 1787942 (1539
aa). BLAST with identity of 98% in 1486 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct."
/pseudo
gene complement(1711695..1712899)
/locus_tag="SF1681"
/pseudo
/db_xref="GeneID:1024891"
misc_feature complement(1711695..1712899)
/locus_tag="SF1681"
/note="Similar to Escherichia coli K12 virulence protein
gi: 1787702 (403 aa). BLAST with identity of 98% in 401
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene complement(1713446..1713793)
/gene="ydhD"
/locus_tag="SF1682"
/db_xref="GeneID:1024840"
CDS complement(1713446..1713793)
/gene="ydhD"
/locus_tag="SF1682"
/note="Code: O; COG: COG0278"
/codon_start=1
/transl_table=11
/product="glutaredoxin-4"
/protein_id="NP_707554.1"
/db_xref="GeneID:1024840"
/translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG
ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
TAAKYKSEEPDAE"
misc_feature complement(1713449..1713793)
/gene="ydhD"
/locus_tag="SF1682"
/note="Grx4 family monothiol glutaredoxin; Region:
PRK10824"
/db_xref="CDD:182759"
misc_feature complement(order(1713581..1713586,1713698..1713706,
1713728..1713730))
/gene="ydhD"
/locus_tag="SF1682"
/note="putative GSH binding site [chemical binding]; other
site"
/db_xref="CDD:239326"
misc_feature complement(order(1713695..1713697,1713704..1713706))
/gene="ydhD"
/locus_tag="SF1682"
/note="catalytic residues [active]"
/db_xref="CDD:239326"
gene 1714128..1714955
/gene="ydhO"
/locus_tag="SF1683"
/db_xref="GeneID:1024867"
CDS 1714128..1714955
/gene="ydhO"
/locus_tag="SF1683"
/note="Code: M; COG: COG0791"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_707555.2"
/db_xref="GeneID:1024867"
/translation="MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
DKKKSTATTKKTQKASQKTAKKAASKSMTKSKTASSVKKSSITASKNAKTRSKHAVNK
TASASFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPY
RWGGSSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAGPIERSELKNGDLVFF
RTQGRGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
misc_feature 1714302..1714931
/gene="ydhO"
/locus_tag="SF1683"
/note="Cell wall-associated hydrolase, NlpC_P60 family
[Cell wall/membrane/envelope biogenesis]; Region: NlpC;
COG0791"
/db_xref="CDD:440554"
gene 1715083..1715664
/gene="sodB"
/locus_tag="SF1684"
/db_xref="GeneID:1023373"
CDS 1715083..1715664
/gene="sodB"
/locus_tag="SF1684"
/note="Code: P; COG: COG0605"
/codon_start=1
/transl_table=11
/product="superoxide dismutase"
/protein_id="NP_707556.1"
/db_xref="GeneID:1023373"
/translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG
SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
misc_feature 1715083..1715661
/gene="sodB"
/locus_tag="SF1684"
/note="superoxide dismutase [Fe]; Region: PRK10543"
/db_xref="CDD:182534"
gene complement(1715810..1716979)
/locus_tag="SF1685"
/db_xref="GeneID:1024847"
CDS complement(1715810..1716979)
/locus_tag="SF1685"
/note="Code: G; COG: COG2814"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707557.1"
/db_xref="GeneID:1024847"
/translation="MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGM
LISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRIL
TSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRM
SFLATAGLGVISMVSLFFSLPKGGTGARPEVKKELAVLMRPQVLSALLTTVLGAGAMF
TLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLL
MVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMHVASEAPGLSSSVNIGAF
NLGNALGAAAGGAVISAGLGYSFVPVTGAIVAGLALLLVFMSARKQPETVCVANS"
misc_feature complement(1715858..1716961)
/locus_tag="SF1685"
/note="Purine ribonucleoside efflux pump NepI and similar
transporters of the Major Facilitator Superfamily; Region:
MFS_NepI_like; cd17324"
/db_xref="CDD:340882"
misc_feature complement(order(1715966..1715968,1715975..1715980,
1715987..1715992,1715999..1716001,1716044..1716046,
1716056..1716058,1716068..1716073,1716218..1716220,
1716230..1716232,1716314..1716316,1716323..1716331,
1716338..1716343,1716350..1716352,1716554..1716556,
1716563..1716568,1716575..1716577,1716635..1716637,
1716644..1716652,1716656..1716661,1716809..1716811,
1716905..1716907,1716914..1716919,1716926..1716931))
/locus_tag="SF1685"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340882"
gene 1717533..1718468
/locus_tag="SF1686"
/pseudogene="unknown"
/db_xref="GeneID:1024852"
gene complement(1718584..1719525)
/gene="ydhB"
/locus_tag="SF1687"
/db_xref="GeneID:1024846"
CDS complement(1718584..1719525)
/gene="ydhB"
/locus_tag="SF1687"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator"
/protein_id="NP_707559.1"
/db_xref="GeneID:1024846"
/translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
LVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
MSPALTWLLEYLSDSETLNKEWLREPEQTPATGDYRR"
misc_feature complement(1718626..1719525)
/gene="ydhB"
/locus_tag="SF1687"
/note="putative DNA-binding transcriptional regulator;
Provisional; Region: PRK11074"
/db_xref="CDD:182948"
gene 1719638..1720849
/gene="ydhC"
/locus_tag="SF1688"
/db_xref="GeneID:1024888"
CDS 1719638..1720849
/gene="ydhC"
/locus_tag="SF1688"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707560.1"
/db_xref="GeneID:1024888"
/translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
VQAVGVCAAPVIWQALVTDYYRSQKVNRIFATIMPLVGLSPALAPLLGSWIMVHFSWQ
AILATLYAITVVMILPIFWLKPTTKARNNSQDGLTLPDLLRSKTYRGNVLIYSACSAS
FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVDCPNH
GNAEVAHSESH"
misc_feature 1719638..1720846
/gene="ydhC"
/locus_tag="SF1688"
/note="Bcr/CflA family multidrug efflux MFS transporter;
Region: PRK11043"
/db_xref="CDD:182924"
gene 1721140..1722288
/gene="cfa"
/locus_tag="SF1689"
/db_xref="GeneID:1024893"
CDS 1721140..1722288
/gene="cfa"
/locus_tag="SF1689"
/note="Code: M; COG: COG2230"
/codon_start=1
/transl_table=11
/product="cyclopropane fatty acyl phospholipid synthase"
/protein_id="NP_707561.1"
/db_xref="GeneID:1024893"
/translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR
LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCKGLDVTIL
LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
misc_feature 1721140..1722285
/gene="cfa"
/locus_tag="SF1689"
/note="cyclopropane fatty acyl phospholipid synthase;
Region: PRK11705"
/db_xref="CDD:183282"
gene complement(1722328..1722969)
/gene="ribE"
/locus_tag="SF1690"
/db_xref="GeneID:1024885"
CDS complement(1722328..1722969)
/gene="ribE"
/locus_tag="SF1690"
/note="Code: H; COG: COG0307"
/codon_start=1
/transl_table=11
/product="riboflavin synthase subunit alpha"
/protein_id="NP_707562.1"
/db_xref="GeneID:1024885"
/translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH
NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA"
misc_feature complement(1722349..1722969)
/gene="ribE"
/locus_tag="SF1690"
/note="riboflavin synthase subunit alpha; Provisional;
Region: PRK13020"
/db_xref="CDD:183846"
gene 1723184..1723866
/gene="ydhE"
/locus_tag="SF1691"
/pseudo
/db_xref="GeneID:1024853"
misc_feature 1723184..1723866
/gene="ydhE"
/locus_tag="SF1691"
/note="Similar to Escherichia coli K12 transport protein
gi: 1787953 (458 aa). BLAST with identity of 99% in 228
aa. This CDS has been disrupted by insertion. The sequence
has been checked and is believed to be correct."
/pseudo
mobile_element complement(1723873..1725200)
/mobile_element_type="insertion sequence:iso-IS10R"
gene complement(1725935..1727191)
/locus_tag="SF1694"
/db_xref="GeneID:1024890"
CDS complement(1725935..1727191)
/locus_tag="SF1694"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707565.1"
/db_xref="GeneID:1024890"
/translation="MGSDAKNLMSDGNVQIVKTGEVLGATQLTEGELIVEAGGRAENT
VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH
PEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
LLVYPSGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
PVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINL
NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVNGDIRVEITD
ASRQTLCNALKLQPDEDGIGATLQPA"
misc_feature complement(1725938..1727191)
/locus_tag="SF1694"
/note="hypothetical protein; Provisional; Region:
PRK09945"
/db_xref="CDD:137602"
gene 1727499..1727575
/locus_tag="SF4469"
/db_xref="GeneID:3161824"
tRNA 1727499..1727575
/locus_tag="SF4469"
/product="tRNA-Val"
/codon_recognized="GUC"
/db_xref="GeneID:3161824"
gene 1727683..1727988
/locus_tag="SF1695"
/db_xref="GeneID:1024896"
CDS 1727683..1727988
/locus_tag="SF1695"
/codon_start=1
/transl_table=11
/product="monooxygenase"
/protein_id="NP_707566.1"
/db_xref="GeneID:1024896"
/translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
misc_feature 1727683..1727982
/locus_tag="SF1695"
/note="putative monooxygenase; Provisional; Region:
PRK11118"
/db_xref="CDD:182975"
gene 1728114..1729536
/locus_tag="SF1696"
/pseudo
/db_xref="GeneID:1024892"
misc_feature 1728114..1729536
/locus_tag="SF1696"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787957 (535 aa). BLAST with
identity of 98% in 474 aa. This CDS contains deletion. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(1729548..1730360)
/locus_tag="SF1697"
/db_xref="GeneID:1024901"
CDS complement(1729548..1730360)
/locus_tag="SF1697"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707567.1"
/db_xref="GeneID:1024901"
/translation="MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIRHALIEEGYT
DWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCED
NARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRI
ANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTG
VVDSIILGLGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC"
misc_feature complement(1729551..1730360)
/locus_tag="SF1697"
/note="hypothetical protein; Provisional; Region:
PRK09946"
/db_xref="CDD:182159"
gene complement(1730364..1731149)
/gene="ydhU"
/locus_tag="SF1698"
/db_xref="GeneID:1024881"
CDS complement(1730364..1731149)
/gene="ydhU"
/locus_tag="SF1698"
/codon_start=1
/transl_table=11
/product="thiosulfate reductase cytochrome subunit B"
/protein_id="NP_707568.1"
/db_xref="GeneID:1024881"
/translation="MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVL
GLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGAT
AVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGI
MQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYW
LLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH"
misc_feature complement(1730367..1731149)
/gene="ydhU"
/locus_tag="SF1698"
/note="thiosulfate reductase cytochrome B subunit;
Provisional; Region: PRK15006"
/db_xref="CDD:184968"
gene complement(1731146..1731865)
/locus_tag="SF1699"
/db_xref="GeneID:1027793"
CDS complement(1731146..1731865)
/locus_tag="SF1699"
/note="Code: C; COG: COG0437"
/codon_start=1
/transl_table=11
/product="oxidoreductase, Fe-S subunit"
/protein_id="NP_707569.1"
/db_xref="GeneID:1027793"
/translation="MSWIGWTVAATALGDNQMSFTRRKFVLGMGTVIFFTGSASSLLA
NTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQY
HFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYLVRYLNP
VTKVADKCDFCAESRLEKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLP
GAGKPHLYRRFGQHLIKKENV"
misc_feature complement(1731185..1731811)
/locus_tag="SF1699"
/note="cytochrome c nitrite reductase, Fe-S protein;
Region: cyt_nit_nrfC; TIGR03149"
/db_xref="CDD:274451"
gene complement(1731878..1732516)
/locus_tag="SF1700"
/db_xref="GeneID:1024882"
CDS complement(1731878..1732516)
/locus_tag="SF1700"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707570.2"
/db_xref="GeneID:1024882"
/translation="MNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAE
FIRQHSAAGQLVARTVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYS
TQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEA
AIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP"
misc_feature complement(1731881..1732516)
/locus_tag="SF1700"
/note="YdhW family putative oxidoreductase system protein;
Region: PRK09947"
/db_xref="CDD:182160"
gene complement(1732529..1734325)
/gene="ydhV"
/locus_tag="SF1701"
/db_xref="GeneID:1024878"
CDS complement(1732529..1734325)
/gene="ydhV"
/locus_tag="SF1701"
/note="Code: C; COG: COG2414"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707571.1"
/db_xref="GeneID:1024878"
/translation="MKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRAT
TEEICRLTSPETCVAAIGQAGENLIPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEG
TKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWG
AAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNI
PRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWC
NYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELS
HLADGSYAIAERWNLGKEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVKCMFNRDCM
THTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLH
NAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHR
AYTVKPMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGW
DPQLGCPTRETLQRLGLEDIAADLAAHNLLPA"
misc_feature complement(1732532..1734325)
/gene="ydhV"
/locus_tag="SF1701"
/note="putative oxidoreductase; Provisional; Region:
PRK09849"
/db_xref="CDD:236629"
gene complement(1734651..1735277)
/locus_tag="SF1702"
/db_xref="GeneID:1024895"
CDS complement(1734651..1735277)
/locus_tag="SF1702"
/note="Code: C; COG: COG1142"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707572.1"
/db_xref="GeneID:1024895"
/translation="MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQE
DIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFG
DNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCS
ACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV"
misc_feature complement(1734654..1735277)
/locus_tag="SF1702"
/note="ferredoxin-like protein; Region: PRK09898"
/db_xref="CDD:182135"
gene complement(1735733..1735942)
/locus_tag="SF1703"
/db_xref="GeneID:1024874"
CDS complement(1735733..1735942)
/locus_tag="SF1703"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707573.1"
/db_xref="GeneID:1024874"
/translation="MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTA
LANKRIQRSELEKQAMETVINALVK"
misc_feature complement(1735736..1735942)
/locus_tag="SF1703"
/note="fumarate hydratase FumD; Region: PRK10292"
/db_xref="CDD:182359"
mobile_element 1735974..1736741
/mobile_element_type="insertion sequence:IS1"
gene 1736223..1736726
/gene="insB"
/locus_tag="SF1704"
/db_xref="GeneID:1024871"
CDS 1736223..1736726
/gene="insB"
/locus_tag="SF1704"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707574.1"
/db_xref="GeneID:1024871"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
CPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 1736331..1736723
/gene="insB"
/locus_tag="SF1704"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 1737275..1738687
/gene="pykF"
/locus_tag="SF1705"
/db_xref="GeneID:1024886"
CDS 1737275..1738687
/gene="pykF"
/locus_tag="SF1705"
/note="Code: G; COG: COG0469"
/codon_start=1
/transl_table=11
/product="pyruvate kinase"
/protein_id="NP_707575.2"
/db_xref="GeneID:1024886"
/translation="MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHG
QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
PGVSIALPALAEKDKQDLIFGCEKGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
MVSGALVPSGTTNTASVHVL"
misc_feature 1737275..1738684
/gene="pykF"
/locus_tag="SF1705"
/note="pyruvate kinase PykF; Region: PRK09206"
/db_xref="CDD:181699"
misc_feature order(1737281..1737286,1737452..1737454,1737458..1737460,
1737482..1737493,1737746..1737751,1737767..1737769,
1737776..1737790,1737833..1737835,1737857..1737859,
1737878..1737880,1737914..1737916,1738022..1738024,
1738076..1738081,1738091..1738093,1738187..1738189,
1738193..1738195,1738280..1738282,1738286..1738291,
1738439..1738441,1738445..1738447,1738451..1738453,
1738484..1738486,1738493..1738498,1738502..1738504,
1738508..1738516)
/gene="pykF"
/locus_tag="SF1705"
/note="domain interfaces [active]"
/db_xref="CDD:238178"
misc_feature order(1737368..1737370,1737374..1737376,1737470..1737472,
1737851..1737853,1737932..1737934,1737938..1737940,
1738010..1738012,1738106..1738108)
/gene="pykF"
/locus_tag="SF1705"
/note="active site"
/db_xref="CDD:238178"
gene 1738999..1739235
/gene="lpp"
/locus_tag="SF1706"
/db_xref="GeneID:1024897"
CDS 1738999..1739235
/gene="lpp"
/locus_tag="SF1706"
/codon_start=1
/transl_table=11
/product="murein lipoprotein"
/protein_id="NP_707576.1"
/db_xref="GeneID:1024897"
/translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
misc_feature 1738999..1739232
/gene="lpp"
/locus_tag="SF1706"
/note="major outer membrane lipoprotein; Region: PRK15396"
/db_xref="CDD:185294"
gene complement(1739298..1740302)
/gene="ynhG"
/locus_tag="SF1707"
/db_xref="GeneID:1024904"
CDS complement(1739298..1740302)
/gene="ynhG"
/locus_tag="SF1707"
/note="Code: S; COG: COG1376"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707577.1"
/db_xref="GeneID:1024904"
/translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV
QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL
AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
ALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQ
FKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
"
misc_feature complement(1739394..1740284)
/gene="ynhG"
/locus_tag="SF1707"
/note="L,D-transpeptidase; Provisional; Region: PRK10260"
/db_xref="CDD:182341"
gene complement(1740451..1740867)
/gene="ynhA"
/locus_tag="SF1708"
/db_xref="GeneID:1024916"
CDS complement(1740451..1740867)
/gene="ynhA"
/locus_tag="SF1708"
/note="Code: R; COG: COG2166"
/codon_start=1
/transl_table=11
/product="cysteine desufuration protein SufE"
/protein_id="NP_707578.1"
/db_xref="GeneID:1024916"
/translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRAEDGSP
QNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
misc_feature complement(1740490..1740867)
/gene="ynhA"
/locus_tag="SF1708"
/note="cysteine desulfuration protein SufE; Region:
PRK09296"
/db_xref="CDD:181767"
gene complement(1740880..1743438)
/locus_tag="SF1710"
/pseudo
/db_xref="GeneID:1024876"
misc_feature complement(1740880..1743438)
/locus_tag="SF1710"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787970 (407 aa). BLAST with
identity of 98% in 852 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
/pseudo
mobile_element 1741707..1743035
/mobile_element_type="insertion sequence:iso-IS10R"
gene 1741814..1743022
/locus_tag="SF1709"
/db_xref="GeneID:1024911"
CDS 1741814..1743022
/locus_tag="SF1709"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_707579.1"
/db_xref="GeneID:1024911"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature 1741928..1742983
/locus_tag="SF1709"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene complement(1743435..1744706)
/gene="ynhC"
/locus_tag="SF1711"
/db_xref="GeneID:1024883"
CDS complement(1743435..1744706)
/gene="ynhC"
/locus_tag="SF1711"
/note="Code: R; COG: COG0719"
/codon_start=1
/transl_table=11
/product="cysteine desulfurase"
/protein_id="NP_707580.1"
/db_xref="GeneID:1024883"
/translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR
KHENWKYTPLEGLTNSQFVSIAGDISPQQRDALALTLDAVRLVFVDGRYVPALSDAIE
GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQG
VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL
AFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP
VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
misc_feature complement(1743438..1744706)
/gene="ynhC"
/locus_tag="SF1711"
/note="Fe-S cluster assembly protein SufD; Region:
PRK10948"
/db_xref="CDD:236804"
gene complement(1744681..1745427)
/gene="sufC"
/locus_tag="SF1712"
/db_xref="GeneID:1024870"
CDS complement(1744681..1745427)
/gene="sufC"
/locus_tag="SF1712"
/note="Code: R; COG: COG0396"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_707581.1"
/db_xref="GeneID:1024870"
/translation="MLSIKDLHVSVEDKAILRGLSLDVRPGEVHAIMGPNGSGKSTLS
ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
VLEPELCILDESDTGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
misc_feature complement(1744684..1745427)
/gene="sufC"
/locus_tag="SF1712"
/note="cysteine desulfurase ATPase component; Reviewed;
Region: sufC; PRK09580"
/db_xref="CDD:181965"
gene complement(1745437..1746924)
/gene="ynhE"
/locus_tag="SF1713"
/db_xref="GeneID:1027795"
CDS complement(1745437..1746924)
/gene="ynhE"
/locus_tag="SF1713"
/note="Code: R; COG: COG0719"
/codon_start=1
/transl_table=11
/product="cysteine desulfurase"
/protein_id="NP_707582.1"
/db_xref="GeneID:1027795"
/translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR
AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT
CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
EQGIIFCSFGEAIHDHTELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN
AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI
MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
misc_feature complement(1745440..1746924)
/gene="ynhE"
/locus_tag="SF1713"
/note="cysteine desulfurase activator complex subunit
SufB; Provisional; Region: PRK11814"
/db_xref="CDD:236990"
gene complement(1746933..1747301)
/gene="sufA"
/locus_tag="SF1714"
/db_xref="GeneID:1024900"
CDS complement(1746933..1747301)
/gene="sufA"
/locus_tag="SF1714"
/note="Code: S; COG: COG0316"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster assembly scaffold protein"
/protein_id="NP_707583.1"
/db_xref="GeneID:1024900"
/translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLG
VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQSMPFIDGTEVDFVREGLNQI
FKFHNPKAQNECGCGESFRV"
misc_feature complement(1746936..1747301)
/gene="sufA"
/locus_tag="SF1714"
/note="iron-sulfur cluster assembly scaffold protein;
Provisional; Region: sufA; PRK09504"
/db_xref="CDD:181915"
gene complement(1747849..1748118)
/locus_tag="SF1715"
/db_xref="GeneID:1024912"
CDS complement(1747849..1748118)
/locus_tag="SF1715"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707584.1"
/db_xref="GeneID:1024912"
/translation="MTHIAFGHYLHSKRWYTVQVLSKSEDAMSTQLDPTQLAIEFLRR
DQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLGVH"
misc_feature complement(1747852..1748037)
/locus_tag="SF1715"
/note="Domain of unknown function; Region: YdiH;
pfam15930"
/db_xref="CDD:318201"
gene complement(1748137..1748547)
/locus_tag="SF1716"
/db_xref="GeneID:1023371"
CDS complement(1748137..1748547)
/locus_tag="SF1716"
/note="Code: Q; COG: COG2050"
/codon_start=1
/transl_table=11
/product="acyl-CoA esterase"
/protein_id="NP_707585.1"
/db_xref="GeneID:1023371"
/translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS
RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGIC
KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL"
misc_feature complement(1748140..1748547)
/locus_tag="SF1716"
/note="1,4-dihydroxy-2-naphthoyl-CoA hydrolase; Region:
PRK10293"
/db_xref="CDD:182360"
misc_feature complement(order(1748272..1748283,1748302..1748304,
1748389..1748391))
/locus_tag="SF1716"
/note="CoenzymeA binding site [chemical binding]; other
site"
/db_xref="CDD:239527"
misc_feature complement(order(1748281..1748283,1748287..1748301,
1748371..1748373,1748380..1748382,1748386..1748388))
/locus_tag="SF1716"
/note="subunit interaction site [polypeptide binding];
other site"
/db_xref="CDD:239527"
misc_feature complement(order(1748302..1748304,1748344..1748349,
1748356..1748361,1748383..1748385))
/locus_tag="SF1716"
/note="PHB binding site [active]"
/db_xref="CDD:239527"
gene complement(1748544..1751600)
/gene="ydiJ"
/locus_tag="SF1717"
/db_xref="GeneID:1024875"
CDS complement(1748544..1751600)
/gene="ydiJ"
/locus_tag="SF1717"
/codon_start=1
/transl_table=11
/product="oxidase"
/protein_id="NP_707586.1"
/db_xref="GeneID:1024875"
/translation="MIPQISLAPGVVQLVLNFLQELEQQGFTGDAATSYADRLTMSTD
NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
DASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVY
QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
ELITDMPDKEMLGLNIVEFAGDDEALIDERVNALCVRLDELIASQQAGVIGWQVCREL
AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
GMFGHVDAGVLHVRPALDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI
AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTQ
CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLEALNAEQKARTVLVVQDPFTS
YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESHPVATVSGESWY
FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYE
LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
misc_feature complement(1749972..1751549)
/gene="ydiJ"
/locus_tag="SF1717"
/note="FAD/FMN-containing lactate dehydrogenase/glycolate
oxidase [Energy production and conversion]; Region: GlcD;
COG0277"
/db_xref="CDD:440046"
misc_feature complement(1748547..1750118)
/gene="ydiJ"
/locus_tag="SF1717"
/note="Fe-S cluster-containing oxidoreductase, includes
glycolate oxidase subunit GlcF [Energy production and
conversion]; Region: GlpC; COG0247"
/db_xref="CDD:440017"
gene 1751989..1753101
/locus_tag="SF1718"
/db_xref="GeneID:1024908"
CDS 1751989..1753101
/locus_tag="SF1718"
/note="Code: R; COG: COG0628"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707587.1"
/db_xref="GeneID:1024908"
/translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS
GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK"
misc_feature 1751989..1753053
/locus_tag="SF1718"
/note="AI-2E family transporter YdiK; Region: PRK10983"
/db_xref="CDD:182881"
gene 1753530..1753886
/locus_tag="SF1719"
/db_xref="GeneID:1024920"
CDS 1753530..1753886
/locus_tag="SF1719"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707588.2"
/db_xref="GeneID:1024920"
/translation="MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIP
DCVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQQVYPDGNFIDWKIY
QSVAAELYAHDLERLC"
misc_feature 1753533..1753883
/locus_tag="SF1719"
/note="Domain of unknown function (DUF1870); Region:
DUF1870; pfam08965"
/db_xref="CDD:401061"
gene 1754046..1755191
/locus_tag="SF1720"
/db_xref="GeneID:1024913"
CDS 1754046..1755191
/locus_tag="SF1720"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_707589.2"
/db_xref="GeneID:1024913"
/translation="MGVILMSLNMASLETLWQTNAAGVSIVISSLGIGRLSVLLFAGL
LSDRFGRRPFIMLGMCCYMAFFFDILQTNNIIIAYVFGFLAGMANSFLDAGTYPSLME
AFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWFGWSFMIAAGIMFINALFLYR
CTFPPHPGRRLPVIKKTTSSTEHRCSIIDLASYTLYGYISMATFYLVSQWLAQYGQFV
AGMSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTTLLMLYTFISFIALFTVCLHP
TFYVVIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGKATGIYYSTGSIATFTIPLIT
AHLSQRSIADIMWFDTAIGFLLALFIGLRSRKKTRHHSLKENVAPGG"
misc_feature 1754046..1755143
/locus_tag="SF1720"
/note="Inner membrane transport protein YdiM and similar
proteins of the Major Facilitator Superfamily of
transporters; Region: MFS_YdiM_like; cd17396"
/db_xref="CDD:340954"
misc_feature order(1754052..1754057,1754064..1754066,1754160..1754162,
1754310..1754315,1754319..1754327,1754334..1754336,
1754391..1754393,1754400..1754405,1754412..1754414,
1754625..1754627,1754634..1754639,1754646..1754654,
1754661..1754663,1754754..1754756,1754766..1754768,
1754919..1754924,1754934..1754936,1754946..1754948,
1754994..1754996,1755003..1755008,1755015..1755020,
1755027..1755029)
/locus_tag="SF1720"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340954"
gene 1755485..1756645
/locus_tag="SF1721"
/db_xref="GeneID:1024884"
CDS 1755485..1756645
/locus_tag="SF1721"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="amino acid/amine transport protein"
/protein_id="NP_707590.1"
/db_xref="GeneID:1024884"
/translation="MTSLAEKFSTDNAGIAYLISGIGLGRLISILFFGVISDKFGRRA
VILMAVIMYLLFFFGIPACPNLTLAYGLAVCVGIANSALDTGGYPALMECFPKASGSA
VILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVD
ASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYAMAFAGMSEAEALK
TISYYSMGSLVCVFIFAALLKKMVRPIWANVFNSALATITAAIIYLYPSPLVCNAGAF
VIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQY
IIVLDFTFALLALITAIIVFSRYYRVFIIPENDVRFGERKFSTRLNTIKHRG"
misc_feature 1755485..1756561
/locus_tag="SF1721"
/note="Inner membrane transport protein YdiM and similar
proteins of the Major Facilitator Superfamily of
transporters; Region: MFS_YdiM_like; cd17396"
/db_xref="CDD:340954"
misc_feature order(1755572..1755574,1755722..1755727,1755731..1755739,
1755746..1755748,1755803..1755805,1755812..1755817,
1755824..1755826,1756034..1756036,1756043..1756048,
1756055..1756063,1756070..1756072,1756163..1756165,
1756175..1756177,1756328..1756333,1756343..1756345,
1756355..1756357,1756403..1756405,1756412..1756417,
1756424..1756429,1756436..1756438)
/locus_tag="SF1721"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340954"
gene 1756657..1757523
/gene="aroE"
/locus_tag="SF1722"
/db_xref="GeneID:1024925"
CDS 1756657..1757523
/gene="aroE"
/locus_tag="SF1722"
/note="Code: E; COG: COG0169"
/codon_start=1
/transl_table=11
/product="quinate/shikimate dehydrogenase"
/protein_id="NP_707591.1"
/db_xref="GeneID:1024925"
/translation="MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEV
DNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLR
GYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEF
FDKALAFAQRVNENTDCVVTDTDLADQQAFAEALASADILTNGTKVGMKPFENESLVN
DISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFP
LEYVKQVMGFGA"
misc_feature 1756657..1757520
/gene="aroE"
/locus_tag="SF1722"
/note="quinate/shikimate dehydrogenase; Reviewed; Region:
PRK12749"
/db_xref="CDD:183721"
gene 1757554..1758312
/gene="aroD"
/locus_tag="SF1723"
/db_xref="GeneID:1024864"
CDS 1757554..1758312
/gene="aroD"
/locus_tag="SF1723"
/note="Code: E; COG: COG0710"
/codon_start=1
/transl_table=11
/product="3-dehydroquinase"
/protein_id="NP_707592.1"
/db_xref="GeneID:1024864"
/translation="MKTVTVKDLVIGAGAPKIIVSLMAKDIARVKSEALAYREADFDI
LEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
AAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLVGEV
FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
misc_feature 1757554..1758309
/gene="aroD"
/locus_tag="SF1723"
/note="type I 3-dehydroquinate dehydratase; Region: aroD;
PRK02412"
/db_xref="CDD:235036"
misc_feature order(1757614..1757616,1757689..1757691,1757695..1757697,
1757797..1757799,1757980..1757982,1758061..1758063,
1758190..1758192,1758247..1758252,1758259..1758261)
/gene="aroD"
/locus_tag="SF1723"
/note="active site"
/db_xref="CDD:188633"
misc_feature 1758061..1758063
/gene="aroD"
/locus_tag="SF1723"
/note="catalytic residue [active]"
/db_xref="CDD:188633"
misc_feature order(1758097..1758099,1758109..1758111,1758118..1758120,
1758193..1758198,1758208..1758210,1758274..1758276,
1758286..1758288,1758295..1758297)
/gene="aroD"
/locus_tag="SF1723"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188633"
mobile_element complement(1758379..1759146)
/mobile_element_type="insertion sequence:IS1"
gene complement(1758394..1758789)
/gene="insB"
/locus_tag="SF1724"
/db_xref="GeneID:1024889"
CDS complement(1758394..1758789)
/gene="insB"
/locus_tag="SF1724"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707593.1"
/db_xref="GeneID:1024889"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1758397..1758786)
/gene="insB"
/locus_tag="SF1724"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1758816..1759091)
/gene="insA"
/locus_tag="SF1725"
/db_xref="GeneID:1024922"
CDS complement(1758816..1759091)
/gene="insA"
/locus_tag="SF1725"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707594.1"
/db_xref="GeneID:1024922"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1758819..1759070)
/gene="insA"
/locus_tag="SF1725"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1759201..1760691
/gene="ydeN"
/locus_tag="SF1726"
/db_xref="GeneID:1026452"
CDS 1759201..1760691
/gene="ydeN"
/locus_tag="SF1726"
/note="Code: P; COG: COG3119"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="NP_707595.1"
/db_xref="GeneID:1026452"
/translation="MDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKS
TPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGIPLTETF
LPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQNRGFDY
FMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPFMLYLAY
NAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQYDNTII
LFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDF
YPTALDAADISIPKDLKLDGVPLLPWLQDKKQGEPHKNLTWITSYSHWFDEENIPFWD
NYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYKLTDLQQKDN
LAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK"
misc_feature 1759330..1760589
/gene="ydeN"
/locus_tag="SF1726"
/note="alkaline phosphatases and sulfatases; Region:
ALP_like; cl23718"
/db_xref="CDD:474031"
misc_feature order(1759402..1759404,1759864..1759866,1760041..1760046)
/gene="ydeN"
/locus_tag="SF1726"
/note="active site"
/db_xref="CDD:293765"
gene 1760743..1761900
/locus_tag="SF1727"
/db_xref="GeneID:1024903"
CDS 1760743..1761900
/locus_tag="SF1727"
/note="Code: R; COG: COG0641"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707596.2"
/db_xref="GeneID:1024903"
/translation="MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIK
QYIEASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNTLQTNGILLNNEW
CAFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVI
NNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAY
GKFMSTIFMQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIY
ECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRISAKCQQCAYKPICNGGCPKHRIT
KVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN"
misc_feature 1760746..1761837
/locus_tag="SF1727"
/note="anaerobic sulfatase-maturating enzyme; Region:
sulfatase_rSAM; TIGR03942"
/db_xref="CDD:188457"
gene 1762191..1763876
/gene="yddA"
/locus_tag="SF1728"
/pseudo
/db_xref="GeneID:1024924"
misc_feature 1762191..1763876
/gene="yddA"
/locus_tag="SF1728"
/note="Similar to Escherichia coli K12 ATP-binding
component of a transport system gi: 1787772 (562 aa).
BLAST with identity of 98% in 562 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene 1763914..1766274
/gene="yddB"
/locus_tag="SF1729"
/db_xref="GeneID:1024919"
CDS 1763914..1766274
/gene="yddB"
/locus_tag="SF1729"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707597.1"
/db_xref="GeneID:1024919"
/translation="MKRVLIPGVILCGADVAQAVDDKNMYMYFFEEMTVYAPVPVPVN
GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY
QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG
RFNGGVIDAKIKRFNADDSKVKLGYRTTRLDWLTSHIDENNKSAFNQGSSGSTYFSPD
FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALS
KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR
TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ
KFAVGDVSHQPYFGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGSLGIDN
YTLYMADHISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFADQTSMITAGYNRY
YGGNILDMGLRDIRNSWTESVSGNKTLTRYQNLKTPYNDELAMGLQQKIDKNVIARAS
EAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFNLSFELAEPLHIRQVDINPQIVFS
YIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFTHQPS
GLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSWTPQF
LKQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF"
misc_feature 1764004..1765731
/gene="yddB"
/locus_tag="SF1729"
/note="Outer membrane receptor for ferrienterochelin and
colicins [Inorganic ion transport and metabolism]; Region:
FepA; COG4771"
/db_xref="CDD:443803"
mobile_element complement(1766529..1767296)
/mobile_element_type="insertion sequence:IS1"
gene complement(1766544..1767047)
/gene="insB"
/locus_tag="SF1730"
/db_xref="GeneID:1024906"
CDS complement(1766544..1767047)
/gene="insB"
/locus_tag="SF1730"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707598.1"
/db_xref="GeneID:1024906"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKLLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature complement(1766547..1766939)
/gene="insB"
/locus_tag="SF1730"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 1767122..1769053
/locus_tag="SF1731"
/pseudogene="unknown"
/db_xref="GeneID:1024887"
mobile_element 1769032..1769799
/mobile_element_type="insertion sequence:IS1"
gene 1769087..1769362
/gene="insA"
/locus_tag="SF1732"
/db_xref="GeneID:1024905"
CDS 1769087..1769362
/gene="insA"
/locus_tag="SF1732"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707600.1"
/db_xref="GeneID:1024905"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1769108..>1769359
/gene="insA"
/locus_tag="SF1732"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1769389..1769784
/gene="insB"
/locus_tag="SF1733"
/db_xref="GeneID:1024902"
CDS 1769389..1769784
/gene="insB"
/locus_tag="SF1733"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707601.1"
/db_xref="GeneID:1024902"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1769392..1769781
/gene="insB"
/locus_tag="SF1733"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 1770262..1771662
/gene="gadB"
/locus_tag="SF1734"
/db_xref="GeneID:1024938"
CDS 1770262..1771662
/gene="gadB"
/locus_tag="SF1734"
/note="Code: E; COG: COG0076"
/codon_start=1
/transl_table=11
/product="glutamate decarboxylase"
/protein_id="NP_707602.2"
/db_xref="GeneID:1024938"
/translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVN
MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG
PVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYE
FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK
FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL
GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTL
YDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD
HPKLQGIAQQNSFKHT"
misc_feature 1770307..1771608
/gene="gadB"
/locus_tag="SF1734"
/note="glutamate decarboxylase; Region: Glu-decarb-GAD;
TIGR01788"
/db_xref="CDD:130848"
misc_feature order(1770637..1770642,1770649..1770651,1770883..1770885,
1770988..1770990,1770997..1770999,1771078..1771080,
1771087..1771089)
/gene="gadB"
/locus_tag="SF1734"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99743"
misc_feature 1771087..1771089
/gene="gadB"
/locus_tag="SF1734"
/note="catalytic residue [active]"
/db_xref="CDD:99743"
gene 1771818..1773353
/gene="xasA"
/locus_tag="SF1735"
/db_xref="GeneID:1024915"
CDS 1771818..1773353
/gene="xasA"
/locus_tag="SF1735"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="acid sensitivity protein transporter"
/protein_id="NP_707603.2"
/db_xref="GeneID:1024915"
/translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
KKH"
misc_feature 1771839..1773344
/gene="xasA"
/locus_tag="SF1735"
/note="glutamate:gamma-aminobutyrate antiporter; Region:
2A0307_GadC; TIGR00910"
/db_xref="CDD:129988"
gene 1773484..1774803
/locus_tag="SF1736"
/db_xref="GeneID:1024952"
CDS 1773484..1774803
/locus_tag="SF1736"
/note="Code: S; COG: COG1649"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707604.1"
/db_xref="GeneID:1024952"
/translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIA
KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS"
misc_feature 1773646..1774653
/locus_tag="SF1736"
/note="Glycosyl hydrolase-like 10; Region: GHL10;
pfam02638"
/db_xref="CDD:251441"
gene 1775180..1776325
/gene="yddV"
/locus_tag="SF1737"
/db_xref="GeneID:1024899"
CDS 1775180..1776325
/gene="yddV"
/locus_tag="SF1737"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707605.1"
/db_xref="GeneID:1024899"
/translation="MEMYFKRMKDEWTGLVEQADPLIRAKAAEIALAHAHYLSIEFYR
IVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIG
IPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDS
SASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKVLLDSDLGSSLPLSQADFG
LWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRILNNRSLRVKFLLQIRNTV
SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV
DKFKEINDTWGHNTGDEILRKVSFLSQKRLVKSKILGAGSSRKLAVS"
misc_feature 1775198..1775638
/gene="yddV"
/locus_tag="SF1737"
/note="Globin sensor domain of Escherichia coli Direct
Oxygen Sensing Cyclase and related proteins; coupled to a
C-terminal GGDEF domain; Region: GS_EcDosC-like_GGDEF;
cd14757"
/db_xref="CDD:381271"
misc_feature order(1775216..1775224,1775312..1775314,1775492..1775500,
1775504..1775509,1775516..1775518,1775525..1775527,
1775588..1775593,1775600..1775605,1775612..1775614,
1775624..1775626)
/gene="yddV"
/locus_tag="SF1737"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:381271"
misc_feature order(1775333..1775335,1775342..1775344,1775372..1775374,
1775381..1775386,1775393..1775395,1775459..1775461,
1775468..1775473,1775486..1775488,1775498..1775500,
1775510..1775515,1775630..1775632)
/gene="yddV"
/locus_tag="SF1737"
/note="heme binding site [chemical binding]; other site"
/db_xref="CDD:381271"
misc_feature 1775732..>1776250
/gene="yddV"
/locus_tag="SF1737"
/note="GGDEF domain, diguanylate cyclase (c-di-GMP
synthetase) or its enzymatically inactive variants [Signal
transduction mechanisms]; Region: GGDEF; COG2199"
/db_xref="CDD:441801"
misc_feature 1776068..>1776247
/gene="yddV"
/locus_tag="SF1737"
/note="Class III nucleotidyl cyclases; Region:
Nucleotidyl_cyc_III; cl11967"
/db_xref="CDD:448371"
gene 1776250..1776867
/locus_tag="SF1738"
/pseudo
/db_xref="GeneID:1024898"
misc_feature 1776250..1776867
/locus_tag="SF1738"
/note="Similar to Escherichia coli K12 enzyme gi: 1787765
(808 aa). BLAST with identity of 98% in 206 aa. This CDS
has been truncated. The sequence has been checked and is
believed to be correct."
/pseudo
gene 1777125..1777456
/locus_tag="SF1739"
/pseudo
/db_xref="GeneID:1024909"
misc_feature 1777125..1777456
/locus_tag="SF1739"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787763 (194 aa). BLAST with
identity of 97% in 111 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 1777471..1778367
/locus_tag="SF1740"
/pseudo
/db_xref="GeneID:1024953"
misc_feature 1777471..1778367
/locus_tag="SF1740"
/note="Similar to Escherichia coli K12 transport protein
gi: 1787760 (299 aa). BLAST with identity of 98% in 299
aa. This CDS ontains frameshift. The sequence has been
checked and is believed to be correct."
/pseudo
gene 1778364..1779350
/locus_tag="SF1741"
/db_xref="GeneID:1024940"
CDS 1778364..1779350
/locus_tag="SF1741"
/note="Code: EP; COG: COG0444"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_707606.1"
/db_xref="GeneID:1024940"
/translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES
GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPM
TALNPTRRIGLQMMDVIRHHQPISRREARAKAIALLEEMQIPDAVEVMSRYPFELSGG
MRQRVMIAPAFSCEPQLIIAGEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA
VVSQLCDSVYVMYAGSVIESGGTADVIHHPRHPYTIGLLQCAPEHGVPRQPLPAIPGT
VPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQHCTCWYPQQEVISV"
misc_feature 1778376..1779338
/locus_tag="SF1741"
/note="ABC-type dipeptide/oligopeptide/nickel transport
system, ATPase component [Amino acid transport and
metabolism, Inorganic ion transport and metabolism];
Region: DppD; COG0444"
/db_xref="CDD:440213"
gene 1779343..1780113
/locus_tag="SF1742"
/db_xref="GeneID:1024894"
CDS 1779343..1780113
/locus_tag="SF1742"
/note="Code: EP; COG: COG1124"
/codon_start=1
/transl_table=11
/product="peptide ABC transporter ATP-binding protein"
/protein_id="NP_707607.1"
/db_xref="GeneID:1024894"
/translation="MSDTLLTLRDVHINFPARKNWLGKSTEHVHAINGIDLQIRRGET
LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
ITESLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
PDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL
GQIVELGDAQQVLTASAHPYTRLLLDSLPAIDKPLEEE"
misc_feature 1779343..1780092
/locus_tag="SF1742"
/note="ABC-type oligopeptide transport system, ATPase
component [Amino acid transport and metabolism]; Region:
AppF; COG4608"
/db_xref="CDD:443658"
gene complement(1780325..1780756)
/gene="osmC"
/locus_tag="SF1743"
/db_xref="GeneID:1024939"
CDS complement(1780325..1780756)
/gene="osmC"
/locus_tag="SF1743"
/note="Code: O; COG: COG1764"
/codon_start=1
/transl_table=11
/product="osmotically inducible protein"
/protein_id="NP_707608.1"
/db_xref="GeneID:1024939"
/translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK
GTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKS
EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS"
misc_feature complement(1780343..1780744)
/gene="osmC"
/locus_tag="SF1743"
/note="peroxiredoxin, OsmC subfamily; Region:
osmo_induc_OsmC; TIGR03562"
/db_xref="CDD:274650"
mobile_element complement(1780914..1781681)
/mobile_element_type="insertion sequence:IS1"
gene complement(1780929..1781324)
/gene="insB"
/locus_tag="SF1744"
/db_xref="GeneID:1024936"
CDS complement(1780929..1781324)
/gene="insB"
/locus_tag="SF1744"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707609.1"
/db_xref="GeneID:1024936"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1780932..1781321)
/gene="insB"
/locus_tag="SF1744"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1781351..1781626)
/gene="insA"
/locus_tag="SF1745"
/db_xref="GeneID:1024907"
CDS complement(1781351..1781626)
/gene="insA"
/locus_tag="SF1745"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707610.1"
/db_xref="GeneID:1024907"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1781354..1781605)
/gene="insA"
/locus_tag="SF1745"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1781814..1783511
/gene="sfcA"
/locus_tag="SF1746"
/db_xref="GeneID:1023372"
CDS 1781814..1783511
/gene="sfcA"
/locus_tag="SF1746"
/note="Code: C; COG: COG0281"
/codon_start=1
/transl_table=11
/product="malate dehydrogenase"
/protein_id="NP_707611.2"
/db_xref="GeneID:1023372"
/translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
TDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFM
VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
misc_feature 1781814..1783502
/gene="sfcA"
/locus_tag="SF1746"
/note="oxaloacetate-decarboxylating malate dehydrogenase;
Region: PRK13529"
/db_xref="CDD:237414"
gene 1783645..1784655
/gene="adhP"
/locus_tag="SF1747"
/db_xref="GeneID:1024935"
CDS 1783645..1784655
/gene="adhP"
/locus_tag="SF1747"
/note="Code: R; COG: COG1064"
/codon_start=1
/transl_table=11
/product="ethanol-active dehydrogenase/acetaldehyde-active
reductase"
/protein_id="NP_707612.1"
/db_xref="GeneID:1024935"
/translation="MKTAVVTKDHHVDVTDKTLRSLKHGEALLKMECCGVCHTDLHVK
NGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETL
CRSVKNAGYSVDGGMEEECIVVADYAVKVPDGLDSAAPSSITCAGVTTYKAVKLSKIR
PGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMDADLAINSRTEDA
AKIVQEKTGGAHAAVVTAVAKAAFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDG
IEVVGSLVGTRQDLTEAFQFAAEGKVVPKVALRPLADINTIFTEMEEGKIRGRMVIDF
RH"
misc_feature 1783645..1784652
/gene="adhP"
/locus_tag="SF1747"
/note="ethanol-active dehydrogenase/acetaldehyde-active
reductase; Provisional; Region: PRK09422"
/db_xref="CDD:181842"
gene 1784723..1785085
/gene="yddM"
/locus_tag="SF1748"
/db_xref="GeneID:1024914"
CDS 1784723..1785085
/gene="yddM"
/locus_tag="SF1748"
/note="Code: N; COG: COG3093"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707613.1"
/db_xref="GeneID:1024914"
/translation="MDYCCVGRNNNDSVPREVTLLRVKTLMKMANHPRPGDIIQESLD
ELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVIGSSPQMWLNLQNAWSL
AEAEKTVVVSRLRRLVTQ"
misc_feature 1784813..1785043
/gene="yddM"
/locus_tag="SF1748"
/note="addiction module antidote protein, HigA family;
Region: antidote_HigA; TIGR02607"
/db_xref="CDD:274228"
gene complement(1785313..1785966)
/gene="fdnI"
/locus_tag="SF1749"
/db_xref="GeneID:1024930"
CDS complement(1785313..1785966)
/gene="fdnI"
/locus_tag="SF1749"
/note="Code: C; COG: COG2864"
/codon_start=1
/transl_table=11
/product="formate dehydrogenase-N subunit gamma"
/protein_id="NP_707614.2"
/db_xref="GeneID:1024930"
/translation="MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLT
QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK
VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
misc_feature complement(1785316..1785966)
/gene="fdnI"
/locus_tag="SF1749"
/note="formate dehydrogenase-N subunit gamma; Provisional;
Region: PRK10179"
/db_xref="CDD:182289"
gene complement(1785959..1786843)
/gene="fdnH"
/locus_tag="SF1750"
/db_xref="GeneID:1024947"
CDS complement(1785959..1786843)
/gene="fdnH"
/locus_tag="SF1750"
/note="Code: C; COG: COG0437"
/codon_start=1
/transl_table=11
/product="formate dehydrogenase-N iron-sulfur subunit
beta"
/protein_id="NP_707615.1"
/db_xref="GeneID:1024947"
/translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
CEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC
TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG
VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY
IGIGPNKEVDDDEEDHHE"
misc_feature complement(1785974..1786825)
/gene="fdnH"
/locus_tag="SF1750"
/note="formate dehydrogenase, beta subunit, Fe-S
containing; Region: FDH-beta; TIGR01582"
/db_xref="CDD:273705"
gene complement(1786856..1789903)
/gene="fdnG"
/locus_tag="SF1751"
/db_xref="GeneID:1027797"
CDS complement(1786856..1789903)
/gene="fdnG"
/locus_tag="SF1751"
/note="Code: C; COG: COG0243"
/codon_start=1
/transl_except=(pos:complement(1789316..1789318),aa:Sec)
/transl_table=11
/product="formate dehydrogenase-N subunit alpha"
/protein_id="NP_707616.1"
/db_xref="GeneID:1027797"
/translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
NSENRLRYPKYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIR
SGTDITFLSGILRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
KSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE
VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSL
MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
QPEQFVEISETQAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
misc_feature complement(1786862..1789900)
/gene="fdnG"
/locus_tag="SF1751"
/note="Molybdopterin-Binding (MopB) domain of the MopB
superfamily of proteins, a large, diverse, heterogeneous
superfamily of enzymes that, in general, bind
molybdopterin as a cofactor. The MopB domain is found in a
wide variety of molybdenum- and...; Region:
Molybdopterin-Binding; cl09928"
/db_xref="CDD:447860"
misc_feature complement(order(1789187..1789192,1789628..1789630,
1789733..1789735,1789745..1789750,1789754..1789756))
/gene="fdnG"
/locus_tag="SF1751"
/note="[4Fe-4S] binding site [ion binding]; other site"
/db_xref="CDD:239153"
misc_feature complement(order(1787957..1787959,1788053..1788055,
1788143..1788145,1788152..1788160,1788218..1788220,
1788230..1788238,1788560..1788565,1788659..1788664,
1788671..1788679,1789064..1789066,1789070..1789072,
1789121..1789129,1789196..1789201,1789208..1789210,
1789214..1789216,1789316..1789318,1789328..1789330,
1789622..1789624))
/gene="fdnG"
/locus_tag="SF1751"
/note="molybdopterin cofactor binding site; other site"
/db_xref="CDD:239153"
gene 1790135..1791016
/gene="yddG"
/locus_tag="SF1752"
/db_xref="GeneID:1024943"
CDS 1790135..1791016
/gene="yddG"
/locus_tag="SF1752"
/note="Code: GER; COG: COG0697"
/codon_start=1
/transl_table=11
/product="aromatic amino acid exporter"
/protein_id="NP_707617.1"
/db_xref="GeneID:1024943"
/translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS
GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEIYLALSLGYAATRHQAIEVGMVNYLW
PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGENGLHYDEIINNITTSPLSYF
LAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGACLWIYYFLTPQPEMVFSTPVMIK
LISAAFTLGFAYTAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGA
LMVCGGSLLCWLATRRG"
misc_feature 1790138..1791010
/gene="yddG"
/locus_tag="SF1752"
/note="aromatic amino acid efflux DMT transporter YddG;
Region: PRK11689"
/db_xref="CDD:183277"
mobile_element complement(1791204..1791971)
/mobile_element_type="insertion sequence:IS1"
gene complement(1791219..1791614)
/gene="insB"
/locus_tag="SF1753"
/db_xref="GeneID:1024933"
CDS complement(1791219..1791614)
/gene="insB"
/locus_tag="SF1753"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707618.1"
/db_xref="GeneID:1024933"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(1791222..1791611)
/gene="insB"
/locus_tag="SF1753"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1791641..1791916)
/gene="insA"
/locus_tag="SF1754"
/db_xref="GeneID:1024910"
CDS complement(1791641..1791916)
/gene="insA"
/locus_tag="SF1754"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707619.1"
/db_xref="GeneID:1024910"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<1791644..1791895)
/gene="insA"
/locus_tag="SF1754"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1792048..1793148
/locus_tag="SF1755"
/db_xref="GeneID:1026460"
CDS 1792048..1793148
/locus_tag="SF1755"
/note="Code: M; COG: COG3203"
/codon_start=1
/transl_table=11
/product="porin"
/protein_id="NP_707620.1"
/db_xref="GeneID:1026460"
/translation="MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYF
TDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGNKTRLAYAG
LKISEFGSLDYGRNYGVGYDIGSWTDMLPEFGGDTWSQKDVFMTYRTTGLATYRNYDF
FGLIEGLNFAAQYQGKNKRTDNSHLYGADDTRANGDGFGISSTYVYDGFGIGAVYTKS
DRTNAQERAAANPLNASGKNAELWATGIKYDANNIYFAANYDETLNMTTYGDGYISNK
AQSFEVVAQYQFDFGLRPSLAYLKSKGRDLGRYADQDMIEYIDVGATYFFNKNMSTYV
DYKINLIDESDFTRTVDIRTDNIVATGITYQF"
misc_feature 1792087..1793145
/locus_tag="SF1755"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl21487"
/db_xref="CDD:473880"
misc_feature order(1792135..1792137,1792141..1792143,1792159..1792161,
1792165..1792173,1792234..1792248,1792264..1792266,
1792270..1792278,1792282..1792284,1792288..1792299,
1792333..1792338,1792342..1792356,1792384..1792392,
1792489..1792491,1792495..1792500,1793023..1793028,
1793035..1793037,1793131..1793133,1793137..1793139,
1793143..1793145)
/locus_tag="SF1755"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238208"
misc_feature order(1792156..1792158,1792219..1792221,1792336..1792338,
1792429..1792431,1792489..1792491)
/locus_tag="SF1755"
/note="eyelet of channel [active]"
/db_xref="CDD:238208"
gene 1793312..1793797
/locus_tag="SF1756"
/db_xref="GeneID:1024937"
CDS 1793312..1793797
/locus_tag="SF1756"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707621.1"
/db_xref="GeneID:1024937"
/translation="MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLEQWGNKS
VNNGEERAIAVERIKEAYNSNMASLDLSYLDLSELPPIPSTVNTLNLENNCLTCLDLA
DNASLVNINLSVNKINTITFPKEPKLENIYINHNNLESLDLKNQHSLVNLEAQNNSLK
K"
misc_feature <1793501..>1793794
/locus_tag="SF1756"
/note="type III secretion system effector E3 ubiquitin
transferase SlrP; Region: PRK15370"
/db_xref="CDD:185268"
misc_feature 1793507..1793566
/locus_tag="SF1756"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1793567..1793629
/locus_tag="SF1756"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1793630..1793692
/locus_tag="SF1756"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1793693..1793755
/locus_tag="SF1756"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
gene 1793907..1795133
/locus_tag="SF1757"
/pseudogene="unknown"
/db_xref="GeneID:1024934"
mobile_element 1795129..1795896
/mobile_element_type="insertion sequence:IS1"
gene 1795184..1795459
/gene="insA"
/locus_tag="SF1758"
/db_xref="GeneID:1024931"
CDS 1795184..1795459
/gene="insA"
/locus_tag="SF1758"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707623.1"
/db_xref="GeneID:1024931"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1795205..>1795456
/gene="insA"
/locus_tag="SF1758"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1795486..1795881
/gene="insB"
/locus_tag="SF1759"
/db_xref="GeneID:1024918"
CDS 1795486..1795881
/gene="insB"
/locus_tag="SF1759"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707624.1"
/db_xref="GeneID:1024918"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1795489..1795878
/gene="insB"
/locus_tag="SF1759"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 1796339..1797727
/gene="narU"
/locus_tag="SF1760"
/db_xref="GeneID:1024946"
CDS 1796339..1797727
/gene="narU"
/locus_tag="SF1760"
/note="Code: P; COG: COG2223"
/codon_start=1
/transl_table=11
/product="nitrate/nitrite transport protein NarU"
/protein_id="NP_707625.2"
/db_xref="GeneID:1024946"
/translation="MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLL
LAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRW
PVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAK
QGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWV
PLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFA
MLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF
LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA
QREAVTETAATLGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLT
WLVYGRRKFSQK"
misc_feature 1796339..1797724
/gene="narU"
/locus_tag="SF1760"
/note="nitrate/nitrite transport protein NarU;
Provisional; Region: PRK15034"
/db_xref="CDD:184994"
misc_feature order(1796474..1796479,1796486..1796491,1796498..1796500,
1796597..1796599,1796762..1796767,1796771..1796779,
1796786..1796788,1796843..1796845,1796852..1796857,
1796864..1796866,1797119..1797121,1797128..1797133,
1797140..1797148,1797155..1797157,1797233..1797235,
1797245..1797247,1797410..1797415,1797425..1797427,
1797437..1797439,1797548..1797550,1797557..1797562,
1797569..1797574,1797581..1797583)
/gene="narU"
/locus_tag="SF1760"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340899"
gene 1797752..1801549
/gene="narZ"
/locus_tag="SF1761"
/pseudo
/db_xref="GeneID:1024923"
misc_feature 1797752..1801549
/gene="narZ"
/locus_tag="SF1761"
/note="'Similar to Escherichia coli K12 cryptic nitrate
reductase 2, alpha subunit ref: NP_415985.1 (1246 aa).
BLAST with identity of 100% in 1266 aa. This CDS contains
an in-frame stop codon. The sequence has been checked and
is believed to be correct.'"
/pseudo
gene 1801546..1802478
/locus_tag="SF1762"
/db_xref="GeneID:1024968"
CDS 1801546..1802478
/locus_tag="SF1762"
/codon_start=1
/transl_table=11
/product="nitrate reductase 1 subunit beta"
/protein_id="NP_707626.1"
/db_xref="GeneID:1024968"
/translation="MKIRSQVGMVLNLDKCIGCHTCSVTCNNVWTGREGMEYAWFNNV
ETKPGIGYPKNWEDQEEWQGGWVRDVNGKIRPRLGSKMGVITKIFANPVVPQQIDDYY
EPFTFDYEHLHSTPEGKHIPTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRN
FEAMQKEMYGQFENTFMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCR
GWRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYD
ADRIEEASSTEREVDLYRVGSLTAAACHGLQLPL"
misc_feature 1801546..>1802427
/locus_tag="SF1762"
/note="Nitrate reductase beta subunit [Energy production
and conversion, Inorganic ion transport and metabolism];
Region: NarY; COG1140"
/db_xref="CDD:440755"
mobile_element 1802425..1804253
/mobile_element_type="insertion sequence:IS91"
gene 1802456..1802878
/locus_tag="SF1763"
/db_xref="GeneID:1024929"
CDS 1802456..1802878
/locus_tag="SF1763"
/codon_start=1
/transl_table=11
/product="insertion sequence IS91 protein"
/protein_id="NP_707627.1"
/db_xref="GeneID:1024929"
/translation="MVCNYRYKNRQCHCLSGGYMARSAKPRKRKPASQRSKLPRYVVK
LHEDDFFDEEDAEVLRFDSFDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEI
ARCTEREFATILAGISAGGMYCPECGTVHWPDGVAPPF"
gene 1802878..1804065
/locus_tag="SF1764"
/db_xref="GeneID:1024928"
CDS 1802878..1804065
/locus_tag="SF1764"
/codon_start=1
/transl_table=11
/product="insertion sequence IS91 transposase"
/protein_id="NP_707628.1"
/db_xref="GeneID:1024928"
/translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVF
TLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHI
HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVMPDALAAEGSSKR
EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLR
YNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITE
TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
WCG"
misc_feature 1802890..1804005
/locus_tag="SF1764"
/note="IS91 family transposase; Region: transpos_IS91;
NF033538"
/db_xref="CDD:468069"
gene complement(1804336..1805058)
/locus_tag="SF1765"
/db_xref="GeneID:1025010"
CDS complement(1804336..1805058)
/locus_tag="SF1765"
/note="Code: K; COG: COG1802"
/codon_start=1
/transl_table=11
/product="colanic acid/biofilm transcriptional regulator"
/protein_id="NP_707629.1"
/db_xref="GeneID:1025010"
/translation="MNSFCHAGRVGQKTREGIKMPGTGKMKHVSLTLQVENDLKHQLS
IGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQAFTVPEVRQSQLD
EINRIRYELELMAVALAVENLSSQDIAELQELLGKLQQAQEKGDMEQIINVNRLFRLA
IYHRSNMPILCEMIEQLWIRMGPALHYLYEAINPAELRERIENYHLLLAALKAKDKEG
CKHCLAEIMQQNIAILYQQYNR"
misc_feature complement(1804339..1805001)
/locus_tag="SF1765"
/note="GntR family transcriptional regulator; Region:
PRK11414"
/db_xref="CDD:183126"
gene complement(1805163..1806359)
/gene="yncB"
/locus_tag="SF1766"
/db_xref="GeneID:1024921"
CDS complement(1805163..1806359)
/gene="yncB"
/locus_tag="SF1766"
/note="Code: R; COG: COG2130"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_707630.1"
/db_xref="GeneID:1024921"
/translation="MLQRGCDGCKQNQSREPATIDGFMPKAQESIMGQQKQRNRRWVL
PSRPHGAPVPENFRLEEDDVATPGEGQVLLRTVYLSLDPYMRGRMSDEPSYSPPVDIG
GVMVGGTVSRVVESNHPDYQPGDWVLGYSGWQDYDISSGDDLVKLGDHPQNPSWSLGV
LGMPGFTAYMGLLDIGQPKEGETLVVAAATEPVGATVGQIGKLKGCRVVGVAGGAEKC
RHATEVLGFDVCLDHHADDFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNTSARIP
VCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQKEMGQWV
KEDKIHYREDITDGLENAPQTFIGLLKGKNFGKVVIRVAGDDKSFNGGVSRHKNPGKK
LIFSFN"
misc_feature complement(1805244..1806245)
/gene="yncB"
/locus_tag="SF1766"
/note="NADPH-dependent curcumin reductase CurA [Secondary
metabolites biosynthesis, transport and catabolism,
General function prediction only]; Region: CurA; COG2130"
/db_xref="CDD:441733"
mobile_element complement(1806385..1807715)
/mobile_element_type="insertion sequence:IS2"
gene complement(1806396..1807301)
/locus_tag="SF1767"
/db_xref="GeneID:1024927"
CDS complement(1806396..1807301)
/locus_tag="SF1767"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707631.1"
/db_xref="GeneID:1024927"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREVLHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(1806399..1807301)
/locus_tag="SF1767"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(1807259..1807669)
/locus_tag="SF1768"
/db_xref="GeneID:1024966"
CDS complement(1807259..1807669)
/locus_tag="SF1768"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707632.3"
/db_xref="GeneID:1024966"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMKNELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(1807262..1807624)
/locus_tag="SF1768"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 1807783..1808301
/locus_tag="SF1769"
/db_xref="GeneID:1024956"
CDS 1807783..1808301
/locus_tag="SF1769"
/note="Code: M; COG: COG1247"
/codon_start=1
/transl_table=11
/product="resistance protein"
/protein_id="NP_707633.2"
/db_xref="GeneID:1024956"
/translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
RLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGHWLDLTFMQL
QLDERTEPDAIG"
misc_feature 1807783..1808268
/locus_tag="SF1769"
/note="L-amino acid N-acyltransferase MnaT [Amino acid
transport and metabolism]; Region: MnaT; COG1247"
/db_xref="CDD:440860"
gene 1808298..1808747
/locus_tag="SF1770"
/db_xref="GeneID:1024967"
CDS 1808298..1808747
/locus_tag="SF1770"
/note="Code: S; COG: COG3238"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707634.1"
/db_xref="GeneID:1024967"
/translation="MNQSLTLAFLIAAGIGLVVQNTLMARITQTSSTILIAMLLNSLV
GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
LVASQLIGGLVLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF"
misc_feature 1808310..1808726
/locus_tag="SF1770"
/note="Putative inner membrane exporter, YdcZ; Region:
DMT_YdcZ; pfam04657"
/db_xref="CDD:428052"
gene complement(1808748..1808981)
/locus_tag="SF1771"
/db_xref="GeneID:1024926"
CDS complement(1808748..1808981)
/locus_tag="SF1771"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707635.1"
/db_xref="GeneID:1024926"
/translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
misc_feature complement(1808754..1808981)
/locus_tag="SF1771"
/note="Protein of unknown function (DUF2526); Region:
DUF2526; pfam10735"
/db_xref="CDD:402390"
gene complement(1809067..1809315)
/locus_tag="SF1772"
/db_xref="GeneID:1024962"
CDS complement(1809067..1809315)
/locus_tag="SF1772"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707636.1"
/db_xref="GeneID:1024962"
/translation="MKKLDARQKMAHICARFIHMAGRPYMFLYQHMLVFYAVMAAIAF
LITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFSLF"
misc_feature complement(1809070..1809231)
/locus_tag="SF1772"
/note="Toxin GhoT_OrtT; Region: Toxin_GhoT_OrtT;
pfam10753"
/db_xref="CDD:431472"
gene complement(1809932..1810741)
/locus_tag="SF1773"
/db_xref="GeneID:1024932"
CDS complement(1809932..1810741)
/locus_tag="SF1773"
/codon_start=1
/transl_table=11
/product="acetyltransferase"
/protein_id="NP_707637.1"
/db_xref="GeneID:1024932"
/translation="MKVQLYKFTEDKNKTLTFRWTKKHFEFCMDNKIFLNHKGKKSYK
ERNLFLFSKGDKITIEDNVIAEEYSTMPVKNFSSVGAFSFPTCHFSGNIRIGRFCSIA
SNVKIMGGNHPLNRFTTHMMTYNGEFDKFAMSEFERSWTLKPFITKPENPIIGNDVWI
GNDVVLKGGIAIGDGAVIAANSVVTKDVPPYAIVAGVPAKIIRFRFDSNVIDELLRIK
WWNYNYSDLPDNNKCDDINYFVEEMNRLISNGNIQERDYKKFNLSEVFRGL"
misc_feature complement(1810076..1810516)
/locus_tag="SF1773"
/note="Xenobiotic acyltransferase (XAT): The XAT class of
hexapeptide acyltransferases is composed of a large number
of microbial enzymes that catalyze the CoA-dependent
acetylation of a variety of hydroxyl-bearing acceptors
such as chloramphenicol and...; Region: LbH_XAT; cd03349"
/db_xref="CDD:100040"
misc_feature complement(order(1810127..1810129,1810151..1810153,
1810199..1810201,1810256..1810258,1810265..1810267,
1810271..1810273,1810376..1810378,1810382..1810384,
1810388..1810390,1810403..1810408,1810442..1810444,
1810490..1810492,1810496..1810498))
/locus_tag="SF1773"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:100040"
misc_feature complement(order(1810136..1810138,1810148..1810150,
1810154..1810159,1810163..1810165,1810187..1810189,
1810202..1810207,1810256..1810258,1810265..1810267,
1810370..1810375,1810400..1810402,1810406..1810411,
1810484..1810486,1810490..1810492))
/locus_tag="SF1773"
/note="active site"
/db_xref="CDD:100040"
misc_feature complement(order(1810370..1810375,1810409..1810411,
1810484..1810486,1810490..1810492))
/locus_tag="SF1773"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100040"
misc_feature complement(order(1810136..1810138,1810148..1810150,
1810154..1810159,1810163..1810165,1810187..1810189,
1810202..1810207,1810241..1810243,1810256..1810258,
1810265..1810267,1810298..1810300,1810400..1810402,
1810406..1810408))
/locus_tag="SF1773"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100040"
gene complement(1810951..1812375)
/locus_tag="SF1774"
/db_xref="GeneID:1024951"
CDS complement(1810951..1812375)
/locus_tag="SF1774"
/note="Code: C; COG: COG1012"
/codon_start=1
/transl_table=11
/product="gamma-aminobutyraldehyde dehydrogenase"
/protein_id="NP_707638.1"
/db_xref="GeneID:1024951"
/translation="MQHKLLINGERVSGEGEKQPVYNPATGDVLLEIAEVSAEQVDAA
VRAADAAFAEWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIP
AIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA
PALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVINILFGRGKTVGDPLTGHPKVR
MVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNA
GQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKA
VEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE
EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLS
GYGKDMSLYGLEDYTVVRHVMVKH"
misc_feature complement(1810957..1812372)
/locus_tag="SF1774"
/note="NAD(P)+-dependent aldehyde dehydrogenase
superfamily; Region: ALDH-SF; cl11961"
/db_xref="CDD:448367"
misc_feature complement(order(1810960..1810977,1811014..1811016,
1811029..1811034,1811047..1811055,1811080..1811097,
1811101..1811103,1811110..1811112,1811116..1811121,
1811128..1811142,1811635..1811637,1811656..1811658,
1811677..1811679,1811686..1811688,1811722..1811724,
1811971..1811976,1811992..1811994,1811998..1812003,
1812007..1812018,1812028..1812030,1812058..1812060,
1812199..1812201))
/locus_tag="SF1774"
/note="tetrameric interface [polypeptide binding]; other
site"
/db_xref="CDD:143411"
misc_feature complement(order(1811242..1811244,1811395..1811397,
1811536..1811538,1811632..1811634,1811638..1811640,
1811683..1811685,1811692..1811694,1811701..1811709,
1811749..1811751,1811764..1811766,1811851..1811856,
1811860..1811862,1811932..1811934,1811938..1811943))
/locus_tag="SF1774"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:143411"
misc_feature complement(order(1811536..1811538,1811545..1811547,
1811638..1811640,1811929..1811931))
/locus_tag="SF1774"
/note="catalytic residues [active]"
/db_xref="CDD:143411"
misc_feature complement(order(1811062..1811064,1811539..1811541))
/locus_tag="SF1774"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143411"
gene complement(1812397..1813191)
/locus_tag="SF1775"
/db_xref="GeneID:1024955"
CDS complement(1812397..1813191)
/locus_tag="SF1775"
/note="Code: E; COG: COG1177"
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="NP_707639.1"
/db_xref="GeneID:1024955"
/translation="MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPP
QGLTLRWFSVAAQRSDILDAVTLSLKVAALATLIALVLGTLAAAALWRRDFFGKNAIS
LLLLLPIALPGIVTGLALLTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTS
WSLVEASMDLGANGWQTFRYVVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTL
PLWLLNQLGRPRDVPVTNVVALLVMLVTTLPILGAWWLTREGDNGQ"
misc_feature complement(1812409..1813179)
/locus_tag="SF1775"
/note="ABC-type spermidine/putrescine transport system,
permease component II [Amino acid transport and
metabolism]; Region: PotC; COG1177"
/db_xref="CDD:440790"
gene complement(1813181..1813528)
/locus_tag="SF1776"
/pseudo
/db_xref="GeneID:1024961"
misc_feature complement(1813181..1813528)
/locus_tag="SF1776"
/note="Similar to Escherichia coli K12 transport system
permease gi: 1787713 (314 aa). BLAST with identity of 100%
in 115 aa. This CDS has been truncated. The sequence has
been checked and is believed to be correct."
/pseudo
mobile_element 1813529..1813654
/note="partial"
/mobile_element_type="insertion sequence:IS91"
mobile_element 1813662..1813972
/note="partial"
/mobile_element_type="insertion sequence:IS1294"
gene 1813871..1815217
/locus_tag="SF1777"
/db_xref="GeneID:1024917"
CDS 1813871..1815217
/locus_tag="SF1777"
/codon_start=1
/transl_table=11
/product="insertion sequence IS91 transposase"
/protein_id="NP_707640.1"
/db_xref="GeneID:1024917"
/translation="MQREKTPEWREKQKSSRGIRRGQRYRLVFQFPIRVLPGVWHGSL
AGRSRPALLMLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTTLMGYT
QWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPYCPWQHIVFTLPCQ
YWSLVFHNRWLLAEMSRIAADVILEICHQADVEPGIFTVIHTWGRDQQWHPHIHLSTT
AGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVMPDALAAEGSSKREWNRF
LDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHR
TKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITETVRKT
AMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMRWCG"
misc_feature 1814042..1815157
/locus_tag="SF1777"
/note="IS91 family transposase; Region: transpos_IS91;
NF033538"
/db_xref="CDD:468069"
mobile_element 1813972..1815405
/note="partial"
/mobile_element_type="insertion sequence:IS91"
gene complement(1815406..1816298)
/locus_tag="SF1778"
/pseudo
/db_xref="GeneID:1024969"
misc_feature complement(1815406..1816298)
/locus_tag="SF1778"
/note="Similar to Escherichia coli K12 virulence protein
gi: 1787702 (403 aa). BLAST with identity of 98% in 297
aa. This CDS has been truncated. The sequence has been
checked and is believed to be correct."
/pseudo
gene 1816306..1816812
/locus_tag="SF1778a"
/pseudogene="unknown"
/db_xref="GeneID:16608330"
gene complement(1816781..1817487)
/locus_tag="SF1779"
/pseudogene="unknown"
/db_xref="GeneID:1024965"
gene complement(1817790..1818383)
/gene="tehB"
/locus_tag="SF1780"
/db_xref="GeneID:1024948"
CDS complement(1817790..1818383)
/gene="tehB"
/locus_tag="SF1780"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="tellurite resistance protein TehB"
/protein_id="NP_707642.1"
/db_xref="GeneID:1024948"
/translation="MNIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDGQYDFILST
VVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFTFAFKEGELRRYY
EGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK"
misc_feature complement(1817796..1818383)
/gene="tehB"
/locus_tag="SF1780"
/note="tellurite resistance methyltransferase TehB;
Region: PRK11207"
/db_xref="CDD:183040"
gene complement(1818380..1819372)
/gene="tehA"
/locus_tag="SF1781"
/db_xref="GeneID:1024945"
CDS complement(1818380..1819372)
/gene="tehA"
/locus_tag="SF1781"
/note="Code: P; COG: COG1275"
/codon_start=1
/transl_table=11
/product="potassium-tellurite ethidium and proflavin
transporter"
/protein_id="NP_707643.2"
/db_xref="GeneID:1024945"
/translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
VILAMIIWGLLTSAFITRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFR
PLAVCMFSFGVVVQLAYAAWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALG
YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV
NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS
GSDNGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE"
misc_feature complement(1818401..1819372)
/gene="tehA"
/locus_tag="SF1781"
/note="potassium-tellurite ethidium and proflavin
transporter; Provisional; Region: PRK10764"
/db_xref="CDD:236756"
misc_feature complement(1818587..1818589)
/gene="tehA"
/locus_tag="SF1781"
/note="gating phenylalanine in ion channel; other site"
/db_xref="CDD:187764"
gene 1819496..1820476
/locus_tag="SF1782"
/db_xref="GeneID:1024963"
CDS 1819496..1820476
/locus_tag="SF1782"
/note="Code: M; COG: COG1044"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707644.1"
/db_xref="GeneID:1024963"
/translation="MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAISDFNDVIAGTAG
GWIDRETVLAQEGNCWIYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSE
ISQGAYISDSVTIHDSLVYVQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKA
GIEEDAIPTIHYSSQVAEYAIVEGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESR
ITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRTPLAGLL"
misc_feature 1819496..1820473
/locus_tag="SF1782"
/note="YdcK family protein; Region: YdcK_fam; NF040481"
/db_xref="CDD:439707"
gene complement(1820471..1821007)
/gene="rimL"
/locus_tag="SF1783"
/db_xref="GeneID:1024954"
CDS complement(1820471..1821007)
/gene="rimL"
/locus_tag="SF1783"
/note="Code: J; COG: COG1670"
/codon_start=1
/transl_table=11
/product="ribosomal-protein-L7/L12-serine
acetyltransferase"
/protein_id="NP_707645.2"
/db_xref="GeneID:1024954"
/translation="MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQF
VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
SHQGQGIISQALQTLIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
FLNDAYDDVNLYARIIDS"
misc_feature complement(1820474..1821007)
/gene="rimL"
/locus_tag="SF1783"
/note="50S ribosomal protein L7/L12-serine
acetyltransferase; Region: PRK10151"
/db_xref="CDD:182270"
misc_feature complement(order(1820675..1820680,1820708..1820713))
/gene="rimL"
/locus_tag="SF1783"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(1821070..1821237)
/gene="ydcH"
/locus_tag="SF1784"
/db_xref="GeneID:1024958"
CDS complement(1821070..1821237)
/gene="ydcH"
/locus_tag="SF1784"
/note="Code: S; COG: COG2841"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707646.2"
/db_xref="GeneID:1024958"
/translation="MSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEML
KILQQESVKEV"
misc_feature complement(1821073..>1821237)
/gene="ydcH"
/locus_tag="SF1784"
/note="hypothetical protein; Provisional; Region:
PRK11415"
/db_xref="CDD:183127"
gene complement(1821434..1823089)
/gene="mdoD"
/locus_tag="SF1786"
/db_xref="GeneID:1024950"
CDS complement(1821434..1823089)
/gene="mdoD"
/locus_tag="SF1786"
/note="Code: P; COG: COG3131"
/codon_start=1
/transl_table=11
/product="glucan biosynthesis protein D"
/protein_id="NP_707648.1"
/db_xref="GeneID:1024950"
/translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGISP
MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC
FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS"
misc_feature complement(1821500..1822957)
/gene="mdoD"
/locus_tag="SF1786"
/note="glucan biosynthesis protein D; Provisional; Region:
mdoD; PRK13273"
/db_xref="CDD:237327"
gene complement(1823314..1824657)
/locus_tag="SF1787"
/db_xref="GeneID:1026467"
CDS complement(1823314..1824657)
/locus_tag="SF1787"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707649.1"
/db_xref="GeneID:1026467"
/translation="MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVL
ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
GVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
QLLEEYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFP
GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP
DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVS
AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL"
misc_feature complement(1823719..1824636)
/locus_tag="SF1787"
/note="uncharacterized metal-dependent enzyme similar to
Shigella flexneri YdcJ; Region: VOC_YdcJ_like; cd16348"
/db_xref="CDD:319958"
misc_feature complement(1823326..1823883)
/locus_tag="SF1787"
/note="Uncharacterized metalloenzyme YdcJ, glyoxalase
superfamily [General function prediction only]; Region:
YdcJ; COG5383"
/db_xref="CDD:444147"
gene 1824733..1825797
/locus_tag="SF1788"
/db_xref="GeneID:1024944"
CDS 1824733..1825797
/locus_tag="SF1788"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_707650.1"
/db_xref="GeneID:1024944"
/translation="MISPRKHQYYPFCCNIIALIVNNILQSSYHNQTTSLVSDTASFL
TSLMEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSNTLNELEQLTGA
RLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGQSLHRKEGLNNDVVRVGALPTAAL
GILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYEL
LFLESLKLVVRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSG
CIETLSTSLSRQLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVD
ATFSSGCQLMINAIRKSMPF"
misc_feature 1824898..1825779
/locus_tag="SF1788"
/note="Type 2 periplasmic binding fold superfamily;
Region: Periplasmic_Binding_Protein_Type_2; cl21456"
/db_xref="CDD:473866"
misc_feature order(1825222..1825227,1825231..1825236,1825243..1825245,
1825255..1825257,1825261..1825281,1825561..1825578,
1825594..1825599,1825603..1825608)
/locus_tag="SF1788"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176126"
gene complement(1825835..1827475)
/gene="trg"
/locus_tag="SF1789"
/db_xref="GeneID:1024960"
CDS complement(1825835..1827475)
/gene="trg"
/locus_tag="SF1789"
/note="Code: N; COG: COG0840"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis protein III"
/protein_id="NP_707651.1"
/db_xref="GeneID:1024960"
/translation="MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLW
QADRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESE
IKQSQQGYRAYQNRPVKTPADEAFDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHE
SEQIRPLDNAYTDILNKAVKIRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLIT
FMVLRRIVIRPLQHAAQRIEKIASGDLTMNDEPAGRNEIGRLSRHLQQMQHSLGMTVG
TVRQGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQTAASMEQLTATVKQNADNAHHA
SKLAQEASIKASDGGQTVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAV
EAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKTM
STIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAVS
LEEQAARLTEAVNVFRLNKHSVSAEPRGAGEPVSFATV"
misc_feature complement(1825850..1827442)
/gene="trg"
/locus_tag="SF1789"
/note="Methyl-accepting chemotaxis protein (MCP),
signaling domain; Region: MCP_signal; cl46910"
/db_xref="CDD:481250"
misc_feature complement(order(1825973..1825975,1825982..1825984,
1825991..1825996,1826003..1826005,1826012..1826017,
1826021..1826026,1826033..1826038,1826042..1826047,
1826054..1826056,1826063..1826068,1826075..1826077,
1826084..1826089,1826096..1826101,1826105..1826110,
1826117..1826119,1826126..1826131,1826138..1826140,
1826147..1826152,1826189..1826194,1826201..1826206,
1826210..1826215,1826222..1826227,1826234..1826236,
1826243..1826248,1826255..1826257,1826264..1826266,
1826276..1826278,1826297..1826299,1826306..1826308,
1826318..1826320,1826327..1826332,1826339..1826341,
1826348..1826350,1826357..1826362,1826369..1826374,
1826381..1826383,1826390..1826395,1826399..1826401,
1826411..1826416,1826420..1826425,1826432..1826434,
1826441..1826446,1826453..1826458,1826465..1826467,
1826474..1826479,1826486..1826488,1826495..1826500,
1826504..1826509,1826516..1826518,1826525..1826530,
1826537..1826542))
/gene="trg"
/locus_tag="SF1789"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature complement(1826231..1826332)
/gene="trg"
/locus_tag="SF1789"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
mobile_element 1827804..1828286
/note="partial"
/mobile_element_type="insertion sequence:IS150"
gene 1827851..1828333
/locus_tag="SF1790"
/db_xref="GeneID:1024957"
CDS 1827851..1828333
/locus_tag="SF1790"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion element IS150 protein"
/protein_id="NP_707652.1"
/db_xref="GeneID:1024957"
/translation="MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVA
LYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLK
VYEERGEAGLRALKIGTKRNIAISVDPEKAASALKLSKDRRIEVRCTGNSGHYHLFFF
"
misc_feature 1827875..>1828279
/locus_tag="SF1790"
/note="CRISPR-associated protein Csa3, CARF domain
[Defense mechanisms]; Region: Csa3; COG3415"
/db_xref="CDD:442641"
misc_feature 1827878..1828030
/locus_tag="SF1790"
/note="Helix-turn-helix domain; Region: HTH_28; pfam13518"
/db_xref="CDD:463908"
mobile_element complement(1828287..1829550)
/mobile_element_type="insertion sequence:IS600"
gene complement(1828330..1829148)
/locus_tag="SF1791"
/db_xref="GeneID:1023383"
CDS complement(1828330..1829148)
/locus_tag="SF1791"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707653.1"
/db_xref="GeneID:1023383"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(1828357..>1829148)
/locus_tag="SF1791"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1829184..1829486)
/locus_tag="SF1792"
/db_xref="GeneID:1024964"
CDS complement(1829184..1829486)
/locus_tag="SF1792"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="YP_008439253.1"
/db_xref="GeneID:1024964"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(1829214..1829486)
/locus_tag="SF1792"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 1829621..1829786
/note="partial"
/mobile_element_type="insertion sequence:IS150"
gene 1829861..1830010
/locus_tag="SF1792a"
/db_xref="GeneID:16608331"
CDS 1829861..1830010
/locus_tag="SF1792a"
/codon_start=1
/transl_table=11
/product="protein HokB"
/protein_id="YP_008439254.1"
/db_xref="GeneID:16608331"
/translation="MKRNPLVVCLLIICITILAFTLLTRQTLYELRFRDGDKEVAALM
ACTSR"
misc_feature 1829861..1830007
/locus_tag="SF1792a"
/note="small toxic polypeptide; Provisional; Region:
PRK09738"
/db_xref="CDD:182055"
gene complement(1830082..1830255)
/gene="ydcA"
/locus_tag="SF1793"
/db_xref="GeneID:1024949"
CDS complement(1830082..1830255)
/gene="ydcA"
/locus_tag="SF1793"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707655.1"
/db_xref="GeneID:1024949"
/translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN
DGSISASKKTCTN"
misc_feature complement(1830085..1830243)
/gene="ydcA"
/locus_tag="SF1793"
/note="hypothetical protein; Provisional; Region:
PRK10040"
/db_xref="CDD:182205"
gene complement(1830500..1831066)
/gene="cybB"
/locus_tag="SF1794"
/db_xref="GeneID:1025003"
CDS complement(1830500..1831066)
/gene="cybB"
/locus_tag="SF1794"
/note="Code: C; COG: COG3038"
/codon_start=1
/transl_table=11
/product="cytochrome b(561)"
/protein_id="NP_707656.3"
/db_xref="GeneID:1025003"
/translation="MLTENYVKAGNVMENKYSRLQISIHWLVFLLVIAAYCAMEFRGF
FPRSDRPLINMIHVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVI
YLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVI
GLHAAAALAHHYFWKDNTLLRMMPRKRS"
misc_feature complement(1830503..1831030)
/gene="cybB"
/locus_tag="SF1794"
/note="cytochrome b561; Provisional; Region: PRK11513"
/db_xref="CDD:236921"
gene 1831219..1831971
/locus_tag="SF1795"
/db_xref="GeneID:1024959"
CDS 1831219..1831971
/locus_tag="SF1795"
/note="Code: G; COG: COG0057"
/codon_start=1
/transl_table=11
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="NP_707657.1"
/db_xref="GeneID:1024959"
/translation="MSKVGINGFGRIGRLVLRRLLEVKSNIDVVAINDLTSPKILAYL
LKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTS
ADKSQAHLDAGAKKVLISAPAGEMKTIVYNVNDDTLDGNDTIVSVASCTTNCLAPMAK
ALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLV
IPELSGKLKGHAQRVPVKTGSVTELVSILGKK"
misc_feature 1831219..>1831968
/locus_tag="SF1795"
/note="Glyceraldehyde-3-phosphate
dehydrogenase/erythrose-4-phosphate dehydrogenase
[Carbohydrate transport and metabolism]; Region: GapA;
COG0057"
/db_xref="CDD:439827"
gene 1831968..1832219
/gene="gapC"
/locus_tag="SF1796"
/db_xref="GeneID:1024986"
CDS 1831968..1832219
/gene="gapC"
/locus_tag="SF1796"
/codon_start=1
/transl_table=11
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="NP_707658.1"
/db_xref="GeneID:1024986"
/translation="MTAEEVNNALKQATTNNESFGYTDEEIVSSDIIGSHFGSVFDAT
QTEITAVGDLQLVKTVAWYDNEYGFVTQLIRTLEKFAKL"
misc_feature <1831971..1832192
/gene="gapC"
/locus_tag="SF1796"
/note="glyceraldehyde-3-phosphate dehydrogenase, type I;
Region: GAPDH-I; TIGR01534"
/db_xref="CDD:273675"
gene complement(1832261..1833700)
/gene="aldA"
/locus_tag="SF1797"
/db_xref="GeneID:1024942"
CDS complement(1832261..1833700)
/gene="aldA"
/locus_tag="SF1797"
/note="Code: C; COG: COG1012"
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="NP_707659.1"
/db_xref="GeneID:1024942"
/translation="MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAE
DARKAIDAAERAQPEWEALPAIERASWLCKISAGIRERASEISALIVEEGGKIQQLAE
VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIA
RKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAG
NPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDS
RVINSGQVCNCAERVYVQKGIYDQFVNLLGEALQAVQFGNPAERNDIAMGPLINAAAL
ERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVV
AFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHA
GWRKSGIGGADGKHGLHEYLQTQVVYLQS"
misc_feature complement(1832264..1833487)
/gene="aldA"
/locus_tag="SF1797"
/note="aldehyde dehydrogenase A; Provisional; Region:
PRK10090"
/db_xref="CDD:182233"
misc_feature complement(order(1832693..1832695,1832705..1832707,
1832993..1832995,1833002..1833004,1833011..1833013,
1833020..1833022,1833059..1833064,1833074..1833076,
1833164..1833166,1833173..1833175,1833245..1833256))
/gene="aldA"
/locus_tag="SF1797"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:143407"
misc_feature complement(order(1832846..1832848,1832855..1832857,
1832948..1832950,1833242..1833244))
/gene="aldA"
/locus_tag="SF1797"
/note="catalytic residues [active]"
/db_xref="CDD:143407"
misc_feature complement(order(1832354..1832356,1832372..1832374,
1832843..1832848,1832948..1832950,1833218..1833220,
1833239..1833241))
/gene="aldA"
/locus_tag="SF1797"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143407"
gene complement(1833897..1834426)
/gene="ydcF"
/locus_tag="SF1798"
/pseudo
/db_xref="GeneID:1024991"
misc_feature complement(1833897..1834426)
/gene="ydcF"
/locus_tag="SF1798"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787683 (267 aa). BLAST with
identity of 98% in 176 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element 1834428..1834902
/note="partial"
/mobile_element_type="insertion sequence:IS600"
mobile_element 1834903..1836151
/mobile_element_type="insertion sequence:IS911"
gene 1834975..1835277
/locus_tag="SF1799"
/db_xref="GeneID:1026474"
CDS 1834975..1835277
/locus_tag="SF1799"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_707660.1"
/db_xref="GeneID:1026474"
/translation="MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVK
QLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR"
misc_feature 1834978..1835247
/locus_tag="SF1799"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1835304..1836143
/locus_tag="SF1800"
/db_xref="GeneID:1024984"
CDS 1835304..1836143
/locus_tag="SF1800"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_707661.1"
/db_xref="GeneID:1024984"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature 1835325..1836134
/locus_tag="SF1800"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
mobile_element 1836153..1836944
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 1836188..1836901
/locus_tag="SF1801"
/db_xref="GeneID:1025002"
CDS 1836188..1836901
/locus_tag="SF1801"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 integrase core
domain-containing protein"
/protein_id="NP_707662.1"
/db_xref="GeneID:1025002"
/translation="MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQ
KRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYT
CEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHS
RLGNISPAAFREKYHQMTA"
misc_feature <1836188..1836874
/locus_tag="SF1801"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1837102..1840947)
/gene="hrpA"
/locus_tag="SF1802"
/db_xref="GeneID:1024989"
CDS complement(1837102..1840947)
/gene="hrpA"
/locus_tag="SF1802"
/note="Code: L; COG: COG1643"
/codon_start=1
/transl_table=11
/product="ATP-dependent RNA helicase HrpA"
/protein_id="NP_707663.2"
/db_xref="GeneID:1024989"
/translation="MLRDRLRFSRRLHCVKKVKNPDAQQAIFQEMAKEIDQAAGKVLL
REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI
KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF
SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESPGDILI
FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET
SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL
YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL
EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI
QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY
LNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQE
YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK
RTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDSALCRELFIRHALVEGDW
QTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWW
KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT
VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVT
PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQD
LKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERD
SVTIKLFDNPLEQKQAMWNGLRRLLLLNISSPIKYLHEKLPNKAKLGLYFNPYGKVLE
LIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN
INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL
AVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLG
TPYPISDKRILQAMEQISG"
misc_feature complement(1837111..1840947)
/gene="hrpA"
/locus_tag="SF1802"
/note="ATP-dependent RNA helicase HrpA; Provisional;
Region: PRK11131"
/db_xref="CDD:182986"
gene 1841205..1841810
/gene="acpD"
/locus_tag="SF1803"
/db_xref="GeneID:1027790"
CDS 1841205..1841810
/gene="acpD"
/locus_tag="SF1803"
/note="Code: I; COG: COG1182"
/codon_start=1
/transl_table=11
/product="azoreductase"
/protein_id="NP_707664.1"
/db_xref="GeneID:1027790"
/translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWSEKHSADEITVRDLA
ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
misc_feature 1841205..1841807
/gene="acpD"
/locus_tag="SF1803"
/note="azoreductase; Reviewed; Region: PRK00170"
/db_xref="CDD:234675"
misc_feature complement(1841864..1844417)
/note="Similar to Escherichia coli K12 enzymes gi: 1787679
(431 aa). BLAST with identity of 98% in 850 aa. This CDS
has been disrupted by insertion. The sequence has been
checked and is believed to be correct."
gene complement(1841864..1842472)
/locus_tag="SF1803a"
/db_xref="GeneID:16608332"
CDS complement(1841864..1842472)
/locus_tag="SF1803a"
/codon_start=1
/transl_table=11
/product="phosphatase"
/protein_id="YP_008439255.1"
/db_xref="GeneID:16608332"
/translation="MMMVQLWWSVWLCWPVLSLLIIGRGCGGLGAITTGKDSQGKLPP
AVYWLTLPWRIGMWLSMRWFCRRLEPVSKMTAGVYLRAFPRHIPAQNAVLDVTFEFPR
GRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSALVVA
AWLLCYGHCKTVDEAIIFIRARRSHIVLKEEHKAMLKLWENR"
misc_feature complement(1841870..1842274)
/locus_tag="SF1803a"
/note="unknown subfamily of bacterial and plant dual
specificity protein phosphatases; Region: DSP_bac;
cd14527"
/db_xref="CDD:350376"
mobile_element 1842509..1843772
/mobile_element_type="insertion sequence:IS600"
gene 1842573..1842875
/locus_tag="SF1804"
/db_xref="GeneID:1024978"
CDS 1842573..1842875
/locus_tag="SF1804"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707665.1"
/db_xref="GeneID:1024978"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 1842573..1842845
/locus_tag="SF1804"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1842911..1843729
/locus_tag="SF1805"
/db_xref="GeneID:1024990"
CDS 1842911..1843729
/locus_tag="SF1805"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707666.1"
/db_xref="GeneID:1024990"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVVPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1842911..1843702
/locus_tag="SF1805"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1843770..1844480)
/locus_tag="SF1807"
/db_xref="GeneID:1024988"
CDS complement(1843770..1844480)
/locus_tag="SF1807"
/note="Code: I; COG: COG0671"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707667.1"
/db_xref="GeneID:1024988"
/translation="MCGAFLRFRWRCVVITERRNVLLQGAGWLLLLAPFFFFTYGSLN
QFTAVQDLNSHDIPSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSSTFEQRRLV
HRLILATVMACCGFFLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCW
LLWRHFRQHLAVRWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDR
RWNYQKLDQRRIKIALPY"
misc_feature complement(1843827..1844279)
/locus_tag="SF1807"
/note="PAP2_like proteins, Aur1_like subfamily. Yeast
Aur1p or Ipc1p is necessary for the addition of inositol
phosphate to ceramide, an essential step in yeast
sphingolipid synthesis, and is the target of several
antifungal compounds such as aureobasidin; Region:
PAP2_Aur1_like; cd03386"
/db_xref="CDD:239481"
misc_feature complement(order(1843884..1843886,1843896..1843898,
1843914..1843916,1844016..1844024,1844100..1844102,
1844124..1844126))
/locus_tag="SF1807"
/note="active site"
/db_xref="CDD:239481"
gene complement(1844431..1846188)
/locus_tag="SF1808"
/db_xref="GeneID:1024983"
CDS complement(1844431..1846188)
/locus_tag="SF1808"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707668.1"
/db_xref="GeneID:1024983"
/translation="MENSRIPGEHFFTTSDNTALYYRHWPTLQPGAKKVIVLFHRGHE
HSGRLQHLVDELAMPDTAFYAWDARGHGKNSGPRGYSPSLMRSVQDVDEFVRFAASDS
QVGLEEVVVIAQSVGAVLVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAI
TLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQ
SFICRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGA
HSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQ
ILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQE
MIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLAN
AIEPGGILIYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLVRNAGFDKCT
QRIDVWGIFTVSMAVRRDN"
misc_feature complement(1845394..1846095)
/locus_tag="SF1808"
/note="Serine aminopeptidase, S33; Region: Hydrolase_4;
pfam12146"
/db_xref="CDD:463473"
misc_feature complement(1844443..1845366)
/locus_tag="SF1808"
/note="Putative methyltransferase; Region:
Methyltransf_20; pfam12147"
/db_xref="CDD:432362"
misc_feature complement(order(1844728..1844730,1844785..1844793,
1844869..1844874,1844929..1844949))
/locus_tag="SF1808"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(1846204..1847099)
/locus_tag="SF1809"
/pseudo
/db_xref="GeneID:1024994"
gene complement(1847099..1847704)
/locus_tag="SF1810"
/db_xref="GeneID:1024985"
CDS complement(1847099..1847704)
/locus_tag="SF1810"
/note="Code: I; COG: COG0558"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707670.2"
/db_xref="GeneID:1024985"
/translation="MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLTALALSLFTGL
LLVLVAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALY
LPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGL
AVAIYPQWMQWNNLLWSIASILLICTAINRCRSVLLMSAER"
misc_feature complement(1847120..1847623)
/locus_tag="SF1810"
/note="Phosphatidylglycerophosphate synthase [Lipid
transport and metabolism]; Region: PgsA; COG0558"
/db_xref="CDD:440324"
gene complement(1847875..1850184)
/gene="ydbD"
/locus_tag="SF1811"
/db_xref="GeneID:1024973"
CDS complement(1847875..1850184)
/gene="ydbD"
/locus_tag="SF1811"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707671.3"
/db_xref="GeneID:1024973"
/translation="MSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQH
YQDKQQVEQAINSSVNLVPFGLSASDWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNI
STFSLSNPWVILGNVTATNIVTDSPLLITGSINASGLVFIDSYYDNPSTIKGSINARG
VFINDIIAPVVASSTNSEFMVRASDKNDTENVKKALMIINPDAYYWGLINDEDALKEI
FKRSNIRMAGNVCNQMKKEALFRPKPSPELVQELQMLDEGNVAAFEGRDIATFDLAIM
RTLPRLKGISANLRKQLINSNDEQTIESMARYMPDNEILELTDQQLGYQPVVLGLLDR
EPLSVEIMTRMSRLPDGVGPLNLALRENLPLDIVMTLAKRDWDMIIQELYKDAWLLPE
SIIDGYIRSDDSSIRQVGAGGQLTYNQAMQLANDSSNNVVTSLAFKLAEMKHHGQLLR
MTPQESDKVAAYLYQKFENDDDLIRVLFLALPDNLQFNFVKRMEKKSPAYFCCRDMQV
IHSDAALQRLLTRFNDPEGWSNLAKNQYLSTSMKQKIWQRALSHRKNNPKADSDAYET
SADMILSELISHGEVDDQMLLNAAALIRLEDWDFLESALVSWDNLPAVVLKELQQNTP
RNDIWAKFFLRQENSSRAQVDEALRVYYALDPDALAQLDVLAKQPDRIWWSTLAKSNL
TFFKFGALSNRHTPSAALAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELVNP
ELDLVRQLALNGKTRAIREQAMRKLDELY"
misc_feature complement(1849690..1849959)
/gene="ydbD"
/locus_tag="SF1811"
/note="Polymer-forming cytoskeletal; Region: Bactofilin;
pfam04519"
/db_xref="CDD:461340"
misc_feature complement(1847878..1848120)
/gene="ydbD"
/locus_tag="SF1811"
/note="Protein of unknown function (DUF2773); Region:
DUF2773; pfam10971"
/db_xref="CDD:287885"
mobile_element 1850049..1850816
/mobile_element_type="insertion sequence:IS1"
gene 1850298..1850801
/gene="insB"
/locus_tag="SF1812"
/db_xref="GeneID:1024998"
CDS 1850298..1850801
/gene="insB"
/locus_tag="SF1812"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707672.1"
/db_xref="GeneID:1024998"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 1850406..1850798
/gene="insB"
/locus_tag="SF1812"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1850795..1851139)
/gene="hslJ"
/locus_tag="SF1813"
/pseudo
/db_xref="GeneID:1025016"
misc_feature complement(1850795..1851139)
/gene="hslJ"
/locus_tag="SF1813"
/note="Similar to Escherichia coli K12 heat shock protein
hslJ ref: NP_415897.1 (140 aa). BLAST with identity of 99%
in 114 aa. This CDS has been truncated. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(1851238..1852227)
/gene="ldhA"
/locus_tag="SF1814"
/db_xref="GeneID:1024976"
CDS complement(1851238..1852227)
/gene="ldhA"
/locus_tag="SF1814"
/note="Code: CHR; COG: COG1052"
/codon_start=1
/transl_table=11
/product="fermentative D-lactate dehydrogenase"
/protein_id="NP_707673.1"
/db_xref="GeneID:1024976"
/translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
CEAVCIFVNDDGSHPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEA
AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
misc_feature complement(1851244..1852227)
/gene="ldhA"
/locus_tag="SF1814"
/note="D-Lactate and related Dehydrogenases, NAD-binding
and catalytic domains; Region: LDH_like_2; cd12183"
/db_xref="CDD:240659"
misc_feature complement(order(1851334..1851336,1851343..1851345,
1851526..1851528,1851928..1851930,1851994..1852002))
/gene="ldhA"
/locus_tag="SF1814"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:240659"
misc_feature complement(order(1851334..1851339,1851343..1851345,
1851451..1851456,1851526..1851534,1851586..1851588,
1851595..1851597,1851607..1851618,1851703..1851711,
1851760..1851771,1851775..1851777,1851913..1851915,
1851928..1851930))
/gene="ldhA"
/locus_tag="SF1814"
/note="putative NAD binding site [chemical binding]; other
site"
/db_xref="CDD:240659"
gene 1852435..1855074
/gene="ydbH"
/locus_tag="SF1815"
/db_xref="GeneID:1024979"
CDS 1852435..1855074
/gene="ydbH"
/locus_tag="SF1815"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707674.1"
/db_xref="GeneID:1024979"
/translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLADIWLPLGTRI
ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKL
PQTEQSPAAPKTLAQWQSMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
KVKFQGQLKGQQLTVSELDVVAFENQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWLYAGFPLS
GRLGVKVDNWQAGLENALVSGRLNVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG
EAKQADLILYARLPAQLSGSLSDPTLTFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV
TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
SLDAGQTLFTGGSVLPPSTLKFSVDGRNPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
SGALPLWLNNEKWIVKDGWLANSGLMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
RSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQA
WLEQNARLPGNDCPQGKECEEKQ"
misc_feature 1852504..1855020
/gene="ydbH"
/locus_tag="SF1815"
/note="YdbH family protein; Region: PRK10695"
/db_xref="CDD:182654"
gene 1855071..1855256
/gene="ynbE"
/locus_tag="SF1816"
/db_xref="GeneID:1024972"
CDS 1855071..1855256
/gene="ynbE"
/locus_tag="SF1816"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707675.1"
/db_xref="GeneID:1024972"
/translation="MKILLAALTSSFMLVGCTPRIEVAAPKEPITINMNVKIEHEIII
KADKDVEELLETRSDLF"
misc_feature 1855146..1855247
/gene="ynbE"
/locus_tag="SF1816"
/note="YnbE-like lipoprotein; Region: Lipoprotein_19;
pfam13617"
/db_xref="CDD:463935"
gene 1855261..1855590
/gene="ydbL"
/locus_tag="SF1817"
/db_xref="GeneID:1024970"
CDS 1855261..1855590
/gene="ydbL"
/locus_tag="SF1817"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707676.2"
/db_xref="GeneID:1024970"
/translation="MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVA
LKTDAETEKLVTEINAERKASYQQRAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGIN
GKWVRKF"
misc_feature 1855264..1855584
/gene="ydbL"
/locus_tag="SF1817"
/note="Uncharacterized conserved protein YdbL, DUF1318
family [Function unknown]; Region: YdbL; COG3784"
/db_xref="CDD:442998"
mobile_element 1855987..1856754
/mobile_element_type="insertion sequence:IS1"
gene 1856042..1856317
/gene="insA"
/locus_tag="SF1818"
/db_xref="GeneID:1024975"
CDS 1856042..1856317
/gene="insA"
/locus_tag="SF1818"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707677.1"
/db_xref="GeneID:1024975"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1856063..>1856314
/gene="insA"
/locus_tag="SF1818"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1856344..1856739
/gene="insB"
/locus_tag="SF1819"
/db_xref="GeneID:1024982"
CDS 1856344..1856739
/gene="insB"
/locus_tag="SF1819"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707678.1"
/db_xref="GeneID:1024982"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1856347..1856736
/gene="insB"
/locus_tag="SF1819"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 1856755..1856875
/gene="hslJ"
/locus_tag="SF1820"
/pseudo
/db_xref="GeneID:1025618"
misc_feature 1856755..1856875
/gene="hslJ"
/locus_tag="SF1820"
/note="Similar to Escherichia coli K12 heat shock protein
hslJ gi: 1787644 (141 aa). BLAST with identity of 99% in
40 aa. This CDS has been truncated. The sequence has been
checked and is believed to be correct."
/pseudo
gene complement(1856872..1857234)
/locus_tag="SF1821"
/db_xref="GeneID:1024997"
CDS complement(1856872..1857234)
/locus_tag="SF1821"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707679.1"
/db_xref="GeneID:1024997"
/translation="MRGNAQDSSRRRPLCCLLFMAVSFGLKIRGRRDASSVLGRCAAL
LLSACSSEPVQQATAAHVAPSLKASMSSSGEANCAMIGGSLSVARQLDGTAIGMCALP
NGKRCSEQSLAAGSCGSY"
misc_feature complement(1856881..1857135)
/locus_tag="SF1821"
/note="Putative hemolysin [General function prediction
only]; Region: Hlx; COG3042"
/db_xref="CDD:442276"
gene 1857411..1860935
/gene="ydbK"
/locus_tag="SF1822"
/db_xref="GeneID:1025019"
CDS 1857411..1860935
/gene="ydbK"
/locus_tag="SF1822"
/codon_start=1
/transl_table=11
/product="oxidoreductase, Fe-S subunit"
/protein_id="NP_707680.1"
/db_xref="GeneID:1025019"
/translation="MITIDGNGAVASVTFRISEVIAIYPITPSSTMAEQADAWAGNGL
KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
DTYFQSREATNPWYNAVYDHVEQAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAI
GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAE
PLYLDVMTALAEAFNNGERETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF
TVGIYDDVTNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPSG
IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
FHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEVPLQPVNPHS
ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRQEHVEEEKINYDFFLNLPEIDRSKL
ERIDIRTSQLITPLFEYSGACPGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
TATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQPEVAEQL
WKDAAANLQKRYDFLAQMAGKAEKSNTD"
misc_feature 1857411..1860908
/gene="ydbK"
/locus_tag="SF1822"
/note="pyruvate:ferredoxin (flavodoxin) oxidoreductase,
homodimeric; Region: pyruv_ox_red; TIGR02176"
/db_xref="CDD:131231"
gene 1861302..1862411
/locus_tag="SF1823"
/pseudogene="unknown"
/db_xref="GeneID:1025028"
gene 1862500..1863006
/gene="ynaF"
/locus_tag="SF1824"
/db_xref="GeneID:1026482"
CDS 1862500..1863006
/gene="ynaF"
/locus_tag="SF1824"
/note="Code: T; COG: COG0589"
/codon_start=1
/transl_table=11
/product="universal stress protein F"
/protein_id="NP_707682.2"
/db_xref="GeneID:1026482"
/translation="MNSVITQKVSSGVTLYADTKTGGFMNRTILVPIDISDSELTQRV
ISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKK
FKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHA
ECSVLVVR"
misc_feature 1862572..1863003
/gene="ynaF"
/locus_tag="SF1824"
/note="universal stress protein UspF; Region: PRK15005"
/db_xref="CDD:184967"
gene 1863182..1864117
/gene="ydaO"
/locus_tag="SF1825"
/db_xref="GeneID:1025014"
CDS 1863182..1864117
/gene="ydaO"
/locus_tag="SF1825"
/note="Code: D; COG: COG0037"
/codon_start=1
/transl_table=11
/product="tRNA 2-thiocytidine biosynthesis protein TtcA"
/protein_id="NP_707683.1"
/db_xref="GeneID:1025014"
/translation="MSQNQEISKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKI
VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGTTKIALGHHRDDILQTLFL
NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGD
LAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK"
misc_feature 1863212..1863985
/gene="ydaO"
/locus_tag="SF1825"
/note="tRNA 2-thiocytidine biosynthesis protein TtcA;
Provisional; Region: PRK10696"
/db_xref="CDD:236737"
gene complement(1864246..1865613)
/gene="dbpA"
/locus_tag="SF1826"
/db_xref="GeneID:1024971"
CDS complement(1864246..1865613)
/gene="dbpA"
/locus_tag="SF1826"
/note="Code: LKJ; COG: COG0513"
/codon_start=1
/transl_table=11
/product="ATP-dependent RNA helicase DbpA"
/protein_id="NP_707684.2"
/db_xref="GeneID:1024971"
/translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR
VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQ
QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLE
QRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAG
NSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVTLEAEMATLCIDGGKKAK
MRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCR
VRLLK"
misc_feature complement(1864249..1865613)
/gene="dbpA"
/locus_tag="SF1826"
/note="ATP-dependent RNA helicase DbpA; Provisional;
Region: PRK11776"
/db_xref="CDD:236977"
gene complement(1866091..1867074)
/gene="zntB"
/locus_tag="SF1827"
/db_xref="GeneID:1024977"
CDS complement(1866091..1867074)
/gene="zntB"
/locus_tag="SF1827"
/note="Code: P; COG: COG0598"
/codon_start=1
/transl_table=11
/product="zinc transporter"
/protein_id="NP_707685.1"
/db_xref="GeneID:1024977"
/translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRFGEGTLITLRCINGSTDERPD
QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
misc_feature complement(1866094..1867065)
/gene="zntB"
/locus_tag="SF1827"
/note="zinc transporter ZntB; Region: zntB; PRK09546"
/db_xref="CDD:181941"
misc_feature complement(order(1866382..1866384,1866448..1866450,
1866457..1866462,1866604..1866606,1866613..1866615,
1866697..1866702,1866706..1866717,1866757..1866762,
1866802..1866804,1866808..1866810,1866844..1866852,
1866934..1866936,1866943..1866945))
/gene="zntB"
/locus_tag="SF1827"
/note="Cl binding site [ion binding]; other site"
/db_xref="CDD:213367"
misc_feature complement(order(1866106..1866108,1866115..1866117,
1866151..1866156,1866163..1866168,1866202..1866225,
1866229..1866246,1866250..1866258,1866262..1866300,
1866304..1866327,1866334..1866342,1866346..1866351,
1866355..1866360,1866367..1866372,1866376..1866381,
1866388..1866393,1866397..1866402,1866433..1866438,
1866445..1866450,1866457..1866462,1866466..1866468,
1866478..1866483,1866487..1866492,1866499..1866504,
1866511..1866516,1866520..1866525,1866556..1866558,
1866565..1866570,1866574..1866579,1866586..1866588,
1866595..1866600,1866607..1866609,1866619..1866621,
1866631..1866633,1866640..1866642,1866676..1866678,
1866688..1866690,1866835..1866837,1866841..1866843,
1866871..1866876,1866883..1866885))
/gene="zntB"
/locus_tag="SF1827"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:213367"
gene 1867269..1868561
/locus_tag="SF1828"
/pseudo
/db_xref="GeneID:1025018"
misc_feature 1867269..1868561
/locus_tag="SF1828"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787603 (431 aa). BLAST with
identity of 98% in 431 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1868582..1869145)
/gene="ydaL"
/locus_tag="SF1829"
/pseudo
/db_xref="GeneID:1024999"
misc_feature complement(1868582..1869145)
/gene="ydaL"
/locus_tag="SF1829"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1787602 (188 aa). BLAST with
identity of 98% in 187 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1869399..1870853)
/locus_tag="SF1830"
/db_xref="GeneID:1025012"
CDS complement(1869399..1870853)
/locus_tag="SF1830"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="multidrug resistant protein-like protein"
/protein_id="NP_707686.1"
/db_xref="GeneID:1025012"
/translation="MMSMRKHIAFASMCMGLFIAQLDIQIVSSSLNEIGGGLSAGKDE
MAWLQTSYLIAEIIVIPLSGWLSRVFSTRWLFTLSAGIFTLMSIACGLAWNIQIMILF
RALQGAAGASMIPLVFTMAFIYYQGKELGLAAAVVSALASLSPTLGPTLGGWLTDNLD
WRWLFYINILPGIYLVLSIPFLVNFDKPDLSLLKVADYPSIILLAMTLGCLEYTLEEG
ARWGWLDDNTILLTSVLALVSFILFAARTLTISNPIMDLHAFKDKNFTLGCFFSFSGG
VGIFSTVYLIPVFLGQIRGLNAEEIGFAVCTTGIFQLFSVPFYFWLSKKINLRWLLMA
GLGGFVFSMYLFTPITHEWGWQELLFPQAIRGISQQFAMAPIVTLTLGGIPKERLKLA
SGVFNLTRNLGGAIGIALCGSILNNRTNFHFSRMGEKMVSVPHTVNDFISRSALFFNR
SRSDQTSEILASTKLLSQLMLREAQTMAFSVPFC"
misc_feature complement(1869405..1870832)
/locus_tag="SF1830"
/note="drug resistance transporter, EmrB/QacA subfamily;
Region: efflux_EmrB; TIGR00711"
/db_xref="CDD:129794"
misc_feature complement(1870850..1873569)
/note="Similar to Mesorhizobium loti probable secretion
protein ref: NP_103897.1 (367 aa). BLAST with identity of
46% in 906 aa. This CDS has been disrupted by insertion.
The sequence has been checked and is believed to be
correct."
gene 1871358..1871546
/locus_tag="SF1831"
/db_xref="GeneID:1025011"
CDS 1871358..1871546
/locus_tag="SF1831"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707687.1"
/db_xref="GeneID:1025011"
/translation="MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASI
LERRGDTAALTRLQDTGG"
gene 1871556..1872755
/locus_tag="SF1832"
/db_xref="GeneID:1025020"
CDS 1871556..1872755
/locus_tag="SF1832"
/codon_start=1
/transl_table=11
/product="IS1294 transposase"
/protein_id="NP_707688.1"
/db_xref="GeneID:1025020"
/translation="MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACG
TRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHL
VFTLPDTQWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
HVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQRLLKAWSEGLAMPESLSHITT
ESQRRSLVLKAGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLS
FRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRA
LGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDIS
LLRYMPA"
misc_feature 1871583..1872692
/locus_tag="SF1832"
/note="IS91 family transposase; Region: transpos_IS91;
NF033538"
/db_xref="CDD:468069"
mobile_element 1871574..1872926
/note="partial"
/mobile_element_type="insertion sequence:IS1294"
gene 1873663..1874478
/locus_tag="SF1834"
/db_xref="GeneID:1025001"
CDS 1873663..1874478
/locus_tag="SF1834"
/note="Code: K; COG: COG2207"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707689.3"
/db_xref="GeneID:1025001"
/translation="MTITLQPKASPGHHIIGLDSEHLNGGTVPWHKHLYAQLLYPAEG
VVRVWAGESVWLVHASSALWLPPQMPHKFVATGNVLLKTVLVSEAESETLGTVCFMTG
ISPLLRELLIAINQLPPSQSTTDKQQLRFSALETLILQEIKMGVKMSLELPWPNDERL
QQLCENLLNNQGYLPTLDNLADKINVSSRTLMRLFVKETGLTFRHWVQQMHVISAVTL
LDDGYSLTKIAHRLGYASAESFGNMFKRRTGYSPGKFTRRLTMHNYAITRQMI"
misc_feature 1873693..1874439
/locus_tag="SF1834"
/note="AraC-type DNA-binding domain and AraC-containing
proteins [Transcription]; Region: AraC; COG2207"
/db_xref="CDD:441809"
misc_feature 1874200..1874436
/locus_tag="SF1834"
/note="Helix-turn-helix domain; Region: HTH_18; pfam12833"
/db_xref="CDD:432818"
gene 1874808..1875011
/locus_tag="SF1834a"
/db_xref="GeneID:16608333"
CDS 1874808..1875011
/locus_tag="SF1834a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439256.1"
/db_xref="GeneID:16608333"
/translation="MPSFLQAEKLKNRFMLSDCDKPDAKLGTYYSLVLPYPLIFLVVW
LLMLLAWYLVGLPIGQGIYPRLS"
misc_feature <1874868..1875008
/locus_tag="SF1834a"
/note="Anion permease ArsB/NhaD. These permeases have been
shown to translocate sodium, arsenate, antimonite, sulfate
and organic anions across biological membranes in all
three kingdoms of life. A typical anion permease contains
8-13 transmembrane helices...; Region: ArsB_NhaD_permease;
cl21473"
/db_xref="CDD:473875"
gene 1875022..1875537
/gene="ogt"
/locus_tag="SF1835"
/db_xref="GeneID:1025017"
CDS 1875022..1875537
/gene="ogt"
/locus_tag="SF1835"
/note="Code: L; COG: COG0350"
/codon_start=1
/transl_table=11
/product="O-6-alkylguanine-DNA:cysteine-protein
methyltransferase"
/protein_id="NP_707690.1"
/db_xref="GeneID:1025017"
/translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
HYRKEGYERISATNPGGLSDKLREYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
WLLRHEGYLLL"
misc_feature 1875022..1875534
/gene="ogt"
/locus_tag="SF1835"
/note="methylated-DNA--[protein]-cysteine
S-methyltransferase; Region: PRK10286"
/db_xref="CDD:182355"
gene 1875732..1876484
/gene="fnr"
/locus_tag="SF1836"
/db_xref="GeneID:1025042"
CDS 1875732..1876484
/gene="fnr"
/locus_tag="SF1836"
/note="Code: T; COG: COG0664"
/codon_start=1
/transl_table=11
/product="fumarate/nitrate reduction transcriptional
regulator"
/protein_id="NP_707691.2"
/db_xref="GeneID:1025042"
/translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
misc_feature 1875762..1876466
/gene="fnr"
/locus_tag="SF1836"
/note="fumarate/nitrate reduction transcriptional
regulator Fnr; Region: PRK11161"
/db_xref="CDD:183004"
gene 1876636..1877586
/gene="ydaA"
/locus_tag="SF1837"
/db_xref="GeneID:1025007"
CDS 1876636..1877586
/gene="ydaA"
/locus_tag="SF1837"
/note="Code: T; COG: COG0589"
/codon_start=1
/transl_table=11
/product="universal stress protein UspE"
/protein_id="NP_707692.2"
/db_xref="GeneID:1025007"
/translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ
EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYN
DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD"
misc_feature 1876639..1877553
/gene="ydaA"
/locus_tag="SF1837"
/note="universal stress protein UspE; Provisional; Region:
PRK11175"
/db_xref="CDD:236871"
mobile_element complement(1878085..1879333)
/mobile_element_type="insertion sequence:IS911"
gene complement(1878093..1878932)
/locus_tag="SF1838"
/db_xref="GeneID:1025008"
CDS complement(1878093..1878932)
/locus_tag="SF1838"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_707693.1"
/db_xref="GeneID:1025008"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(1878102..1878911)
/locus_tag="SF1838"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(1878959..1879261)
/locus_tag="SF1839"
/db_xref="GeneID:1026489"
CDS complement(1878959..1879261)
/locus_tag="SF1839"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_707694.1"
/db_xref="GeneID:1026489"
/translation="MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVK
QLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR"
misc_feature complement(1878989..1879258)
/locus_tag="SF1839"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1879389..1880420
/locus_tag="SF1840"
/db_xref="GeneID:1024992"
CDS 1879389..1880420
/locus_tag="SF1840"
/note="Code: M; COG: COG0668"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707695.1"
/db_xref="GeneID:1024992"
/translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
VQFLIYTIIISAVGSISNYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE
KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN
SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV
YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD
NITPPEQGR"
misc_feature 1879617..1880393
/locus_tag="SF1840"
/note="Small-conductance mechanosensitive channel [Cell
wall/membrane/envelope biogenesis]; Region: MscS; COG0668"
/db_xref="CDD:440432"
gene complement(1880471..1882105)
/locus_tag="SF1841"
/db_xref="GeneID:1025009"
CDS complement(1880471..1882105)
/locus_tag="SF1841"
/note="Code: EP; COG: COG0747"
/codon_start=1
/transl_table=11
/product="transport protein"
/protein_id="NP_707696.1"
/db_xref="GeneID:1025009"
/translation="MSVRGKLMKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQEL
VRHIKDEPASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWT
FTLRDNAKWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATP
DQLGVTAVDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGA
YVLKERVVNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFP
KNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVL
GTGEKPAWHFIPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLY
NTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEP
STFLTLLTSMHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAP
IYQYTNGRLIKPWLKGYPINNPEDVAYSRTMYIVKH"
misc_feature complement(1880477..1882084)
/locus_tag="SF1841"
/note="ABC-type oligopeptide transport system, periplasmic
component [Amino acid transport and metabolism]; Region:
OppA; COG4166"
/db_xref="CDD:443327"
gene complement(1882421..1882887)
/gene="ycjZ"
/locus_tag="SF1842"
/pseudo
/db_xref="GeneID:1025013"
misc_feature complement(1882421..1882887)
/gene="ycjZ"
/locus_tag="SF1842"
/note="Similar to Escherichia coli K12 transcriptional
regulator LYSR-type gi: 1787589 (300 aa). BLAST with
identity of 99% in 155 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element 1882888..1883264
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 1882952..1883254
/locus_tag="SF1843"
/db_xref="GeneID:1024995"
CDS 1882952..1883254
/locus_tag="SF1843"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707697.1"
/db_xref="GeneID:1024995"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 1882952..1883224
/locus_tag="SF1843"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element complement(1883263..1883693)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(1883305..1884174)
/locus_tag="SF1844"
/pseudogene="unknown"
/db_xref="GeneID:1025000"
mobile_element complement(1883694..1884554)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(1884174..1884500)
/locus_tag="SF1846"
/db_xref="GeneID:1025047"
CDS complement(1884174..1884500)
/locus_tag="SF1846"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_707700.1"
/db_xref="GeneID:1025047"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNNILRLASAYFAKAEF
DRLWKK"
misc_feature complement(1884210..1884497)
/locus_tag="SF1846"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 1884554..1885446
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 1884585..1885403
/locus_tag="SF1847"
/db_xref="GeneID:1024996"
CDS 1884585..1885403
/locus_tag="SF1847"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707701.1"
/db_xref="GeneID:1024996"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKHKFRATTNSNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature <1884585..1885376
/locus_tag="SF1847"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 1885767..1886687
/locus_tag="SF1849"
/pseudo
/db_xref="GeneID:1025015"
misc_feature 1885767..1886687
/locus_tag="SF1849"
/note="Similar to Salmonella enterica subsp. enterica
serovar Typhi integrase ref: NP_456439.1 (358 aa). BLAST
with identity of 96% in 307 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene complement(1887237..1887578)
/locus_tag="SF1850"
/db_xref="GeneID:1025037"
CDS complement(1887237..1887578)
/locus_tag="SF1850"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707703.1"
/db_xref="GeneID:1025037"
/translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSL
APFIERAEKLC"
misc_feature complement(1887240..1887503)
/locus_tag="SF1850"
/note="Protein of unknown function (DUF2511); Region:
DUF2511; pfam10709"
/db_xref="CDD:431451"
gene complement(1887591..1888463)
/locus_tag="SF1851"
/pseudo
/db_xref="GeneID:1025043"
misc_feature complement(1887591..1888463)
/locus_tag="SF1851"
/note="Similar to Escherichia coli K12 resistance protein
gi: 1788145 (291 aa). BLAST with identity of 98% in 290
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene complement(1888467..1888841)
/locus_tag="SF1852"
/db_xref="GeneID:1025006"
CDS complement(1888467..1888841)
/locus_tag="SF1852"
/note="Code: R; COG: COG2372"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707704.1"
/db_xref="GeneID:1025006"
/translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA
PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT
VDWHVVSVDGHKTKGHYTFSVK"
misc_feature complement(1888470..1888841)
/locus_tag="SF1852"
/note="CopC domain-containing protein YobA; Region:
PRK10301"
/db_xref="CDD:182365"
gene 1888980..1889210
/gene="holE"
/locus_tag="SF1853"
/db_xref="GeneID:1023376"
CDS 1888980..1889210
/gene="holE"
/locus_tag="SF1853"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit theta"
/protein_id="NP_707705.2"
/db_xref="GeneID:1023376"
/translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ
PEHLRSWFRERLIAHRLASVNLSRLPYEPKLK"
misc_feature 1888980..1889201
/gene="holE"
/locus_tag="SF1853"
/note="DNA polymerase III subunit theta; Reviewed; Region:
PRK10969"
/db_xref="CDD:182872"
gene 1889312..1889968
/locus_tag="SF1854"
/pseudo
/db_xref="GeneID:1025034"
misc_feature 1889312..1889968
/locus_tag="SF1854"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788148 (219 aa). BLAST with
identity of 99% in 219 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 1889992..1890654
/locus_tag="SF1855"
/db_xref="GeneID:1025005"
CDS 1889992..1890654
/locus_tag="SF1855"
/note="Code: L; COG: COG0847"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease X"
/protein_id="NP_707706.2"
/db_xref="GeneID:1025005"
/translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSLLVRPDRPIS
PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
ARRLWPGLKYSNMALYKTRKLNVQTPLGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
MADITGRPSLMTTFTFGKYRGKAVSDVAERYPGYLRWLFNNLDSMSPELRLTLKHYLE
NT"
misc_feature 1889992..1890648
/locus_tag="SF1855"
/note="exodeoxyribonuclease X; Provisional; Region:
PRK07983"
/db_xref="CDD:181186"
gene complement(1890651..1892711)
/gene="ptrB"
/locus_tag="SF1856"
/db_xref="GeneID:1025040"
CDS complement(1890651..1892711)
/gene="ptrB"
/locus_tag="SF1856"
/note="Code: E; COG: COG1770"
/codon_start=1
/transl_table=11
/product="protease 2"
/protein_id="NP_707707.1"
/db_xref="GeneID:1025040"
/translation="MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPKVLDYLQQEN
SYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQS
AFSEEWDEWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNL
ETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDTLIYE
EKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLD
HYQHRFYLRSNRHGKNFGLYRTRMRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQ
RGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETARLRYGYSSMTTPDTLFELD
MDTGERRVLKQTEVPGFDAANYRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVY
GYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDY
LDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTML
DESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWE
PAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLVALAQGTLPA
TPAD"
misc_feature complement(1890654..1892711)
/gene="ptrB"
/locus_tag="SF1856"
/note="protease 2; Provisional; Region: PRK10115"
/db_xref="CDD:182247"
gene complement(1892921..1893580)
/gene="yebE"
/locus_tag="SF1857"
/db_xref="GeneID:1025044"
CDS complement(1892921..1893580)
/gene="yebE"
/locus_tag="SF1857"
/note="Code: S; COG: COG2979"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707708.1"
/db_xref="GeneID:1025044"
/translation="MANWLNQLQSLLGQSSSSTSSSADQGLGKLLVSGALGGLAGLLV
ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT
ERLILALVFAAKSDGHIDANERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATG
VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVREGIERDLEQQKRTLA
E"
misc_feature complement(1892951..>1893436)
/gene="yebE"
/locus_tag="SF1857"
/note="Uncharacterized membrane protein YebE, DUF533
family [Function unknown]; Region: YebE; COG2979"
/db_xref="CDD:442218"
gene complement(1893907..1894263)
/gene="yebF"
/locus_tag="SF1858"
/db_xref="GeneID:1025024"
CDS complement(1893907..1894263)
/gene="yebF"
/locus_tag="SF1858"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707709.2"
/db_xref="GeneID:1025024"
/translation="MKKRGAFLGRLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
QVCVDCKAGMAEYQRR"
misc_feature complement(1893910..1894260)
/gene="yebF"
/locus_tag="SF1858"
/note="hypothetical protein; Provisional; Region:
PRK13680"
/db_xref="CDD:184237"
gene 1894754..1895932
/gene="purT"
/locus_tag="SF1859"
/db_xref="GeneID:1025071"
CDS 1894754..1895932
/gene="purT"
/locus_tag="SF1859"
/note="Code: F; COG: COG0027"
/codon_start=1
/transl_table=11
/product="phosphoribosylglycinamide formyltransferase 2"
/protein_id="NP_707710.1"
/db_xref="GeneID:1025071"
/translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVV
PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSKSLFREAVAAIGYPCIVKPVMSS
SGKGQTFIRSAEQLAQAWEYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVI
FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN
VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVVLATSESVVDAIERAKHAAGQVKVQG
"
misc_feature 1894754..1895926
/gene="purT"
/locus_tag="SF1859"
/note="Formate-dependent phosphoribosylglycinamide
formyltransferase (GAR transformylase) [Nucleotide
transport and metabolism]; Region: PurT; COG0027"
/db_xref="CDD:439798"
gene complement(1895988..1896629)
/gene="eda"
/locus_tag="SF1860"
/db_xref="GeneID:1025033"
CDS complement(1895988..1896629)
/gene="eda"
/locus_tag="SF1860"
/note="Code: G; COG: COG0800"
/codon_start=1
/transl_table=11
/product="keto-hydroxyglutarate-aldolase/keto-deoxy-
phosphogluconate aldolase"
/protein_id="NP_707711.1"
/db_xref="GeneID:1025033"
/translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
misc_feature complement(1895994..1896629)
/gene="eda"
/locus_tag="SF1860"
/note="keto-hydroxyglutarate-aldolase/keto-deoxy-
phosphogluconate aldolase; Provisional; Region: PRK05718"
/db_xref="CDD:235577"
misc_feature complement(order(1896147..1896149,1896225..1896227,
1896231..1896233,1896411..1896413,1896483..1896485,
1896495..1896497))
/gene="eda"
/locus_tag="SF1860"
/note="active site"
/db_xref="CDD:188632"
misc_feature complement(order(1896171..1896176,1896186..1896188,
1896222..1896227,1896252..1896254,1896264..1896266,
1896270..1896281,1896339..1896350,1896405..1896407,
1896411..1896413,1896483..1896485))
/gene="eda"
/locus_tag="SF1860"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:188632"
misc_feature complement(1896231..1896233)
/gene="eda"
/locus_tag="SF1860"
/note="catalytic residue [active]"
/db_xref="CDD:188632"
gene complement(1896666..1898477)
/gene="edd"
/locus_tag="SF1861"
/db_xref="GeneID:1025041"
CDS complement(1896666..1898477)
/gene="edd"
/locus_tag="SF1861"
/note="Code: EG; COG: COG0129"
/codon_start=1
/transl_table=11
/product="phosphogluconate dehydratase"
/protein_id="NP_707712.1"
/db_xref="GeneID:1025041"
/translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
LAHGFAACQPENKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
GTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA
RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL
DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT
DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
misc_feature complement(1896672..1898474)
/gene="edd"
/locus_tag="SF1861"
/note="6-phosphogluconate dehydratase; Region: edd;
TIGR01196"
/db_xref="CDD:130264"
gene complement(1898712..1900187)
/gene="zwf"
/locus_tag="SF1862"
/db_xref="GeneID:1025029"
CDS complement(1898712..1900187)
/gene="zwf"
/locus_tag="SF1862"
/experiment="mass spectrum study"
/codon_start=1
/transl_table=11
/product="glucose-6-phosphate dehydrogenase"
/protein_id="YP_004797676.1"
/db_xref="GeneID:1025029"
/translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKVGQLNPDTR
IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
misc_feature complement(1898721..1900187)
/gene="zwf"
/locus_tag="SF1862"
/note="Glucose-6-phosphate 1-dehydrogenase [Carbohydrate
transport and metabolism]; Region: Zwf; COG0364"
/db_xref="CDD:440133"
gene complement(1900353..1900502)
/locus_tag="SF1862a"
/db_xref="GeneID:16608334"
CDS complement(1900353..1900502)
/locus_tag="SF1862a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439257.1"
/db_xref="GeneID:16608334"
/translation="MTISALKEIEMQFCQILRLCAVLMTKADKKVVIFFHNMISVRFL
PNGKR"
gene 1900525..1901394
/gene="yebK"
/locus_tag="SF1863"
/db_xref="GeneID:1025068"
CDS 1900525..1901394
/gene="yebK"
/locus_tag="SF1863"
/note="Code: K; COG: COG1737"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator HexR"
/protein_id="NP_707713.1"
/db_xref="GeneID:1025068"
/translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEA
NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA
MATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS
DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE
ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
RFDKQLLNLSDDR"
misc_feature 1900525..1901364
/gene="yebK"
/locus_tag="SF1863"
/note="DNA-binding transcriptional regulator HexR;
Provisional; Region: PRK11302"
/db_xref="CDD:183082"
gene 1901522..1902964
/gene="pykA"
/locus_tag="SF1864"
/db_xref="GeneID:1025032"
CDS 1901522..1902964
/gene="pykA"
/locus_tag="SF1864"
/note="Code: G; COG: COG0469"
/codon_start=1
/transl_table=11
/product="pyruvate kinase"
/protein_id="NP_707714.2"
/db_xref="GeneID:1025032"
/translation="MSKRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
GEGDKEKVGIDYKGLPTDVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
KIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVPFDSANDGVAAASEAVNLLRDKGY
LMSGDLVIVTQGDVMSTVGSTNTTRILTVE"
misc_feature 1901528..1902928
/gene="pykA"
/locus_tag="SF1864"
/note="pyruvate kinase; Provisional; Region: PRK05826"
/db_xref="CDD:235619"
gene complement(1903095..1904066)
/gene="msbB"
/locus_tag="SF1865"
/db_xref="GeneID:1027792"
CDS complement(1903095..1904066)
/gene="msbB"
/locus_tag="SF1865"
/note="Code: N; COG: COG1560"
/codon_start=1
/transl_table=11
/product="lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA
acyltransferase"
/protein_id="NP_707715.1"
/db_xref="GeneID:1027792"
/translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFR
DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
LAIRGPEKIQPRVGWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
IERRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK"
misc_feature complement(1903104..1904066)
/gene="msbB"
/locus_tag="SF1865"
/note="lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA
acyltransferase; Validated; Region: PRK08943"
/db_xref="CDD:236355"
misc_feature complement(order(1903431..1903439,1903575..1903586,
1903635..1903637,1903641..1903643,1903650..1903652))
/gene="msbB"
/locus_tag="SF1865"
/note="putative acyl-acceptor binding pocket [active]"
/db_xref="CDD:153246"
gene complement(1904186..1905508)
/gene="yebA"
/locus_tag="SF1866"
/db_xref="GeneID:1025021"
CDS complement(1904186..1905508)
/gene="yebA"
/locus_tag="SF1866"
/note="Code: M; COG: COG0739"
/codon_start=1
/transl_table=11
/product="peptidase"
/protein_id="NP_707716.1"
/db_xref="GeneID:1025021"
/translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
misc_feature complement(1904189..1905508)
/gene="yebA"
/locus_tag="SF1866"
/note="putative peptidase; Provisional; Region: PRK11649"
/db_xref="CDD:236946"
gene complement(1905524..1906582)
/gene="yebL"
/locus_tag="SF1868"
/db_xref="GeneID:1025045"
CDS complement(1905524..1906582)
/gene="yebL"
/locus_tag="SF1868"
/note="Code: P; COG: COG0803"
/codon_start=1
/transl_table=11
/product="adhesin"
/protein_id="NP_707717.3"
/db_xref="GeneID:1025045"
/translation="MAKRNRDIFQGNQTCHVNFSLAVVMKCYNITLLIFITMIGRIML
HKKTLLFAALSTALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPDGASEH
DYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPEAKQVTIAQLEDVKPLLMKSI
HGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDAN
LKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPG
AQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSY
SEFLSQLANQYASCLKGD"
misc_feature complement(1905533..1906453)
/gene="yebL"
/locus_tag="SF1868"
/note="zinc ABC transporter substrate-binding protein
ZnuA; Region: znuA; PRK09545"
/db_xref="CDD:236558"
misc_feature complement(order(1905620..1905622,1905836..1905838,
1906028..1906030,1906277..1906279))
/gene="yebL"
/locus_tag="SF1868"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238501"
gene 1906535..1907290
/gene="znuC"
/locus_tag="SF1867"
/db_xref="GeneID:1025031"
CDS 1906535..1907290
/gene="znuC"
/locus_tag="SF1867"
/note="Code: P; COG: COG1121"
/codon_start=1
/transl_table=11
/product="high-affinity zinc ABC transporter ATPase"
/protein_id="NP_707718.1"
/db_xref="GeneID:1025031"
/translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNCPQLLVLDEPTQGVDVNGQVALY
DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS"
misc_feature 1906535..1907287
/gene="znuC"
/locus_tag="SF1867"
/note="high-affinity zinc transporter ATPase; Reviewed;
Region: znuC; PRK09544"
/db_xref="CDD:181939"
gene 1907287..1908071
/locus_tag="SF1869"
/db_xref="GeneID:1025026"
gene complement(1908218..1909228)
/gene="ruvB"
/locus_tag="SF1870"
/db_xref="GeneID:1025087"
CDS complement(1908218..1909228)
/gene="ruvB"
/locus_tag="SF1870"
/note="Code: L; COG: COG2255"
/codon_start=1
/transl_table=11
/product="Holliday junction DNA helicase RuvB"
/protein_id="NP_707720.1"
/db_xref="GeneID:1025087"
/translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGAQEVARRARG
TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
MP"
misc_feature complement(1908227..1909228)
/gene="ruvB"
/locus_tag="SF1870"
/note="Holliday junction resolvasome RuvABC, ATP-dependent
DNA helicase subunit RuvB [Replication, recombination and
repair]; Region: RuvB; COG2255"
/db_xref="CDD:441856"
gene complement(1909237..1909848)
/gene="ruvA"
/locus_tag="SF1871"
/db_xref="GeneID:1025030"
CDS complement(1909237..1909848)
/gene="ruvA"
/locus_tag="SF1871"
/note="Code: L; COG: COG0632"
/codon_start=1
/transl_table=11
/product="Holliday junction DNA helicase RuvA"
/protein_id="NP_707721.1"
/db_xref="GeneID:1025030"
/translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE
AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
EREEVGPLVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
QEAVAALVALGYKPQEASRMVSKIARPDTSSETLIREALRAAL"
misc_feature complement(1909240..1909848)
/gene="ruvA"
/locus_tag="SF1871"
/note="Holliday junction branch migration protein RuvA;
Region: ruvA; PRK00116"
/db_xref="CDD:234645"
gene 1910052..1910723
/locus_tag="SF1872"
/db_xref="GeneID:1025027"
CDS 1910052..1910723
/locus_tag="SF1872"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707722.3"
/db_xref="GeneID:1025027"
/translation="MRLLKNNFLCYYVYLYLFQWNDNVNINYPAEYEIGDIVFTCIGA
ALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIK
RLDAGLTEQQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEI
ETFGQLLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPE
LTEAV"
misc_feature 1910124..1910720
/locus_tag="SF1872"
/note="YebB family permuted papain-like enzyme; Region:
PRK11470"
/db_xref="CDD:183152"
gene complement(1910725..1911246)
/gene="ruvC"
/locus_tag="SF1873"
/db_xref="GeneID:1025092"
CDS complement(1910725..1911246)
/gene="ruvC"
/locus_tag="SF1873"
/note="Code: L; COG: COG0817"
/codon_start=1
/transl_table=11
/product="Holliday junction resolvase"
/protein_id="NP_707723.2"
/db_xref="GeneID:1025092"
/translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR
LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
AARQVKQTVVGMGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
SESRLNLTRGRLR"
misc_feature complement(1910770..1911237)
/gene="ruvC"
/locus_tag="SF1873"
/note="crossover junction endodeoxyribonuclease RuvC;
Region: ruvC; TIGR00228"
/db_xref="CDD:129331"
misc_feature complement(order(1910932..1910934,1911004..1911009,
1911016..1911018,1911022..1911024,1911028..1911030,
1911034..1911042,1911115..1911117,1911133..1911135,
1911142..1911144,1911211..1911219))
/gene="ruvC"
/locus_tag="SF1873"
/note="nucleic acid substrate binding site [nucleotide
binding]; other site"
/db_xref="CDD:438562"
misc_feature complement(order(1910950..1910952,1910956..1910958,
1910965..1910970,1910977..1910982,1910986..1910991,
1910998..1911003,1911010..1911015,1911022..1911024,
1911031..1911033,1911100..1911102,1911109..1911114,
1911118..1911126))
/gene="ruvC"
/locus_tag="SF1873"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:438562"
gene complement(1911281..1912022)
/gene="yebC"
/locus_tag="SF1874"
/pseudo
/db_xref="GeneID:1026542"
misc_feature complement(1911281..1912022)
/gene="yebC"
/locus_tag="SF1874"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788171 (247 aa). BLAST with
identity of 97% in 247 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1912051..1912533)
/gene="ntpA"
/locus_tag="SF1875"
/db_xref="GeneID:1025022"
CDS complement(1912051..1912533)
/gene="ntpA"
/locus_tag="SF1875"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="dihydroneopterin triphosphate pyrophosphatase"
/protein_id="NP_707724.2"
/db_xref="GeneID:1025022"
/translation="MSEGSQRRGSVKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPD
FWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYA
PGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
"
misc_feature complement(1912054..1912494)
/gene="ntpA"
/locus_tag="SF1875"
/note="dihydroneopterin triphosphate pyrophosphatase;
Provisional; Region: nudB; PRK09438"
/db_xref="CDD:236516"
gene complement(1912621..1914393)
/gene="aspS"
/locus_tag="SF1876"
/db_xref="GeneID:1025025"
CDS complement(1912621..1914393)
/gene="aspS"
/locus_tag="SF1876"
/note="Code: J; COG: COG0173"
/codon_start=1
/transl_table=11
/product="aspartyl-tRNA synthetase"
/protein_id="NP_707725.1"
/db_xref="GeneID:1025025"
/translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
FFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
APSFANPTALAELSIQVVKKAENN"
misc_feature complement(1912630..1914393)
/gene="aspS"
/locus_tag="SF1876"
/note="Aspartyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: AspS; COG0173"
/db_xref="CDD:439943"
gene 1914670..1916719
/gene="yecD"
/locus_tag="SF1877"
/pseudo
/db_xref="GeneID:1025035"
misc_feature 1914670..1916719
/gene="yecD"
/locus_tag="SF1877"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788174 (200 aa). BLAST with
identity of 96% in 719 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
/pseudo
misc_feature 1914921..1921791
/note="ipaH island III"
mobile_element complement(1915003..1916376)
/mobile_element_type="insertion sequence:ISSfl2"
gene 1915149..1916345
/locus_tag="SF1878"
/db_xref="GeneID:1025089"
CDS 1915149..1916345
/locus_tag="SF1878"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl2 transposase"
/protein_id="NP_707726.1"
/db_xref="GeneID:1025089"
/translation="MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDE
NKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAG
EAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIR
GLLTQIHPALERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKR
LAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYP
VLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGN
KALKRALFLSAFTALRDPLSRAYYTRKMSQGKRHNQALIALARRRCDVLFAMMRDGTF
YTPQGS"
misc_feature 1915185..1916321
/locus_tag="SF1878"
/note="IS110 family transposase; Region: transpos_IS110;
NF033542"
/db_xref="CDD:468073"
gene 1917074..1917322
/locus_tag="SF1879"
/db_xref="GeneID:1026504"
CDS 1917074..1917322
/locus_tag="SF1879"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707727.1"
/db_xref="GeneID:1026504"
/translation="MRFEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKA
TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
misc_feature 1917119..1917313
/locus_tag="SF1879"
/note="DinI-like family; Region: DinI; cl11630"
/db_xref="CDD:448327"
gene 1917922..1919673
/gene="ipaH_4"
/locus_tag="SF1880"
/db_xref="GeneID:1025069"
CDS 1917922..1919673
/gene="ipaH_4"
/locus_tag="SF1880"
/codon_start=1
/transl_table=11
/product="invasion plasmid antigen"
/protein_id="NP_707728.1"
/db_xref="GeneID:1025069"
/translation="MLPTNNNHRLISNSFSTYSIDTSRAYENYLTHWTEWKNNRIQEE
QRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLT
QLNVSYNRLIELPALPQGLKLLNASHNQLITLPTLPISLKELHVSNNQLCSLPVLPEL
LETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLP
ENLRNGYFDINQISHIPESILNLRNECSIDISDNPLSSHALQSLQRLTSSPDYHGPQI
YFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDT
VSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLV
HQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEK
LQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEAD
RWALAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTD
EVLALRLPENGSQLHHS"
misc_feature 1917976..1919628
/gene="ipaH_4"
/locus_tag="SF1880"
/note="type III secretion system effector E3 ubiquitin
transferase SlrP; Region: PRK15370"
/db_xref="CDD:185268"
misc_feature 1918342..1918389
/gene="ipaH_4"
/locus_tag="SF1880"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1918402..1918461
/gene="ipaH_4"
/locus_tag="SF1880"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1918582..1918650
/gene="ipaH_4"
/locus_tag="SF1880"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
gene complement(1919853..1920476)
/locus_tag="SF1881"
/db_xref="GeneID:1025067"
CDS complement(1919853..1920476)
/locus_tag="SF1881"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_707729.1"
/db_xref="GeneID:1025067"
/translation="MHMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFD
DRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAW
RTEQEAKPFTFEWNGRTWNADASSVARLSPVVMLAKSVAAQTHMVWSDADNQQVKLSM
PELEELAAAMVQAQVDRNDEIYRRQREMKEELSSLDDLASIRAFDVK"
misc_feature complement(1919868..1920191)
/locus_tag="SF1881"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
gene complement(1920555..1921838)
/locus_tag="SF1882"
/pseudogene="unknown"
/db_xref="GeneID:1025079"
gene complement(1921902..1922501)
/locus_tag="SF1883"
/db_xref="GeneID:1025095"
CDS complement(1921902..1922501)
/locus_tag="SF1883"
/codon_start=1
/transl_table=11
/product="membrane protein"
/protein_id="NP_707731.1"
/db_xref="GeneID:1025095"
/translation="MRKLYAAILSAAICLAVSGAPAWASEHRSTLSAGYLHASTNAPG
SDDLNGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAG
LSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAW
GAGVQFNPTESVAIDLAYEGSGSGDWRTDGFIVGVGYKF"
misc_feature complement(1921905..1922501)
/locus_tag="SF1883"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl21487"
/db_xref="CDD:473880"
gene complement(1922569..1926048)
/locus_tag="SF1884"
/db_xref="GeneID:1025077"
CDS complement(1922569..1926048)
/locus_tag="SF1884"
/codon_start=1
/transl_table=11
/product="host specificity protein"
/protein_id="NP_707732.1"
/db_xref="GeneID:1025077"
/translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKS
VLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
TITSANIDRLRLTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
SQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
GVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMAWCL
WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRK
AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
KDRHNVVEVNWIDPDNGHETATELVEDTQAIVRYGRNVTKMDAFGCTSRGQAHRAGLW
LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLD
REITLPSSGTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTL
RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHL
TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFRQ
LALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITVVPKLAVYDP
TVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVRSVNTVGKS
AFVEAVGRASDDAEGYLSFYKGLINKTHLGKELWTQIDNGQLAPDLTEIRTSITNVSN
EITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIEN
TPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNP
PAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIEGDLVKTVG
KPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNNIYSSCRLI
VKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPTASISDLLV
VVMKKSTAGISIS"
misc_feature complement(1923028..1925403)
/locus_tag="SF1884"
/note="Phage-related protein, tail protein J [Mobilome:
prophages, transposons]; Region: COG4733"
/db_xref="CDD:443767"
misc_feature complement(1922698..1923120)
/locus_tag="SF1884"
/note="Fibronectin type III protein; Region: DUF3672;
pfam12421"
/db_xref="CDD:289206"
gene complement(1926109..1926651)
/locus_tag="SF1885"
/db_xref="GeneID:1025105"
CDS complement(1926109..1926651)
/locus_tag="SF1885"
/codon_start=1
/transl_table=11
/product="phage tail protein"
/protein_id="NP_707733.2"
/db_xref="GeneID:1025105"
/translation="MKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDAGETELSAR
LNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVAIWMPGVGIMASNLLFSLGAS
MTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMVAQGNVLPVLYGEMRVGSRVV
SQEISTADEGDGGQVVVIGR"
misc_feature complement(1926142..1926648)
/locus_tag="SF1885"
/note="Phage-related protein, tail assembly protein I
[Mobilome: prophages, transposons]; Region: COG4723"
/db_xref="CDD:443758"
gene complement(1926648..1927247)
/locus_tag="SF1886"
/db_xref="GeneID:1025023"
CDS complement(1926648..1927247)
/locus_tag="SF1886"
/codon_start=1
/transl_table=11
/product="tail assembly protein"
/protein_id="NP_707734.2"
/db_xref="GeneID:1025023"
/translation="MAPEDWLRAQMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPW
WLVCRGTIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQ
NLYLDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKR
ERYTDKWQRRTHSLWRHREWHASAFTGICNDLAAASTFV"
misc_feature complement(1927068..>1927247)
/locus_tag="SF1886"
/note="Mpr1p, Pad1p N-terminal (MPN) domains; Region: MPN;
cl13996"
/db_xref="CDD:472685"
misc_feature complement(1926720..1927061)
/locus_tag="SF1886"
/note="NlpC/P60 family; Region: NLPC_P60; cl21534"
/db_xref="CDD:473902"
gene complement(1927396..1928094)
/locus_tag="SF1887"
/db_xref="GeneID:1026511"
CDS complement(1927396..1928094)
/locus_tag="SF1887"
/codon_start=1
/transl_table=11
/product="minor tail protein"
/protein_id="NP_707735.1"
/db_xref="GeneID:1026511"
/translation="MQDIRQETLNECTRAEQSARVELWEIDLTEVGGERYFFCNEQNE
KGEPVTWQGRQYQAYPIQGSGFELNGRGCAARPTLTVSNLHGMVTGMAEDLQSLVGGT
VVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLATPTETDG
AVFPGRIMLANTCMWTYRSDECGYTGRAVADEFDKPTTDIRKDKCSKCMRGCELRNNT
GNFGGFLSINKLSQ"
misc_feature complement(1927399..1928079)
/locus_tag="SF1887"
/note="Phage tail protein [Mobilome: prophages,
transposons]; Region: gp18; COG4672"
/db_xref="CDD:443709"
gene complement(1928094..1928423)
/locus_tag="SF1888"
/db_xref="GeneID:1025086"
CDS complement(1928094..1928423)
/locus_tag="SF1888"
/codon_start=1
/transl_table=11
/product="minor tail protein"
/protein_id="NP_707736.1"
/db_xref="GeneID:1025086"
/translation="METFHWKVRPDMNVVSEPKVVTVKLGDGYEQRRAAGLNNQLSTY
SVTIRVRKGEHPSLKAFLERHGGVRAFQWTPPYDWKLIRVVCRKWSASVGALWVTVTA
DFEQVVN"
misc_feature complement(1928100..1928417)
/locus_tag="SF1888"
/note="Phage minor tail protein; Region: Phage_min_tail;
pfam05939"
/db_xref="CDD:428681"
gene complement(1928423..1931464)
/locus_tag="SF1889"
/db_xref="GeneID:1025072"
CDS complement(1928423..1931464)
/locus_tag="SF1889"
/codon_start=1
/transl_table=11
/product="tail length tape measure protein"
/protein_id="NP_707737.1"
/db_xref="GeneID:1025072"
/translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQ
RFMERQTQAARQTMQAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQK
MREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQ
DYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGV
SSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRA
GWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEKFNRQLALTGHYAGVTVG
QLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDT
INQFKRLKDDPVNAAKALDNALHFLNATQLEQIRVLGEQGRSSDAARIAMSALAEETG
KRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYP
WTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNET
EAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYS
QQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKN
ELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGD
KQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKR
YWQELEVAQGDWKNGAMRAFQNFTADADNAAGTAEQMFTVAFSSAGNALATFCTTGKL
NFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVN
RPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIEINND
GTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR"
misc_feature complement(<1930697..>1931371)
/locus_tag="SF1889"
/note="Chromosome segregation ATPase Smc [Cell cycle
control, cell division, chromosome partitioning]; Region:
Smc; COG1196"
/db_xref="CDD:440809"
misc_feature complement(1930187..1930780)
/locus_tag="SF1889"
/note="Prophage tail length tape measure protein; Region:
TMP_2; pfam06791"
/db_xref="CDD:429120"
misc_feature complement(<1929182..>1930009)
/locus_tag="SF1889"
/note="Chromosome segregation ATPase Smc [Cell cycle
control, cell division, chromosome partitioning]; Region:
Smc; COG1196"
/db_xref="CDD:440809"
misc_feature complement(1928546..1929508)
/locus_tag="SF1889"
/note="phage tail tape measure protein, lambda family;
Region: tape_meas_lam_C; TIGR01541"
/db_xref="CDD:273681"
gene complement(1931436..1931711)
/locus_tag="SF1890"
/db_xref="GeneID:1025073"
CDS complement(1931436..1931711)
/locus_tag="SF1890"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_707738.2"
/db_xref="GeneID:1025073"
/translation="MLSDMSATELGEWGDYFRMQSFSDVWMDAQFASLKALIVRMVSG
SSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH"
misc_feature complement(1931448..1931711)
/locus_tag="SF1890"
/note="Minor tail protein T; Region: Phage_tail_T;
cl05636"
/db_xref="CDD:297128"
gene complement(1931774..1932160)
/locus_tag="SF1891"
/db_xref="GeneID:1025104"
CDS complement(1931774..1932160)
/locus_tag="SF1891"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_707739.2"
/db_xref="GeneID:1025104"
/translation="MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEG
ELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGAER
VLSLSGMGTIENAGDDDHEALTPEKS"
misc_feature complement(1931777..1932160)
/locus_tag="SF1891"
/note="Bacteriophage lambda tail assembly chaperone, TAC,
protein G; Region: Phage_TAC_2; cl06106"
/db_xref="CDD:297413"
gene complement(1932219..1932959)
/locus_tag="SF1892"
/db_xref="GeneID:1025083"
CDS complement(1932219..1932959)
/locus_tag="SF1892"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_707740.2"
/db_xref="GeneID:1025083"
/translation="MTTPNPLAKTKGAGTTFWMYTGNGDAFANPLSDTDWLRLAMVKD
LQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDS
GEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEGTETVG
VTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATVKG
VKQGSVSIVGMTSDGEFVAVAAVTVSAP"
misc_feature complement(1932504..1932908)
/locus_tag="SF1892"
/note="Lambda phage tail tube protein, TTP; Region:
Phage_TTP_12; pfam16461"
/db_xref="CDD:406780"
misc_feature complement(1932255..1932476)
/locus_tag="SF1892"
/note="Bacterial Ig-like domain (group 2); Region: Big_2;
cl02708"
/db_xref="CDD:445894"
gene complement(1932970..1933371)
/locus_tag="SF1893"
/db_xref="GeneID:1025053"
CDS complement(1932970..1933371)
/locus_tag="SF1893"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_707741.1"
/db_xref="GeneID:1025053"
/translation="MNRHTQIRQSVLARLREQCGDSATFFDGLPAFIDAQELPAVAVW
LSDAQYTGKMTDEDDWQAVLHIAVFIRAQAPDSELDMWMESTIFPALNDVPALSGLID
TLNPLGFNYQRDNEMATWAMAEITYQITYTN"
misc_feature complement(1932979..1933365)
/locus_tag="SF1893"
/note="Phage minor tail protein U; Region: Phage_tail_U;
pfam06141"
/db_xref="CDD:399267"
gene complement(1933368..1933958)
/locus_tag="SF1894"
/db_xref="GeneID:1025119"
CDS complement(1933368..1933958)
/locus_tag="SF1894"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_707742.1"
/db_xref="GeneID:1025119"
/translation="MKGLENAIRNLNSLDTRMVPQASAWAINRVAQKAVSVATRQVAG
NTVAGDNQVKGIPLKLVRQRVRVFKASPSGKMTARIRVNRGNLPAIKLNTTRRRAGEG
LRVGKYFFRGAFVQQLANGRWHVLRCLPEARFATGHDHQGRLRKNRLPVEVVKIPLSG
PLTQAFEDARDRIIAAEMPKQLGYALKQQLRLHLSK"
misc_feature complement(1933371..1933958)
/locus_tag="SF1894"
/note="Prophage minor tail protein Z (GPZ); Region:
Minor_tail_Z; pfam06763"
/db_xref="CDD:284235"
gene complement(1933945..1934316)
/locus_tag="SF1895"
/db_xref="GeneID:1025081"
CDS complement(1933945..1934316)
/locus_tag="SF1895"
/codon_start=1
/transl_table=11
/product="tail attachment protein"
/protein_id="NP_707743.1"
/db_xref="GeneID:1025081"
/translation="MADFDNLFDVALDLADKAIIRNMGIRAVITSGRLKGIMISGVFD
DPENISLVAGGVRIEDSLPSLFVKTADILRLCRNDSLMIGRESFCVDRITPDDGGCSY
IRLRREGLPGNVRAGRYYEGA"
misc_feature complement(1933972..1934316)
/locus_tag="SF1895"
/note="Phage Head-Tail Attachment; Region: Phage_attach;
cl05094"
/db_xref="CDD:446606"
gene complement(1934328..1934729)
/locus_tag="SF1896"
/db_xref="GeneID:1026787"
CDS complement(1934328..1934729)
/locus_tag="SF1896"
/codon_start=1
/transl_table=11
/product="DNA-packaging protein"
/protein_id="NP_707744.1"
/db_xref="GeneID:1026787"
/translation="MAKKDDNLKRLRELAASLGREPDISGSAADIAQRVAELEEELAN
MDDTDIRDKSAHPENALTGHENEVISAQPETVIQNMDDLVTVVALVTLHTDALHATRD
EPLAFVPPGMAFRVFAGVAAGMTERGLARMQ"
misc_feature complement(1934340..1934720)
/locus_tag="SF1896"
/note="DNA packaging protein FI; Region: Packaging_FI;
pfam14000"
/db_xref="CDD:290707"
mobile_element complement(1934847..1936220)
/mobile_element_type="insertion sequence:ISSfl2"
gene 1934993..1936189
/locus_tag="SF1897"
/db_xref="GeneID:1025082"
CDS 1934993..1936189
/locus_tag="SF1897"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl2 transposase"
/protein_id="NP_707745.1"
/db_xref="GeneID:1025082"
/translation="MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDE
NKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAG
EAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIR
GLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKR
LAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYP
VLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGN
KALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQVLIALARRRCDVLFAMMRDGTF
YTPQGS"
misc_feature 1935029..1936165
/locus_tag="SF1897"
/note="IS110 family transposase; Region: transpos_IS110;
NF033542"
/db_xref="CDD:468073"
gene complement(1936889..1936963)
/locus_tag="SF4470"
/db_xref="GeneID:3161842"
tRNA complement(1936889..1936963)
/locus_tag="SF4470"
/product="tRNA-Gly"
/codon_recognized="GGA"
/db_xref="GeneID:3161842"
gene complement(1936967..1937042)
/locus_tag="SF4471"
/db_xref="GeneID:3161840"
tRNA complement(1936967..1937042)
/locus_tag="SF4471"
/product="tRNA-Thr"
/codon_recognized="ACA"
/db_xref="GeneID:3161840"
gene complement(1937045..1937121)
/locus_tag="SF4472"
/db_xref="GeneID:3161839"
tRNA complement(1937045..1937121)
/locus_tag="SF4472"
/product="tRNA-Arg"
/codon_recognized="AGA"
/db_xref="GeneID:3161839"
gene complement(1937123..1937198)
/locus_tag="SF4473"
/db_xref="GeneID:3161837"
tRNA complement(1937123..1937198)
/locus_tag="SF4473"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161837"
gene complement(1937375..1938064)
/locus_tag="SF1898"
/db_xref="GeneID:1025046"
CDS complement(1937375..1938064)
/locus_tag="SF1898"
/codon_start=1
/transl_table=11
/product="Q antiterminator encoded by prophage CP-933P"
/protein_id="NP_707746.2"
/db_xref="GeneID:1025046"
/translation="MNNQYLQFVREQLIIATADLSGATKGQLEAWQENAMFDTGRYRR
KKIRYRDEVTGKMITRDNPPIPGKQSLAKGASIPLVSQVAFSTSSWRRAVLSLEEHYK
AWLLWCYSGSICWEYQITITHWAWEEFKAHSGTRKIAEKTQERLKKLIWLAAQAVKAE
LFGGEGYEYQELALLAGVTTKNWSKTFTGHWVVMKHIFHRLDSEALLFVMRTRSEQKA
AFSKQSIAKVD"
misc_feature complement(1937396..1938052)
/locus_tag="SF1898"
/note="Phage antitermination protein Q; Region:
Phage_antiter_Q; pfam06323"
/db_xref="CDD:428887"
gene complement(1938061..1938420)
/locus_tag="SF1899"
/db_xref="GeneID:1025076"
CDS complement(1938061..1938420)
/locus_tag="SF1899"
/codon_start=1
/transl_table=11
/product="crossover junction endodeoxyribonuclease"
/protein_id="NP_707747.1"
/db_xref="GeneID:1025076"
/translation="MRHEFILPYPPTVNTYWRRRGSTYFVSKAGERYRRDVALIVRQQ
RLKLSLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLIDDEQFDETNIVRGL
PVPGGRLGIKITELECA"
misc_feature complement(1938070..1938420)
/locus_tag="SF1899"
/note="Holliday junction resolvase RusA (prophage-encoded
endonuclease) [Replication, recombination and repair];
Region: RusA; COG4570"
/db_xref="CDD:443627"
mobile_element 1938560..1939822
/mobile_element_type="insertion sequence:IS600"
gene 1938624..1938926
/locus_tag="SF1900"
/db_xref="GeneID:1025088"
CDS 1938624..1938926
/locus_tag="SF1900"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707748.1"
/db_xref="GeneID:1025088"
/translation="MSRKTRRYSKEFKAEAVRTVLENQLSISEDASRLFLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 1938624..1938896
/locus_tag="SF1900"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1938962..1939780
/locus_tag="SF1901"
/db_xref="GeneID:1026519"
CDS 1938962..1939780
/locus_tag="SF1901"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707749.1"
/db_xref="GeneID:1026519"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1938962..1939753
/locus_tag="SF1901"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
mobile_element complement(1940278..1941041)
/mobile_element_type="insertion sequence:IS1"
gene complement(1940293..1940796)
/gene="insB"
/locus_tag="SF1902"
/db_xref="GeneID:1025120"
CDS complement(1940293..1940796)
/gene="insB"
/locus_tag="SF1902"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707750.2"
/db_xref="GeneID:1025120"
/translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD
EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature complement(1940296..1940688)
/gene="insB"
/locus_tag="SF1902"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 1941076..1941903
/locus_tag="SF1904"
/db_xref="GeneID:1025059"
CDS 1941076..1941903
/locus_tag="SF1904"
/codon_start=1
/transl_table=11
/product="serine protease"
/protein_id="NP_707752.1"
/db_xref="GeneID:1025059"
/translation="MKKVIPALALVLLTTGLVGCDRVEPGNVGIKVNKLGDDKGVGEV
VGVGRYWTGWNTEVYIFPTFKQMKTYDEPFSFQMSDGTTIGYHIGVAYKVDPSKVTTV
FQTYRKGVDDITDTDLRQKITDALNRLASKMTTDKFIDGGKSELLDAALKDIQEEMTP
IGIQVMSLSYVGKPEYPPTVIDSINAKVTANQKTLQCEQEVKQREAEANMLRAEAAGQ
ADAIRTKAQAEADAIRLRGEALRQNPNVMELEAINKWNGTLPQYMTSGANTPFIQVK"
misc_feature 1941139..1941699
/locus_tag="SF1904"
/note="SPFH domain / Band 7 family; Region: Band_7;
pfam01145"
/db_xref="CDD:426078"
misc_feature <1941652..>1941792
/locus_tag="SF1904"
/note="polarized growth protein Scy; Region:
growth_prot_Scy; NF041483"
/db_xref="CDD:469371"
gene 1941947..1942696
/locus_tag="SF1905"
/db_xref="GeneID:1025106"
CDS 1941947..1942696
/locus_tag="SF1905"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707753.2"
/db_xref="GeneID:1025106"
/translation="MNTVTINNKQFPVIEYRGQRVVTLAMIDEVHQRPEGTARAAFNR
NREHFISGVDYAELGADVIRTDLPEGTFSKFAPSGIVLFESGYLMLTKPFNDALAWQV
QRELVNSYFRTRTPLTEIEMIAAIAADAVRQQKRLNHVEEQLETVTEAVETIKRGNMR
AGYVGYRQVVAKSGMSDTKCRNLVNAYQIPTDTHEFMTPDGLLSRRAIVELEPFMAAF
HQMMSEADPRGTRWYHPKMGLFQVIGWEDKA"
misc_feature 1941980..1942222
/locus_tag="SF1905"
/note="ORF6N domain; Region: ORF6N; pfam10543"
/db_xref="CDD:431348"
gene 1942693..1943262
/locus_tag="SF1906"
/db_xref="GeneID:1025122"
CDS 1942693..1943262
/locus_tag="SF1906"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707754.1"
/db_xref="GeneID:1025122"
/translation="MIIQSKLIRAALVCAAKNDVRYYLNGLHITPKHIEATNGSVALR
MAHGIRTKKNIIVQFEGGVPAKAETTELIFSKEPIAVHRDQFQRRLSITGIKLVDGCF
PDLDRIIPKKFDRCTHPVLQAGYLSYPEKMFGRERKFIPVQLRPSGDGQAVRIQFDSI
INSMYGNPEFVVMPCRDHGDFNVAQEHPE"
misc_feature <1942708..>1943037
/locus_tag="SF1906"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cl42470"
/db_xref="CDD:478224"
gene 1943386..1943628
/locus_tag="SF1906a"
/db_xref="GeneID:16608335"
CDS 1943386..1943628
/locus_tag="SF1906a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439258.1"
/db_xref="GeneID:16608335"
/translation="MFALIQRGQIYTDRAGYPVEITRSTEHSVFFRRMDGRTGRVRIG
EFSSLFEHIDHLEYHKILAETEQEKHLKKLRAMQRK"
misc_feature 1943395..1943547
/locus_tag="SF1906a"
/note="Domain of unknown function (DUF4222); Region:
DUF4222; pfam13973"
/db_xref="CDD:372855"
mobile_element complement(1943951..1945199)
/mobile_element_type="insertion sequence:IS911"
gene complement(1943959..1944798)
/locus_tag="SF1907"
/db_xref="GeneID:1025070"
CDS complement(1943959..1944798)
/locus_tag="SF1907"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_707755.1"
/db_xref="GeneID:1025070"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(1943968..1944777)
/locus_tag="SF1907"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(1944825..1945163)
/locus_tag="SF1908"
/db_xref="GeneID:1025126"
CDS complement(1944825..1945163)
/locus_tag="SF1908"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_707756.1"
/db_xref="GeneID:1025126"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(1944855..1945124)
/locus_tag="SF1908"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1945366..1945707
/gene="yecE"
/locus_tag="SF1909"
/pseudo
/db_xref="GeneID:1025099"
misc_feature 1945366..1945707
/gene="yecE"
/locus_tag="SF1909"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788175 (273 aa). BLAST with
identity of 99% in 114 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 1945760..1946155
/gene="yecN"
/locus_tag="SF1910"
/db_xref="GeneID:1025096"
CDS 1945760..1946155
/gene="yecN"
/locus_tag="SF1910"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707757.2"
/db_xref="GeneID:1025096"
/translation="MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAI
CIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRS
GMSATWCALLLMVLANLWYMPWELVFSLR"
misc_feature 1945760..1946137
/gene="yecN"
/locus_tag="SF1910"
/note="Uncharacterized membrane protein YecN, MAPEG domain
[Function unknown]; Region: YecN; COG3788"
/db_xref="CDD:443002"
gene 1946196..1946939
/gene="yecO"
/locus_tag="SF1911"
/db_xref="GeneID:1025125"
CDS 1946196..1946939
/gene="yecO"
/locus_tag="SF1911"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="tRNA cmo(5)U34 methyltransferase"
/protein_id="NP_707758.1"
/db_xref="GeneID:1025125"
/translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
HKAGFEHSELWFQCFNFGSLVALKAEDAA"
misc_feature 1946205..1946921
/gene="yecO"
/locus_tag="SF1911"
/note="tRNA (cmo5U34)-methyltransferase; Region:
TIGR00740"
/db_xref="CDD:273244"
misc_feature order(1946382..1946402,1946460..1946465,1946541..1946549,
1946589..1946591)
/gene="yecO"
/locus_tag="SF1911"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 1946936..1947907
/gene="yecP"
/locus_tag="SF1912"
/db_xref="GeneID:1025124"
CDS 1946936..1947907
/gene="yecP"
/locus_tag="SF1912"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="tRNA mo(5)U34 methyltransferase"
/protein_id="NP_707759.1"
/db_xref="GeneID:1025124"
/translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
TVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNID
TEWCSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIVDVC
VTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP"
misc_feature 1946936..1947901
/gene="yecP"
/locus_tag="SF1912"
/note="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
acid(34) synthase CmoB; Region: PRK15068"
/db_xref="CDD:237898"
misc_feature order(1947320..1947340,1947389..1947394,1947470..1947478,
1947521..1947523)
/gene="yecP"
/locus_tag="SF1912"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(1948072..1950501)
/gene="bisZ"
/locus_tag="SF1913"
/db_xref="GeneID:1025121"
CDS complement(1948072..1950501)
/gene="bisZ"
/locus_tag="SF1913"
/note="Code: C; COG: COG0243"
/codon_start=1
/transl_table=11
/product="biotin sulfoxide reductase"
/protein_id="NP_707760.2"
/db_xref="GeneID:1025121"
/translation="MALTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRW
GAMSVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPA
KGRGEDTYVQVSWEQALKLIHEQHERIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQR
YMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQASWPLILENSQVVVLWGMNPL
NTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVA
LMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWTAEITGVPEAQ
IVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYS
NGGNPTRVGGVLPEMSAAIAGQASEAADDGGMTAIPVARIVDALENPGGKYQHNGKEQ
TYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKHADIVLPITTS
FERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIYTEGKDE
MAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRRSEKNEQYVRYGDFRADPVK
NALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDEWKGTADEKQLQLLTAHPAHRLH
SQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLVRVWNKRGQILTGAVVTDGIK
KGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQRANACAGNSALVYIEKYTGNAPK
LTAFDKPAVQA"
misc_feature complement(1950409..1950495)
/gene="bisZ"
/locus_tag="SF1913"
/note="Tat (twin-arginine translocation) pathway signal
sequence; Region: TAT_signal_seq; TIGR01409"
/db_xref="CDD:273604"
misc_feature complement(1948078..1950381)
/gene="bisZ"
/locus_tag="SF1913"
/note="molybdopterin guanine dinucleotide-containing
S/N-oxide reductases; Region: bisC_fam; TIGR00509"
/db_xref="CDD:273110"
gene complement(1950526..1951626)
/gene="yecK"
/locus_tag="SF1914"
/db_xref="GeneID:1025090"
CDS complement(1950526..1951626)
/gene="yecK"
/locus_tag="SF1914"
/note="Code: C; COG: COG3005"
/codon_start=1
/transl_table=11
/product="cytochrome C-type protein"
/protein_id="NP_707761.2"
/db_xref="GeneID:1025090"
/translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS
DDKFETHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGET
CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSRIGELATVNPGTD
LTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALATLSEEGIKALTVNGEWQADE
YGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHASIAADHYTVNAWPSIA
KGMGARTSMSENEPDILTRYFQYNAKDITEKQ"
misc_feature complement(1951105..1951548)
/gene="yecK"
/locus_tag="SF1914"
/note="NapC/NirT cytochrome c family, N-terminal region;
Region: Cytochrom_NNT; pfam03264"
/db_xref="CDD:427224"
misc_feature complement(1950532..1951542)
/gene="yecK"
/locus_tag="SF1914"
/note="trimethylamine-N-oxide reductase c-type cytochrome
TorC; Region: torC; TIGR02162"
/db_xref="CDD:274003"
gene complement(1952014..1952760)
/gene="cutC"
/locus_tag="SF1915"
/db_xref="GeneID:1025143"
CDS complement(1952014..1952760)
/gene="cutC"
/locus_tag="SF1915"
/note="Code: P; COG: COG3142"
/codon_start=1
/transl_table=11
/product="copper homeostasis protein"
/protein_id="NP_707762.3"
/db_xref="GeneID:1025143"
/translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
SVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD
MPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSK
IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
DEHADEYSRYIVDGAAVAEMKGIIERHQAK"
misc_feature complement(1952017..1952760)
/gene="cutC"
/locus_tag="SF1915"
/note="copper homeostasis protein CutC; Provisional;
Region: PRK11572"
/db_xref="CDD:183208"
gene complement(1952774..1953340)
/gene="yecM"
/locus_tag="SF1916"
/db_xref="GeneID:1025111"
CDS complement(1952774..1953340)
/gene="yecM"
/locus_tag="SF1916"
/note="Code: S; COG: COG3102"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707763.2"
/db_xref="GeneID:1025111"
/translation="MANWQSIDELQDIASDLPRFTHALDELSRRLGLDITPLTADHIS
LRCHQNVTAERWRRGFEQCGELLSEKMINGRPICLFKLHEPVQVAHWQFSNVELPWPG
EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNP
TLAVTDGKTTIKFHPWSIEEIVASEQSA"
misc_feature complement(1952780..1953340)
/gene="yecM"
/locus_tag="SF1916"
/note="VOC family protein; Region: PRK11700"
/db_xref="CDD:236957"
gene 1953556..1955289
/gene="argS"
/locus_tag="SF1917"
/db_xref="GeneID:1025108"
CDS 1953556..1955289
/gene="argS"
/locus_tag="SF1917"
/note="Code: J; COG: COG0018"
/codon_start=1
/transl_table=11
/product="arginyl-tRNA synthetase"
/protein_id="NP_707764.1"
/db_xref="GeneID:1025108"
/translation="MNIQALLSEKVRQAMIAAGAPADCEPQIRQSAKVQFGDYQANGM
MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
DRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVIRANHVG
DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
SGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
LAVESEGATVVFLDVFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
AFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLT
VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
DTLGIETVERM"
misc_feature 1953556..1955286
/gene="argS"
/locus_tag="SF1917"
/note="Arginyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: ArgS; COG0018"
/db_xref="CDD:439789"
gene 1955466..1955954
/gene="yecT"
/locus_tag="SF1918"
/db_xref="GeneID:1025110"
CDS 1955466..1955954
/gene="yecT"
/locus_tag="SF1918"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707765.1"
/db_xref="GeneID:1025110"
/translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDTSAIKDCWQKNSDDDT
DINVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGAKKLDTEQLNLLKKSQRAWL
DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLT
RG"
misc_feature 1955475..1955918
/gene="yecT"
/locus_tag="SF1918"
/note="Uncharacterized conserved protein YecT, DUF1311
family [Function unknown]; Region: YecT; COG3755"
/db_xref="CDD:442969"
mobile_element complement(1956132..1956562)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(1956174..1957046)
/locus_tag="SF1919"
/pseudogene="unknown"
/db_xref="GeneID:1025085"
mobile_element complement(1956563..1957423)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(1957043..1957369)
/locus_tag="SF1921"
/db_xref="GeneID:1025098"
CDS complement(1957043..1957369)
/locus_tag="SF1921"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_707768.1"
/db_xref="GeneID:1025098"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWVRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNNILRLASAYFAKAEF
DRLWKK"
misc_feature complement(1957079..1957366)
/locus_tag="SF1921"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(1957421..1957759)
/gene="flhE"
/locus_tag="SF1922"
/db_xref="GeneID:1023687"
CDS complement(1957421..1957759)
/gene="flhE"
/locus_tag="SF1922"
/codon_start=1
/transl_table=11
/product="flagellar protein FlhE"
/protein_id="NP_707769.2"
/db_xref="GeneID:1023687"
/translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS
ARQPASGLMTLVAWRYQLIGPTPAGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL
RFIWEVPGGG"
misc_feature complement(1957424..1957678)
/gene="flhE"
/locus_tag="SF1922"
/note="Flagellar protein FlhE; Region: FlhE; pfam06366"
/db_xref="CDD:428903"
gene complement(1957761..1959836)
/gene="flhA"
/locus_tag="SF1923"
/pseudo
/db_xref="GeneID:1025167"
misc_feature complement(1957761..1959836)
/gene="flhA"
/locus_tag="SF1923"
/note="Similar to Escherichia coli K12 flagellar
biosynthesis; possible export of flagellar proteins gi:
1788187 (693 aa). BLAST with identity of 99% in 691 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(1959783..1960976)
/gene="flhB"
/locus_tag="SF1924"
/db_xref="GeneID:1025091"
CDS complement(1959783..1960976)
/gene="flhB"
/locus_tag="SF1924"
/note="Code: N; COG: COG1377"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FlhB"
/protein_id="NP_707770.1"
/db_xref="GeneID:1025091"
/translation="MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSV
IWFGGVSLARRLSGMLSAGLHFDHSIIKDPNLILGQIILLIREAMLALLPLISGVVLV
ALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRIFSAQTSAELLKAILKTILVGSVTG
FFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKK
LRMSRQDIRDEFKQSEGDPHVKGRICQMQRAAARRRMMADVPKADVIVNNPTHYSVAL
QYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQ
LYAAVAEVLAWVWQLKRWRLAGGQRPVHLLIFRCRQPWILLTRNRPMSNLAAMLRLPA
NLKST"
misc_feature complement(1959903..1960976)
/gene="flhB"
/locus_tag="SF1924"
/note="flagellar type III secretion system protein FlhB;
Region: flhB; PRK05702"
/db_xref="CDD:235569"
mobile_element complement(1961597..1962845)
/mobile_element_type="insertion sequence:IS911"
gene complement(1961605..1962444)
/locus_tag="SF1925"
/db_xref="GeneID:1027577"
CDS complement(1961605..1962444)
/locus_tag="SF1925"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_707771.1"
/db_xref="GeneID:1027577"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(1961614..1962423)
/locus_tag="SF1925"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(1962471..1962809)
/locus_tag="SF1926"
/db_xref="GeneID:1025159"
CDS complement(1962471..1962809)
/locus_tag="SF1926"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_707772.1"
/db_xref="GeneID:1025159"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(1962501..1962770)
/locus_tag="SF1926"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 1962914..1963309
/locus_tag="SF1927"
/db_xref="GeneID:1025093"
CDS 1962914..1963309
/locus_tag="SF1927"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707773.1"
/db_xref="GeneID:1025093"
/translation="MNVVSNTQLLEQRIADFFTLSDEHKKARVLLDTLACSCPARIFG
GMVRDLGLYGVDGFSSDLDIVIGRSREELFQTLAELPVKQLRFNKFGGIRFRYHDFEF
DIWNLNETWAFQEKLIFCEDESSLLNEVA"
mobile_element 1963297..1964560
/mobile_element_type="insertion sequence:IS600"
gene 1963699..1964517
/locus_tag="SF1928"
/db_xref="GeneID:1025097"
CDS 1963699..1964517
/locus_tag="SF1928"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707774.1"
/db_xref="GeneID:1025097"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHYSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <1963699..1964490
/locus_tag="SF1928"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(1965021..1965665)
/gene="cheZ"
/locus_tag="SF1930"
/db_xref="GeneID:1025145"
CDS complement(1965021..1965665)
/gene="cheZ"
/locus_tag="SF1930"
/note="Code: N; COG: COG3143"
/codon_start=1
/transl_table=11
/product="chemotaxis regulator CheZ"
/protein_id="NP_707776.2"
/db_xref="GeneID:1025145"
/translation="MMQPSIKPADEHSAGDIIARIGSLTHMLRDSLRELGLVQAIAEA
AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
DLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF"
misc_feature complement(1965024..1965665)
/gene="cheZ"
/locus_tag="SF1930"
/note="chemotaxis regulator CheZ; Provisional; Region:
PRK11166"
/db_xref="CDD:236868"
gene complement(1965676..1966065)
/gene="cheY"
/locus_tag="SF1931"
/db_xref="GeneID:1025094"
CDS complement(1965676..1966065)
/gene="cheY"
/locus_tag="SF1931"
/note="Code: T; COG: COG0784"
/codon_start=1
/transl_table=11
/product="chemotaxis regulatory protein CheY"
/protein_id="NP_707777.1"
/db_xref="GeneID:1025094"
/translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
ASGYVVKPFTAATLEEKLNKIFEKLGM"
misc_feature complement(1965679..1966065)
/gene="cheY"
/locus_tag="SF1931"
/note="chemotaxis protein CheY; Region: PRK10610"
/db_xref="CDD:170568"
gene complement(1966080..1967129)
/gene="cheB"
/locus_tag="SF1932"
/db_xref="GeneID:1025137"
CDS complement(1966080..1967129)
/gene="cheB"
/locus_tag="SF1932"
/note="Code: NT; COG: COG2201"
/codon_start=1
/transl_table=11
/product="chemotaxis-specific methylesterase"
/protein_id="NP_707778.1"
/db_xref="GeneID:1025137"
/translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA
IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
RVLPGHAYIAPGDRHMELARSGANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAV
GVILTGMGNDGAAGMLAMRQAGAWTLAQNEASCVVFGMPREAINMGGVCEVVDLSQVS
QQMLATISAGQAIRI"
misc_feature complement(1966095..1967129)
/gene="cheB"
/locus_tag="SF1932"
/note="chemotaxis-specific protein-glutamate
methyltransferase CheB; Region: PRK00742"
/db_xref="CDD:234828"
gene complement(1967132..1967992)
/gene="cheR"
/locus_tag="SF1933"
/db_xref="GeneID:1025135"
CDS complement(1967132..1967992)
/gene="cheR"
/locus_tag="SF1933"
/note="Code: NT; COG: COG1352"
/codon_start=1
/transl_table=11
/product="chemotaxis methyltransferase CheR"
/protein_id="NP_707779.1"
/db_xref="GeneID:1025135"
/translation="MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLAD
HKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHH
FPLLADHARRRSGEDRVWSAAASTGEEPYSIAMTLADTLGTVPGRWKVFASDIDTEVL
EKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQY
TVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLR
GQTVYALSKD"
misc_feature complement(1967135..1967992)
/gene="cheR"
/locus_tag="SF1933"
/note="protein-glutamate O-methyltransferase CheR; Region:
PRK10611"
/db_xref="CDD:236725"
gene complement(1968011..1969612)
/gene="tap"
/locus_tag="SF1934"
/db_xref="GeneID:1025109"
CDS complement(1968011..1969612)
/gene="tap"
/locus_tag="SF1934"
/note="Code: N; COG: COG0840"
/codon_start=1
/transl_table=11
/product="methyl-accepting protein IV"
/protein_id="NP_707780.2"
/db_xref="GeneID:1025109"
/translation="MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNHGE
QSNQQRAALAQTRAVMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFK
SFMAMTAGNEHVRALQKETEKSFARWHNDLEHQATWLESNQLSDFLTAPVQGSQNAFD
VNFEAWQLEINHVLEAASAQSQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPL
AIIGSHFDSIAAGNLARPIAVYGRNEITAIFASLKTMQQALRGTVSDVRKGSHEMHIG
IAEIVAGNNDLSSRTEQQAASLAQTAASMEQLTATVGQNADNARQASELAKNAATTAQ
AGGVQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGF
AVVAGEVRNLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMTDIVSSVTRVND
IMGEIASASEEQRRGIEQVAQAVSQMDQVTQQNSSLVEEAAVATEQLANQADHLSSRV
AVFTLEEHEVARHESAQLQIAPVVS"
misc_feature complement(1968014..1969612)
/gene="tap"
/locus_tag="SF1934"
/note="methyl-accepting chemotaxis protein IV; Region:
PRK09793"
/db_xref="CDD:182079"
misc_feature complement(order(1968143..1968148,1968155..1968157,
1968164..1968169,1968176..1968178,1968185..1968190,
1968194..1968199,1968206..1968211,1968215..1968220,
1968227..1968229,1968236..1968241,1968248..1968250,
1968257..1968262,1968269..1968274,1968278..1968283,
1968290..1968292,1968299..1968304,1968311..1968313,
1968320..1968325,1968362..1968367,1968374..1968379,
1968383..1968388,1968395..1968400,1968407..1968409,
1968416..1968421,1968428..1968430,1968437..1968439,
1968449..1968451,1968470..1968472,1968479..1968481,
1968491..1968493,1968500..1968505,1968512..1968514,
1968521..1968523,1968530..1968535,1968542..1968547,
1968554..1968556,1968563..1968568,1968572..1968574,
1968584..1968589,1968593..1968598,1968605..1968607,
1968614..1968619,1968626..1968631,1968638..1968640,
1968647..1968652,1968659..1968661,1968668..1968673,
1968677..1968682,1968689..1968691,1968698..1968703,
1968710..1968715))
/gene="tap"
/locus_tag="SF1934"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature complement(1968404..1968505)
/gene="tap"
/locus_tag="SF1934"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene complement(1969658..1971319)
/gene="tar"
/locus_tag="SF1935"
/db_xref="GeneID:1025140"
CDS complement(1969658..1971319)
/gene="tar"
/locus_tag="SF1935"
/note="Code: N; COG: COG0840"
/codon_start=1
/transl_table=11
/product="methyl-accepting chemotaxis protein II"
/protein_id="NP_707781.2"
/db_xref="GeneID:1025140"
/translation="MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSN
QLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAAT
HYKKFKSMAPLPEMVATSRNFDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNA
MGEAFAQYALSSEKLYRDIVTDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLT
PLAKIIAHICEIAGGNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIY
AGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDT
AQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR
GFAVVAGEVRNLASRSALAAKEIKALIEDSVSRIDTGSVLVESAGETMNNIVNAVTRV
TDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQ
AVSAFRLAASPLTNKPQTPSRPASEQPPAQPRLRITEQDPNWETF"
misc_feature complement(1969661..1971319)
/gene="tar"
/locus_tag="SF1935"
/note="methyl-accepting chemotaxis protein II;
Provisional; Region: PRK15048"
/db_xref="CDD:185008"
misc_feature complement(order(1969856..1969858,1969865..1969870,
1969877..1969879,1969886..1969891,1969895..1969900,
1969907..1969912,1969916..1969921,1969928..1969930,
1969937..1969942,1969949..1969951,1969958..1969963,
1969970..1969975,1969979..1969984,1969991..1969993,
1970000..1970005,1970012..1970014,1970021..1970026,
1970063..1970068,1970075..1970080,1970084..1970089,
1970096..1970101,1970108..1970110,1970117..1970122,
1970129..1970131,1970138..1970140,1970150..1970152,
1970171..1970173,1970180..1970182,1970192..1970194,
1970201..1970206,1970213..1970215,1970222..1970224,
1970231..1970236,1970243..1970248,1970255..1970257,
1970264..1970269,1970273..1970275,1970285..1970290,
1970294..1970299,1970306..1970308,1970315..1970320,
1970327..1970332,1970339..1970341,1970348..1970353,
1970360..1970362,1970369..1970374,1970378..1970383,
1970390..1970392,1970399..1970404,1970411..1970416))
/gene="tar"
/locus_tag="SF1935"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:206779"
misc_feature complement(1970105..1970206)
/gene="tar"
/locus_tag="SF1935"
/note="putative CheW interface [polypeptide binding];
other site"
/db_xref="CDD:206779"
gene complement(1971464..1971967)
/gene="cheW"
/locus_tag="SF1936"
/db_xref="GeneID:1023709"
CDS complement(1971464..1971967)
/gene="cheW"
/locus_tag="SF1936"
/note="Code: N; COG: COG0835"
/codon_start=1
/transl_table=11
/product="purine-binding chemotaxis protein"
/protein_id="NP_707782.1"
/db_xref="GeneID:1023709"
/translation="MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQ
VTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVV
DGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLD
SAASEVA"
misc_feature complement(1971467..1971967)
/gene="cheW"
/locus_tag="SF1936"
/note="chemotaxis protein CheW; Region: PRK10612"
/db_xref="CDD:182587"
misc_feature complement(order(1971503..1971526,1971683..1971685,
1971689..1971691,1971773..1971790))
/gene="cheW"
/locus_tag="SF1936"
/note="putative CheA interaction surface [active]"
/db_xref="CDD:238374"
gene complement(1971988..1973952)
/gene="cheA"
/locus_tag="SF1937"
/db_xref="GeneID:1025139"
CDS complement(1971988..1973952)
/gene="cheA"
/locus_tag="SF1937"
/note="Code: N; COG: COG0643"
/codon_start=1
/transl_table=11
/product="chemotaxis protein CheA"
/protein_id="NP_707783.2"
/db_xref="GeneID:1025139"
/translation="MSIDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF
RAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL
DAYKQSQEPDAASYDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQLPR
RIILSRLKAGEVDLLEEELGHLTTLNDVVKGADSLSAILPGDIAEDDITAVLCFVIEA
DQITFETVEVSPKIATPPVLKLAAEQAPTGRVEREKTTRSSESTSIRVAVEKVDQLIN
LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS
RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR
LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV
AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTTIRILLPLT
LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK
VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT
ILGDGSVALIVDVSALQAINREQRMANTAA"
misc_feature complement(1971991..1973946)
/gene="cheA"
/locus_tag="SF1937"
/note="chemotaxis protein CheA; Provisional; Region:
PRK10547"
/db_xref="CDD:236712"
gene complement(1973957..1974883)
/gene="motB"
/locus_tag="SF1938"
/db_xref="GeneID:1025131"
CDS complement(1973957..1974883)
/gene="motB"
/locus_tag="SF1938"
/note="Code: N; COG: COG1360"
/codon_start=1
/transl_table=11
/product="flagellar motor protein MotB"
/protein_id="NP_707784.1"
/db_xref="GeneID:1025131"
/translation="MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVM
WLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPN
IEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRLHLKIDLVQEGLRIQIIDSQNRPM
FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRA
NASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHE
NAESQNEPVSALEKPEVAPQVSVPTMPSAEPR"
misc_feature complement(1973960..1974883)
/gene="motB"
/locus_tag="SF1938"
/note="motility protein MotB; Region: motB; PRK09041"
/db_xref="CDD:236365"
gene complement(1974880..1975767)
/gene="motA"
/locus_tag="SF1939"
/db_xref="GeneID:1025123"
CDS complement(1974880..1975767)
/gene="motA"
/locus_tag="SF1939"
/note="Code: N; COG: COG1291"
/codon_start=1
/transl_table=11
/product="flagellar motor protein MotA"
/protein_id="NP_707785.1"
/db_xref="GeneID:1025123"
/translation="MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGS
FIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIE
NPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEV
PANSLALVGDSLPAFGIVAAVMGGVHALGSADRPAAELGALIAHAMVGTFLGILLAYG
FISPLASVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIEL
EEHVRAVKNPQQQTTTEEA"
misc_feature complement(1974919..1975767)
/gene="motA"
/locus_tag="SF1939"
/note="flagellar motor stator protein MotA; Region:
PRK09110"
/db_xref="CDD:181655"
gene complement(1975894..1976472)
/gene="flhC"
/locus_tag="SF1940"
/db_xref="GeneID:1025138"
CDS complement(1975894..1976472)
/gene="flhC"
/locus_tag="SF1940"
/codon_start=1
/transl_table=11
/product="transcriptional activator FlhC"
/protein_id="NP_707786.1"
/db_xref="GeneID:1025138"
/translation="MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLY
KELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLY
LEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLC
QPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV"
misc_feature complement(1975912..1976472)
/gene="flhC"
/locus_tag="SF1940"
/note="flagellar transcriptional regulator FlhC; Region:
PRK12722"
/db_xref="CDD:237181"
mobile_element 1976680..1977447
/mobile_element_type="insertion sequence:IS1"
gene 1976735..1977010
/gene="insA"
/locus_tag="SF1941"
/db_xref="GeneID:1025112"
CDS 1976735..1977010
/gene="insA"
/locus_tag="SF1941"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707787.1"
/db_xref="GeneID:1025112"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 1976756..>1977007
/gene="insA"
/locus_tag="SF1941"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 1977037..1977432
/gene="insB"
/locus_tag="SF1942"
/db_xref="GeneID:1025134"
CDS 1977037..1977432
/gene="insB"
/locus_tag="SF1942"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707788.1"
/db_xref="GeneID:1025134"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 1977040..1977429
/gene="insB"
/locus_tag="SF1942"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(1977451..1977895)
/gene="otsA"
/locus_tag="SF1943"
/pseudo
/db_xref="GeneID:1025129"
misc_feature complement(1977451..1977895)
/gene="otsA"
/locus_tag="SF1943"
/note="Similar to Escherichia coli K12
trehalose-6-phosphate synthase gi: 1788206 (475 aa). BLAST
with identity of 97% in 148 aa. This CDS has been
truncated. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(1977870..1978670)
/gene="otsB"
/locus_tag="SF1944"
/db_xref="GeneID:1025133"
CDS complement(1977870..1978670)
/gene="otsB"
/locus_tag="SF1944"
/note="Code: G; COG: COG1877"
/codon_start=1
/transl_table=11
/product="trehalose-6-phosphate phosphatase"
/protein_id="NP_707789.2"
/db_xref="GeneID:1025133"
/translation="MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQG
LQLLATASDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAI
ARDISVQLHTVIAQYPGAELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQ
QGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVK
IGTGATQASWRLAGVPDVWSWLEMITAALQQKRENNRSDDYESFSRSI"
misc_feature complement(1977873..1978670)
/gene="otsB"
/locus_tag="SF1944"
/note="trehalose-6-phosphate phosphatase; Provisional;
Region: PRK10187"
/db_xref="CDD:182291"
misc_feature complement(order(1978065..1978070,1978077..1978082,
1978146..1978148,1978170..1978172,1978176..1978178,
1978182..1978184,1978269..1978271,1978275..1978277,
1978281..1978283,1978296..1978298,1978302..1978304,
1978425..1978427,1978485..1978493,1978575..1978577,
1978587..1978592,1978599..1978613))
/gene="otsB"
/locus_tag="SF1944"
/note="active site"
/db_xref="CDD:319767"
misc_feature complement(order(1978065..1978070,1978074..1978082,
1978146..1978148,1978164..1978166,1978170..1978172,
1978176..1978178,1978182..1978184,1978275..1978277,
1978281..1978283,1978296..1978298,1978302..1978304,
1978425..1978430,1978461..1978466,1978479..1978481,
1978485..1978493,1978575..1978577,1978587..1978589,
1978599..1978613))
/gene="otsB"
/locus_tag="SF1944"
/note="active site pocket [active]"
/db_xref="CDD:319767"
gene complement(1978837..1979826)
/gene="araH"
/locus_tag="SF1945"
/db_xref="GeneID:1025166"
CDS complement(1978837..1979826)
/gene="araH"
/locus_tag="SF1945"
/note="Code: G; COG: COG1172"
/codon_start=1
/transl_table=11
/product="L-arabinose transporter permease"
/protein_id="NP_707790.1"
/db_xref="GeneID:1025166"
/translation="MMSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVP
NFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTES
LWIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIED
ESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPV
VRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGK
ISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
misc_feature complement(1978840..1979823)
/gene="araH"
/locus_tag="SF1945"
/note="L-arabinose transporter permease protein;
Provisional; Region: araH; PRK11285"
/db_xref="CDD:183076"
misc_feature complement(1979146..1979202)
/gene="araH"
/locus_tag="SF1945"
/note="TM-ABC transporter signature motif [active]"
/db_xref="CDD:119321"
gene complement(1979838..1981352)
/gene="araG"
/locus_tag="SF1946"
/db_xref="GeneID:1025151"
CDS complement(1979838..1981352)
/gene="araG"
/locus_tag="SF1946"
/note="Code: G; COG: COG1129"
/codon_start=1
/transl_table=11
/product="L-arabinose transporter ATP-binding protein"
/protein_id="NP_707791.2"
/db_xref="GeneID:1025151"
/translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLAIGQWQMVEIAKALAR
NAKIIAFDEPTSSLSAREIGNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKALGVRTPIS
LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
LCPEARKAEGIIPVHSVRDNINISARRKHVLGGCVINNSWEENNADQHIRSLNIKTPG
AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
AVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA"
misc_feature complement(1979841..1981343)
/gene="araG"
/locus_tag="SF1946"
/note="L-arabinose ABC transporter ATP-binding protein
AraG; Region: araG; PRK11288"
/db_xref="CDD:183077"
gene complement(1981422..1982411)
/gene="araF"
/locus_tag="SF1947"
/pseudo
/db_xref="GeneID:1025202"
misc_feature complement(1981422..1982411)
/gene="araF"
/locus_tag="SF1947"
/note="Similar to Escherichia coli K12 L-arabinose-binding
periplasmic protein gi: 1788211 (330 aa). BLAST with
identity of 97% in 329 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 1983208..1983711
/gene="yecI"
/locus_tag="SF1948"
/db_xref="GeneID:1025142"
CDS 1983208..1983711
/gene="yecI"
/locus_tag="SF1948"
/note="Code: P; COG: COG1528"
/codon_start=1
/transl_table=11
/product="ferritin"
/protein_id="NP_707792.1"
/db_xref="GeneID:1025142"
/translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
VVSHQLH"
misc_feature 1983208..1983708
/gene="yecI"
/locus_tag="SF1948"
/note="non-heme ferritin-like protein; Region: PRK15022"
/db_xref="CDD:184983"
misc_feature order(1983256..1983258,1983352..1983357,1983364..1983366,
1983487..1983489,1983583..1983585,1983592..1983597)
/gene="yecI"
/locus_tag="SF1948"
/note="ferroxidase diiron center [ion binding]; other
site"
/db_xref="CDD:153113"
gene complement(1983791..1984042)
/locus_tag="SF1950a"
/db_xref="GeneID:16608336"
CDS complement(1983791..1984042)
/locus_tag="SF1950a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439259.1"
/db_xref="GeneID:16608336"
/translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
LKNIDFTHHPAAADPVTMRAIQKAIALIELKFTPQGESH"
misc_feature complement(1983806..1984042)
/locus_tag="SF1950a"
/note="Protein of unknown function (DUF2766); Region:
DUF2766; pfam10964"
/db_xref="CDD:431561"
gene 1984506..1984829
/locus_tag="SF1950"
/db_xref="GeneID:1025132"
CDS 1984506..1984829
/locus_tag="SF1950"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707794.1"
/db_xref="GeneID:1025132"
/translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
HAHTDRYVSRGIADRACQQEGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
FPVFL"
misc_feature 1984581..1984799
/locus_tag="SF1950"
/note="YecR-like lipoprotein; Region: YecR; pfam13992"
/db_xref="CDD:404813"
gene 1985000..1985497
/gene="ftn"
/locus_tag="SF1951"
/db_xref="GeneID:1027444"
CDS 1985000..1985497
/gene="ftn"
/locus_tag="SF1951"
/note="Code: P; COG: COG1528"
/codon_start=1
/transl_table=11
/product="ferritin"
/protein_id="NP_707795.2"
/db_xref="GeneID:1027444"
/translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
RHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
LDTQN"
misc_feature 1985000..1985494
/gene="ftn"
/locus_tag="SF1951"
/note="non-heme ferritin; Region: PRK10304"
/db_xref="CDD:182367"
misc_feature order(1985048..1985050,1985144..1985149,1985156..1985158,
1985279..1985281,1985375..1985377,1985384..1985389)
/gene="ftn"
/locus_tag="SF1951"
/note="ferroxidase diiron center [ion binding]; other
site"
/db_xref="CDD:153113"
gene complement(1985534..1985773)
/gene="yecH"
/locus_tag="SF1952"
/db_xref="GeneID:1025184"
CDS complement(1985534..1985773)
/gene="yecH"
/locus_tag="SF1952"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707796.1"
/db_xref="GeneID:1025184"
/translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
EGVTAGELVAFLAAKGKFIPSEEGFSTDQSKICRH"
misc_feature complement(1985537..1985767)
/gene="yecH"
/locus_tag="SF1952"
/note="probable metal-binding protein; Region:
matur_matur; TIGR03853"
/db_xref="CDD:163565"
gene 1985963..1987174
/gene="tyrP"
/locus_tag="SF1953"
/db_xref="GeneID:1025130"
CDS 1985963..1987174
/gene="tyrP"
/locus_tag="SF1953"
/note="Code: E; COG: COG0814"
/codon_start=1
/transl_table=11
/product="tyrosine transporter TyrP"
/protein_id="NP_707797.1"
/db_xref="GeneID:1025130"
/translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVF
IIGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
LIAAGLLPEVG"
misc_feature 1985963..1987171
/gene="tyrP"
/locus_tag="SF1953"
/note="tyrosine transporter TyrP; Provisional; Region:
PRK15132"
/db_xref="CDD:185086"
gene complement(1987236..1987901)
/gene="yecA"
/locus_tag="SF1954"
/db_xref="GeneID:1025148"
CDS complement(1987236..1987901)
/gene="yecA"
/locus_tag="SF1954"
/note="Code: R; COG: COG3318"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707798.1"
/db_xref="GeneID:1025148"
/translation="MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSP
QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFG
LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS
PEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC
CLH"
misc_feature complement(1987239..1987901)
/gene="yecA"
/locus_tag="SF1954"
/note="hypothetical protein; Provisional; Region:
PRK10396"
/db_xref="CDD:236680"
gene complement(1988097..1988183)
/locus_tag="SF4474"
/db_xref="GeneID:3161825"
tRNA complement(1988097..1988183)
/locus_tag="SF4474"
/product="tRNA-Leu"
/codon_recognized="UUA"
/db_xref="GeneID:3161825"
gene complement(1988196..1988269)
/locus_tag="SF4475"
/db_xref="GeneID:3161823"
tRNA complement(1988196..1988269)
/locus_tag="SF4475"
/product="tRNA-Cys"
/codon_recognized="UGC"
/db_xref="GeneID:3161823"
gene complement(1988324..1988399)
/locus_tag="SF4476"
/db_xref="GeneID:3161822"
tRNA complement(1988324..1988399)
/locus_tag="SF4476"
/product="tRNA-Gly"
/codon_recognized="GGC"
/db_xref="GeneID:3161822"
gene complement(1988551..1989099)
/gene="pgsA"
/locus_tag="SF1955"
/db_xref="GeneID:1025192"
CDS complement(1988551..1989099)
/gene="pgsA"
/locus_tag="SF1955"
/note="Code: I; COG: COG0558"
/codon_start=1
/transl_table=11
/product="phosphatidylglycerophosphate synthetase"
/protein_id="NP_707799.1"
/db_xref="GeneID:1025192"
/translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV
TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYVGIALFFVA
AVLTLWSMLQYLSAARADLLDQ"
misc_feature complement(1988554..1989099)
/gene="pgsA"
/locus_tag="SF1955"
/note="CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase; Region: PRK10832"
/db_xref="CDD:182763"
gene complement(1989156..1990922)
/gene="uvrC"
/locus_tag="SF1956"
/db_xref="GeneID:1025141"
CDS complement(1989156..1990922)
/gene="uvrC"
/locus_tag="SF1956"
/note="Code: L; COG: COG0322"
/codon_start=1
/transl_table=11
/product="excinuclease ABC subunit C"
/protein_id="NP_707800.4"
/db_xref="GeneID:1025141"
/translation="MYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQI
DVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHA
KGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGL
VSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAACIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVET
FVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLK
LARTNAATALTSKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVV
FDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQL
AQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVI
QHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVE
EIAKVPGISQGLAEKIFWSLKH"
misc_feature complement(1989159..1990922)
/gene="uvrC"
/locus_tag="SF1956"
/note="excinuclease ABC subunit UvrC; Region: uvrC;
PRK00558"
/db_xref="CDD:234792"
gene complement(1990985..1991641)
/gene="uvrY"
/locus_tag="SF1957"
/db_xref="GeneID:1025182"
CDS complement(1990985..1991641)
/gene="uvrY"
/locus_tag="SF1957"
/note="Code: TK; COG: COG2197"
/codon_start=1
/transl_table=11
/product="response regulator"
/protein_id="NP_707801.1"
/db_xref="GeneID:1025182"
/translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
"
misc_feature complement(1990988..1991641)
/gene="uvrY"
/locus_tag="SF1957"
/note="response regulator; Provisional; Region: PRK09483"
/db_xref="CDD:236538"
gene 1992100..1992324
/gene="yecF"
/locus_tag="SF1958"
/db_xref="GeneID:1025152"
CDS 1992100..1992324
/gene="yecF"
/locus_tag="SF1958"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707802.1"
/db_xref="GeneID:1025152"
/translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
misc_feature 1992100..1992321
/gene="yecF"
/locus_tag="SF1958"
/note="DUF2594 family protein; Region: PRK10613"
/db_xref="CDD:182588"
gene complement(1992351..1992977)
/gene="sdiA"
/locus_tag="SF1959"
/db_xref="GeneID:1025188"
CDS complement(1992351..1992977)
/gene="sdiA"
/locus_tag="SF1959"
/note="Code: K; COG: COG2771"
/codon_start=1
/transl_table=11
/product="ftsQAZ gene cluster transcriptional regulator"
/protein_id="NP_707803.2"
/db_xref="GeneID:1025188"
/translation="MQDTDFFSWRRTMLLRFQRMEAAEEAYHEIELQAQQLEYDYYSL
CVRHPVPFTRPKVAFYTNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE
AQPLWEAAHAHGLRRGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRE
SLMALMRLNDEIVMTPEMNFSKREKEILKWTAEGKTSAEIAMILSITG"
misc_feature complement(1992357..1992977)
/gene="sdiA"
/locus_tag="SF1959"
/note="transcriptional regulator SdiA; Region: PRK10188"
/db_xref="CDD:182292"
gene complement(1993207..1993959)
/gene="yecC"
/locus_tag="SF1960"
/db_xref="GeneID:1025183"
CDS complement(1993207..1993959)
/gene="yecC"
/locus_tag="SF1960"
/note="Code: E; COG: COG1126"
/codon_start=1
/transl_table=11
/product="amino acid ABC transporter ATP-binding protein
YecC"
/protein_id="NP_707804.1"
/db_xref="GeneID:1025183"
/translation="MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
QGRIVEQGAAKALFADPQQPRTRQFLEKLLLQ"
misc_feature complement(1993210..1993959)
/gene="yecC"
/locus_tag="SF1960"
/note="putative amino-acid ABC transporter ATP-binding
protein YecC; Provisional; Region: PRK11264"
/db_xref="CDD:183063"
gene complement(1993956..1994624)
/gene="yecS"
/locus_tag="SF1961"
/db_xref="GeneID:1025176"
CDS complement(1993956..1994624)
/gene="yecS"
/locus_tag="SF1961"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="amino acid ABC transporter permease"
/protein_id="NP_707805.1"
/db_xref="GeneID:1025176"
/translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR
LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAY
AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE
REPK"
misc_feature complement(1993965..1994624)
/gene="yecS"
/locus_tag="SF1961"
/note="cystine ABC transporter permease; Region: PRK15100"
/db_xref="CDD:185055"
misc_feature complement(order(1994013..1994015,1994022..1994027,
1994034..1994039,1994043..1994048,1994055..1994060,
1994088..1994093,1994130..1994135,1994142..1994153,
1994172..1994174,1994181..1994186,1994226..1994228,
1994277..1994279,1994286..1994291,1994301..1994303,
1994307..1994312,1994319..1994321,1994325..1994327,
1994331..1994336,1994400..1994402,1994406..1994411,
1994418..1994447,1994451..1994462,1994490..1994492,
1994505..1994510,1994517..1994522))
/gene="yecS"
/locus_tag="SF1961"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(1994136..1994153,1994400..1994444))
/gene="yecS"
/locus_tag="SF1961"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(1994058..1994060,1994088..1994090,
1994097..1994099,1994133..1994135,1994349..1994351,
1994400..1994402))
/gene="yecS"
/locus_tag="SF1961"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(1994205..1994207,1994217..1994222,
1994238..1994276))
/gene="yecS"
/locus_tag="SF1961"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(1994639..1995721)
/gene="yedO"
/locus_tag="SF1962"
/db_xref="GeneID:1025173"
CDS complement(1994639..1995721)
/gene="yedO"
/locus_tag="SF1962"
/note="Code: E; COG: COG2515"
/codon_start=1
/transl_table=11
/product="1-aminocyclopropane-1-carboxylate deaminase"
/protein_id="NP_707806.3"
/db_xref="GeneID:1025173"
/translation="MTKKGAFTSAFFIYAFSACIIRKSQQHTSEAVMPLHNLTRFPRL
EFIGAPTPLEYLPRFSDYLGREIFIKRDEVTPMAMGGNKLRKLEFLAADALREGADTL
ITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM
CDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQCEGAVNI
SSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKELEL
TASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQK
RFKDEGPILFIHTGGAPALFAYHPHV"
misc_feature complement(1994642..1995616)
/gene="yedO"
/locus_tag="SF1962"
/note="D-cysteine desulfhydrase; Validated; Region:
PRK03910"
/db_xref="CDD:179673"
misc_feature complement(order(1994675..1994683,1995032..1995046,
1995389..1995391,1995464..1995466,1995473..1995478))
/gene="yedO"
/locus_tag="SF1962"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:107210"
misc_feature complement(1995473..1995475)
/gene="yedO"
/locus_tag="SF1962"
/note="catalytic residue [active]"
/db_xref="CDD:107210"
gene complement(1995730..1996587)
/locus_tag="SF1963"
/db_xref="GeneID:1025171"
CDS complement(1995730..1996587)
/locus_tag="SF1963"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="cystine transporter subunit"
/protein_id="NP_707807.1"
/db_xref="GeneID:1025171"
/translation="MFTNNGSTLQTDITTFGVNMKLAHLGRQALMGVMAVALVAGMSV
KSFADEGLLNKVKESGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEAS
LKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTI
KTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRL
AALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSE
KWFGADVTK"
misc_feature complement(1995733..1996530)
/locus_tag="SF1963"
/note="cystine ABC transporter substrate-binding protein;
Region: PRK11260"
/db_xref="CDD:183061"
gene complement(1996618..1997205)
/gene="fliZ"
/locus_tag="SF1964"
/db_xref="GeneID:1025174"
CDS complement(1996618..1997205)
/gene="fliZ"
/locus_tag="SF1964"
/codon_start=1
/transl_table=11
/product="flagella biosynthesis protein FliZ"
/protein_id="NP_707808.1"
/db_xref="GeneID:1025174"
/translation="MPHFNFDYQEFLMMVQHLKRRPLSRYLKDFKHSQTHCAHCRKLL
DRITLVRDGKIVNKIEISRLDTLLDEKGWQTEQQSWAALCRFCGDLHCKTQSDFFDII
GFKKFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTS
TNNYRIALRKYQHYQRQTCTGLVQKSSSLPASDIY"
misc_feature complement(1996666..1997169)
/gene="fliZ"
/locus_tag="SF1964"
/note="flagella biosynthesis regulatory protein FliZ;
Region: PRK11582"
/db_xref="CDD:183213"
gene complement(1997215..1997934)
/gene="fliA"
/locus_tag="SF1965"
/pseudo
/db_xref="GeneID:1025175"
misc_feature complement(1997215..1997934)
/gene="fliA"
/locus_tag="SF1965"
/note="Similar to Escherichia coli K12 flagellar
biosynthesis; alternative sigma factor 28; regulation of
flagellar operons gi: 1788231 (240 aa). BLAST with
identity of 98% in 239 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(1998099..1999751)
/gene="fliC"
/locus_tag="SF1966"
/db_xref="GeneID:1025169"
CDS complement(1998099..1999751)
/gene="fliC"
/locus_tag="SF1966"
/note="Code: N; COG: COG1344"
/codon_start=1
/transl_table=11
/product="flagellin"
/protein_id="NP_707809.1"
/db_xref="GeneID:1025169"
/translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD
AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTG
TNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
KKIDSDTLGLNGFNVNGGGAVANTAASKADLVAANATVVGNKYTVSAGYDAAKASDLL
AGVSDGDTVQATINNGFGTAASATNYKYDSASKSYSFDTTTASAADVQKYLTPGVGDT
AKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTGRLTKNGSGASLTEASLSTLAAN
NTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQAAFDKAVSTSGNNVDFTTAGY
SVNGTTGAVTKGVDSVYVDNNEALTTSDTVDFYLQDDGSVTNGSGKAVYKDADGKLTT
DAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRI
QDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG"
misc_feature complement(1998102..1999751)
/gene="fliC"
/locus_tag="SF1966"
/note="FliC/FljB family flagellin; Region: PRK08026"
/db_xref="CDD:236140"
gene 2000017..2001423
/gene="fliD"
/locus_tag="SF1967"
/db_xref="GeneID:1025193"
CDS 2000017..2001423
/gene="fliD"
/locus_tag="SF1967"
/note="Code: N; COG: COG1345"
/codon_start=1
/transl_table=11
/product="flagellar capping protein"
/protein_id="NP_707810.1"
/db_xref="GeneID:1025193"
/translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL
SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL
AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGDDKDPITIDISAANSSLSGIRDAINNA
KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV
SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKVQTAIK
DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS
SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS
NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL
NSTSSYLTQQFENNSNSK"
misc_feature 2000017..2001402
/gene="fliD"
/locus_tag="SF1967"
/note="flagellar capping protein; Reviewed; Region: fliD;
PRK08032"
/db_xref="CDD:236141"
gene 2001448..2001858
/gene="fliS"
/locus_tag="SF1968"
/db_xref="GeneID:1025185"
CDS 2001448..2001858
/gene="fliS"
/locus_tag="SF1968"
/note="Code: N; COG: COG1516"
/codon_start=1
/transl_table=11
/product="flagellar protein FliS"
/protein_id="NP_707811.1"
/db_xref="GeneID:1025185"
/translation="MYAAKGTQAYAQIGVESTVMSASQQQLVTMLFDGVLSALVRARL
FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR
NDVSAVEEVEALMRNIADAWKESLLSPSSIQDPV"
misc_feature 2001448..2001834
/gene="fliS"
/locus_tag="SF1968"
/note="flagellar export chaperone FliS; Region: FliS;
cl00654"
/db_xref="CDD:469861"
misc_feature order(2001520..2001522,2001529..2001531,2001535..2001540,
2001547..2001549,2001625..2001627,2001634..2001639,
2001649..2001654,2001661..2001666,2001688..2001690,
2001697..2001699,2001706..2001714,2001718..2001720,
2001775..2001780,2001784..2001789,2001796..2001801,
2001808..2001813,2001817..2001819)
/gene="fliS"
/locus_tag="SF1968"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:294015"
misc_feature 2001520..2001582
/gene="fliS"
/locus_tag="SF1968"
/note="coiled coil [structural motif]; Region: coiled
coil"
/db_xref="CDD:294015"
misc_feature 2001598..2001666
/gene="fliS"
/locus_tag="SF1968"
/note="coiled coil [structural motif]; Region: coiled
coil"
/db_xref="CDD:294015"
misc_feature 2001688..2001738
/gene="fliS"
/locus_tag="SF1968"
/note="coiled coil [structural motif]; Region: coiled
coil"
/db_xref="CDD:294015"
misc_feature 2001763..2001819
/gene="fliS"
/locus_tag="SF1968"
/note="coiled coil [structural motif]; Region: coiled
coil"
/db_xref="CDD:294015"
gene 2001858..2002223
/gene="fliT"
/locus_tag="SF1969"
/db_xref="GeneID:1025204"
CDS 2001858..2002223
/gene="fliT"
/locus_tag="SF1969"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FliT"
/protein_id="NP_707812.1"
/db_xref="GeneID:1025204"
/translation="MNNAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAV
QEIAHLTEEVAPSTTMQEQLRPMLHLILDNESKVKQLLQIRMDELAKLVGQSSVQKSV
LSAYGDQGGFVLAPQDNLF"
misc_feature 2001858..2002220
/gene="fliT"
/locus_tag="SF1969"
/note="flagella biosynthesis regulatory protein FliT;
Region: PRK10548"
/db_xref="CDD:182538"
gene 2002301..2003788
/gene="amyA"
/locus_tag="SF1970"
/db_xref="GeneID:1025158"
CDS 2002301..2003788
/gene="amyA"
/locus_tag="SF1970"
/note="Code: G; COG: COG0366"
/codon_start=1
/transl_table=11
/product="cytoplasmic alpha-amylase"
/protein_id="NP_707813.1"
/db_xref="GeneID:1025158"
/translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA
YKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVV
VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCF
SGIDHIEHPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
WARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAECWSHEVDKLQT
YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ
PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII
EQLDELILARQRFAHGVQTLFFDHPNCIAFIRSGTDEYPGCVVVMSNGDDGEKTIHLG
ENYGNKTWRDFLGNRQESVVTDENGEATFFCNGGSVSVWVIEEVI"
misc_feature 2002301..2003770
/gene="amyA"
/locus_tag="SF1970"
/note="cytoplasmic alpha-amylase; Reviewed; Region:
PRK09441"
/db_xref="CDD:236518"
misc_feature order(2002334..2002336,2002508..2002510,2002613..2002615,
2002898..2002906,2002997..2002999,2003003..2003008,
2003012..2003017,2003093..2003095,2003099..2003104,
2003180..2003182,2003291..2003296)
/gene="amyA"
/locus_tag="SF1970"
/note="active site"
/db_xref="CDD:200457"
misc_feature order(2002610..2002612,2002892..2002894,2002910..2002912)
/gene="amyA"
/locus_tag="SF1970"
/note="Na/Ca binding site [ion binding]; other site"
/db_xref="CDD:200457"
misc_feature order(2003003..2003005,2003093..2003095,2003294..2003296)
/gene="amyA"
/locus_tag="SF1970"
/note="catalytic site [active]"
/db_xref="CDD:200457"
gene complement(2003822..2004235)
/gene="yedD"
/locus_tag="SF1971"
/db_xref="GeneID:1027622"
CDS complement(2003822..2004235)
/gene="yedD"
/locus_tag="SF1971"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_707814.2"
/db_xref="GeneID:1027622"
/translation="MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ
RALVSPEAIGSLIVTKEGDTLDCRQWQRGIAVPGKLTLMSDDLTNVTVKRELYEVERD
GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP"
misc_feature complement(2003825..2004235)
/gene="yedD"
/locus_tag="SF1971"
/note="lipoprotein; Provisional; Region: PRK10397"
/db_xref="CDD:182428"
gene 2004422..2005627
/gene="yedE"
/locus_tag="SF1972"
/db_xref="GeneID:1025147"
CDS 2004422..2005627
/gene="yedE"
/locus_tag="SF1972"
/note="Code: R; COG: COG2391"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707815.2"
/db_xref="GeneID:1025147"
/translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE
FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK
LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW
FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ
PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV
QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
TILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFAALMLIIGWEKRFFRRE
APQTAKEIA"
misc_feature 2004434..2005615
/gene="yedE"
/locus_tag="SF1972"
/note="putative inner membrane protein; Provisional;
Region: PRK11099"
/db_xref="CDD:236845"
gene 2005624..2005857
/gene="yedF"
/locus_tag="SF1973"
/db_xref="GeneID:1025168"
CDS 2005624..2005857
/gene="yedF"
/locus_tag="SF1973"
/note="Code: K; COG: COG0425"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707816.1"
/db_xref="GeneID:1025168"
/translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
QSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK"
misc_feature 2005624..2005854
/gene="yedF"
/locus_tag="SF1973"
/note="putative sulfurtransferase YedF; Region: PRK11018"
/db_xref="CDD:236822"
misc_feature order(2005651..2005656,2005663..2005665,2005672..2005683,
2005687..2005689)
/gene="yedF"
/locus_tag="SF1973"
/note="CPxP motif; other site"
/db_xref="CDD:239514"
gene 2005964..2006617
/gene="yedK"
/locus_tag="SF1974"
/pseudo
/db_xref="GeneID:1023627"
misc_feature 2005964..2006617
/gene="yedK"
/locus_tag="SF1974"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788240 (218 aa). BLAST with
identity of 94% in 218 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2006674..2007708)
/locus_tag="SF1975"
/pseudogene="unknown"
/db_xref="GeneID:1027621"
gene 2007950..2008565
/locus_tag="SF1976"
/pseudogene="unknown"
/db_xref="GeneID:1026533"
gene 2008893..2009975
/gene="nmpC"
/locus_tag="SF1977"
/db_xref="GeneID:1025206"
CDS 2008893..2009975
/gene="nmpC"
/locus_tag="SF1977"
/note="Code: M; COG: COG3203"
/codon_start=1
/transl_table=11
/product="porin"
/protein_id="NP_707819.1"
/db_xref="GeneID:1025206"
/translation="MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKH
YFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAF
AGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
DFFGLVDGLNFAAQYQGKNDRTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNDQ
VIYGNNSLNASGQNAEVWAAGLKYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEV
VAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLIEYIDVGATYYFNKNMSTFVDYKINL
IDKSDFTKASGVATDDIVAVGLVYQF"
misc_feature 2008938..2009972
/gene="nmpC"
/locus_tag="SF1977"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl21487"
/db_xref="CDD:473880"
misc_feature order(2008986..2008988,2008992..2008994,2009010..2009012,
2009016..2009024,2009085..2009099,2009115..2009117,
2009121..2009129,2009133..2009135,2009139..2009150,
2009184..2009189,2009193..2009207,2009235..2009243,
2009340..2009342,2009346..2009351,2009850..2009855,
2009862..2009864,2009958..2009960,2009964..2009966,
2009970..2009972)
/gene="nmpC"
/locus_tag="SF1977"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238208"
misc_feature order(2009007..2009009,2009070..2009072,2009187..2009189,
2009280..2009282,2009340..2009342)
/gene="nmpC"
/locus_tag="SF1977"
/note="eyelet of channel [active]"
/db_xref="CDD:238208"
gene complement(2010525..2011262)
/locus_tag="SF1978"
/db_xref="GeneID:1025216"
CDS complement(2010525..2011262)
/locus_tag="SF1978"
/note="Code: K; COG: COG2207"
/codon_start=1
/transl_table=11
/product="regulator"
/protein_id="NP_707820.1"
/db_xref="GeneID:1025216"
/translation="MLARDKSNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINW
ETHSLTVDNNQIILFPCGYEFYIVNYPEAGLYLAEMLYYPIDLIEKFQKFYAITDQIR
NTTGFCLPQNPELIYCWEQLKTSISRGFSTQIQEHLAMGVLLSLGAHHVNCLLLSDSK
QSLISRCYNLMLSEPRTKWTANKVARYLYISVSTLHRRLASEGISFQSILDDVRLNNA
LSCYTNDSKTHQRDCQGKWLQVSFSFY"
misc_feature complement(2010609..>2010803)
/locus_tag="SF1978"
/note="transcriptional regulator HilD; Provisional;
Region: PRK15185"
/db_xref="CDD:185107"
gene complement(2011272..2011823)
/gene="ybcL"
/locus_tag="SF1979"
/db_xref="GeneID:1025203"
CDS complement(2011272..2011823)
/gene="ybcL"
/locus_tag="SF1979"
/note="Code: R; COG: COG1881"
/codon_start=1
/transl_table=11
/product="kinase inhibitor"
/protein_id="NP_707821.1"
/db_xref="GeneID:1025203"
/translation="MKKLIVSSVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGF
GCEGGNTSPSLTWSGAPEGTKSFAVTVYDPDAPTGSGWWHWTVANIPATVTYLPTDAG
RRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTDKIPVDSNSSGA
LVGYMLNANKIATAEITPVYEIK"
misc_feature complement(2011275..2011823)
/gene="ybcL"
/locus_tag="SF1979"
/note="kinase inhibitor; Region: PRK09818"
/db_xref="CDD:182092"
misc_feature complement(order(2011407..2011409,2011413..2011415,
2011419..2011421,2011431..2011445,2011572..2011574,
2011578..2011580,2011602..2011607))
/gene="ybcL"
/locus_tag="SF1979"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176643"
gene complement(2011992..2012324)
/gene="emrE"
/locus_tag="SF1980"
/db_xref="GeneID:1025057"
CDS complement(2011992..2012324)
/gene="emrE"
/locus_tag="SF1980"
/note="Code: P; COG: COG2076"
/codon_start=1
/transl_table=11
/product="multidrug efflux protein"
/protein_id="NP_707822.1"
/db_xref="GeneID:1025057"
/translation="MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASF
WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN
LLSRSAPH"
misc_feature complement(2011995..2012324)
/gene="emrE"
/locus_tag="SF1980"
/note="EmrE family multidrug efflux SMR transporter;
Region: emrE; PRK09541"
/db_xref="CDD:137367"
misc_feature 2012521..2012749
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788246 (93 aa). BLAST with
identity of 94% in 76 aa. This CDS has been truncated. The
sequence has been checked and is believed to be correct."
gene complement(2012669..2012983)
/gene="fliE"
/locus_tag="SF1982"
/db_xref="GeneID:1025154"
CDS complement(2012669..2012983)
/gene="fliE"
/locus_tag="SF1982"
/note="Code: N; COG: COG1677"
/codon_start=1
/transl_table=11
/product="flagellar hook-basal body protein FliE"
/protein_id="NP_707823.2"
/db_xref="GeneID:1025154"
/translation="MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDR
ISDTQTVARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSM
QV"
misc_feature complement(2012675..2012980)
/gene="fliE"
/locus_tag="SF1982"
/note="flagellar hook-basal body complex protein FliE;
Region: fliE; TIGR00205"
/db_xref="CDD:272960"
gene 2013197..2014856
/gene="fliF"
/locus_tag="SF1983"
/pseudo
/db_xref="GeneID:1025211"
misc_feature 2013197..2014856
/gene="fliF"
/locus_tag="SF1983"
/note="Similar to Escherichia coli K12 flagellar
biosynthesis; basal-body MS(membrane and
supramembrane)-ring and collar protein gi: 1788248 (553
aa). BLAST with identity of 96% in 553 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct."
/pseudo
gene 2014849..2015844
/gene="fliG"
/locus_tag="SF1984"
/db_xref="GeneID:1025212"
CDS 2014849..2015844
/gene="fliG"
/locus_tag="SF1984"
/note="Code: N; COG: COG1536"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein G"
/protein_id="NP_707824.2"
/db_xref="GeneID:1025212"
/translation="MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANV
TQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRD
TASGIETLNFMEPQSAADLIRDEHPQIIATILVHLRRAQAADILALFDERLRHDVMLR
IATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLR
NMSQRAADILRDDLAKRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
misc_feature 2014849..2015841
/gene="fliG"
/locus_tag="SF1984"
/note="flagellar motor switch protein FliG; Region: fliG;
TIGR00207"
/db_xref="CDD:272961"
gene 2015837..2016523
/gene="fliH"
/locus_tag="SF1985"
/db_xref="GeneID:1025208"
CDS 2015837..2016523
/gene="fliH"
/locus_tag="SF1985"
/note="Code: N; COG: COG1317"
/codon_start=1
/transl_table=11
/product="flagellar assembly protein H"
/protein_id="NP_707825.2"
/db_xref="GeneID:1025208"
/translation="MSDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQL
AQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGLEQGLAEAKAQQAPIHARMQQLV
SEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQE
LCRLAAPGVV"
misc_feature 2015837..2016517
/gene="fliH"
/locus_tag="SF1985"
/note="flagellar assembly protein FliH; Region: fliH;
PRK05687"
/db_xref="CDD:235562"
gene 2016523..2017896
/gene="fliI"
/locus_tag="SF1986"
/db_xref="GeneID:1025217"
CDS 2016523..2017896
/gene="fliI"
/locus_tag="SF1986"
/note="Code: N; COG: COG1157"
/codon_start=1
/transl_table=11
/product="flagellum-specific ATP synthase"
/protein_id="NP_707826.1"
/db_xref="GeneID:1025217"
/translation="MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGL
QLPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAE
GLQSGKQLPLGPALLGRVLDGSGKPLDGLPFPDTTETGALITPPFNPLQRTPIEHVLD
TGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKD
FIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTR
YAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDD
QQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFK
QLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLE
RIFPTVS"
misc_feature 2016523..2017887
/gene="fliI"
/locus_tag="SF1986"
/note="flagellum-specific ATP synthase FliI; Region: fliI;
PRK07960"
/db_xref="CDD:181182"
gene 2017915..2018259
/gene="fliJ"
/locus_tag="SF1987"
/db_xref="GeneID:1025160"
CDS 2017915..2018259
/gene="fliJ"
/locus_tag="SF1987"
/note="Code: N; COG: COG2882"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis chaperone FliJ"
/protein_id="NP_707827.1"
/db_xref="GeneID:1025160"
/translation="MAEEQLKMLIDYQNEYRNNLNSDMSAGMTSNRWINYQQFIQTLE
KAITQHRQQLNQWTQKVDIALNSWREKKQRLQAWQTLQERQSTAALLAENRLDQKKMD
EFAQRAAMRKPE"
misc_feature <2017918..2018256
/gene="fliJ"
/locus_tag="SF1987"
/note="Flagellar FliJ protein; Region: FliJ; cl23733"
/db_xref="CDD:451514"
gene 2018256..2019383
/gene="fliK"
/locus_tag="SF1988"
/db_xref="GeneID:1025170"
CDS 2018256..2019383
/gene="fliK"
/locus_tag="SF1988"
/note="Code: N; COG: COG3144"
/codon_start=1
/transl_table=11
/product="flagellar hook-length control protein"
/protein_id="NP_707828.1"
/db_xref="GeneID:1025170"
/translation="MIRLAPLITADVDTTTLPGGKASDAAQDFLTLLSEALAGETTTD
KAAPQLLVATDKPTTKGEPLVSDILADAQQADLLIPVDETLPVINDEQSTSTPLTTAQ
TMTLAAVADKNTTKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPAEKP
TLFTKLTSAQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTADASPLITPH
QTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLK
VDDNQAQIQMISPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQ
QQQSQRTANHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA"
misc_feature 2018256..2019380
/gene="fliK"
/locus_tag="SF1988"
/note="flagellar hook length control protein FliK; Region:
PRK10118"
/db_xref="CDD:236652"
gene 2019488..2019952
/gene="fliL"
/locus_tag="SF1989"
/db_xref="GeneID:1025197"
CDS 2019488..2019952
/gene="fliL"
/locus_tag="SF1989"
/note="Code: N; COG: COG1580"
/codon_start=1
/transl_table=11
/product="flagellar basal body protein FliL"
/protein_id="NP_707829.1"
/db_xref="GeneID:1025197"
/translation="MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADD
KAQQRVVPSPVFYALDTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLL
LLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR"
misc_feature 2019488..2019949
/gene="fliL"
/locus_tag="SF1989"
/note="flagellar basal body-associated protein FliL;
Reviewed; Region: fliL; PRK07021"
/db_xref="CDD:235909"
gene 2019957..2020961
/gene="fliM"
/locus_tag="SF1990"
/db_xref="GeneID:1025187"
CDS 2019957..2020961
/gene="fliM"
/locus_tag="SF1990"
/note="Code: N; COG: COG1868"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein FliM"
/protein_id="NP_707830.2"
/db_xref="GeneID:1025187"
/translation="MGDSILSQAEIDALLNGDSEVKDEPTASISGESDIRPYDPNTQR
RVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
ALEGYSDAWKAINPLEVEYVRSEMQVEFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQIL
KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
"
misc_feature 2019957..2020958
/gene="fliM"
/locus_tag="SF1990"
/note="flagellar motor switch protein FliM; Validated;
Region: fliM; PRK06666"
/db_xref="CDD:235849"
gene 2020958..2021371
/gene="fliN"
/locus_tag="SF1991"
/db_xref="GeneID:1027610"
CDS 2020958..2021371
/gene="fliN"
/locus_tag="SF1991"
/note="Code: N; COG: COG1886"
/codon_start=1
/transl_table=11
/product="flagellar motor switch protein FliN"
/protein_id="NP_707831.1"
/db_xref="GeneID:1027610"
/translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSEKSAADAVFQQFGG
GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR"
misc_feature 2020958..2021368
/gene="fliN"
/locus_tag="SF1991"
/note="flagellar motor switch protein FliN; Validated;
Region: fliN; PRK07963"
/db_xref="CDD:181183"
gene 2021434..2021739
/gene="fliO"
/locus_tag="SF1992"
/db_xref="GeneID:1025215"
CDS 2021434..2021739
/gene="fliO"
/locus_tag="SF1992"
/codon_start=1
/transl_table=11
/product="flagellar protein FliO"
/protein_id="NP_707832.3"
/db_xref="GeneID:1025215"
/translation="MSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGA
RERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRGGRS"
misc_feature <2021482..2021736
/gene="fliO"
/locus_tag="SF1992"
/note="Flagellar biosynthesis protein, FliO; Region: FliO;
cl01247"
/db_xref="CDD:445331"
gene 2021862..2022476
/gene="fliP"
/locus_tag="SF1993"
/db_xref="GeneID:1025190"
CDS 2021862..2022476
/gene="fliP"
/locus_tag="SF1993"
/note="Code: N; COG: COG1338"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FliP"
/protein_id="NP_707833.3"
/db_xref="GeneID:1025190"
/translation="MQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPP
NQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTR
EADLGLFARLANTGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIA
SVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS"
misc_feature 2021862..2022470
/gene="fliP"
/locus_tag="SF1993"
/note="Flagellar biosynthesis protein FliP [Cell
motility]; Region: FliP; COG1338"
/db_xref="CDD:440949"
gene 2022486..2022755
/gene="fliQ"
/locus_tag="SF1994"
/db_xref="GeneID:1025209"
CDS 2022486..2022755
/gene="fliQ"
/locus_tag="SF1994"
/note="Code: N; COG: COG1987"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FliQ"
/protein_id="NP_707834.1"
/db_xref="GeneID:1025209"
/translation="MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQI
NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG"
misc_feature 2022486..2022752
/gene="fliQ"
/locus_tag="SF1994"
/note="flagellar type III secretion system protein FliQ;
Region: fliQ; PRK05700"
/db_xref="CDD:235567"
gene 2022764..2023549
/gene="fliR"
/locus_tag="SF1995"
/db_xref="GeneID:1025189"
CDS 2022764..2023549
/gene="fliR"
/locus_tag="SF1995"
/note="Code: N; COG: COG1684"
/codon_start=1
/transl_table=11
/product="flagellar biosynthesis protein FliR"
/protein_id="NP_707835.2"
/db_xref="GeneID:1025189"
/translation="MMQETSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKL
GLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII
GLQMGLSFATFVDPGSHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG
SEPLNSNAFLAPTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGF
PLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI"
misc_feature 2022788..2023513
/gene="fliR"
/locus_tag="SF1995"
/note="flagellar type III secretion system protein FliR;
Region: fliR; PRK05701"
/db_xref="CDD:235568"
gene 2023834..2024457
/gene="rcsA"
/locus_tag="SF1996"
/db_xref="GeneID:1026912"
CDS 2023834..2024457
/gene="rcsA"
/locus_tag="SF1996"
/note="Code: K; COG: COG2771"
/codon_start=1
/transl_table=11
/product="colanic acid capsular biosynthesis activation
protein A"
/protein_id="NP_707836.1"
/db_xref="GeneID:1026912"
/translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD
SQRPSVVFINEDCFIHDASNSQRIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL
ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD
QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR"
misc_feature 2023834..2024454
/gene="rcsA"
/locus_tag="SF1996"
/note="transcriptional regulator RcsA; Region: rcsA;
PRK15411"
/db_xref="CDD:185309"
gene complement(2024501..2024689)
/gene="dsrB"
/locus_tag="SF1997"
/db_xref="GeneID:1025210"
CDS complement(2024501..2024689)
/gene="dsrB"
/locus_tag="SF1997"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707837.2"
/db_xref="GeneID:1025210"
/translation="MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVALEDYPLGI
WFFNEAGHQDGIFVEKAE"
misc_feature complement(2024504..2024689)
/gene="dsrB"
/locus_tag="SF1997"
/note="protein DsrB; Region: PRK10708"
/db_xref="CDD:182664"
gene 2024852..2025079
/locus_tag="SF1998"
/db_xref="GeneID:1025186"
CDS 2024852..2025079
/locus_tag="SF1998"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707838.2"
/db_xref="GeneID:1025186"
/translation="MKTAKVYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHV
SVDGREYHTWRELADAFELDIHDFSVSEVNR"
misc_feature 2024903..2025076
/locus_tag="SF1998"
/note="Protein of unknown function (DUF2525); Region:
DUF2525; pfam10733"
/db_xref="CDD:431461"
gene complement(2025093..2025179)
/gene="dsrA"
/locus_tag="SF4555"
/db_xref="GeneID:1025196"
ncRNA complement(2025093..2025179)
/ncRNA_class="antisense_RNA"
/gene="dsrA"
/locus_tag="SF4555"
/product="anti-sense RNA silencer of rcsA gene"
/db_xref="GeneID:1025196"
gene 2025377..2026192
/locus_tag="SF1999"
/pseudo
/db_xref="GeneID:1023389"
misc_feature 2025377..2026192
/locus_tag="SF1999"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788265 (272 aa). BLAST with
identity of 96% in 272 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2026189..2027673)
/gene="yedQ"
/locus_tag="SF2000"
/db_xref="GeneID:1025207"
CDS complement(2026189..2027673)
/gene="yedQ"
/locus_tag="SF2000"
/codon_start=1
/transl_table=11
/product="diguanylate cyclase YedQ"
/protein_id="NP_707839.1"
/db_xref="GeneID:1025207"
/translation="MQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAW
QIELNRRRTLPVNGVSDALVSEGNFLSRENESLDNEITAALEVGYLLRLAHNSSSMVE
QAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEH
ASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRF
LTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLARVHT
LSEGVRGDFGSISIALTLLWALFTTMLLLSWYVIRRMVSNMYVLQSSLQWQAWHDTLT
RLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGL
ISSSLRAQDVAGRVGGEEFCVILPGANLTQAAEVAERIRLKLNEKEMLIAKSTTIRIS
ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA"
misc_feature complement(2026192..2027673)
/gene="yedQ"
/locus_tag="SF2000"
/note="cellulose biosynthesis regulator YedQ; Region:
PRK15426"
/db_xref="CDD:237964"
gene complement(2028054..2028236)
/locus_tag="SF2001"
/db_xref="GeneID:1025201"
CDS complement(2028054..2028236)
/locus_tag="SF2001"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707840.1"
/db_xref="GeneID:1025201"
/translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
ETDLVPGEGSRSAEEV"
misc_feature complement(2028084..2028236)
/locus_tag="SF2001"
/note="Uncharacterized conserved protein YodC, DUF2158
family [Function unknown]; Region: YodC; COG5475"
/db_xref="CDD:444226"
gene complement(2028315..2029232)
/gene="yedI"
/locus_tag="SF2002"
/db_xref="GeneID:1025255"
CDS complement(2028315..2029232)
/gene="yedI"
/locus_tag="SF2002"
/note="Code: S; COG: COG2354"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707841.1"
/db_xref="GeneID:1025255"
/translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVA
ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHIAGQQSAVVAMILPT
VLNLILGFIIGGIVVLGVKAVAKMRGQAH"
misc_feature complement(2028318..2029226)
/gene="yedI"
/locus_tag="SF2002"
/note="hypothetical protein; Provisional; Region:
PRK10062"
/db_xref="CDD:182217"
gene 2029405..2030325
/gene="yedA"
/locus_tag="SF2003"
/db_xref="GeneID:1025254"
CDS 2029405..2030325
/gene="yedA"
/locus_tag="SF2003"
/note="Code: GER; COG: COG0697"
/codon_start=1
/transl_table=11
/product="DMT superfamily transporter inner membrane
protein"
/protein_id="NP_707842.1"
/db_xref="GeneID:1025254"
/translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVGSWPPLMMAGVRF
QAAGILLLAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
IATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
misc_feature 2029405..2030280
/gene="yedA"
/locus_tag="SF2003"
/note="putative DMT superfamily transporter inner membrane
protein; Provisional; Region: PRK11272"
/db_xref="CDD:183067"
gene complement(2030314..2030784)
/gene="vsr"
/locus_tag="SF2004"
/db_xref="GeneID:1026736"
CDS complement(2030314..2030784)
/gene="vsr"
/locus_tag="SF2004"
/codon_start=1
/transl_table=11
/product="DNA mismatch endonuclease"
/protein_id="NP_707843.1"
/db_xref="GeneID:1026736"
/translation="MVDVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
SLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
RLQELGWRVLIVWECALRRREKLTDAALTERLEEWICGEGASAQIDTQGIHLLA"
misc_feature complement(2030362..2030778)
/gene="vsr"
/locus_tag="SF2004"
/note="G:T-mismatch repair DNA endonuclease Vsr, very
short patch repair protein [Replication, recombination and
repair]; Region: Vsr; COG3727"
/db_xref="CDD:442941"
gene complement(2030765..2032183)
/gene="dcm"
/locus_tag="SF2005"
/db_xref="GeneID:1025261"
CDS complement(2030765..2032183)
/gene="dcm"
/locus_tag="SF2005"
/note="Code: L; COG: COG0270"
/codon_start=1
/transl_table=11
/product="DNA cytosine methylase"
/protein_id="NP_707844.1"
/db_xref="GeneID:1025261"
/translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKMLVAQLNGVGENH
WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRG
FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEH
IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
AMFVLENVKNLKSHDKGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMATGEKDFDDP
LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
EPKIKQAVALRQQEAQHGRRSR"
misc_feature complement(2030789..2032183)
/gene="dcm"
/locus_tag="SF2005"
/note="DNA cytosine methylase; Provisional; Region:
PRK10458"
/db_xref="CDD:236696"
gene complement(2032250..2032790)
/gene="yedJ"
/locus_tag="SF2006"
/pseudo
/db_xref="GeneID:1025250"
misc_feature complement(2032250..2032790)
/gene="yedJ"
/locus_tag="SF2006"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788273 (232 aa). BLAST with
identity of 96% in 180 aa. This CDS contains deletion. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(2033088..2033900)
/locus_tag="SF2007"
/db_xref="GeneID:1025195"
CDS complement(2033088..2033900)
/locus_tag="SF2007"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707845.1"
/db_xref="GeneID:1025195"
/translation="MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGY
RKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNP
DAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWW
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRER
IKKKIYGTREEARSDIFDYIEMFYNSKRRHGSSEQMSPTEYENQYYQRLGSV"
misc_feature complement(2033121..>2033897)
/locus_tag="SF2007"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2033957..2034241)
/locus_tag="SF2008"
/db_xref="GeneID:1026536"
CDS complement(2033957..2034241)
/locus_tag="SF2008"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707846.1"
/db_xref="GeneID:1026536"
/translation="MPMSGKRYPEEFKTEAVKQVVDRGYSVASVATRLDITTHSLYAW
IKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKAAAYFAKLSD"
misc_feature complement(2033975..2034241)
/locus_tag="SF2008"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2034262..2035110
/locus_tag="SF2009"
/db_xref="GeneID:1025236"
CDS 2034262..2035110
/locus_tag="SF2009"
/note="Code: M; COG: COG3203"
/codon_start=1
/transl_table=11
/product="outer membrane pore protein"
/protein_id="NP_707847.1"
/db_xref="GeneID:1025236"
/translation="MTLRCLLNPWRFSERILTDRENGEKGDNSQDTSYARVGVKGETQ
INPEMTGYGQFELDLEASNRHNPDQTRLAYAGLSYKDFGSFDYSRNVGVAYDAEAFTD
MFVEWGGDSWAGTDLFMTNRTNGVATYRNTDFFGMVEGLNFALQYQGKNEGTGNYKAN
GDGHGLSATYTIDGFSFAGAYANSDRTDWQSGDGKGERAEVWALSTKYDANNVYAAVM
YGESHNMNSDDGDVVNKTQNFEAVLQYQFDFGLRPSIGYSYSKALDVAGQFLDLPLYF
QTSVIT"
misc_feature 2034352..2035062
/locus_tag="SF2009"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl21487"
/db_xref="CDD:473880"
misc_feature order(2034367..2034369,2034472..2034474,2034565..2034567,
2034625..2034627)
/locus_tag="SF2009"
/note="eyelet of channel [active]"
/db_xref="CDD:238208"
mobile_element complement(2035070..2036400)
/mobile_element_type="insertion sequence:IS2"
gene complement(2035081..2035986)
/locus_tag="SF2010"
/db_xref="GeneID:1025248"
CDS complement(2035081..2035986)
/locus_tag="SF2010"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_707848.1"
/db_xref="GeneID:1025248"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(2035084..2035986)
/locus_tag="SF2010"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(2035944..2036354)
/locus_tag="SF2011"
/db_xref="GeneID:1026913"
CDS complement(2035944..2036354)
/locus_tag="SF2011"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_707849.3"
/db_xref="GeneID:1026913"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(2035947..2036309)
/locus_tag="SF2011"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
mobile_element 2037155..2037922
/mobile_element_type="insertion sequence:IS1"
gene 2037210..2037485
/gene="insA"
/locus_tag="SF2012"
/db_xref="GeneID:1025252"
CDS 2037210..2037485
/gene="insA"
/locus_tag="SF2012"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707850.1"
/db_xref="GeneID:1025252"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2037231..>2037482
/gene="insA"
/locus_tag="SF2012"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2037512..2037907
/gene="insB"
/locus_tag="SF2013"
/db_xref="GeneID:1025246"
CDS 2037512..2037907
/gene="insB"
/locus_tag="SF2013"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707851.1"
/db_xref="GeneID:1025246"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 2037515..2037904
/gene="insB"
/locus_tag="SF2013"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 2037953..2038804
/gene="yedU"
/locus_tag="SF2014"
/db_xref="GeneID:1025257"
CDS 2037953..2038804
/gene="yedU"
/locus_tag="SF2014"
/note="Code: R; COG: COG0693"
/codon_start=1
/transl_table=11
/product="chaperone protein HchA"
/protein_id="NP_707852.1"
/db_xref="GeneID:1025257"
/translation="MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKP
YRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMT
KFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIG
LPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHSDNPLNGYSICAFPDAADKQTP
DIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKRLTGDSPFAANALGKLAAQE
MLAAYAS"
misc_feature 2037953..2038801
/gene="yedU"
/locus_tag="SF2014"
/note="protein deglycase HchA; Region: PRK04155"
/db_xref="CDD:235228"
misc_feature 2038505..2038507
/gene="yedU"
/locus_tag="SF2014"
/note="conserved cys residue [active]"
/db_xref="CDD:153222"
gene complement(2038912..2040270)
/gene="yedV"
/locus_tag="SF2015"
/db_xref="GeneID:1025222"
CDS complement(2038912..2040270)
/gene="yedV"
/locus_tag="SF2015"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="2-component sensor protein"
/protein_id="NP_707853.1"
/db_xref="GeneID:1025222"
/translation="MKRLSITVRLTLLFIFLQSVAGAGIVWTLYNGLASELKWRDDTT
LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHSDGINKIVNRTNVSDDMLN
NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
SIIICIVAIILCSVLSPLLIRTGLREIKKLSGVTEALNYNDSRVPVEVNALPRELKPL
GQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQIRSIAEYQKTIA
GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF
KVKCNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDANGSLNIDIASPGTK
INEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLSKHNVFRITLPQ
RN"
misc_feature complement(2038924..2040264)
/gene="yedV"
/locus_tag="SF2015"
/note="heavy metal sensor kinase; Region: cztS_silS_copS;
TIGR01386"
/db_xref="CDD:273593"
gene complement(2040270..2040941)
/gene="yedW"
/locus_tag="SF2016"
/db_xref="GeneID:1027615"
CDS complement(2040270..2040941)
/gene="yedW"
/locus_tag="SF2016"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="transcriptional regulatory protein YedW"
/protein_id="NP_707854.2"
/db_xref="GeneID:1027615"
/translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD
YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF
SFSELLARVRAQLRQHHALNSTLEISGLKMDSVSQSVSRDNISITLTRKEFQLLWLLA
SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF
VAVKK"
misc_feature complement(2040273..2040941)
/gene="yedW"
/locus_tag="SF2016"
/note="DNA-binding response regulator HprR; Region:
PRK11517"
/db_xref="CDD:183172"
gene 2041074..2041487
/locus_tag="SF2017"
/db_xref="GeneID:1025247"
CDS 2041074..2041487
/locus_tag="SF2017"
/note="Code: R; COG: COG2351"
/codon_start=1
/transl_table=11
/product="5-hydroxyisourate hydrolase"
/protein_id="NP_707855.1"
/db_xref="GeneID:1025247"
/translation="MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQTGKPAAD
VTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLES
FFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS"
misc_feature 2041074..2041484
/locus_tag="SF2017"
/note="hydroxyisourate hydrolase; Provisional; Region:
PRK15036"
/db_xref="CDD:184996"
misc_feature order(2041167..2041169,2041173..2041175,2041281..2041283,
2041434..2041436,2041440..2041442,2041446..2041448,
2041473..2041475)
/locus_tag="SF2017"
/note="active site"
/db_xref="CDD:100114"
misc_feature order(2041179..2041190,2041380..2041385,2041389..2041391,
2041401..2041409,2041452..2041454,2041458..2041478)
/locus_tag="SF2017"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:100114"
gene 2041596..2042600
/locus_tag="SF2018"
/pseudo
/db_xref="GeneID:1025256"
misc_feature 2041596..2042600
/locus_tag="SF2018"
/note="Similar to Escherichia coli K12 reductase gi:
1788282 (335 aa). BLAST with identity of 97% in 335 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 2042601..2043236
/locus_tag="SF2019"
/db_xref="GeneID:1025249"
CDS 2042601..2043236
/locus_tag="SF2019"
/note="Code: S; COG: COG2717"
/codon_start=1
/transl_table=11
/product="sulfite oxidase subunit YedZ"
/protein_id="NP_707856.1"
/db_xref="GeneID:1025249"
/translation="MRLTAKQVIWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
HFTGRTALKFLLAALLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
NNLALLGKELITRPYLTLGIISWVILLALAFTSTQSMQRKLGKHWQQLHNFVYLVAIL
APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLLSLFNRLRKQAHNKLSL"
misc_feature 2042601..2043218
/locus_tag="SF2019"
/note="protein-methionine-sulfoxide reductase heme-binding
subunit MsrQ; Region: PRK05419"
/db_xref="CDD:235452"
gene 2043494..2044144
/locus_tag="SF2020"
/db_xref="GeneID:1025251"
CDS 2043494..2044144
/locus_tag="SF2020"
/note="Code: R; COG: COG3443"
/codon_start=1
/transl_table=11
/product="zinc/cadmium-binding protein"
/protein_id="NP_707857.1"
/db_xref="GeneID:1025251"
/translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV
FDDTNVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYRKGYP
TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
misc_feature 2043494..2044141
/locus_tag="SF2020"
/note="zinc/cadmium-binding protein; Provisional; Region:
PRK10306"
/db_xref="CDD:182368"
gene complement(2045222..2045491)
/locus_tag="SF2020a"
/db_xref="GeneID:16608337"
CDS complement(2045222..2045491)
/locus_tag="SF2020a"
/codon_start=1
/transl_table=11
/product="tail fiber assembly protein"
/protein_id="YP_008439260.1"
/db_xref="GeneID:16608337"
/translation="MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQGFSEHIAPLQD
AVDLEIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPEEPDTM"
misc_feature complement(2045231..>2045398)
/locus_tag="SF2020a"
/note="Caudovirales tail fibre assembly protein, lambda
gpK; Region: Caudo_TAP; cl17077"
/db_xref="CDD:450149"
gene 2045548..2046216
/locus_tag="SF2021"
/db_xref="GeneID:1025219"
CDS 2045548..2046216
/locus_tag="SF2021"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707858.1"
/db_xref="GeneID:1025219"
/translation="MVKLMKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEH
LLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHK
ISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATI
LGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSA
SGKK"
misc_feature 2045719..2046012
/locus_tag="SF2021"
/note="Methyltransferase domain; Region: Methyltransf_12;
pfam08242"
/db_xref="CDD:400515"
misc_feature 2046253..2069131
/note="ipaH island IV"
gene 2046532..2049513
/gene="ipaH_5"
/locus_tag="SF2022"
/pseudo
/db_xref="GeneID:1027614"
misc_feature 2046532..2049513
/gene="ipaH_5"
/locus_tag="SF2022"
/note="Similar to Shigella flexneri IpaH9.8 gb: AAC23714.1
(545 aa). BLAST with identity of 77% in 994 aa. This CDS
has been disrupted by insertion. The sequence has been
checked and is believed to be correct."
/pseudo
mobile_element 2047145..2048473
/mobile_element_type="insertion sequence:iso-IS10R"
gene 2047252..2048460
/locus_tag="SF2023"
/db_xref="GeneID:1027506"
CDS 2047252..2048460
/locus_tag="SF2023"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_707859.1"
/db_xref="GeneID:1027506"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature 2047366..2048421
/locus_tag="SF2023"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene complement(2049693..2050307)
/locus_tag="SF2024"
/db_xref="GeneID:1027609"
CDS complement(2049693..2050307)
/locus_tag="SF2024"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707860.2"
/db_xref="GeneID:1027609"
/translation="MRFSTIVSVVTLVWGISPRQPSGKNIIRWLLKKRTNGSVRYCQY
TSVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRTE
QEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPEL
EELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDLASIRAFDVE"
misc_feature complement(2049708..2050031)
/locus_tag="SF2024"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
mobile_element complement(2050170..2051072)
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene complement(2050213..2051031)
/locus_tag="SF2025"
/db_xref="GeneID:1025221"
CDS complement(2050213..2051031)
/locus_tag="SF2025"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707861.2"
/db_xref="GeneID:1025221"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDKRLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQLPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLGHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(2050240..>2051031)
/locus_tag="SF2025"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
mobile_element 2051073..2051840
/mobile_element_type="insertion sequence:IS1"
gene 2051322..2051825
/gene="insB"
/locus_tag="SF2026"
/db_xref="GeneID:1027613"
CDS 2051322..2051825
/gene="insB"
/locus_tag="SF2026"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707862.1"
/db_xref="GeneID:1027613"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 2051430..2051822
/gene="insB"
/locus_tag="SF2026"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2051918..2052400)
/locus_tag="SF2027"
/db_xref="GeneID:1023840"
CDS complement(2051918..2052400)
/locus_tag="SF2027"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707863.1"
/db_xref="GeneID:1023840"
/translation="MIKPFLMTVAILTSCCAQAKILTNEEIVSRFISNVKTSADNDVD
LDTDGFRQLRISCPSPSASGAIILRKASYEFGKSIGVFDFANNASPATMTFLIPIYKD
DDFDSDTVGFTFAFKMPRGQFFVDVKENGNIRAGVNVNGESGVTYENCKLNMKDINDD
"
gene complement(2052468..2054417)
/locus_tag="SF2028"
/db_xref="GeneID:1025268"
CDS complement(2052468..2054417)
/locus_tag="SF2028"
/codon_start=1
/transl_table=11
/product="tail protein"
/protein_id="NP_707864.1"
/db_xref="GeneID:1025268"
/translation="MADSFQLKAIITAVDKVSAPLKGMQRQLKGFKKEFASLSLGAAG
AGTAVLGALALPVKSAIALESKMADVRKVVDGLDTPEAFKAMTEQVRDLSTELPMSAE
GIAEIVAAGGQAGIARDELMQFTDDAVKMGVAFDTTAEESGQMMAQWRTAFKLTQGEV
AGLADKINYLGNTGPASAKKISDVVTRIGPLGSVAGVASGEIAAMGATIAGMGVESEI
AATGIKNFMLSLTARDSATKSQKKVLRSLRISPKKLAADMQKDARGAMLHVLDSLAKV
PKEKQAAVLKALFGKESLGAIAPLLTNLDLLRTNFNRVADAQQYGGSMQKEYAARAAT
TENQLLLLQNQINAISSTLGETFLPSLNEGIKEMKPFLEEVRTFVRENPEVVKTIAKT
GAALLTMGVAIGTLTRITKIMGSVMNMTPAKGLIALLVGGAYLIIDNWETVGPVVKKV
WQEVDQVVRAMGGWEQAVKTIATVSALYIGVKAVASIRAATVAQNQWTTAAGKTGLKL
KGLGKISLIGGLLELGMMAQEFEKEHPWLVKNFVADALNSGFGLNDKFDEWGKQFHDF
VYDMTGWQMPRGDGYLSPDKRYTPNVSLERNQLLSLASSPATRSELKVTFDNAPPGMR
VIDLPKTGDPFMKITHDVGYSPFKR"
misc_feature complement(2052594..2054345)
/locus_tag="SF2028"
/note="Phage-related tail protein [Mobilome: prophages,
transposons]; Region: COG5283"
/db_xref="CDD:444094"
gene complement(2054502..2054837)
/locus_tag="SF2029"
/db_xref="GeneID:1025734"
CDS complement(2054502..2054837)
/locus_tag="SF2029"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707865.1"
/db_xref="GeneID:1025734"
/translation="MAMNVTEIVLKKPVTAHNEMLHVLELREPTYDEIEALGFPFIIS
GEGSIKLDSQVALKYIPLLAGIPCSSAAQMAKLDIFKTSMQILRFFTQSETGSTSGND
STMLPGSGN"
misc_feature complement(2054568..2054816)
/locus_tag="SF2029"
/note="Phage tail assembly chaperone proteins, E, or 41 or
14; Region: Phage_TAC_7; pfam10109"
/db_xref="CDD:431061"
gene complement(2054837..2055193)
/locus_tag="SF2030"
/db_xref="GeneID:1025264"
CDS complement(2054837..2055193)
/locus_tag="SF2030"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707866.1"
/db_xref="GeneID:1025264"
/translation="MAKIAGTCFFKVDGQQLSLTGGIEVPMNTNVRDDIVGMAGDVDY
KETWRSPYVKGTFKVPKNFPVDKITTSDQMTITAELANGMVYVLSAAWLHGEANHNAE
EGTADLEFHGEEGGYQ"
misc_feature complement(2054849..2055193)
/locus_tag="SF2030"
/note="Phage tail tube protein; Region: Tail_tube;
pfam10618"
/db_xref="CDD:431398"
gene complement(2055193..2056689)
/locus_tag="SF2031"
/db_xref="GeneID:1025265"
CDS complement(2055193..2056689)
/locus_tag="SF2031"
/codon_start=1
/transl_table=11
/product="sheath protein"
/protein_id="NP_707867.1"
/db_xref="GeneID:1025265"
/translation="MTISFNTVPSNTLVPLFYAEMNNSAANTAVTSAPALLIGHASND
AAIEVNSLVLMPSADYARQICGAGSQLARMVEVYRQTDPFGELYVIAVPEARGAAATV
RVTVAGEAEESGTLSLYVGRSRVQVPVVNGDDATAVATAIKEAVNGVITLPFTASSDA
GVVTLTARHKGLYGNELPVCLNYYGSGGGEILPAGLRVVTEVGAAGSGAPDLTAAVAA
MGDEAFDFIGLPFNDAASINMMMTEMNDSSGRWSYARQLYGHVYTAKLGTLSELVGAG
DMHNQQHITLAGYEKETQSPVDELVASRLAREAVFIRNDPARPTQTGELVGMLPAPKG
KRFIMTEQQTLLSHGVATAYVEGGTLQIQRSVTTYKKNAYGVADNSYLDSETLHTSAY
VLRKLKSVITSKYGRHKLANDGTRFGPGQAIVTPAVIKGELLATYRQMERAGIVENYD
LFKQYLIVERDADNPNRLNTLFPPDYVNQLRVFAVVNQFRLQYSEESA"
misc_feature complement(2055217..2056689)
/locus_tag="SF2031"
/note="Mu-like prophage tail sheath protein gpL [Mobilome:
prophages, transposons]; Region: gpL; COG4386"
/db_xref="CDD:443512"
mobile_element complement(2057198..2058461)
/mobile_element_type="insertion sequence:IS600"
gene complement(2057241..2058059)
/locus_tag="SF2033"
/db_xref="GeneID:1027616"
CDS complement(2057241..2058059)
/locus_tag="SF2033"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707869.1"
/db_xref="GeneID:1027616"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLACLRKELRLRCKQKRKFRAPTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(2057268..>2058059)
/locus_tag="SF2033"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2058095..2058397)
/locus_tag="SF2034"
/db_xref="GeneID:1025736"
CDS complement(2058095..2058397)
/locus_tag="SF2034"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707870.1"
/db_xref="GeneID:1025736"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(2058125..2058397)
/locus_tag="SF2034"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 2058463..2060396
/note="partial"
/mobile_element_type="insertion sequence:ISSfl4"
gene complement(2059296..2059643)
/locus_tag="SF2036"
/db_xref="GeneID:1025791"
CDS complement(2059296..2059643)
/locus_tag="SF2036"
/note="Code: L; COG: COG3436"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 ORF2"
/protein_id="NP_707872.1"
/db_xref="GeneID:1025791"
/translation="MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIF
VFRGRSGKMVKILWADRDGLCLFAKLLERGRFVWPVTREGKVHLTPAQLSMLLEGIAW
QHPKRTERPGIRI"
misc_feature complement(2059347..2059616)
/locus_tag="SF2036"
/note="IS66 family insertion sequence element accessory
protein TnpB; Region: IS66_TnpB; NF033819"
/db_xref="CDD:411392"
gene complement(2059640..2060314)
/locus_tag="SF2037"
/db_xref="GeneID:1025273"
CDS complement(2059640..2060314)
/locus_tag="SF2037"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 transposase"
/protein_id="NP_707873.1"
/db_xref="GeneID:1025273"
/translation="MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTI
HTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSRE
FKVRLAKQALQPGAVVARIAREHDINNNLLFKWKSQYEDGLLSDDDIQECMPVPVALT
DTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPELLRALIRE
MKGGIR"
misc_feature complement(2059697..2060281)
/locus_tag="SF2037"
/note="IS66-like element accessory protein TnpA; Region:
IS66_access_TnpA; NF038385"
/db_xref="CDD:439678"
gene complement(2060413..2060628)
/locus_tag="SF2038"
/db_xref="GeneID:1026906"
CDS complement(2060413..2060628)
/locus_tag="SF2038"
/codon_start=1
/transl_table=11
/product="lysis protein S"
/protein_id="NP_707874.1"
/db_xref="GeneID:1026906"
/translation="MKSMDKISTGIAYGTSAGSAGYWFLQWLDQVSPSQWAAIGVLGS
LVLGFLTYLTNLYFKIREDKRKAARGE"
misc_feature complement(2060425..2060616)
/locus_tag="SF2038"
/note="Bacteriophage P21 holin S; Region: Phage_holin_2_1;
pfam04971"
/db_xref="CDD:428228"
gene complement(2060921..2060995)
/locus_tag="SF4477"
/db_xref="GeneID:3161783"
tRNA complement(2060921..2060995)
/locus_tag="SF4477"
/product="tRNA-Gly"
/codon_recognized="GGA"
/db_xref="GeneID:3161783"
gene complement(2060999..2061074)
/locus_tag="SF4478"
/db_xref="GeneID:3161794"
tRNA complement(2060999..2061074)
/locus_tag="SF4478"
/product="tRNA-Thr"
/codon_recognized="ACA"
/db_xref="GeneID:3161794"
gene complement(2061077..2061153)
/locus_tag="SF4479"
/db_xref="GeneID:3161778"
tRNA complement(2061077..2061153)
/locus_tag="SF4479"
/product="tRNA-Lys"
/codon_recognized="AAA"
/db_xref="GeneID:3161778"
gene complement(2061155..2061230)
/locus_tag="SF4480"
/db_xref="GeneID:3161798"
tRNA complement(2061155..2061230)
/locus_tag="SF4480"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161798"
gene complement(2061429..2062112)
/locus_tag="SF2039"
/db_xref="GeneID:1025262"
CDS complement(2061429..2062112)
/locus_tag="SF2039"
/codon_start=1
/transl_table=11
/product="Q antiterminator of prophage"
/protein_id="NP_707875.2"
/db_xref="GeneID:1025262"
/translation="MNNQYLQFVREQLIIATADLSGATKGQLEAWQENAMFDTGRYRR
KKIRYRDEVTGKMITRDNPPIPGKQSLAKGTSIPLVSPVEFSTSSWRRAVLSLEEHYK
AWLLWCYSGSICWEYQIAITQWAWNEFNAQSGTRKIAGKTQERLKKLIWLAAQAVKAE
LFGGEGYEYQELALLAGVTTKNWSKTFTRHWVAMKHIFHRLDSEALLFVMRTRSKKRR
HFQSKVLQK"
misc_feature complement(2061468..2062100)
/locus_tag="SF2039"
/note="Phage antitermination protein Q; Region:
Phage_antiter_Q; pfam06323"
/db_xref="CDD:428887"
gene complement(2062109..2062474)
/locus_tag="SF2040"
/db_xref="GeneID:1025267"
CDS complement(2062109..2062474)
/locus_tag="SF2040"
/codon_start=1
/transl_table=11
/product="crossover junction endodeoxyribonuclease"
/protein_id="NP_707876.1"
/db_xref="GeneID:1025267"
/translation="MTERIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRDVALIVR
QQRLKLNLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLIDDEQFDEINIVR
GQLVPGGRLGIKITELGCA"
misc_feature complement(2062121..2062468)
/locus_tag="SF2040"
/note="Holliday junction resolvase RusA (prophage-encoded
endonuclease) [Replication, recombination and repair];
Region: RusA; COG4570"
/db_xref="CDD:443627"
gene complement(2062475..2063461)
/locus_tag="SF2041"
/db_xref="GeneID:1025735"
CDS complement(2062475..2063461)
/locus_tag="SF2041"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707877.2"
/db_xref="GeneID:1025735"
/translation="MPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLVEDKTLLPFFS
NARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLR
DQTSESLEQLAHQNLSAWMIDVIGHAISGTQERELSLAELSWWAVRNQVADALPEAVL
RRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLAPLPHAHQQQNPPQEETVVS
IAVDPESPAQYLQRQKPQREEMPVYTRWVKTQKCMTCGNQADDPHHIIGHGLGGMGTK
ADDLFVIPLCRKCHNELHAGVKDFEEKHGSQLLLLIRFLMHARNSGVLKWKA"
misc_feature complement(2062535..2063053)
/locus_tag="SF2041"
/note="Protein of unknown function (DUF968); Region:
DUF968; cl23554"
/db_xref="CDD:474016"
gene complement(2063535..2063813)
/locus_tag="SF2042"
/db_xref="GeneID:1026537"
CDS complement(2063535..2063813)
/locus_tag="SF2042"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707878.1"
/db_xref="GeneID:1026537"
/translation="MAHDTKFYNSDNSAAPASRHGRRSHAFKSDGYQHDPCTEEQAEW
LIQRYRRHGYEIKKALSLDYRHWIIFVRLPYSERPPRPSCTFQQRIWR"
gene 2063616..2063939
/locus_tag="SF2042a"
/db_xref="GeneID:16608338"
CDS 2063616..2063939
/locus_tag="SF2042a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439261.1"
/db_xref="GeneID:16608338"
/translation="MTIIETEGFLNLVSVSAVALNQPFSLFFGAGVVLIPVRFECMRT
PPVPAGRGGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQKKQNPPKRVKCG
CVEDA"
gene complement(2063981..2064193)
/locus_tag="SF2042b"
/db_xref="GeneID:16608339"
CDS complement(2063981..2064193)
/locus_tag="SF2042b"
/codon_start=1
/transl_table=11
/product="regulatory protein"
/protein_id="YP_008439262.1"
/db_xref="GeneID:16608339"
/translation="MLNTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
RKDLCEVRIRTGQTEVAVFTAYEPEE"
misc_feature complement(2063996..2064118)
/locus_tag="SF2042b"
/note="Hok/gef family; Region: HOK_GEF; pfam01848"
/db_xref="CDD:426473"
gene complement(2064396..2064614)
/locus_tag="SF2042c"
/db_xref="GeneID:16608340"
CDS complement(2064396..2064614)
/locus_tag="SF2042c"
/codon_start=1
/transl_table=11
/product="membrane protein"
/protein_id="YP_008439263.1"
/db_xref="GeneID:16608340"
/translation="MFKCYCTLIVGGIMKNALQFLFVAFWLFASCMPIIFTARYMEKI
DVLILMFGHINALFLGVFMAVMCIEYWR"
gene complement(2064788..2065123)
/locus_tag="SF2043"
/db_xref="GeneID:1025253"
CDS complement(2064788..2065123)
/locus_tag="SF2043"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_707879.2"
/db_xref="GeneID:1025253"
/translation="MARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDW
KYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKAVHFYEQLKRENPPASGNQINGL
TMSVKRPAN"
gene complement(2066449..2066538)
/locus_tag="SF4481"
/db_xref="GeneID:3161786"
tRNA complement(2066449..2066538)
/locus_tag="SF4481"
/product="tRNA-Ser"
/codon_recognized="UCG"
/db_xref="GeneID:3161786"
gene 2066593..2067429
/locus_tag="SF2045"
/db_xref="GeneID:1026909"
CDS 2066593..2067429
/locus_tag="SF2045"
/note="Code: S; COG: COG3228"
/codon_start=1
/transl_table=11
/product="DgsA anti-repressor MtfA"
/protein_id="NP_707881.1"
/db_xref="GeneID:1026909"
/translation="MQFCSSDEFASKTMIKWPWKVQESAHQTALPWQEALSIPLLTCL
TEQEQSKLVALAERFLQQKRLVPLQGFELNSLRSCRIALLFCLPVLELGLEWLDGFHE
VLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLII
HEVAHKLDTRNGDRASGVPFISLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYA
ASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATN
VH"
misc_feature 2066632..2067411
/locus_tag="SF2045"
/note="DgsA anti-repressor MtfA; Provisional; Region:
PRK15410"
/db_xref="CDD:185308"
gene 2067530..2067605
/locus_tag="SF4482"
/db_xref="GeneID:3161858"
tRNA 2067530..2067605
/locus_tag="SF4482"
/product="tRNA-Asn"
/codon_recognized="AAC"
/db_xref="GeneID:3161858"
gene 2067986..2069028
/locus_tag="SF2046"
/pseudogene="unknown"
/db_xref="GeneID:1025733"
mobile_element complement(2069128..2070376)
/mobile_element_type="insertion sequence:IS911"
gene complement(2069136..2069975)
/locus_tag="SF2048"
/db_xref="GeneID:1025278"
CDS complement(2069136..2069975)
/locus_tag="SF2048"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_707884.1"
/db_xref="GeneID:1025278"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(2069145..2069954)
/locus_tag="SF2048"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(2070002..2070340)
/locus_tag="SF2049"
/db_xref="GeneID:1026550"
CDS complement(2070002..2070340)
/locus_tag="SF2049"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_707885.1"
/db_xref="GeneID:1026550"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(2070032..2070301)
/locus_tag="SF2049"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
misc_feature 2070377..2072304
/note="'Similar to Escherichia coli K12 transport protein,
shikimate gi: 1788292 (439 aa). BLAST with identity of 97%
in 643 aa. This CDS has been disrupted by insertion. The
sequence has been checked and is believed to be correct.'"
mobile_element 2070867..2071630
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 2070931..2071233
/locus_tag="SF2051"
/db_xref="GeneID:1026726"
CDS 2070931..2071233
/locus_tag="SF2051"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707886.1"
/db_xref="GeneID:1026726"
/translation="MSRKTRRYSKEFKAEAVRTVLENQLSISEDASRLFLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 2070931..2071203
/locus_tag="SF2051"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2071269..2072060
/locus_tag="SF2052"
/db_xref="GeneID:1025259"
CDS 2071269..2072060
/locus_tag="SF2052"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707887.1"
/db_xref="GeneID:1025259"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLACLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA
GLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYR
FNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <2071269..2072033
/locus_tag="SF2052"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
mobile_element 2071629..2072103
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene 2072412..2073866
/gene="amn"
/locus_tag="SF2053"
/db_xref="GeneID:1025921"
CDS 2072412..2073866
/gene="amn"
/locus_tag="SF2053"
/note="Code: F; COG: COG0775"
/codon_start=1
/transl_table=11
/product="AMP nucleosidase"
/protein_id="NP_707888.2"
/db_xref="GeneID:1025921"
/translation="MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGKYITIGELPDE
NARKQGLFVYPSLTVTWDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLT
LLYQDYGAHISVQPSQHEIPYPYVIDGSELTLDRSMSADLTRYFPTTELAQIGDETAD
GIYHPTEFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGC
SQILDPDSPYIALSCAGGNWITAETEAPEEAISDLAWKKHQMPAWHLITADGQGITLV
NIGVGPSNAKTICDHLAVLRPDIWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAV
LPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASAL
RFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAIS
EHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR"
misc_feature 2072412..2073863
/gene="amn"
/locus_tag="SF2053"
/note="AMP nucleosidase; Provisional; Region: PRK08292"
/db_xref="CDD:236222"
gene 2074209..2074925
/locus_tag="SF2054"
/db_xref="GeneID:1025730"
CDS 2074209..2074925
/locus_tag="SF2054"
/note="Code: S; COG: COG0217"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707889.1"
/db_xref="GeneID:1025730"
/translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRD
VTEEEGNIVIYTEPADLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
VDALEDDDDVQKVYHNVANL"
misc_feature 2074209..2074916
/locus_tag="SF2054"
/note="YebC/PmpR family DNA-binding transcriptional
regulator; Region: PRK12378"
/db_xref="CDD:237084"
gene complement(2075381..2075456)
/locus_tag="SF4483"
/db_xref="GeneID:3161838"
tRNA complement(2075381..2075456)
/locus_tag="SF4483"
/product="tRNA-Asn"
/codon_recognized="AAC"
/db_xref="GeneID:3161838"
gene complement(2075557..2077183)
/gene="yeeO"
/locus_tag="SF2055"
/pseudo
/db_xref="GeneID:1025361"
misc_feature complement(2075557..2077183)
/gene="yeeO"
/locus_tag="SF2055"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 2367126 (548 aa). BLAST with
identity of 98% in 542 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 2077189..2077264
/locus_tag="SF4484"
/db_xref="GeneID:3161841"
tRNA 2077189..2077264
/locus_tag="SF4484"
/product="tRNA-Asn"
/codon_recognized="AAC"
/db_xref="GeneID:3161841"
gene complement(2077302..2078252)
/gene="cbl"
/locus_tag="SF2056"
/db_xref="GeneID:1026621"
CDS complement(2077302..2078252)
/gene="cbl"
/locus_tag="SF2056"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="transcriptional regulator Cbl"
/protein_id="NP_707890.1"
/db_xref="GeneID:1026621"
/translation="MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDEF
GIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHT
QARYSLPEVIKAFRELFPEVRLELIQGSPQEIATLLQNGEADIGIASERLSNDPQLVA
FPWFCWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGRSRTDDAFTRKGLPA
DIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKR
GQLQRNYVWRFLELCNAGLSVEDIKRQVMENSEEEIDYQI"
misc_feature complement(2077305..2078252)
/gene="cbl"
/locus_tag="SF2056"
/note="HTH-type transcriptional regulator Cbl; Region:
cbl; PRK12679"
/db_xref="CDD:183676"
gene complement(2078354..2079271)
/gene="nac"
/locus_tag="SF2057"
/db_xref="GeneID:1025279"
CDS complement(2078354..2079271)
/gene="nac"
/locus_tag="SF2057"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="nitrogen assimilation transcriptional regulator"
/protein_id="NP_707891.2"
/db_xref="GeneID:1025279"
/translation="MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVAILEGELN
QQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQSLSGQVSIGFAPGTA
ASSITMPLLQAVRAEFPEVVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQA
LLKEDLFLVGTQDCPGQNVDVNAIAQMNLFLPSDYSAVRLRVDEAFSLRRLTAKVIGE
IESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANL
SPQAQAVKELLMSVISSPVMEKRQWQLVS"
misc_feature complement(2078357..2079271)
/gene="nac"
/locus_tag="SF2057"
/note="nitrogen assimilation transcriptional regulator;
Provisional; Region: PRK11233"
/db_xref="CDD:183045"
gene 2079599..2079675
/locus_tag="SF4485"
/db_xref="GeneID:3161857"
tRNA 2079599..2079675
/locus_tag="SF4485"
/product="tRNA-OTHER"
/note="tRNA-Undet;
codon recognized: ???"
/db_xref="GeneID:3161857"
gene complement(2079731..2080666)
/gene="erfK"
/locus_tag="SF2058"
/db_xref="GeneID:1026578"
CDS complement(2079731..2080666)
/gene="erfK"
/locus_tag="SF2058"
/note="Code: S; COG: COG1376"
/codon_start=1
/transl_table=11
/product="L,D-transpeptidase"
/protein_id="NP_707892.1"
/db_xref="GeneID:1026578"
/translation="MMRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVP
DHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVN
VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRREYA
KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
LFDNVPVGTRVQIIDQPVKYTTEPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLR
AFINGQEVDVNRANAALQHRSGMPVQISSGSRQMF"
misc_feature complement(2079734..2080663)
/gene="erfK"
/locus_tag="SF2058"
/note="L,D-transpeptidase; Provisional; Region: PRK10190"
/db_xref="CDD:182294"
gene complement(2080728..2081807)
/gene="cobT"
/locus_tag="SF2059"
/db_xref="GeneID:1025890"
CDS complement(2080728..2081807)
/gene="cobT"
/locus_tag="SF2059"
/note="Code: H; COG: COG2038"
/codon_start=1
/transl_table=11
/product="nicotinate-nucleotide--dimethylbenzimidazole
phosphoribosyltransferase"
/protein_id="NP_707893.1"
/db_xref="GeneID:1025890"
/translation="MQIIADLLNTIPAINSAAMSRAQRHVDGLFKPVGSLGKLEALAI
QLAGMPGVNGIPHVGKKAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVL
AAQAGANVHVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRRQAEKLLLDVICYT
RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRDPEEVVGIGANLPTDKLANKIDVV
RRAITLNQPNPQDGVDVLAKVGGFDLVGIAGVMLGAASCGLPVLLDGFLSYAAALAAC
QMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMDMRLGEGSGAALAMSIIEAACA
IYNNMGELAASNIVLPGNTTSDLNS"
misc_feature complement(2080755..2081807)
/gene="cobT"
/locus_tag="SF2059"
/note="NaMN:DMB phosphoribosyltransferase [Coenzyme
transport and metabolism]; Region: CobT; COG2038"
/db_xref="CDD:441641"
gene complement(2081819..2082562)
/gene="cobS"
/locus_tag="SF2060"
/db_xref="GeneID:1026747"
CDS complement(2081819..2082562)
/gene="cobS"
/locus_tag="SF2060"
/note="Code: H; COG: COG0368"
/codon_start=1
/transl_table=11
/product="adenosylcobinamide-GDP ribazoletransferase"
/protein_id="NP_707894.2"
/db_xref="GeneID:1026747"
/translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL
GAISGLVFMVLQAWCGAPLAALFSVLVLALMTGEFHLDGLADTCDGVFSARSRDRMLE
IMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILASLAAACAVSRGTAALLMYRH
RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLLGMHGVAAMVVTMVAIFILGQL
LKRTLGGQTGDTLGAAIELGELVFLLALL"
misc_feature complement(2081825..2082562)
/gene="cobS"
/locus_tag="SF2060"
/note="cobalamin 5'-phosphate synthase/cobalamin synthase;
Region: cobS; TIGR00317"
/db_xref="CDD:213524"
gene complement(2082559..2083068)
/gene="cobU"
/locus_tag="SF2061"
/db_xref="GeneID:1027488"
CDS complement(2082559..2083068)
/gene="cobU"
/locus_tag="SF2061"
/note="Code: H; COG: COG2087"
/codon_start=1
/transl_table=11
/product="adenosylcobinamide kinase/adenosylcobinamide
phosphate guanyltransferase"
/protein_id="NP_707895.1"
/db_xref="GeneID:1027488"
/translation="MVVSAIASTPHSSQVLYIATSQILDDEMAARIEHHRQSRPEHWR
TVERWQHLDELIHADINPNEAVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINA
EIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLV
VSGIGVKIK"
misc_feature complement(2082562..2083029)
/gene="cobU"
/locus_tag="SF2061"
/note="adenosylcobinamide
kinase/adenosylcobinamide-phosphate guanylyltransferase;
Validated; Region: cobU; PRK05800"
/db_xref="CDD:235612"
misc_feature complement(2082964..2082966)
/gene="cobU"
/locus_tag="SF2061"
/note="putative catalytic site [active]"
/db_xref="CDD:410861"
mobile_element complement(2083037..2084300)
/mobile_element_type="insertion sequence:IS600"
gene complement(2083080..2083898)
/locus_tag="SF2062"
/db_xref="GeneID:1025277"
CDS complement(2083080..2083898)
/locus_tag="SF2062"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_707896.1"
/db_xref="GeneID:1025277"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATREGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature complement(2083107..>2083898)
/locus_tag="SF2062"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2083934..2084236)
/locus_tag="SF2063"
/db_xref="GeneID:1025282"
CDS complement(2083934..2084236)
/locus_tag="SF2063"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_707897.1"
/db_xref="GeneID:1025282"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature complement(2083964..2084236)
/locus_tag="SF2063"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
mobile_element 2084425..2085730
/mobile_element_type="insertion sequence:IS629"
gene 2084479..2084805
/locus_tag="SF2064"
/db_xref="GeneID:1025792"
CDS 2084479..2084805
/locus_tag="SF2064"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_707898.1"
/db_xref="GeneID:1025792"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature 2084482..2084769
/locus_tag="SF2064"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2085020..2085688
/locus_tag="SF2065"
/db_xref="GeneID:1027348"
CDS 2085020..2085688
/locus_tag="SF2065"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 integrase core
domain-containing protein"
/protein_id="NP_707899.1"
/db_xref="GeneID:1027348"
/translation="MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGD
RVNRQFVAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGCIVGWRVSSSMETTFVLD
ALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESIN
GLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGND
DLAA"
misc_feature 2085020..2085685
/locus_tag="SF2065"
/note="DDE superfamily endonuclease; Region: DDE_3;
cl46863"
/db_xref="CDD:481203"
gene 2085910..2086392
/locus_tag="SF2066"
/db_xref="GeneID:1025732"
CDS 2085910..2086392
/locus_tag="SF2066"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707900.1"
/db_xref="GeneID:1025732"
/translation="MRYPTREYQHDSPSDLLLRRPQGIKPKKKIVKIRDSGLTRKVIS
ASTEHRIDAYLLVRTTFHGRSSSTRLEGHSGSMLRIWRRYASGSIPFRRQVPAFPATS
RNLSAEAGIRGKNALPGHESPGHWSSNQSRFSQHGTNIFGEKLVTGSWSAQRVSNQCS
"
gene complement(2086551..2086946)
/gene="yeeX"
/locus_tag="SF2067"
/db_xref="GeneID:1025281"
CDS complement(2086551..2086946)
/gene="yeeX"
/locus_tag="SF2067"
/note="Code: S; COG: COG2926"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707901.1"
/db_xref="GeneID:1025281"
/translation="MLALTNSGCLNESDSHIIRGIKMETTKPSFQDVLEFVRLFRRKN
KLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYI
IKNAELSKERRDISKKLKAMGEMKNGEAK"
misc_feature complement(2086575..2086874)
/gene="yeeX"
/locus_tag="SF2067"
/note="Protein of unknown function (DUF496); Region:
DUF496; cl23839"
/db_xref="CDD:474076"
gene complement(2087052..2087173)
/gene="yeeA"
/locus_tag="SF2068"
/pseudo
/db_xref="GeneID:1025731"
misc_feature complement(2087052..2087173)
/gene="yeeA"
/locus_tag="SF2068"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788318 (353 aa). BLAST with
identity of 97% in 40 aa. This CDS has been truncated. The
sequence has been checked and is believed to be correct."
/pseudo
mobile_element 2087161..2087825
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene 2087163..2087783
/locus_tag="SF2069"
/db_xref="GeneID:1025276"
CDS 2087163..2087783
/locus_tag="SF2069"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 integrase core
domain-containing protein"
/protein_id="NP_707902.1"
/db_xref="GeneID:1025276"
/translation="MVVIGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWV
ADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVH
HSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNR
AEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA"
misc_feature <2087163..2087780
/locus_tag="SF2069"
/note="DDE superfamily endonuclease; Region: DDE_3;
cl46863"
/db_xref="CDD:481203"
gene 2088328..2089752
/gene="sbcB"
/locus_tag="SF2070"
/db_xref="GeneID:1025875"
CDS 2088328..2089752
/gene="sbcB"
/locus_tag="SF2070"
/note="Code: L; COG: COG2925"
/codon_start=1
/transl_table=11
/product="exonuclease I"
/protein_id="NP_707903.1"
/db_xref="GeneID:1025875"
/translation="MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNVIGE
PEVFYCKPADDYLPRPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYN
NVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGL
PSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMA
LIDVPQMKPLAHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMADLAGDISPLLELDID
TLRERLYTAKADLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLK
ILRENPQVREKVVAIFAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPA
LDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRHQVFTPEFLQGYADELQMLV
QQYADDKEKVALLKALWQYAEEIV"
misc_feature 2088334..2089749
/gene="sbcB"
/locus_tag="SF2070"
/note="exonuclease I; Provisional; Region: sbcB; PRK11779"
/db_xref="CDD:236979"
gene complement(2089795..2090022)
/gene="yeeD"
/locus_tag="SF2071"
/db_xref="GeneID:1025869"
CDS complement(2089795..2090022)
/gene="yeeD"
/locus_tag="SF2071"
/note="Code: K; COG: COG0425"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707904.1"
/db_xref="GeneID:1025869"
/translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
misc_feature complement(2089801..2090016)
/gene="yeeD"
/locus_tag="SF2071"
/note="thiosulfate utilization sulfurtransferase
TsuB/YeeD; Region: TusA_like_YeeD; NF041048"
/db_xref="CDD:468977"
gene complement(2090036..2091094)
/gene="yeeE"
/locus_tag="SF2072"
/db_xref="GeneID:1025883"
CDS complement(2090036..2091094)
/gene="yeeE"
/locus_tag="SF2072"
/note="Code: R; COG: COG2391"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_707905.1"
/db_xref="GeneID:1025883"
/translation="MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYA
LLIAISAQSVGVFALIQAGLLTYEAGAFPWLGTVIGGYLFGLGIVLAGGCATGTWYRA
GEGLIGSWIALFTYMVMSAVMRSPHASGLNQTLQHYTTEHNSIAETFNLSVWPLVTVL
LVITLWVVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLS
EATGRMFGLGVTSPTANILQFLVAGDVKYINWGVFLVLGIFVEAFIAAKASREFRVRA
ADAQTTLRSGLGGVLMGFGASIAGGCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASW
LVYVRPQRKARLATAAAN"
misc_feature complement(2090048..2091091)
/gene="yeeE"
/locus_tag="SF2072"
/note="thiosulfate utilization transporter TsuA/YeeE;
Region: thio_trans_TsuA; NF041049"
/db_xref="CDD:468978"
gene complement(2091273..2092631)
/gene="yeeF"
/locus_tag="SF2073"
/db_xref="GeneID:1025292"
CDS complement(2091273..2092631)
/gene="yeeF"
/locus_tag="SF2073"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="amino acid/amine transport protein"
/protein_id="NP_707906.1"
/db_xref="GeneID:1025292"
/translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANVNTVIV
VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
VA"
misc_feature complement(2091327..2092610)
/gene="yeeF"
/locus_tag="SF2073"
/note="Serine transporter YbeC, amino acid:H+ symporter
family [Amino acid transport and metabolism]; Region:
PotE; COG0531"
/db_xref="CDD:440297"
gene complement(2092844..2093827)
/gene="yeeY"
/locus_tag="SF2074"
/db_xref="GeneID:1025271"
CDS complement(2092844..2093827)
/gene="yeeY"
/locus_tag="SF2074"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_707907.2"
/db_xref="GeneID:1025271"
/translation="MKPLLDVLMILDAIEKEGSFAAASAKLYKTPSALSYTVHKLESD
LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
AITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQ
TAGLASGWWRDEILANSAIAGVYAKSDDGKSAIQRKIIMTSLSFSCHFPPI"
misc_feature complement(<2093384..2093815)
/gene="yeeY"
/locus_tag="SF2074"
/note="LysR transcriptional regulator; Provisional;
Region: rbcR; CHL00180"
/db_xref="CDD:177082"
misc_feature complement(2092961..2093548)
/gene="yeeY"
/locus_tag="SF2074"
/note="Type 2 periplasmic binding fold superfamily;
Region: Periplasmic_Binding_Protein_Type_2; cl21456"
/db_xref="CDD:473866"
misc_feature complement(order(2093126..2093131,2093135..2093140,
2093156..2093173,2093444..2093464,2093468..2093470,
2093480..2093482,2093489..2093494,2093498..2093503))
/gene="yeeY"
/locus_tag="SF2074"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene complement(2093873..2094697)
/locus_tag="SF2075"
/db_xref="GeneID:1025269"
CDS complement(2093873..2094697)
/locus_tag="SF2075"
/note="Code: MG; COG: COG0451"
/codon_start=1
/transl_table=11
/product="sugar metabolism protein"
/protein_id="NP_707908.1"
/db_xref="GeneID:1025269"
/translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG
IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAH
RIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA
GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
ARNVFYPQMARLLGLQPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
misc_feature complement(2093921..2094688)
/locus_tag="SF2075"
/note="atypical (a) SDRs, subgroup 4; Region: SDR_a4;
cd05266"
/db_xref="CDD:187576"
misc_feature complement(order(2094212..2094223,2094281..2094283,
2094293..2094295,2094362..2094370,2094467..2094475,
2094599..2094607,2094662..2094670,2094674..2094676))
/locus_tag="SF2075"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:187576"
gene complement(2094780..2095034)
/gene="yoeB"
/locus_tag="SF2076"
/db_xref="GeneID:1025103"
CDS complement(2094780..2095034)
/gene="yoeB"
/locus_tag="SF2076"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707909.1"
/db_xref="GeneID:1025103"
/translation="MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGK
PEPLKHNLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY"
misc_feature complement(2094783..2095034)
/gene="yoeB"
/locus_tag="SF2076"
/note="Toxin component of the Txe-Axe toxin-antitoxin
module, Txe/YoeB family [Defense mechanisms]; Region:
COG4115"
/db_xref="CDD:443291"
mobile_element complement(2095041..2095808)
/mobile_element_type="insertion sequence:IS1"
gene complement(2095056..2095451)
/gene="insB"
/locus_tag="SF2077"
/db_xref="GeneID:1026772"
CDS complement(2095056..2095451)
/gene="insB"
/locus_tag="SF2077"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707910.1"
/db_xref="GeneID:1026772"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(2095059..2095448)
/gene="insB"
/locus_tag="SF2077"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2095478..2095753)
/gene="insA"
/locus_tag="SF2078"
/db_xref="GeneID:1025275"
CDS complement(2095478..2095753)
/gene="insA"
/locus_tag="SF2078"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707911.1"
/db_xref="GeneID:1025275"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<2095481..2095732)
/gene="insA"
/locus_tag="SF2078"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(2095787..2096059)
/gene="yefM"
/locus_tag="SF2079"
/db_xref="GeneID:1025294"
CDS complement(2095787..2096059)
/gene="yefM"
/locus_tag="SF2079"
/note="Code: S; COG: COG2161"
/codon_start=1
/transl_table=11
/product="antitoxin YefM"
/protein_id="NP_707912.1"
/db_xref="GeneID:1025294"
/translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE
YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIEWVMLPTY"
misc_feature complement(2095811..2096059)
/gene="yefM"
/locus_tag="SF2079"
/note="YoeB-YefM toxin-antitoxin system antitoxin YefM;
Region: PRK11409"
/db_xref="CDD:171099"
gene 2096529..2097428
/gene="hisG"
/locus_tag="SF2081"
/db_xref="GeneID:1025908"
CDS 2096529..2097428
/gene="hisG"
/locus_tag="SF2081"
/note="Code: E; COG: COG0040"
/codon_start=1
/transl_table=11
/product="ATP phosphoribosyltransferase"
/protein_id="NP_707914.2"
/db_xref="GeneID:1025908"
/translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
NMPIDILRVRDDDIPCLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
TMEKLKALGASSILVLPIEKMME"
misc_feature 2096541..2097422
/gene="hisG"
/locus_tag="SF2081"
/note="ATP phosphoribosyltransferase [Amino acid transport
and metabolism]; Region: HisG; COG0040"
/db_xref="CDD:439810"
gene 2097434..2098738
/gene="hisD"
/locus_tag="SF2082"
/db_xref="GeneID:1025296"
CDS 2097434..2098738
/gene="hisD"
/locus_tag="SF2082"
/note="Code: E; COG: COG0141"
/codon_start=1
/transl_table=11
/product="bifunctional histidinal dehydrogenase/
histidinol dehydrogenase"
/protein_id="NP_707915.2"
/db_xref="GeneID:1025296"
/translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
TRGDEALREYSAKFDKTTVTALKVSADEIAAASERLSDELKQAMAVAVKSIETFHTAQ
KLPPVDVETQLGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLC
SPPPIADEILYAAQLCDVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPDAD
MARRVAEAVERQLAELPRAETTRQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRN
ARELVDGITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNVLKEQA"
misc_feature 2097446..2098714
/gene="hisD"
/locus_tag="SF2082"
/note="bifunctional histidinal dehydrogenase/ histidinol
dehydrogenase; Reviewed; Region: hisD; PRK00877"
/db_xref="CDD:234853"
misc_feature order(2097605..2097607,2097821..2097823,2097827..2097832,
2097854..2097856,2097917..2097919,2097986..2097991,
2097995..2097997,2098058..2098066,2098070..2098075,
2098217..2098219)
/gene="hisD"
/locus_tag="SF2082"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:119329"
misc_feature order(2097680..2097685,2097692..2097697,2097701..2097703,
2097710..2097715,2097722..2097727,2097734..2097739,
2097758..2097760,2097764..2097766,2097776..2097790,
2097797..2097799,2097803..2097805,2097839..2097853,
2098043..2098045,2098088..2098090,2098100..2098102,
2098181..2098186,2098193..2098198,2098202..2098210,
2098214..2098219,2098424..2098426,2098439..2098441,
2098448..2098453,2098457..2098483,2098487..2098489,
2098493..2098498,2098502..2098516,2098520..2098522,
2098526..2098528,2098556..2098561,2098565..2098579,
2098583..2098588,2098595..2098618,2098661..2098666,
2098670..2098690)
/gene="hisD"
/locus_tag="SF2082"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:119329"
misc_feature order(2097845..2097847,2097851..2097853,2098142..2098144,
2098217..2098219,2098409..2098414,2098499..2098501,
2098511..2098516,2098532..2098534,2098673..2098675,
2098679..2098681,2098688..2098690)
/gene="hisD"
/locus_tag="SF2082"
/note="product binding site [active]"
/db_xref="CDD:119329"
misc_feature order(2097851..2097853,2098142..2098144,2098208..2098210,
2098217..2098219,2098409..2098414,2098499..2098501,
2098511..2098516,2098532..2098534,2098673..2098675,
2098679..2098681,2098688..2098690)
/gene="hisD"
/locus_tag="SF2082"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119329"
misc_feature order(2098208..2098210,2098217..2098219,2098511..2098513,
2098688..2098690)
/gene="hisD"
/locus_tag="SF2082"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:119329"
misc_feature 2098409..2098414
/gene="hisD"
/locus_tag="SF2082"
/note="catalytic residues [active]"
/db_xref="CDD:119329"
gene 2098735..2099805
/gene="hisC"
/locus_tag="SF2083"
/db_xref="GeneID:1026780"
CDS 2098735..2099805
/gene="hisC"
/locus_tag="SF2083"
/note="Code: E; COG: COG0079"
/codon_start=1
/transl_table=11
/product="histidinol-phosphate aminotransferase"
/protein_id="NP_707916.1"
/db_xref="GeneID:1026780"
/translation="MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
FKLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA
ILYCPPTYGMYSVSAETIGVECRTVPTLENWQLDLQGISDKLDGVKVVYVCSPNNPTG
QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
AGLRCGFTLANEEVINLLMKVIPPYPLSTPVADIAAQALSPQGIVAMSERVAQIITER
EYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL
RITVGTREESQRVIDALRAEQV"
misc_feature 2098765..2099790
/gene="hisC"
/locus_tag="SF2083"
/note="histidinol-phosphate aminotransferase; Region:
hisC; TIGR01141"
/db_xref="CDD:273467"
gene 2099805..2100872
/gene="hisB"
/locus_tag="SF2084"
/db_xref="GeneID:1025893"
CDS 2099805..2100872
/gene="hisB"
/locus_tag="SF2084"
/codon_start=1
/transl_table=11
/product="imidazole glycerol-phosphate
dehydratase/histidinol phosphatase"
/protein_id="NP_707917.2"
/db_xref="GeneID:1025893"
/translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ
KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
CRKPKVKLVEGYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE
QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI
NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
RTLRQAIRVEGDTLPSSKGVL"
misc_feature 2099808..2100869
/gene="hisB"
/locus_tag="SF2084"
/note="bifunctional
histidinol-phosphatase/imidazoleglycerol-phosphate
dehydratase HisB; Region: PRK05446"
/db_xref="CDD:235471"
gene 2100872..2101462
/gene="hisH"
/locus_tag="SF2085"
/db_xref="GeneID:1025298"
CDS 2100872..2101462
/gene="hisH"
/locus_tag="SF2085"
/note="Code: E; COG: COG0118"
/codon_start=1
/transl_table=11
/product="imidazole glycerol phosphate synthase subunit
HisH"
/protein_id="NP_707918.1"
/db_xref="GeneID:1025298"
/translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDIVLLADKLFL
PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
misc_feature 2100872..2101459
/gene="hisH"
/locus_tag="SF2085"
/note="imidazole glycerol phosphate synthase subunit HisH;
Provisional; Region: hisH; PRK13170"
/db_xref="CDD:183877"
misc_feature order(2100992..2101015,2101094..2101108,2101403..2101405,
2101409..2101411)
/gene="hisH"
/locus_tag="SF2085"
/note="putative active site [active]"
/db_xref="CDD:153219"
misc_feature 2100992..2101015
/gene="hisH"
/locus_tag="SF2085"
/note="oxyanion strand [active]"
/db_xref="CDD:153219"
misc_feature order(2101100..2101102,2101403..2101405,2101409..2101411)
/gene="hisH"
/locus_tag="SF2085"
/note="catalytic triad [active]"
/db_xref="CDD:153219"
gene 2101462..2102199
/gene="hisA"
/locus_tag="SF2086"
/db_xref="GeneID:1025300"
CDS 2101462..2102199
/gene="hisA"
/locus_tag="SF2086"
/note="Code: E; COG: COG0106"
/codon_start=1
/transl_table=11
/product="1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase"
/protein_id="NP_707919.2"
/db_xref="GeneID:1025300"
/translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAE
VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
STAVKSPDVVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTG
VRGVIVGRALLEGKFTVKEAIACWQNA"
misc_feature 2101462..2102175
/gene="hisA"
/locus_tag="SF2086"
/note="1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; Validated; Region:
PRK00748"
/db_xref="CDD:179108"
misc_feature order(2101480..2101482,2101600..2101602,2101846..2101848)
/gene="hisA"
/locus_tag="SF2086"
/note="catalytic residues [active]"
/db_xref="CDD:240083"
gene 2102181..2102957
/gene="hisF"
/locus_tag="SF2087"
/db_xref="GeneID:1025286"
CDS 2102181..2102957
/gene="hisF"
/locus_tag="SF2087"
/note="Code: E; COG: COG0107"
/codon_start=1
/transl_table=11
/product="imidazole glycerol phosphate synthase subunit
HisF"
/protein_id="NP_707920.1"
/db_xref="GeneID:1025286"
/translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI
NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL
DWVEEVQKRGAGEIVLNMMNQDGVCNGYDLKQLKKVREVCHVPLIASGGAGTMEHFLE
AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
misc_feature 2102181..2102948
/gene="hisF"
/locus_tag="SF2087"
/note="imidazoleglycerol phosphate synthase, cyclase
subunit; Region: hisF; TIGR00735"
/db_xref="CDD:273241"
misc_feature order(2102235..2102237,2102328..2102330,2102424..2102426,
2102487..2102492,2102562..2102564,2102568..2102570,
2102628..2102630,2102709..2102711,2102724..2102729,
2102799..2102807,2102871..2102876)
/gene="hisF"
/locus_tag="SF2087"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:240082"
misc_feature order(2102298..2102300,2102313..2102315,2102379..2102381,
2102391..2102393,2102400..2102402,2102406..2102408,
2102463..2102465,2102472..2102477,2102547..2102549,
2102697..2102699,2102781..2102783,2102856..2102858)
/gene="hisF"
/locus_tag="SF2087"
/note="glutamase interaction surface [polypeptide
binding]; other site"
/db_xref="CDD:240082"
gene 2102951..2103562
/gene="hisI"
/locus_tag="SF2088"
/db_xref="GeneID:1025295"
CDS 2102951..2103562
/gene="hisI"
/locus_tag="SF2088"
/codon_start=1
/transl_table=11
/product="bifunctional phosphoribosyl-AMP
cyclohydrolase/phosphoribosyl-ATP pyrophosphatase"
/protein_id="NP_707921.1"
/db_xref="GeneID:1025295"
/translation="MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK
TIESGKVTFFSRTKQRLWIKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTS
SCFGNTAHQWLFLYQLEQLLAERKYADPETSYTAKLYASGTKRIAQKVGEEGVETALA
ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLHKRHQ"
misc_feature 2102957..2103556
/gene="hisI"
/locus_tag="SF2088"
/note="bifunctional phosphoribosyl-AMP
cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;
Region: PRK02759"
/db_xref="CDD:235067"
gene complement(2103748..2104761)
/gene="wzzB"
/locus_tag="SF2089"
/db_xref="GeneID:1025284"
CDS complement(2103748..2104761)
/gene="wzzB"
/locus_tag="SF2089"
/codon_start=1
/transl_table=11
/product="chain length determinant protein WzzB"
/protein_id="NP_707922.1"
/db_xref="GeneID:1025284"
/translation="MRTWKFPSVRVMMRVENNNVSGQNHDPEQIDLIDLLVQLWRGKM
TIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVGQIAGYNNAMNVIYGQAAPKVSD
LQETLIGRFSSAFSALAETLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKL
AQYIQQVDDKVNQELEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQY
ANQAQVTKPQVQQTEDVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDI
EKLKFDDLDIHAYRYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNY
NAK"
misc_feature complement(2103751..2104725)
/gene="wzzB"
/locus_tag="SF2089"
/note="chain length determinant protein WzzB; Provisional;
Region: PRK15471"
/db_xref="CDD:185368"
gene complement(2104871..2105991)
/gene="ugd"
/locus_tag="SF2090"
/pseudo
/db_xref="GeneID:1026613"
misc_feature complement(2104871..2105991)
/gene="ugd"
/locus_tag="SF2090"
/note="Similar to Escherichia coli K12 UDP-glucose
6-dehydrogenase gi: 1788340 (389 aa). BLAST with identity
of 96% in 373 aa. This CDS contains an in-frame stop
codon. The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2106241..2107647)
/gene="gnd"
/locus_tag="SF2091"
/db_xref="GeneID:1025304"
CDS complement(2106241..2107647)
/gene="gnd"
/locus_tag="SF2091"
/note="Code: G; COG: COG0362"
/codon_start=1
/transl_table=11
/product="6-phosphogluconate dehydrogenase"
/protein_id="NP_707923.1"
/db_xref="GeneID:1025304"
/translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIA
ENPGKKLAPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIA
AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQT
FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP
LSLITESVFARYISSLKDQRVAASKVLSGPQAQSAGDKAEFIEKVRSALYLGKIVSYA
QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY
FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
HTYKRIDKEGVFHTEWLD"
misc_feature complement(2106250..2107644)
/gene="gnd"
/locus_tag="SF2091"
/note="6-phosphogluconate dehydrogenase [Carbohydrate
transport and metabolism]; Region: Gnd; COG0362"
/db_xref="CDD:440131"
misc_feature complement(2108112..2109363)
/note="potential frameshift: common BLAST hit:
gi|313200833|ref|YP_004039491.1|
dolichyl-phosphate-mannose-protein mannosyltransferase"
gene complement(2108112..2108663)
/locus_tag="SF2092"
/db_xref="GeneID:1025582"
CDS complement(2108112..2108663)
/locus_tag="SF2092"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707924.1"
/db_xref="GeneID:1025582"
/translation="MIAKKRNIQTFLIFSLATILGGIYWYVRSFWISGDPFSPAGGNI
FGHYLWNEIDLQVQTAEQARHGISPATLDLQQAINKVGSDVVFYAILSVFTLRNNKIL
WVFFSIVLTYVLFWFSVTQGDRYLSPIYPLSVLQVAISIASLIKDINITNYKLGRYFI
LVCIIFFRGDRCILNSNIFILNT"
gene complement(2108764..2109363)
/locus_tag="SF2093"
/db_xref="GeneID:1025863"
CDS complement(2108764..2109363)
/locus_tag="SF2093"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707925.1"
/db_xref="GeneID:1025863"
/translation="MSLNILIIYFLGMVGQFNKIAIFLIFTVCWVLSIIKRQQFRWLA
INNIEFSTLFVILFLVLIFVVTLLSSLRAPGDWDDTMYHLPLARSLVEHHAIVVEQYL
RFPLFPQNADLLMALGLQLGDVRLAQFLANICFFVIACGLVGCSWEITKTYYPGIIAT
ILLFTINPLKDHLGYAYIDLTLSLFCCSQYSYIYSLRKQ"
gene complement(2109580..2110518)
/locus_tag="SF2094"
/pseudogene="unknown"
/db_xref="GeneID:1026357"
gene complement(2110581..2110955)
/gene="rfbI"
/locus_tag="SF2096"
/db_xref="GeneID:1025291"
CDS complement(2110581..2110955)
/gene="rfbI"
/locus_tag="SF2096"
/codon_start=1
/transl_table=11
/product="glycosyl translocase"
/protein_id="NP_707928.1"
/db_xref="GeneID:1025291"
/translation="MLKIGKLLTSSFFSYFLIGIVNTALHWGVFYACYNNLAFGQGRS
NIVGFICAATFSFFANARCSFKVSATKARYFIFIFFMGAMSYLFGVLFDLLALSPIFT
LFTFSLFSLVLGYCASKYFIFR"
misc_feature complement(2110584..2110940)
/gene="rfbI"
/locus_tag="SF2096"
/note="Putative flippase GtrA (transmembrane translocase
of bactoprenol-linked glucose) [Lipid transport and
metabolism]; Region: GtrA; COG2246"
/db_xref="CDD:441847"
gene complement(2110959..2112107)
/gene="rfc"
/locus_tag="SF2097"
/db_xref="GeneID:1025297"
CDS complement(2110959..2112107)
/gene="rfc"
/locus_tag="SF2097"
/codon_start=1
/transl_table=11
/product="O-antigen polymerase"
/protein_id="NP_707929.1"
/db_xref="GeneID:1025297"
/translation="MNNINKIFITFLCIELIIGGGGRLLEPLGIFPLRYLLFVFSFIL
LIFNLVTFNFSITQKCVSLFIWLLLFPFYGFFVGLLAGNKINDILFDVQPYLFMLSLI
YLFTLRYTLKVFSCEIFIKIVNAFALYGSLLYISYIILLNFGLLNFNLIYEHLSLTSE
FFFRPDGAFFSKSFYFFGVGAIISFVDKKYLKCLIIVLAILLTESRGVLLFTTLSLLL
ASFKLHKLYLNTIIIILGSVLFIIMLYMVGSRSEDSDSVRFNDLYFYYKNVDLATFLF
GRGFGSFILDRLRIEIVPLEILQKTGVIGVFISLVPMLLIFLKGYFLNSTKTSLMMSL
ILFFSITVSITNPFLFTPMGIFIIGVVVLWVFSIENIQISNNLTSGAK"
gene complement(2112127..2112996)
/gene="rfbG"
/locus_tag="SF2098"
/db_xref="GeneID:1025285"
CDS complement(2112127..2112996)
/gene="rfbG"
/locus_tag="SF2098"
/codon_start=1
/transl_table=11
/product="dTDP-rhamnosyl transferase"
/protein_id="NP_707930.1"
/db_xref="GeneID:1025285"
/translation="MATYNGECWIEEQLKSIIEQKDVDISIFISDDLSTDNTLNICEE
FQLSYPSIINILPSVNKFGGAGKNFYRLIKDVDLENYDYICFSDQDDIWYKDKIKNAI
DCLVFNNANCYSSNVIAYYPSGRKNLVDKAQSQTQFDYFFEAAGPGCTYVIKKETLIE
FKKFIINNKNAAQDICLHDWFLYSFARTRNYSWYIDRKPTMLYRQHENNQVGANISFK
AKYKRLGLVRNKWYRKEVTKIANALADDSFVNNQLGKGYIGNLILALSFWKLRRKKAD
KIYILLMLILNIF"
misc_feature complement(2112355..2112996)
/gene="rfbG"
/locus_tag="SF2098"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:472172"
misc_feature complement(order(2112727..2112729,2112733..2112735,
2112907..2112909,2112985..2112987,2112991..2112993))
/gene="rfbG"
/locus_tag="SF2098"
/note="active site"
/db_xref="CDD:133039"
gene complement(2113025..2113915)
/gene="rfbF"
/locus_tag="SF2099"
/db_xref="GeneID:1026771"
CDS complement(2113025..2113915)
/gene="rfbF"
/locus_tag="SF2099"
/codon_start=1
/transl_table=11
/product="dTDP-rhamnosyl transferase"
/protein_id="NP_707931.1"
/db_xref="GeneID:1026771"
/translation="MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTL
KDKLADIEKVHLICLGRNEGIAKAQNIGIRYSLEKGAEKIIFFDQDSRIRNEFIKKLS
CYMDNENAKIAGPVFIDRDKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTM
VSKEVFEIVGMMDEELFIDYVDTEWCLRCLNYGILVHIIPDIKMVHAIGDKSVKICGI
NIPIHSPVRRYYRVRNAFLLLRKNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKK
HILATLDGIRGITGGGRYNA"
misc_feature complement(2113067..2113888)
/gene="rfbF"
/locus_tag="SF2099"
/note="L-rhamnosyltransferase; Region: rhamnosyltran;
TIGR01556"
/db_xref="CDD:130619"
misc_feature complement(order(2113646..2113648,2113880..2113882,
2113886..2113888))
/gene="rfbF"
/locus_tag="SF2099"
/note="Ligand binding site [active]"
/db_xref="CDD:133017"
gene complement(2113945..2115201)
/gene="rfbE"
/locus_tag="SF2100"
/db_xref="GeneID:1026640"
CDS complement(2113945..2115201)
/gene="rfbE"
/locus_tag="SF2100"
/codon_start=1
/transl_table=11
/product="polysaccharide biosynthesis protein"
/protein_id="NP_707932.1"
/db_xref="GeneID:1026640"
/translation="MSIIKNSVWNLFGYAIPTLIAIPSLGFLARGLGPEGFGVYTIAI
ALVGYAGIFDVGLTRSVIREIAIHRDNHHERTKVISTSTSFLVLFSCFGAFLLLIFSD
GIVNYLKISGVEHSDIQLAFKLLAICIPLFILNQLWSAILEGDEKFGIVNIQKSISSS
CIAGIPAIFVFYSATLSAAVAGLIFARVISILVSAYYVRNDIKISGVHFCYKTFKRLF
FFGGWMTVSNIISPVMVYFDRFIVSNIMGADKVAFYSAPAEVILKLGIIPAAIGRAVF
PRLSNIKDFKEFKRNVNKSLLLMFLICLPVIIIGLLYSGLVLKIWFGENYQINSFNIL
NVLLIGFFFNALAMIPFSAIQALGKSKITALIHCAELVPYLALLYFMVEKYGLLGAAI
SWSIRVILDALLLQWLYTRMCSVYEN"
misc_feature complement(2113975..2115195)
/gene="rfbE"
/locus_tag="SF2100"
/note="Wzx, a subfamily of the multidrug and toxic
compound extrusion (MATE)-like proteins; Region:
MATE_Wzx_like; cd13128"
/db_xref="CDD:240533"
gene complement(2115217..2115762)
/gene="rfbC"
/locus_tag="SF2101"
/db_xref="GeneID:1026775"
CDS complement(2115217..2115762)
/gene="rfbC"
/locus_tag="SF2101"
/note="Code: M; COG: COG1898"
/codon_start=1
/transl_table=11
/product="dTDP-6-deoxy-L-mannose-dehydrogenase"
/protein_id="NP_707933.1"
/db_xref="GeneID:1026775"
/translation="MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVE
FVQDNHSKSTKGVLRGLHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVN
LSAENKRQLWIPEGFAHGFCVLSDEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQ
NPLLSDKDINGQKFVDADYFI"
misc_feature complement(2115232..2115762)
/gene="rfbC"
/locus_tag="SF2101"
/note="dTDP-4-dehydrorhamnose 3,5-epimerase or related
enzyme [Cell wall/membrane/envelope biogenesis]; Region:
RfbC; COG1898"
/db_xref="CDD:441502"
gene complement(2115767..2116645)
/gene="rfbA"
/locus_tag="SF2102"
/db_xref="GeneID:1025289"
CDS complement(2115767..2116645)
/gene="rfbA"
/locus_tag="SF2102"
/note="Code: M; COG: COG1209"
/codon_start=1
/transl_table=11
/product="glucose-1-phosphate thymidylyltransferase"
/protein_id="NP_707934.1"
/db_xref="GeneID:1025289"
/translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL
MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGG
DDCALVLGDNIFYGHDLPKLMDTAVNRESGATVFAYHVNDPERYGVVEFDDNGTAISL
EEKPQEPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMDQGRLSVAMM
GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAHRKGFIDAEQVKVLAEPL
KKNAYGQYLLKMIKGY"
misc_feature complement(2115776..2116633)
/gene="rfbA"
/locus_tag="SF2102"
/note="glucose-1-phosphate thymidylyltransferase, short
form; Region: rmlA; TIGR01207"
/db_xref="CDD:130274"
misc_feature complement(order(2116043..2116045,2116127..2116129,
2116157..2116162,2116205..2116207,2116313..2116315,
2116379..2116390,2116397..2116399,2116610..2116615,
2116619..2116621))
/gene="rfbA"
/locus_tag="SF2102"
/note="substrate binding site [active]"
/db_xref="CDD:133019"
misc_feature complement(order(2115917..2115922,2115929..2115937,
2115944..2115946,2115953..2115958,2115968..2115976,
2116208..2116213,2116223..2116234,2116298..2116303,
2116457..2116459,2116532..2116534,2116541..2116552,
2116556..2116564,2116574..2116579,2116586..2116594,
2116601..2116603))
/gene="rfbA"
/locus_tag="SF2102"
/note="tetramer interface [active]"
/db_xref="CDD:133019"
gene complement(2116704..2117603)
/gene="rfbD"
/locus_tag="SF2103"
/db_xref="GeneID:1025316"
CDS complement(2116704..2117603)
/gene="rfbD"
/locus_tag="SF2103"
/note="Code: M; COG: COG1091"
/codon_start=1
/transl_table=11
/product="dTDP-4-dehydrorhamnose reductase"
/protein_id="NP_707935.1"
/db_xref="GeneID:1025316"
/translation="MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPE
GVAETVKKIRPDVIVNAAAHTAVDKAESEPNFAQLLNATCVEAIAKAANEVGAWVIHY
STDYVFPGNGDTPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGN
NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVAANKPEVAGLYHLVAG
GTTTWHDYAALVFEEARRAGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFA
LVLPDWQVGVKRMLNELFTTTAI"
misc_feature complement(2116707..2117603)
/gene="rfbD"
/locus_tag="SF2103"
/note="dTDP-4-dehydrorhamnose reductase; Provisional;
Region: PRK09987"
/db_xref="CDD:182184"
misc_feature complement(order(2117142..2117153,2117208..2117210,
2117220..2117222,2117292..2117300,2117364..2117366,
2117409..2117411,2117415..2117423,2117481..2117492,
2117511..2117516,2117568..2117579,2117583..2117585))
/gene="rfbD"
/locus_tag="SF2103"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187564"
misc_feature complement(order(2117208..2117210,2117220..2117222,
2117292..2117294,2117361..2117363))
/gene="rfbD"
/locus_tag="SF2103"
/note="active site"
/db_xref="CDD:187564"
misc_feature complement(order(2117052..2117054,2117070..2117072,
2117106..2117108,2117145..2117147,2117220..2117222,
2117292..2117294))
/gene="rfbD"
/locus_tag="SF2103"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187564"
gene complement(2117603..2118688)
/gene="rfbB"
/locus_tag="SF2104"
/db_xref="GeneID:1025931"
CDS complement(2117603..2118688)
/gene="rfbB"
/locus_tag="SF2104"
/note="Code: M; COG: COG1088"
/codon_start=1
/transl_table=11
/product="dTDP-glucose 4,6 dehydratase"
/protein_id="NP_707936.1"
/db_xref="GeneID:1025931"
/translation="MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA
DVSDSERYAFEHADICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIV
GTYVLLEAARNYWSALNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTA
YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG
KALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDL
LDEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWY
LANTNWVENVKSGTYQSWIEQNYEGRQ"
misc_feature complement(2117633..2118688)
/gene="rfbB"
/locus_tag="SF2104"
/note="dTDP-glucose 4,6 dehydratase; Provisional; Region:
PRK10084"
/db_xref="CDD:236649"
misc_feature complement(order(2118098..2118109,2118176..2118178,
2118188..2118190,2118290..2118298,2118392..2118394,
2118437..2118439,2118443..2118451,2118512..2118520,
2118575..2118580,2118584..2118595,2118653..2118664,
2118668..2118670))
/gene="rfbB"
/locus_tag="SF2104"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187557"
misc_feature complement(order(2117777..2117779,2117789..2117791,
2117798..2117800,2117891..2117893,2117996..2117998,
2118002..2118004,2118017..2118025,2118056..2118061,
2118068..2118076,2118101..2118109,2118188..2118190,
2118284..2118292,2118431..2118439))
/gene="rfbB"
/locus_tag="SF2104"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187557"
misc_feature complement(order(2117786..2117788,2118134..2118142,
2118146..2118151,2118158..2118163,2118170..2118175,
2118182..2118184,2118191..2118202,2118206..2118211,
2118215..2118217,2118272..2118274,2118353..2118355,
2118362..2118364,2118374..2118376,2118383..2118388,
2118398..2118400,2118407..2118412,2118419..2118421,
2118425..2118427))
/gene="rfbB"
/locus_tag="SF2104"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187557"
misc_feature complement(order(2118176..2118178,2118188..2118190,
2118290..2118292,2118389..2118391))
/gene="rfbB"
/locus_tag="SF2104"
/note="active site"
/db_xref="CDD:187557"
gene complement(2119061..2119954)
/gene="galF"
/locus_tag="SF2105"
/db_xref="GeneID:1025313"
CDS complement(2119061..2119954)
/gene="galF"
/locus_tag="SF2105"
/note="Code: M; COG: COG1210"
/codon_start=1
/transl_table=11
/product="GalU regulator GalF"
/protein_id="NP_707937.2"
/db_xref="GeneID:1025313"
/translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVIIMNV
RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS
ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
GLRNLKEGAKFRKGIEKLLSE"
misc_feature complement(2119064..2119954)
/gene="galF"
/locus_tag="SF2105"
/note="UTP--glucose-1-phosphate uridylyltransferase GalF;
Region: PRK10122"
/db_xref="CDD:182252"
gene complement(2120129..2121523)
/gene="wcaM"
/locus_tag="SF2106"
/db_xref="GeneID:1025865"
CDS complement(2120129..2121523)
/gene="wcaM"
/locus_tag="SF2106"
/codon_start=1
/transl_table=11
/product="colanic acid biosynthesis protein"
/protein_id="NP_707938.1"
/db_xref="GeneID:1025865"
/translation="MPFKTLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD
WIASFKQAFSEGQTVVVPAGFVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGS
QVTGGEGGGMHNITLDVRGSDCTIKGLAMSGFGPVMQIYIGGKNKRVMRNLTIDNLTV
SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCT
NGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIN
ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF
RVNNIQLDNTHLAYKLRGIQISAGNAVSFVSLTNIEMKRASLELHNKPQHLFMRNINV
MQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNERGQSSVDIDRINHHIV
NVEKINFRLPERRE"
misc_feature complement(2120132..2121523)
/gene="wcaM"
/locus_tag="SF2106"
/note="putative colanic acid biosynthesis protein;
Provisional; Region: wcaM; PRK10123"
/db_xref="CDD:182253"
gene complement(2121534..2122754)
/gene="wcaL"
/locus_tag="SF2107"
/db_xref="GeneID:1027353"
CDS complement(2121534..2122754)
/gene="wcaL"
/locus_tag="SF2107"
/note="Code: M; COG: COG0438"
/codon_start=1
/transl_table=11
/product="colanic acid biosynthesis glycosyltransferase
WcaL"
/protein_id="NP_707939.2"
/db_xref="GeneID:1027353"
/translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTEN
THAAWTKYNLVARTRWLQDEPAGKVAKLRHRASQTLRGIHRKNTWHALNLKRYGAESR
NLILSAICGQVATPFRADVFIAHFGPAGVTAAKLRELGIIRGKIATIFHGIDISSREV
LNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA
PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGLWERRLRTIIEQYQ
LEDVVEMPGFKPSHEVKEMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
LHSGIPELVEADKSGWLLPENDARALAQRLAAFSQLDTDELAPVVKRACEKVEHDFNQ
QVINRELASLLQAL"
misc_feature complement(2121537..2122754)
/gene="wcaL"
/locus_tag="SF2107"
/note="colanic acid biosynthesis glycosyltransferase WcaL;
Region: wcaL; TIGR04005"
/db_xref="CDD:188520"
gene complement(2122751..2124031)
/gene="wcaK"
/locus_tag="SF2108"
/db_xref="GeneID:1025515"
CDS complement(2122751..2124031)
/gene="wcaK"
/locus_tag="SF2108"
/note="Code: S; COG: COG2327"
/codon_start=1
/transl_table=11
/product="colanic acid biosynthesis protein"
/protein_id="NP_707940.1"
/db_xref="GeneID:1025515"
/translation="MKLLILGNHTCGNRGDSAILRGLLDAINILNPHTEVDVMSRYPV
SSSWLLNRPVMGDPLFLQMTQHNSAAGVVGRIKKVLRRRYQHQVLLSRVTDTGKLRNI
AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
FQDEQFNQLANYVFGHCDALILRESVSLDLMKRRNITTAKVEHGVDTAWLVDHHTEDF
TASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQV
IALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT
RLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
LPVLNARFNEAVSRERQTGMQMVQSVLERIGEVK"
misc_feature complement(2122754..2124031)
/gene="wcaK"
/locus_tag="SF2108"
/note="colanic acid biosynthesis pyruvyl transferase WcaK;
Region: wcaK; TIGR04006"
/db_xref="CDD:188521"
gene complement(2124211..2125689)
/gene="wzxC"
/locus_tag="SF2109"
/db_xref="GeneID:1025308"
CDS complement(2124211..2125689)
/gene="wzxC"
/locus_tag="SF2109"
/note="Code: R; COG: COG2244"
/codon_start=1
/transl_table=11
/product="colanic acid exporter"
/protein_id="NP_707941.1"
/db_xref="GeneID:1025308"
/translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGLVVCVAVFLLSDVI
GDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTV
VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYCPGLHFSLASVAPNLRFGAWLTA
DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
DDTEKLRVNFYKLLSIVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCIVG
LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
VQIAAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG"
misc_feature complement(2124214..2125689)
/gene="wzxC"
/locus_tag="SF2109"
/note="MOP flippase family protein; Region: PRK10459"
/db_xref="CDD:236697"
gene complement(2125691..2127085)
/gene="wcaJ"
/locus_tag="SF2110"
/db_xref="GeneID:1026880"
CDS complement(2125691..2127085)
/gene="wcaJ"
/locus_tag="SF2110"
/note="Code: M; COG: COG2148"
/codon_start=1
/transl_table=11
/product="UDP-glucose lipid carrier transferase"
/protein_id="NP_707942.1"
/db_xref="GeneID:1026880"
/translation="MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSF
LYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLPNWTLSVIFSAGLVAFN
NDFDTQLKIWLAWYGLTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLM
ESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGA
RVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRA
EDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVME
NDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYR
QLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIV
FLTVFKGFVNKAAY"
misc_feature complement(2125694..2127082)
/gene="wcaJ"
/locus_tag="SF2110"
/note="putative UDP-glucose lipid carrier transferase;
Provisional; Region: PRK10124"
/db_xref="CDD:182254"
gene complement(2127140..2128510)
/gene="cpsG"
/locus_tag="SF2111"
/db_xref="GeneID:1025871"
CDS complement(2127140..2128510)
/gene="cpsG"
/locus_tag="SF2111"
/note="Code: G; COG: COG1109"
/codon_start=1
/transl_table=11
/product="phosphomannomutase"
/protein_id="NP_707943.2"
/db_xref="GeneID:1025871"
/translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG
GDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
DYNGMKLVREGARTISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF
GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP
NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
KNPGAKIIHDPRLSWNTIDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
FRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLAQPVEAINR
VEQHFSREALAVDRSDGISMTFADWRFNLRTSNTEPVVRLNVESRGDVPLMEARTRTL
LTLLNE"
misc_feature complement(2127143..2128510)
/gene="cpsG"
/locus_tag="SF2111"
/note="phosphomannomutase; Region: PRK15414"
/db_xref="CDD:185312"
misc_feature complement(order(2127233..2127241,2127245..2127247,
2127515..2127517,2127521..2127523,2127527..2127529,
2127578..2127586,2127647..2127649,2127761..2127766,
2127770..2127772,2127776..2127778,2128187..2128189,
2128211..2128219,2128472..2128474,2128481..2128483,
2128487..2128489))
/gene="cpsG"
/locus_tag="SF2111"
/note="active site"
/db_xref="CDD:100091"
misc_feature complement(order(2127233..2127241,2127245..2127247,
2127515..2127517,2127521..2127523,2127527..2127529,
2127578..2127580,2127584..2127586,2127647..2127649,
2127761..2127763,2128217..2128219,2128472..2128474,
2128481..2128483))
/gene="cpsG"
/locus_tag="SF2111"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100091"
misc_feature complement(order(2127764..2127766,2127770..2127772,
2127776..2127778,2128217..2128219))
/gene="cpsG"
/locus_tag="SF2111"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:100091"
gene complement(2128703..2130139)
/gene="cpsB"
/locus_tag="SF2112"
/db_xref="GeneID:1025301"
CDS complement(2128703..2130139)
/gene="cpsB"
/locus_tag="SF2112"
/note="Code: M; COG: COG0836"
/codon_start=1
/transl_table=11
/product="mannose-1-phosphate guanylyltransferase"
/protein_id="NP_707944.1"
/db_xref="GeneID:1025301"
/translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
KRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
IRRGEVSVGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK
KYRPDILDACEKAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMEPTADAVVVPMDAG
WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI
PLDLIEVRSGSYLEEDDVVRFADRYGRV"
misc_feature complement(2128706..2130139)
/gene="cpsB"
/locus_tag="SF2112"
/note="mannose-1-phosphate guanyltransferase; Provisional;
Region: cpsB; PRK15460"
/db_xref="CDD:185357"
misc_feature complement(order(2129783..2129785,2130101..2130103,
2130107..2130109))
/gene="cpsB"
/locus_tag="SF2112"
/note="Substrate binding site [active]"
/db_xref="CDD:133003"
gene complement(2130142..2131365)
/gene="wcaI"
/locus_tag="SF2113"
/db_xref="GeneID:1025903"
CDS complement(2130142..2131365)
/gene="wcaI"
/locus_tag="SF2113"
/note="Code: M; COG: COG0438"
/codon_start=1
/transl_table=11
/product="glycosyl transferase"
/protein_id="NP_707945.1"
/db_xref="GeneID:1025903"
/translation="MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYY
PQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQR
RWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVA
QLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAADNVIFFPNWSEIARFQHVADADV
DALRNQLGLPDNKKIILYSGNIGEKQGLENVIEAADLLRDEPLIFAIVGQGGGKARLE
KMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN
AVITAEAHTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTL
DKENVLRQFINDIRG"
misc_feature complement(2130145..2131365)
/gene="wcaI"
/locus_tag="SF2113"
/note="colanic acid biosynthesis glycosyl transferase
WcaI; Region: wcaI; TIGR04007"
/db_xref="CDD:188522"
gene complement(2131362..2131841)
/gene="wcaH"
/locus_tag="SF2114"
/db_xref="GeneID:1025299"
CDS complement(2131362..2131841)
/gene="wcaH"
/locus_tag="SF2114"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="GDP-mannose mannosyl hydrolase"
/protein_id="NP_707946.2"
/db_xref="GeneID:1025299"
/translation="MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGY
WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHY
VVLGFRFRVAEEELLLPDEQHDDYRWLTPDALLASNDVHANSRAYFLAEKRAGVPGL"
misc_feature complement(2131365..2131841)
/gene="wcaH"
/locus_tag="SF2114"
/note="GDP-mannose mannosyl hydrolase; Region: PRK15434"
/db_xref="CDD:237966"
gene complement(2131841..2132809)
/gene="wcaG"
/locus_tag="SF2115"
/db_xref="GeneID:1025307"
CDS complement(2131841..2132809)
/gene="wcaG"
/locus_tag="SF2115"
/note="Code: MG; COG: COG0451"
/codon_start=1
/transl_table=11
/product="nucleotide di-P-sugar epimerase or dehydratase"
/protein_id="NP_707947.1"
/db_xref="GeneID:1025307"
/translation="MSKQRIFIAGHCGMVGSAIKRQLEQRGDVELVLRTRDELNLLDS
RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL
MFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRT
VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK
PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRGE"
misc_feature complement(2131871..2132797)
/gene="wcaG"
/locus_tag="SF2115"
/note="GDP-fucose synthetase, extended (e) SDRs; Region:
GDP_FS_SDR_e; cd05239"
/db_xref="CDD:187550"
misc_feature complement(order(2132312..2132314,2132318..2132323,
2132390..2132392,2132402..2132404,2132489..2132497,
2132552..2132554,2132612..2132614,2132618..2132626,
2132684..2132695,2132702..2132704,2132765..2132776,
2132780..2132782))
/gene="wcaG"
/locus_tag="SF2115"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187550"
misc_feature complement(order(2132390..2132392,2132402..2132404,
2132489..2132491,2132561..2132563))
/gene="wcaG"
/locus_tag="SF2115"
/note="active site"
/db_xref="CDD:187550"
misc_feature complement(order(2132183..2132185,2132207..2132209,
2132258..2132260,2132315..2132317,2132402..2132404,
2132489..2132491))
/gene="wcaG"
/locus_tag="SF2115"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:187550"
gene complement(2132812..2133933)
/gene="gmd"
/locus_tag="SF2116"
/db_xref="GeneID:1026781"
CDS complement(2132812..2133933)
/gene="gmd"
/locus_tag="SF2116"
/note="Code: M; COG: COG1089"
/codon_start=1
/transl_table=11
/product="GDP-D-mannose dehydratase"
/protein_id="NP_707948.1"
/db_xref="GeneID:1026781"
/translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT
ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF
EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWK
PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES"
misc_feature complement(2132869..2133927)
/gene="gmd"
/locus_tag="SF2116"
/note="GDP-D-mannose dehydratase [Cell
wall/membrane/envelope biogenesis]; Region: Gmd; COG1089"
/db_xref="CDD:440706"
gene complement(2133959..2134507)
/gene="wcaF"
/locus_tag="SF2117"
/db_xref="GeneID:1026791"
CDS complement(2133959..2134507)
/gene="wcaF"
/locus_tag="SF2117"
/note="Code: R; COG: COG0110"
/codon_start=1
/transl_table=11
/product="acyl transferase"
/protein_id="NP_707949.1"
/db_xref="GeneID:1026791"
/translation="MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRA
FLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQ
KSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKS
LPANVVCRGNPAVVIRERVETE"
misc_feature complement(2133968..2134507)
/gene="wcaF"
/locus_tag="SF2117"
/note="colanic acid biosynthesis acetyltransferase WcaF;
Region: WcaF; TIGR04008"
/db_xref="CDD:188523"
misc_feature complement(order(2133998..2134000,2134046..2134048,
2134103..2134105,2134112..2134114,2134118..2134120,
2134169..2134177,2134193..2134195,2134211..2134213,
2134217..2134219,2134247..2134249,2134271..2134273,
2134277..2134279))
/gene="wcaF"
/locus_tag="SF2117"
/note="putative trimer interface [polypeptide binding];
other site"
/db_xref="CDD:100063"
misc_feature complement(order(2133995..2133997,2134001..2134006,
2134031..2134036,2134049..2134054,2134088..2134090,
2134103..2134108,2134112..2134114,2134169..2134171,
2134175..2134177,2134265..2134267,2134271..2134273))
/gene="wcaF"
/locus_tag="SF2117"
/note="putative active site [active]"
/db_xref="CDD:100063"
misc_feature complement(order(2134175..2134177,2134265..2134267,
2134271..2134273))
/gene="wcaF"
/locus_tag="SF2117"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:100063"
misc_feature complement(order(2133983..2133985,2133995..2133997,
2134001..2134006,2134010..2134012,2134031..2134036,
2134049..2134054,2134058..2134060,2134088..2134090,
2134103..2134108,2134112..2134114,2134169..2134171,
2134175..2134177))
/gene="wcaF"
/locus_tag="SF2117"
/note="putative CoA binding site [chemical binding]; other
site"
/db_xref="CDD:100063"
mobile_element 2134648..2135415
/mobile_element_type="insertion sequence:IS1"
gene 2134703..2134978
/gene="insA"
/locus_tag="SF2118"
/db_xref="GeneID:1027351"
CDS 2134703..2134978
/gene="insA"
/locus_tag="SF2118"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707950.1"
/db_xref="GeneID:1027351"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2134724..>2134975
/gene="insA"
/locus_tag="SF2118"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2135005..2135400
/gene="insB"
/locus_tag="SF2119"
/db_xref="GeneID:1025302"
CDS 2135005..2135400
/gene="insB"
/locus_tag="SF2119"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707951.1"
/db_xref="GeneID:1025302"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLKLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 2135008..2135397
/gene="insB"
/locus_tag="SF2119"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2135335..2136309)
/gene="wcaD"
/locus_tag="SF2120"
/pseudo
/db_xref="GeneID:1025305"
misc_feature complement(2135335..2136309)
/gene="wcaD"
/locus_tag="SF2120"
/note="Similar to Escherichia coli K12 colanic acid
polymerase ref: NP_416560.1 (405 aa). BLAST with identity
of 96% in 324 aa. This CDS has been truncated. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(2136212..2137429)
/gene="wcaC"
/locus_tag="SF2121"
/db_xref="GeneID:1026647"
CDS complement(2136212..2137429)
/gene="wcaC"
/locus_tag="SF2121"
/note="Code: M; COG: COG0438"
/codon_start=1
/transl_table=11
/product="glycosyl transferase"
/protein_id="NP_707952.1"
/db_xref="GeneID:1026647"
/translation="MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGK
ESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHV
LHSYWLNLNSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN
NGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHT
FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI
ATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQ
QMLEEYVNFYQNL"
misc_feature complement(2136215..2137429)
/gene="wcaC"
/locus_tag="SF2121"
/note="colanic acid biosynthesis glycosyl transferase
WcaC; Region: WcaC; TIGR04015"
/db_xref="CDD:274919"
gene complement(2137426..2137914)
/gene="wcaB"
/locus_tag="SF2122"
/db_xref="GeneID:1026331"
CDS complement(2137426..2137914)
/gene="wcaB"
/locus_tag="SF2122"
/note="Code: E; COG: COG1045"
/codon_start=1
/transl_table=11
/product="acyl transferase"
/protein_id="NP_707953.2"
/db_xref="GeneID:1026331"
/translation="MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPL
LVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG
ADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKV
IK"
misc_feature complement(2137429..2137866)
/gene="wcaB"
/locus_tag="SF2122"
/note="putative acyl transferase; Provisional; Region:
PRK10191"
/db_xref="CDD:182295"
gene complement(2137917..2138756)
/gene="wcaA"
/locus_tag="SF2123"
/pseudo
/db_xref="GeneID:1025310"
misc_feature complement(2137917..2138756)
/gene="wcaA"
/locus_tag="SF2123"
/note="Similar to Escherichia coli K12 regulator gi:
1788372 (280 aa). BLAST with identity of 96% in 279 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(2138849..2141047)
/locus_tag="SF2124"
/db_xref="GeneID:1025306"
CDS complement(2138849..2141047)
/locus_tag="SF2124"
/note="Code: N; COG: COG3206"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707954.3"
/db_xref="GeneID:1025306"
/translation="MGAGIERRAGIRMTEKVKQHAAPVTGSDEIDIGRLVGTVIEARW
WVIGITVVFALCAVVYTFFATPIYSADALVQIEQNSGNSLVQDIGSALANKPPASDAE
IQLIRSRLVLGKTVDDLDLDIAVSKNTFPIFGAGWDRLMGRQNETVKVTTFNRPKEMA
DQVFTLNVLDDKNYTLSSDGGFSARGQAGQMLKKEGVTLMVEAIHARPGSEFTVTKYS
TLGMINQLQNSLTVTENGKDAGVLSLTYTGEDREQIRDILNSIARNYQEQNIERKSAE
ASKSLAFLAQQLPEVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNE
LTFKEAEISKLYTKVHPAYRTLLEKRQALEEEKAKLNGRVTAMPKNQQEIVRLTRDVE
SGQQVYMQLLNKEQELKITEASTVGDVRIIDPAITQPGVLKPKKGLIILGAIILGLML
SIVGVLLRSLFNRGIESPQVLEEHGISVYASIPLSEWQKARDSVKTIKGVKRYKQSQL
LAVGNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQT
NKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQV
PPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAV
NTLKEVETSLSRFEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK"
misc_feature complement(2138855..2141011)
/locus_tag="SF2124"
/note="tyrosine-protein kinase Wzc; Region: PRK11519"
/db_xref="CDD:183173"
misc_feature complement(order(2138954..2138959,2138966..2138968,
2138978..2138980,2138987..2138992,2138996..2138998,
2139002..2139007,2139041..2139043,2139050..2139055,
2139062..2139073,2139077..2139082,2139149..2139151,
2139158..2139160,2139185..2139187,2139311..2139316,
2139320..2139322,2139404..2139406,2139464..2139472,
2139476..2139481,2139488..2139490))
/locus_tag="SF2124"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:349772"
misc_feature complement(order(2138924..2138926,2139086..2139088,
2139305..2139307,2139320..2139322,2139386..2139403))
/locus_tag="SF2124"
/note="active site"
/db_xref="CDD:349772"
gene complement(2141014..2141457)
/gene="wzb"
/locus_tag="SF2125"
/db_xref="GeneID:1025904"
CDS complement(2141014..2141457)
/gene="wzb"
/locus_tag="SF2125"
/note="Code: T; COG: COG0394"
/codon_start=1
/transl_table=11
/product="tyrosine phosphatase"
/protein_id="NP_707955.1"
/db_xref="GeneID:1025904"
/translation="MFNNILVVCVGNICRSPMAERLLQRYHPELKVESAGLGALVGKG
ADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMDKRHIERLCEMAPEMRGKVM
LFGHWDNECEIPDPYHKSRETFAAVYTLLERSARQWAQALNAEQV"
misc_feature complement(2141017..2141457)
/gene="wzb"
/locus_tag="SF2125"
/note="low molecular weight protein-tyrosine-phosphatase
Wzb; Region: PRK10126"
/db_xref="CDD:182256"
misc_feature complement(order(2141107..2141109,2141113..2141115,
2141410..2141433))
/gene="wzb"
/locus_tag="SF2125"
/note="active site"
/db_xref="CDD:319971"
gene complement(2141463..2142602)
/gene="wza"
/locus_tag="SF2126"
/db_xref="GeneID:1025325"
CDS complement(2141463..2142602)
/gene="wza"
/locus_tag="SF2126"
/note="Code: M; COG: COG1596"
/codon_start=1
/transl_table=11
/product="polysaccharide export protein Wza"
/protein_id="NP_707956.1"
/db_xref="GeneID:1025325"
/translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF
DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE
LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ
VDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN
GREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
TLTEALANAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEF
RLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW"
misc_feature complement(2141466..2142602)
/gene="wza"
/locus_tag="SF2126"
/note="polysaccharide export protein Wza; Provisional;
Region: PRK15078"
/db_xref="CDD:237903"
gene 2143261..2144844
/gene="yegH"
/locus_tag="SF2127"
/db_xref="GeneID:1025078"
CDS 2143261..2144844
/gene="yegH"
/locus_tag="SF2127"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707957.2"
/db_xref="GeneID:1025078"
/translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT
MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAKTASMLVD
HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHT
RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
VQKVQIIPLRKDGEMEYEV"
misc_feature 2143261..2143971
/gene="yegH"
/locus_tag="SF2127"
/note="Tellurite resistance membrane protein TerC
[Inorganic ion transport and metabolism]; Region: TerC;
COG0861"
/db_xref="CDD:440622"
misc_feature 2143693..2144832
/gene="yegH"
/locus_tag="SF2127"
/note="Hemolysin-related protein, contains CBS domains,
UPF0053 family [General function prediction only]; Region:
TlyC; COG1253"
/db_xref="CDD:440865"
gene complement(2145296..2147149)
/gene="asmA"
/locus_tag="SF2128"
/db_xref="GeneID:1027340"
CDS complement(2145296..2147149)
/gene="asmA"
/locus_tag="SF2128"
/note="Code: M; COG: COG2982"
/codon_start=1
/transl_table=11
/product="assembly protein"
/protein_id="NP_707958.1"
/db_xref="GeneID:1027340"
/translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSG
YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK
QVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA
AIEQINWQLQGADLPKQGIQGQGSFQSQWQESHKRLSFNQISLTANDSTLSGQAQVTL
TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGKVSLPGTLD
ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
QAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
LNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM"
misc_feature complement(2145299..2147149)
/gene="asmA"
/locus_tag="SF2128"
/note="putative assembly protein; Provisional; Region:
PRK10833"
/db_xref="CDD:236772"
gene complement(2147171..2147752)
/gene="dcd"
/locus_tag="SF2129"
/db_xref="GeneID:1025350"
CDS complement(2147171..2147752)
/gene="dcd"
/locus_tag="SF2129"
/note="Code: F; COG: COG0717"
/codon_start=1
/transl_table=11
/product="deoxycytidine triphosphate deaminase"
/protein_id="NP_707959.1"
/db_xref="GeneID:1025350"
/translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
misc_feature complement(2147183..2147749)
/gene="dcd"
/locus_tag="SF2129"
/note="deoxycytidine triphosphate deaminase; Region:
dCTP_deam; TIGR02274"
/db_xref="CDD:274062"
misc_feature complement(order(2147282..2147284,2147294..2147296,
2147303..2147317,2147327..2147329,2147333..2147335,
2147339..2147341,2147345..2147347,2147366..2147368,
2147378..2147380,2147393..2147401,2147414..2147431,
2147435..2147437,2147483..2147485,2147489..2147494,
2147507..2147509))
/gene="dcd"
/locus_tag="SF2129"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:143638"
misc_feature complement(order(2147345..2147350,2147360..2147362,
2147369..2147374,2147378..2147380,2147417..2147425))
/gene="dcd"
/locus_tag="SF2129"
/note="active site"
/db_xref="CDD:143638"
gene complement(2147844..2148485)
/gene="udk"
/locus_tag="SF2130"
/db_xref="GeneID:1025324"
CDS complement(2147844..2148485)
/gene="udk"
/locus_tag="SF2130"
/note="Code: F; COG: COG0572"
/codon_start=1
/transl_table=11
/product="uridine/cytidine kinase"
/protein_id="NP_707960.1"
/db_xref="GeneID:1025324"
/translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
PEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTR
MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
misc_feature complement(2147847..2148479)
/gene="udk"
/locus_tag="SF2130"
/note="uridine/cytidine kinase; Provisional; Region:
PRK05480"
/db_xref="CDD:235492"
misc_feature complement(order(2147898..2147900,2148042..2148044,
2148420..2148422))
/gene="udk"
/locus_tag="SF2130"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238981"
misc_feature complement(order(2148039..2148041,2148279..2148281,
2148345..2148347))
/gene="udk"
/locus_tag="SF2130"
/note="Sugar specificity [active]"
/db_xref="CDD:238981"
misc_feature complement(order(2148015..2148017,2148186..2148188,
2148195..2148197,2148201..2148203,2148288..2148290,
2148336..2148338))
/gene="udk"
/locus_tag="SF2130"
/note="Pyrimidine base specificity [active]"
/db_xref="CDD:238981"
gene 2148806..2153562
/gene="yegE"
/locus_tag="SF2131"
/pseudo
/db_xref="GeneID:1026831"
misc_feature 2148806..2153562
/gene="yegE"
/locus_tag="SF2131"
/note="Similar to Escherichia coli K12 sensor-type protein
gi: 1788381 (1106 aa). BLAST with identity of 97% in 1586
aa. This CDS has been disrupted by insertion. The sequence
has been checked and is believed to be correct."
/pseudo
mobile_element 2149216..2150589
/mobile_element_type="insertion sequence:ISSfl2"
gene complement(2149247..2150443)
/locus_tag="SF2132"
/db_xref="GeneID:1025330"
CDS complement(2149247..2150443)
/locus_tag="SF2132"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl2 transposase"
/protein_id="NP_707961.1"
/db_xref="GeneID:1025330"
/translation="MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDE
NKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAG
EAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASSRIR
GLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKR
LAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYP
VLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGN
KALKRALFLSAFTALRDPLSRAYYTRKMSQGKRHNQALIALARRRCDVLFAMMRDGTF
YTPQGS"
misc_feature complement(2149271..2150407)
/locus_tag="SF2132"
/note="IS110 family transposase; Region: transpos_IS110;
NF033542"
/db_xref="CDD:468073"
gene complement(2153672..2154520)
/gene="alkA"
/locus_tag="SF2133"
/db_xref="GeneID:1025319"
CDS complement(2153672..2154520)
/gene="alkA"
/locus_tag="SF2133"
/note="Code: L; COG: COG0122"
/codon_start=1
/transl_table=11
/product="3-methyladenine DNA glycosylase"
/protein_id="NP_707962.1"
/db_xref="GeneID:1025319"
/translation="MYILNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEY
RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGAAR
PGLRLPGSVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQR
LAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRW
TANYFALRGWQAKDVFLPDDYLIKQRFLGMTPAQIRRYAERWKPWRSYALLHIWYTEG
WQPDEA"
misc_feature complement(2153675..2154520)
/gene="alkA"
/locus_tag="SF2133"
/note="3-methyl-adenine DNA glycosylase II; Provisional;
Region: PRK10308"
/db_xref="CDD:236671"
gene 2154591..2156006
/gene="yegD"
/locus_tag="SF2134"
/pseudo
/db_xref="GeneID:1025326"
misc_feature 2154591..2156006
/gene="yegD"
/locus_tag="SF2134"
/note="Similar to Escherichia coli K12 heat shock protein
gi: 1788384 (472 aa). BLAST with identity of 98% in 472
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene complement(2156018..2157958)
/locus_tag="SF2135"
/pseudogene="unknown"
/db_xref="GeneID:1027347"
gene complement(2157955..2158716)
/locus_tag="SF2136"
/db_xref="GeneID:1026677"
CDS complement(2157955..2158716)
/locus_tag="SF2136"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707964.1"
/db_xref="GeneID:1026677"
/translation="MSWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFL
ADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGLNDILATDIVLTVRQRLFAEAEA
KELAVRDFACTFLGLISSANGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFI
TDEDAVSRLETFTSTERVHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQE
QLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP"
misc_feature complement(2158060..2158686)
/locus_tag="SF2136"
/note="Protein phosphatase 2C; Region: PP2C_2; pfam13672"
/db_xref="CDD:404547"
gene complement(2158713..2159372)
/locus_tag="SF2137"
/db_xref="GeneID:1027352"
CDS complement(2158713..2159372)
/locus_tag="SF2137"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707965.2"
/db_xref="GeneID:1027352"
/translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNTGL
VTFRDELLADSLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
ALDMVEERKREYRANGISYYRPWIFLITDGAPIDEWQAAANKVFRGEEDKRFAFFSIG
VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS
V"
misc_feature complement(2158806..2159324)
/locus_tag="SF2137"
/note="VWA subfamily: Von Willebrand factor type A (vWA)
domain was originally found in the blood coagulation
protein von Willebrand factor (vWF). Typically, the vWA
domain is made up of approximately 200 amino acid residues
folded into a classic a/b...; Region: vWA_subfamily;
cd01464"
/db_xref="CDD:238741"
misc_feature complement(order(2158980..2158982,2159091..2159093,
2159280..2159282,2159286..2159288,2159292..2159294))
/locus_tag="SF2137"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:238741"
mobile_element complement(2159660..2161028)
/mobile_element_type="insertion sequence:ISSfl2"
gene 2159806..2161002
/locus_tag="SF2138"
/db_xref="GeneID:1025317"
CDS 2159806..2161002
/locus_tag="SF2138"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl2 transposase"
/protein_id="NP_707966.1"
/db_xref="GeneID:1025317"
/translation="MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDE
NKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAG
EAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIL
GLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKR
LAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYP
VLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGN
KALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQVLIALARRRCDVLFAMMRDGTF
YTPQGS"
misc_feature 2159842..2160978
/locus_tag="SF2138"
/note="IS110 family transposase; Region: transpos_IS110;
NF033542"
/db_xref="CDD:468073"
gene 2161004..2162056
/locus_tag="SF2139"
/db_xref="GeneID:1024632"
CDS 2161004..2162056
/locus_tag="SF2139"
/note="Code: Q; COG: COG0845"
/codon_start=1
/transl_table=11
/product="acriflavin resistance protein AcrA-like protein"
/protein_id="NP_707967.1"
/db_xref="GeneID:1024632"
/translation="MLDNLIGARYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQV
KAGDLLAEIDPSQFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDA
QQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGI
VVITQTHPIDLVFTLPESDIATVVQAQKAGKPLMVEAWDRTNSKKLSEGTLLSLDNQI
DATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVL
NSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTP
EEKATSREYAKKGARS"
misc_feature 2161028..2162053
/locus_tag="SF2139"
/note="MdtA/MuxA family multidrug efflux RND transporter
periplasmic adaptor subunit; Region: PRK11556"
/db_xref="CDD:183194"
gene 2162056..2165178
/gene="yegN"
/locus_tag="SF2140"
/pseudo
/db_xref="GeneID:1026796"
misc_feature 2162056..2165178
/gene="yegN"
/locus_tag="SF2140"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788390 (1041 aa). BLAST with
identity of 98% in 1041 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 2165179..2168244
/gene="yegO"
/locus_tag="SF2141"
/db_xref="GeneID:1025329"
CDS 2165179..2168244
/gene="yegO"
/locus_tag="SF2141"
/note="Code: Q; COG: COG0841"
/codon_start=1
/transl_table=11
/product="multidrug efflux system subunit MdtC"
/protein_id="NP_707968.1"
/db_xref="GeneID:1025329"
/translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV
IMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN
GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST
QLAPTISQIDGVGDVDVGGSSLPAVRVGLTPQALFNQGVSLDDVRTAISNANVRKPQG
ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
EQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAL
TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNISIPKTFFPEQDTGVLMGGIQADQSI
SFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVSSGMMFITLKPRDERSETAQQIID
RLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKKLAT
LPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMN
QYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAAS
TISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAI
ATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVK
KNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGS
ELRQPLEITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
misc_feature 2165179..2168241
/gene="yegO"
/locus_tag="SF2141"
/note="multidrug efflux system subunit MdtC; Provisional;
Region: PRK10614"
/db_xref="CDD:182589"
gene 2168245..2169660
/gene="yegB"
/locus_tag="SF2142"
/db_xref="GeneID:1025321"
CDS 2168245..2169660
/gene="yegB"
/locus_tag="SF2142"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_707969.1"
/db_xref="GeneID:1025321"
/translation="MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESP
LHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELL
LARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY
ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSK
GTGLSPLAIAGLVAVGVVALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIG
SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT
LGLSLVTLLFMTTALLGWYYVLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS
LLSMIMQLSMSIGVTIAGLLLGLFGSQHISVDSGTTQTVFMYTWLSMAFIIALPAFIF
ARVPNDTHQNVAISRRKRSAQ"
misc_feature 2168245..2169657
/gene="yegB"
/locus_tag="SF2142"
/note="putative transporter; Provisional; Region:
PRK10504"
/db_xref="CDD:182502"
gene 2169657..2171060
/gene="baeS"
/locus_tag="SF2143"
/db_xref="GeneID:1027350"
CDS 2169657..2171060
/gene="baeS"
/locus_tag="SF2143"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="signal transduction histidine-protein kinase
BaeS"
/protein_id="NP_707970.1"
/db_xref="GeneID:1027350"
/translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFAD
SAPGVSDDQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
VSITVELPLERDLQREV"
misc_feature 2169657..2171057
/gene="baeS"
/locus_tag="SF2143"
/note="two-component system sensor histidine kinase BaeS;
Region: PRK10549"
/db_xref="CDD:182539"
gene 2171057..2171779
/gene="baeR"
/locus_tag="SF2144"
/db_xref="GeneID:1025332"
CDS 2171057..2171779
/gene="baeR"
/locus_tag="SF2144"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator BaeR"
/protein_id="NP_707971.1"
/db_xref="GeneID:1025332"
/translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
QVLAYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDVPIVMVTAKIEEIDRLLGLEI
GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
LTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
QSFIRAVYGVGYRWEADACRIV"
misc_feature 2171057..2171776
/gene="baeR"
/locus_tag="SF2144"
/note="DNA-binding transcriptional regulator BaeR;
Provisional; Region: PRK10710"
/db_xref="CDD:182665"
gene 2171931..2172302
/locus_tag="SF2145"
/db_xref="GeneID:1027346"
CDS 2171931..2172302
/locus_tag="SF2145"
/note="Code: S; COG: COG3422"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707972.1"
/db_xref="GeneID:1027346"
/translation="MLFSISNFNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSE
LYTSKASAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQS
RETGIASVKANGTSQTVKDNT"
misc_feature 2172000..2172140
/locus_tag="SF2145"
/note="Domain of unknown function (DUF1508); Region:
DUF1508; pfam07411"
/db_xref="CDD:429450"
misc_feature 2172132..2172299
/locus_tag="SF2145"
/note="Uncharacterized conserved protein YegP, UPF0339
family [Function unknown]; Region: YegP; COG3422"
/db_xref="CDD:442648"
gene 2172449..2173810
/gene="yegQ"
/locus_tag="SF2146"
/db_xref="GeneID:1025312"
CDS 2172449..2173810
/gene="yegQ"
/locus_tag="SF2146"
/note="Code: O; COG: COG0826"
/codon_start=1
/transl_table=11
/product="protease"
/protein_id="NP_707973.2"
/db_xref="GeneID:1025312"
/translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
LVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIHNQVPDME
IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM
TPQGNINFTLEHMENAKGEAMPVAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
HGK"
misc_feature 2172449..2173777
/gene="yegQ"
/locus_tag="SF2146"
/note="putative protease; Provisional; Region: PRK15452"
/db_xref="CDD:237969"
gene complement(2174015..2174164)
/locus_tag="SF2147"
/pseudo
/db_xref="GeneID:1025314"
misc_feature complement(2174015..2174164)
/locus_tag="SF2147"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788400 (89 aa). BLAST with
identity of 94% in 49 aa. This CDS has been truncated. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(2174152..2174529)
/locus_tag="SF2148"
/db_xref="GeneID:1025322"
CDS complement(2174152..2174529)
/locus_tag="SF2148"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707974.1"
/db_xref="GeneID:1025322"
/translation="MPLLYLNTRECRWYLMGEGEMKKIAAISLISIFLISGCAVHNDE
TSIGKFGLAYKSNIQRKLDNQYYTEAEASLARGRISGAENIVKNDAAHFCVTQGKKMQ
IVDLKTEGAGLHGVARLTFKCGE"
gene 2174875..2175774
/locus_tag="SF2149"
/db_xref="GeneID:1025346"
CDS 2174875..2175774
/locus_tag="SF2149"
/note="Code: S; COG: COG1597"
/codon_start=1
/transl_table=11
/product="lipid kinase"
/protein_id="NP_707975.1"
/db_xref="GeneID:1025346"
/translation="MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKG
DAARFVEEARKLGVATVIAGGGDGTINEVCTALIQCEGDDIPALGILPLGTANDFATS
VGIPEALDKALKLAIAGNAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALG
GVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALIND
GLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHEITFNLDGEPLSGQ
NFHIEILPAALRCRLPPDCPLLR"
misc_feature 2174878..2175771
/locus_tag="SF2149"
/note="lipid kinase; Reviewed; Region: PRK13054"
/db_xref="CDD:237281"
gene complement(2175856..2176635)
/gene="gatR"
/locus_tag="SF2150"
/db_xref="GeneID:1027339"
CDS complement(2175856..2176635)
/gene="gatR"
/locus_tag="SF2150"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="galactitol utilization operon repressor"
/protein_id="NP_707976.1"
/db_xref="GeneID:1027339"
/translation="MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRF
LEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
VILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMH
GSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKF
NRRGFNQVLPIEKIDIIVTDDAVSEVDKLALQKTRVKLITV"
misc_feature complement(2175859..2176629)
/gene="gatR"
/locus_tag="SF2150"
/note="DNA-binding transcriptional regulator of sugar
metabolism, DeoR/GlpR family [Transcription, Carbohydrate
transport and metabolism]; Region: GlpR; COG1349"
/db_xref="CDD:440960"
gene complement(2176735..2177775)
/gene="gatD"
/locus_tag="SF2151"
/db_xref="GeneID:1027349"
CDS complement(2176735..2177775)
/gene="gatD"
/locus_tag="SF2151"
/note="Code: ER; COG: COG1063"
/codon_start=1
/transl_table=11
/product="galactitol-1-phosphate dehydrogenase"
/protein_id="NP_707977.1"
/db_xref="GeneID:1027349"
/translation="MKSVVNDTDGIVRVAKSVIPEIKHQDEVRVKIASSGLCGSDLPR
IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE
NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAP
QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
RNAMQGKVLLIP"
misc_feature complement(2176744..2177775)
/gene="gatD"
/locus_tag="SF2151"
/note="galactitol-1-phosphate 5-dehydrogenase; Region:
PRK10309"
/db_xref="CDD:182371"
misc_feature complement(order(2176912..2176920,2176996..2177001,
2177059..2177061,2177065..2177070,2177140..2177142,
2177185..2177187,2177197..2177202,2177257..2177274,
2177332..2177334,2177344..2177346,2177647..2177649,
2177656..2177664))
/gene="gatD"
/locus_tag="SF2151"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176198"
misc_feature complement(order(2177344..2177346,2177599..2177601,
2177656..2177658,2177662..2177664))
/gene="gatD"
/locus_tag="SF2151"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176198"
mobile_element complement(2177793..2178560)
/mobile_element_type="insertion sequence:IS1"
gene complement(2177808..2178203)
/gene="insB"
/locus_tag="SF2152"
/db_xref="GeneID:1026800"
CDS complement(2177808..2178203)
/gene="insB"
/locus_tag="SF2152"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707978.1"
/db_xref="GeneID:1026800"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(2177811..2178200)
/gene="insB"
/locus_tag="SF2152"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2178230..2178505)
/gene="insA"
/locus_tag="SF2153"
/db_xref="GeneID:1025338"
CDS complement(2178230..2178505)
/gene="insA"
/locus_tag="SF2153"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707979.1"
/db_xref="GeneID:1025338"
/translation="MASISIRCPSCSATEGVVRNSKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<2178233..2178484)
/gene="insA"
/locus_tag="SF2153"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(2178600..2179955)
/gene="gatC"
/locus_tag="SF2154"
/db_xref="GeneID:1026786"
CDS complement(2178600..2179955)
/gene="gatC"
/locus_tag="SF2154"
/codon_start=1
/transl_table=11
/product="PTS system galactitol-specific transporter
subunit IIC"
/protein_id="NP_707980.1"
/db_xref="GeneID:1026786"
/translation="MFSEVMRYILDLGPTVMLPVVIIIFSKILGMKAGDCFKAGLHIG
IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
AILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKL
GDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKF
GPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRMIKPIMDGLTPIAK
QARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGD
LATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQPAANAGALKAGG
MVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFTKQEKAVLA
E"
misc_feature complement(2178717..2179931)
/gene="gatC"
/locus_tag="SF2154"
/note="PTS system, galactitol-specific IIC component;
Region: EIIC-GAT; TIGR00827"
/db_xref="CDD:129907"
gene complement(2179959..2180243)
/gene="gatB"
/locus_tag="SF2155"
/db_xref="GeneID:1027334"
CDS complement(2179959..2180243)
/gene="gatB"
/locus_tag="SF2155"
/codon_start=1
/transl_table=11
/product="PTS system galactitol-specific transporter
subunit IIB"
/protein_id="NP_707981.1"
/db_xref="GeneID:1027334"
/translation="MKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEI
ETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG"
misc_feature complement(2179962..2180243)
/gene="gatB"
/locus_tag="SF2155"
/note="PTS galactitol transporter subunit IIB; Region:
PRK10310"
/db_xref="CDD:182372"
misc_feature complement(order(2180196..2180204,2180208..2180219))
/gene="gatB"
/locus_tag="SF2155"
/note="P-loop; other site"
/db_xref="CDD:99908"
misc_feature complement(order(2180196..2180201,2180208..2180213,
2180217..2180219))
/gene="gatB"
/locus_tag="SF2155"
/note="active site"
/db_xref="CDD:99908"
misc_feature complement(2180217..2180219)
/gene="gatB"
/locus_tag="SF2155"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:99908"
gene complement(2180274..2180726)
/gene="gatA"
/locus_tag="SF2156"
/db_xref="GeneID:1027354"
CDS complement(2180274..2180726)
/gene="gatA"
/locus_tag="SF2156"
/note="Code: GT; COG: COG1762"
/codon_start=1
/transl_table=11
/product="PTS system galactitol-specific transporter
subunit IIA"
/protein_id="NP_707982.1"
/db_xref="GeneID:1027354"
/translation="MTNLFVRSGISFVDRSEVLTYIGNEMLAKGVVHDTWPQALIARE
AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALI
VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
misc_feature complement(2180277..2180726)
/gene="gatA"
/locus_tag="SF2156"
/note="PTS galactitol transporter subunit IIA; Region:
PRK09665"
/db_xref="CDD:182023"
misc_feature complement(order(2180541..2180543,2180598..2180600))
/gene="gatA"
/locus_tag="SF2156"
/note="active site"
/db_xref="CDD:238129"
misc_feature complement(2180541..2180543)
/gene="gatA"
/locus_tag="SF2156"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238129"
gene complement(2180736..2181998)
/gene="gatZ"
/locus_tag="SF2157"
/db_xref="GeneID:1025323"
CDS complement(2180736..2181998)
/gene="gatZ"
/locus_tag="SF2157"
/codon_start=1
/transl_table=11
/product="D-tagatose-1,6-bisphosphate aldolase subunit
GatZ"
/protein_id="NP_707983.1"
/db_xref="GeneID:1025323"
/translation="MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIE
ATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAA
MEKSVELVKAYVRAGFSKIHLDASMSCAGDTIPLAPETVAERAAVLCFAAESVATDCQ
REQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIA
IVVQPGVEFDHSNIIHYQPQEAQALAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFA
ILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGF
NDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLQGVDIPLGMISQYLPKQFERIQS
GELSAMPHQLIMNKIYDVLRAYRYGCAE"
misc_feature complement(2180739..2181998)
/gene="gatZ"
/locus_tag="SF2157"
/note="tagatose-bisphosphate aldolase subunit GatZ;
Region: PRK15052"
/db_xref="CDD:237889"
gene complement(2182027..2182881)
/gene="gatY"
/locus_tag="SF2158"
/db_xref="GeneID:1027326"
CDS complement(2182027..2182881)
/gene="gatY"
/locus_tag="SF2158"
/note="Code: G; COG: COG0191"
/codon_start=1
/transl_table=11
/product="tagatose-bisphosphate aldolase"
/protein_id="NP_707984.2"
/db_xref="GeneID:1027326"
/translation="MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM
IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEVDALYTNPAQA
REFAEATGIDSLAVAIGTAHGMYASAPVLDFSRLENIRQWVNLPLVLHGASGLSTKDI
QQTIKLGICKINVATELKNAFLQSLKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIA
DCGCEGRA"
misc_feature complement(2182030..2182881)
/gene="gatY"
/locus_tag="SF2158"
/note="tagatose-bisphosphate aldolase; Reviewed; Region:
gatY; PRK09195"
/db_xref="CDD:181690"
misc_feature complement(order(2182141..2182143,2182150..2182152,
2182162..2182164,2182171..2182176,2182180..2182185,
2182456..2182458,2182675..2182680,2182687..2182689,
2182699..2182701,2182711..2182719,2182726..2182728,
2182786..2182788,2182795..2182803))
/gene="gatY"
/locus_tag="SF2158"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:238477"
misc_feature complement(order(2182183..2182188,2182192..2182194,
2182249..2182251,2182255..2182260,2182333..2182335,
2182339..2182347,2182633..2182638))
/gene="gatY"
/locus_tag="SF2158"
/note="active site"
/db_xref="CDD:238477"
misc_feature complement(order(2182258..2182260,2182342..2182344,
2182633..2182635))
/gene="gatY"
/locus_tag="SF2158"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:238477"
misc_feature complement(order(2182249..2182251,2182255..2182257,
2182333..2182335,2182339..2182341,2182345..2182347))
/gene="gatY"
/locus_tag="SF2158"
/note="Na+ binding site [ion binding]; other site"
/db_xref="CDD:238477"
gene complement(2183189..2184241)
/locus_tag="SF2159"
/db_xref="GeneID:1025344"
CDS complement(2183189..2184241)
/locus_tag="SF2159"
/note="Code: G; COG: COG1830"
/codon_start=1
/transl_table=11
/product="fructose-bisphosphate aldolase"
/protein_id="NP_707985.1"
/db_xref="GeneID:1025344"
/translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI
EAGCNCVASTYGVLVSVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
INAVQDVYLDSKITIA"
misc_feature complement(2183192..2184241)
/locus_tag="SF2159"
/note="class I fructose-bisphosphate aldolase; Region:
PRK09250"
/db_xref="CDD:236431"
misc_feature complement(order(2183240..2183248,2183312..2183320,
2183390..2183392,2183483..2183485))
/locus_tag="SF2159"
/note="putative active site; other site"
/db_xref="CDD:188645"
misc_feature complement(2183483..2183485)
/locus_tag="SF2159"
/note="catalytic residue [active]"
/db_xref="CDD:188645"
gene 2184281..2185284
/locus_tag="SF2160"
/pseudo
/db_xref="GeneID:1027337"
misc_feature 2184281..2185284
/locus_tag="SF2160"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788416 (335 aa). BLAST with
identity of 97% in 335 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 2185281..2186246
/locus_tag="SF2161"
/db_xref="GeneID:1025342"
CDS 2185281..2186246
/locus_tag="SF2161"
/note="Code: G; COG: COG0524"
/codon_start=1
/transl_table=11
/product="kinase"
/protein_id="NP_707986.1"
/db_xref="GeneID:1025342"
/translation="MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIE
LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
SDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGNLLYFSGYQLASPCGEL
LVEWLEKLQDVTPFIDFCPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
ITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL
AGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV"
misc_feature 2185332..2186192
/locus_tag="SF2161"
/note="YegV-like sugar kinase. Found only in bacteria,
YegV-like kinase is part of the ribokinase/pfkB sugar
kinase superfamily. Its oligomerization state is unknown
at this time; Region: YegV_kinase_like; cd01944"
/db_xref="CDD:238919"
misc_feature order(2185452..2185454,2186076..2186078,2186085..2186087)
/locus_tag="SF2161"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238919"
misc_feature order(2185884..2185886,2185989..2185991,2186070..2186072,
2186079..2186084,2186091..2186093,2186157..2186159,
2186166..2186168)
/locus_tag="SF2161"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238919"
gene complement(2186220..2188304)
/gene="yegW"
/locus_tag="SF2163"
/pseudo
/db_xref="GeneID:1026684"
misc_feature complement(2186220..2188304)
/gene="yegW"
/locus_tag="SF2163"
/note="Similar to Escherichia coli K12 transcriptional
regulator gi: 1788418 (249 aa). BLAST with identity of 98%
in 694 aa. This CDS has been disrupted by insertion. The
sequence has been checked and is believed to be correct."
/pseudo
mobile_element 2186584..2187912
/mobile_element_type="insertion sequence:iso-IS10R"
gene 2186691..2187899
/locus_tag="SF2162"
/db_xref="GeneID:1027336"
CDS 2186691..2187899
/locus_tag="SF2162"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_707987.1"
/db_xref="GeneID:1027336"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature 2186805..2187860
/locus_tag="SF2162"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene complement(2188352..2189173)
/gene="yegX"
/locus_tag="SF2164"
/db_xref="GeneID:1027297"
CDS complement(2188352..2189173)
/gene="yegX"
/locus_tag="SF2164"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707988.2"
/db_xref="GeneID:1027297"
/translation="MQLRITSRKKLTALLCALGLISIVAIYPRQTVNFFYSTAVQITD
YIHFYGYRPVKSFAIRIPASYTIHGLDVSRWQERIDWQRVAKMRDNDIRLQFAFIKAT
EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVL
DVEERGKLSAKELRKRVSQWLKMVEKRTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTGMSCRHSLMGLKKRLK"
misc_feature complement(2188406..2188972)
/gene="yegX"
/locus_tag="SF2164"
/note="YegX is an uncharacterized bacterial protein with a
glycosyl hydrolase family 25 (GH25) catalytic domain that
is similar in sequence to the CH-type (Chalaropsis-type)
lysozymes of the GH25 family of endolysins; Region:
GH25_YegX-like; cd06524"
/db_xref="CDD:119384"
misc_feature complement(order(2188424..2188426,2188469..2188471,
2188529..2188531,2188589..2188591,2188685..2188687,
2188691..2188693,2188781..2188783,2188787..2188789,
2188874..2188876,2188961..2188963))
/gene="yegX"
/locus_tag="SF2164"
/note="active site"
/db_xref="CDD:119384"
gene complement(2189238..2190038)
/gene="thiD"
/locus_tag="SF2165"
/db_xref="GeneID:1025334"
CDS complement(2189238..2190038)
/gene="thiD"
/locus_tag="SF2165"
/note="Code: H; COG: COG0351"
/codon_start=1
/transl_table=11
/product="bifunctional hydroxy-methylpyrimidine kinase/
hydroxy-phosphomethylpyrimidine kinase"
/protein_id="NP_707989.1"
/db_xref="GeneID:1025334"
/translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
NTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNV
VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
LAALRPRHTNWADTVQEAKIWLSSALAQADTLEVGHGIGPVHHFHAWW"
misc_feature complement(2189241..2190038)
/gene="thiD"
/locus_tag="SF2165"
/note="bifunctional hydroxy-methylpyrimidine kinase/
hydroxy-phosphomethylpyrimidine kinase; Reviewed; Region:
PRK06427"
/db_xref="CDD:180561"
misc_feature complement(order(2189838..2189843,2189853..2189855,
2189862..2189864,2189871..2189876,2189880..2189882,
2189886..2189891,2189904..2189918,2189925..2189927,
2189931..2189948,2189955..2189957,2189964..2189969,
2189976..2189978,2189988..2189990,2189994..2189999,
2190003..2190005,2190024..2190026))
/gene="thiD"
/locus_tag="SF2165"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238574"
misc_feature complement(order(2189400..2189402,2189799..2189801,
2189907..2189909,2189970..2189972,2190006..2190008))
/gene="thiD"
/locus_tag="SF2165"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238574"
misc_feature complement(order(2189403..2189405,2189409..2189411,
2189511..2189513,2189613..2189615,2189724..2189726))
/gene="thiD"
/locus_tag="SF2165"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238574"
gene complement(2190035..2190823)
/gene="thiM"
/locus_tag="SF2166"
/db_xref="GeneID:1023547"
CDS complement(2190035..2190823)
/gene="thiM"
/locus_tag="SF2166"
/note="Code: H; COG: COG2145"
/codon_start=1
/transl_table=11
/product="hydroxyethylthiazole kinase"
/protein_id="NP_707990.1"
/db_xref="GeneID:1023547"
/translation="MQVDLLSSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLAL
GASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTRWTLDPVA
VGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTL
ARETGAIVVVTGEVDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTL
ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
misc_feature complement(2190047..2190781)
/gene="thiM"
/locus_tag="SF2166"
/note="Hydroxyethylthiazole kinase family; Region: HK;
pfam02110"
/db_xref="CDD:396609"
misc_feature complement(order(2190605..2190610,2190614..2190616,
2190674..2190676,2190680..2190682,2190698..2190700,
2190710..2190712,2190728..2190730,2190734..2190736))
/gene="thiM"
/locus_tag="SF2166"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238575"
misc_feature complement(order(2190062..2190064,2190071..2190076,
2190080..2190088,2190092..2190097,2190233..2190244,
2190497..2190502,2190599..2190610,2190644..2190649,
2190656..2190661,2190665..2190676,2190698..2190700,
2190707..2190712,2190716..2190733))
/gene="thiM"
/locus_tag="SF2166"
/note="multimerization interface [polypeptide binding];
other site"
/db_xref="CDD:238575"
misc_feature complement(order(2190221..2190223,2190227..2190229,
2190245..2190247,2190299..2190301,2190305..2190307,
2190311..2190313,2190434..2190436,2190443..2190445,
2190449..2190451,2190527..2190529))
/gene="thiM"
/locus_tag="SF2166"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238575"
gene complement(2191046..2191318)
/gene="yohL"
/locus_tag="SF2167"
/db_xref="GeneID:1025328"
CDS complement(2191046..2191318)
/gene="yohL"
/locus_tag="SF2167"
/note="Code: S; COG: COG1937"
/codon_start=1
/transl_table=11
/product="transcriptional repressor RcnR"
/protein_id="NP_707991.1"
/db_xref="GeneID:1025328"
/translation="MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAA
IRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK"
misc_feature complement(2191049..2191318)
/gene="yohL"
/locus_tag="SF2167"
/note="Ni(II)/Co(II)-binding transcriptional repressor
RcnR; Region: PRK15039"
/db_xref="CDD:184999"
misc_feature complement(order(2191127..2191129,2191139..2191141,
2191214..2191216,2191310..2191312))
/gene="yohL"
/locus_tag="SF2167"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:197388"
misc_feature complement(order(2191061..2191090,2191094..2191099,
2191124..2191126,2191133..2191141,2191145..2191153,
2191157..2191162,2191169..2191174,2191181..2191186,
2191190..2191195,2191199..2191207,2191211..2191219,
2191223..2191234,2191241..2191246,2191250..2191255,
2191262..2191264,2191271..2191276,2191283..2191288,
2191295..2191297))
/gene="yohL"
/locus_tag="SF2167"
/note="putative homotetramer interface [polypeptide
binding]; other site"
/db_xref="CDD:197388"
misc_feature complement(order(2191061..2191072,2191079..2191081,
2191139..2191141,2191151..2191153,2191160..2191162,
2191169..2191174,2191181..2191186,2191190..2191195,
2191199..2191207,2191211..2191219,2191223..2191234,
2191241..2191246,2191250..2191255,2191262..2191264,
2191271..2191276,2191283..2191288,2191295..2191297))
/gene="yohL"
/locus_tag="SF2167"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:197388"
misc_feature complement(order(2191073..2191078,2191082..2191090,
2191094..2191099,2191124..2191129,2191133..2191138,
2191145..2191150,2191157..2191159))
/gene="yohL"
/locus_tag="SF2167"
/note="putative homodimer-homodimer interface [polypeptide
binding]; other site"
/db_xref="CDD:197388"
misc_feature complement(order(2191079..2191081,2191139..2191141))
/gene="yohL"
/locus_tag="SF2167"
/note="putative allosteric switch controlling residues;
other site"
/db_xref="CDD:197388"
gene 2191440..2192270
/gene="yohM"
/locus_tag="SF2168"
/pseudo
/db_xref="GeneID:1025341"
misc_feature 2191440..2192270
/gene="yohM"
/locus_tag="SF2168"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788423 (275 aa). BLAST with
identity of 98% in 277 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 2192489..2192827
/gene="yohN"
/locus_tag="SF2169"
/db_xref="GeneID:1025340"
CDS 2192489..2192827
/gene="yohN"
/locus_tag="SF2169"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_707992.1"
/db_xref="GeneID:1025340"
/translation="MTIKNKMLLGVLLLVTSAAWAAPATAGSTNTSGISKYELSSFIA
DFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIK
AYDGEIFYHR"
misc_feature <2192621..2192809
/gene="yohN"
/locus_tag="SF2169"
/note="Periplasmic regulator RcnB of Ni and Co efflux
[Inorganic ion transport and metabolism]; Region: RcnB;
COG5455"
/db_xref="CDD:444206"
gene complement(2193127..2193942)
/gene="yehA"
/locus_tag="SF2170"
/db_xref="GeneID:1027344"
CDS complement(2193127..2193942)
/gene="yehA"
/locus_tag="SF2170"
/codon_start=1
/transl_table=11
/product="type-1 fimbrial protein"
/protein_id="NP_707993.1"
/db_xref="GeneID:1027344"
/translation="MEIRIMLFILMMMVMPVSYAACYSELSVQHNLVVQGNFALTQTQ
IATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQSS
FTSGYSVTVTPAASNAKVNISAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG
KSWGACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKQDDLLITLDSIPVLQLPATGN
KATINSKKRDIILRCKNLLGQQNQTSRKMQVYLSSSDLLTNSNTILKGAEDNA"
misc_feature complement(<2193130..2193942)
/gene="yehA"
/locus_tag="SF2170"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
gene complement(2193958..2196438)
/gene="yehB"
/locus_tag="SF2171"
/db_xref="GeneID:1025335"
CDS complement(2193958..2196438)
/gene="yehB"
/locus_tag="SF2171"
/note="Code: N; COG: COG3188"
/codon_start=1
/transl_table=11
/product="fimbrial outer membrane usher protein"
/protein_id="NP_707994.2"
/db_xref="GeneID:1025335"
/translation="MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANI
RLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGK
QCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
SQYYSDYKASGNNKSTYVRFNSGLNLLEWQLHSDASFSKTNNNPGVWKSNTLYLERGF
AQFLGTLRVGDMYTSSDIFDSVRFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVT
IEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQ
PGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGW
NTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRT
FNDHVWANNKDNYRRDENDIYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLW
RDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYGENHHEEKRFNIFISIPCDWGDDV
TTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANL
TWNAPVATVNGSYSQSSTYRQTGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDA
YVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDSEAELRGNRKIAAPYRGAVVL
VNFDTDQRKPWFIKALRADGQPLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEIPPSVN
VAIDKQQGLSCTITFGKEIDESRNYICQ"
misc_feature complement(2193961..2196438)
/gene="yehB"
/locus_tag="SF2171"
/note="fimbrial outer membrane usher protein; Provisional;
Region: PRK15217"
/db_xref="CDD:185139"
misc_feature complement(2196454..2197950)
/note="Similar to Escherichia coli K12 chaperone gi:
1788428 (240 aa). BLAST with identity of 97% in 498 aa.
This CDS has been disrupted by insertion. The sequence has
been checked and is believed to be correct."
mobile_element 2196891..2197654
/mobile_element_type="insertion sequence:IS1"
gene 2197136..2197639
/gene="insB"
/locus_tag="SF2173"
/db_xref="GeneID:1025345"
CDS 2197136..2197639
/gene="insB"
/locus_tag="SF2173"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707996.2"
/db_xref="GeneID:1025345"
/translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD
EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 2197244..2197636
/gene="insB"
/locus_tag="SF2173"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2197985..2198509)
/gene="yehD"
/locus_tag="SF2175"
/db_xref="GeneID:1027325"
CDS complement(2197985..2198509)
/gene="yehD"
/locus_tag="SF2175"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="fimbrial-like protein"
/protein_id="NP_707997.1"
/db_xref="GeneID:1027325"
/translation="MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFE
AGGDSVSINMPTVPTTVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDK
ITGNDKAIASSNDTVGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQS
GDVLSSLVMRVAQD"
misc_feature complement(2197988..2198509)
/gene="yehD"
/locus_tag="SF2175"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
mobile_element complement(2198770..2199537)
/mobile_element_type="insertion sequence:IS1"
gene complement(2198785..2199180)
/gene="insB"
/locus_tag="SF2176"
/db_xref="GeneID:1027338"
CDS complement(2198785..2199180)
/gene="insB"
/locus_tag="SF2176"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_707998.1"
/db_xref="GeneID:1027338"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(2198788..2199177)
/gene="insB"
/locus_tag="SF2176"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2199207..2199482)
/gene="insA"
/locus_tag="SF2177"
/db_xref="GeneID:1025337"
CDS complement(2199207..2199482)
/gene="insA"
/locus_tag="SF2177"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_707999.1"
/db_xref="GeneID:1025337"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<2199210..2199461)
/gene="insA"
/locus_tag="SF2177"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(2199579..2199860)
/locus_tag="SF2177a"
/db_xref="GeneID:16608341"
CDS complement(2199579..2199860)
/locus_tag="SF2177a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439264.1"
/db_xref="GeneID:16608341"
/translation="MNKYWLSGIIFLAYGLASPAVSSETATLTINGRISPPTCSMAMV
NSQPQQHCGQLTYNVDTRHQVSSPVKGVTTEVVVAGSDSKRRIVLNRYD"
misc_feature complement(2199582..2199860)
/locus_tag="SF2177a"
/note="Protein of unknown function (DUF2574); Region:
DUF2574; pfam10836"
/db_xref="CDD:287772"
gene complement(2200122..2201231)
/gene="mrp"
/locus_tag="SF2178"
/db_xref="GeneID:1027323"
CDS complement(2200122..2201231)
/gene="mrp"
/locus_tag="SF2178"
/note="Code: D; COG: COG0489"
/codon_start=1
/transl_table=11
/product="antiporter inner membrane protein"
/protein_id="NP_708000.2"
/db_xref="GeneID:1027323"
/translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMAGKALMQMLQETLWPDLDY
LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
misc_feature complement(2200125..2201231)
/gene="mrp"
/locus_tag="SF2178"
/note="iron-sulfur cluster carrier protein ApbC; Region:
PRK11670"
/db_xref="CDD:183270"
gene 2201363..2203396
/gene="metG"
/locus_tag="SF2179"
/db_xref="GeneID:1025333"
CDS 2201363..2203396
/gene="metG"
/locus_tag="SF2179"
/note="Code: J; COG: COG0143"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA synthetase"
/protein_id="NP_708001.2"
/db_xref="GeneID:1025333"
/translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKM
SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
LASRNAGFINKRFDGVLASELADPELYKTFTDAAEVIGEAWESREFGKAVREIMALAD
LANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
TELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAPVTGPLADDP
IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
misc_feature 2201378..2203393
/gene="metG"
/locus_tag="SF2179"
/note="methionyl-tRNA synthetase; Reviewed; Region: metG;
PRK00133"
/db_xref="CDD:234655"
misc_feature 2203537..2206403
/note="'Similar to Escherichia coli K12 molybdate
metabolism regulator, first fragment gi: 1788433 (275 aa).
BLAST with identity of 98% in 956 aa. This CDS has been
disrupted by insertion. The sequence has been checked and
is believed to be correct.'"
mobile_element 2203728..2204991
/mobile_element_type="insertion sequence:IS600"
gene 2203792..2204094
/locus_tag="SF2181"
/db_xref="GeneID:1027327"
CDS 2203792..2204094
/locus_tag="SF2181"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_708002.1"
/db_xref="GeneID:1027327"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 2203792..2204064
/locus_tag="SF2181"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2204130..2204948
/locus_tag="SF2182"
/db_xref="GeneID:1027321"
CDS 2204130..2204948
/locus_tag="SF2182"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_708003.1"
/db_xref="GeneID:1027321"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVGHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELMLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA"
misc_feature <2204130..2204921
/locus_tag="SF2182"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
mobile_element 2205551..2206318
/mobile_element_type="insertion sequence:IS1"
gene 2205606..2205881
/gene="insA"
/locus_tag="SF2183"
/db_xref="GeneID:1025352"
CDS 2205606..2205881
/gene="insA"
/locus_tag="SF2183"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708004.1"
/db_xref="GeneID:1025352"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHLRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2205627..>2205878
/gene="insA"
/locus_tag="SF2183"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2205908..2206303
/gene="insB"
/locus_tag="SF2184"
/db_xref="GeneID:1025348"
CDS 2205908..2206303
/gene="insB"
/locus_tag="SF2184"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708005.1"
/db_xref="GeneID:1025348"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 2205911..2206300
/gene="insB"
/locus_tag="SF2184"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 2206517..2208460
/gene="molR_2"
/locus_tag="SF2185"
/pseudo
/db_xref="GeneID:1023846"
misc_feature 2206517..2208460
/gene="molR_2"
/locus_tag="SF2185"
/note="'Similar to Escherichia coli K12 molybdate
metabolism regulator, second fragment 2 gi: 1788434 (646
aa). BLAST with identity of 96% in 648 aa. This CDS
contains an in-frame stop codon. The sequence has been
checked and is believed to be correct.'"
/pseudo
gene 2209383..2213029
/gene="yehI"
/locus_tag="SF2186"
/pseudo
/db_xref="GeneID:1027328"
misc_feature 2209383..2213029
/gene="yehI"
/locus_tag="SF2186"
/note="Similar to Escherichia coli K12 regulator ref:
NP_416621.1 (1210 aa). BLAST with identity of 81% in 1215
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene 2213090..2213497
/locus_tag="SF2187"
/db_xref="GeneID:1025358"
CDS 2213090..2213497
/locus_tag="SF2187"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708006.1"
/db_xref="GeneID:1025358"
/translation="MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLER
FRLRPTFHQRDREDVDPLINDALIYIRDEFIDEQKLRGESPEPVIVIFNCKLQNIFNQ
QIELYTLDNSSRSTCNLKYDEYSFIKGGNGIPP"
gene 2213973..2215127
/gene="yehL"
/locus_tag="SF2188"
/db_xref="GeneID:1027315"
CDS 2213973..2215127
/gene="yehL"
/locus_tag="SF2188"
/note="Code: R; COG: COG0714"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708007.2"
/db_xref="GeneID:1027315"
/translation="MRQTFIARKISFISLIHFRDEYMSPQNNHLQRPPAAVLYADELA
KLKQNDNAPCPPGWQLSLPAARAFILGDSAQNISRKVVISPSAVERMLVTLATGRGLM
LVGEPGTAKSLLSELLATSISGDAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEAL
VPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSDRVMTVPELTGEASQLYAREGF
NIIATANTRDRGVNEMSAALKRRFDFETVFPIMDFAQELELVASASARLLAHSGIPHK
VPDAVLELLVRTFRDLRANGEKKTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGE
PADLVDCIAGTIVKDNEEDRARLRRYFEQRVATHKEAHWQAYYQARHRLP"
misc_feature 2214270..2214698
/gene="yehL"
/locus_tag="SF2188"
/note="AAA domain (dynein-related subfamily); Region:
AAA_5; pfam07728"
/db_xref="CDD:400191"
misc_feature 2214285..2214308
/gene="yehL"
/locus_tag="SF2188"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(2214288..2214311,2214504..2214506,2214645..2214647)
/gene="yehL"
/locus_tag="SF2188"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 2214492..2214509
/gene="yehL"
/locus_tag="SF2188"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 2214693..2214695
/gene="yehL"
/locus_tag="SF2188"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 2215138..2217417
/gene="yehM"
/locus_tag="SF2189"
/db_xref="GeneID:1026712"
CDS 2215138..2217417
/gene="yehM"
/locus_tag="SF2189"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708008.2"
/db_xref="GeneID:1026712"
/translation="MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRV
DELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQADRRIQAQTYFIDL
PCWAQSEEEDDSPDTQEESQTLLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFA
QLRGDSPGDALNRQREAFMARWIGWAMQQNNGDVLVVCGGWHAPALAKMWRECPQVIN
TPELPSLADAVTGCYLTPYSEKRLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKT
VLTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPL
PWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAE
LTLNRFNPNGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAAL
IEAACFGATLLEAARHKLEADMLDAGGIGSITTCLSQAASAGLASFSQQLLEQLTLLI
AQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCAAIDRTLWLCESNGRPDEK
EFHAHLHSWQALCHILRDLHSGVQLPGVSLSAAVALLERHSQAIHVLALDRGATLGAL
MRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLS
DADFTNALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHH
QQLEQQALASLQHWGVFHV"
misc_feature 2215195..2217285
/gene="yehM"
/locus_tag="SF2189"
/note="Family of unknown function (DUF5682); Region:
DUF5682; pfam18934"
/db_xref="CDD:436841"
gene 2217410..2218546
/gene="yehP"
/locus_tag="SF2190"
/db_xref="GeneID:1027345"
CDS 2217410..2218546
/gene="yehP"
/locus_tag="SF2190"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708009.2"
/db_xref="GeneID:1027345"
/translation="MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEW
LYGRDPERLQRGERSSGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVV
TNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFS
GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIEFPRFNSRIKRQSEQWQLV
LLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQ
LGGGTNIASAMEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGL
AALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS"
misc_feature <2217554..>2217874
/gene="yehP"
/locus_tag="SF2190"
/note="beta-3-deoxy-D-manno-oct-2-ulosonic acid
(Kdo)-transferase; Region: beta_Kdo_transferase; cl25364"
/db_xref="CDD:474571"
misc_feature 2217860..2218525
/gene="yehP"
/locus_tag="SF2190"
/note="VWA domain containing CoxE-like protein; Region:
VWA_CoxE; pfam05762"
/db_xref="CDD:399053"
misc_feature order(2218073..2218075,2218079..2218081,2218085..2218087,
2218250..2218252,2218328..2218330)
/gene="yehP"
/locus_tag="SF2190"
/note="metal ion-dependent adhesion site (MIDAS); other
site"
/db_xref="CDD:238739"
gene 2218543..2220546
/gene="yehQ"
/locus_tag="SF2191"
/db_xref="GeneID:1025347"
CDS 2218543..2220546
/gene="yehQ"
/locus_tag="SF2191"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708010.2"
/db_xref="GeneID:1025347"
/translation="MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN
SALIATFSDGVRTQLANGQALKEAQCTYGASGMCRHRVMLVLSYQRLCATAQPTGKEE
EWDPAIWLEELATLPDATRKRAQALVAKSITIELFCAPGEIPSARLPMSDVRFYSRSS
IRFARCDCIEGTLCEHVVLAVQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEG
KTCRQYVQQLSQALWLSGISQPLIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDA
FHARASHYHAGECLRQLAALNSRLNCAQEMARSDSVGEVPPVPWRTVVGSGIAGEAKL
DHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQEDSPAATRRLFSF
QAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALR
EYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNLLTLSL
PASASAPYAIERMAALLQQTDDPVCLVSGFVSFVDGQLTLEPQVMMTKTRAWALDAET
APVVVSLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAINQAELLANDLTA
VGFYRLAHVLAQFRNTESEARVEAMNNGVLLCEQLFPMLQQQG"
misc_feature 2218564..2219919
/gene="yehQ"
/locus_tag="SF2191"
/note="Uncharacterized protein, contains SWIM-type Zn
finger domain [Function unknown]; Region: SWIM; COG4715"
/db_xref="CDD:443750"
mobile_element complement(2220644..2221401)
/mobile_element_type="insertion sequence:IS1"
gene complement(2220679..2221152)
/gene="insB"
/locus_tag="SF2192"
/db_xref="GeneID:1025356"
CDS complement(2220679..2221152)
/gene="insB"
/locus_tag="SF2192"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708011.1"
/db_xref="GeneID:1025356"
/translation="MSRQCTHYGRWPQHGFTSLKKLTPQSVTSRIQPGTDVIVCAEMD
EHWGYFCAKKRQRWLVDTYDKIRRTDVDHVFGERTLATLERLLSLLSAFEVAVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHSGII"
misc_feature complement(2220682..2221044)
/gene="insB"
/locus_tag="SF2192"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 2221437..2221898
/gene="yehR"
/locus_tag="SF2193"
/db_xref="GeneID:1025357"
CDS 2221437..2221898
/gene="yehR"
/locus_tag="SF2193"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708012.2"
/db_xref="GeneID:1025357"
/translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT
YVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKSTYTDTYA
QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK"
misc_feature 2221437..2221895
/gene="yehR"
/locus_tag="SF2193"
/note="Uncharacterized lipoprotein YehR, DUF1307 family
[Function unknown]; Region: YehR; COG4808"
/db_xref="CDD:443836"
mobile_element complement(2222104..2222871)
/mobile_element_type="insertion sequence:IS1"
gene complement(2222119..2222514)
/gene="insB"
/locus_tag="SF2194"
/db_xref="GeneID:1027333"
CDS complement(2222119..2222514)
/gene="insB"
/locus_tag="SF2194"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708013.1"
/db_xref="GeneID:1027333"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(2222122..2222511)
/gene="insB"
/locus_tag="SF2194"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2222541..2222816)
/gene="insA"
/locus_tag="SF2195"
/db_xref="GeneID:1027329"
CDS complement(2222541..2222816)
/gene="insA"
/locus_tag="SF2195"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708014.1"
/db_xref="GeneID:1027329"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<2222544..2222795)
/gene="insA"
/locus_tag="SF2195"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(2222850..2223242)
/gene="yehS"
/locus_tag="SF2196"
/db_xref="GeneID:1025368"
CDS complement(2222850..2223242)
/gene="yehS"
/locus_tag="SF2196"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708015.1"
/db_xref="GeneID:1025368"
/translation="MACKRLLKWLFASSTPEGLMISNDILRSVRYILKANNNDLVRIL
ALDNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERR
INNNIVLKKLRIAFSLKTDDILVMLPTY"
misc_feature complement(<2222862..2223185)
/gene="yehS"
/locus_tag="SF2196"
/note="Uncharacterized conserved protein YehS, DUF1456
family [Function unknown]; Region: YehS; COG4807"
/db_xref="CDD:443835"
gene complement(2223232..2223951)
/gene="yehT"
/locus_tag="SF2197"
/db_xref="GeneID:1027504"
CDS complement(2223232..2223951)
/gene="yehT"
/locus_tag="SF2197"
/note="Code: T; COG: COG3279"
/codon_start=1
/transl_table=11
/product="two-component response-regulatory protein YehT"
/protein_id="NP_708016.2"
/db_xref="GeneID:1027504"
/translation="MIKVLIVDDEPLARENLRIFLQEQSDIEIVGECSNAVEGIGAVH
KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
NGLTVPVSRRYLKSLKEAIGL"
misc_feature complement(2223235..2223951)
/gene="yehT"
/locus_tag="SF2197"
/note="two-component system response regulator BtsR;
Region: PRK11697"
/db_xref="CDD:236956"
gene complement(2223948..2225633)
/gene="yehU"
/locus_tag="SF2198"
/db_xref="GeneID:1027301"
CDS complement(2223948..2225633)
/gene="yehU"
/locus_tag="SF2198"
/note="Code: T; COG: COG3275"
/codon_start=1
/transl_table=11
/product="2-component sensor protein"
/protein_id="NP_708017.2"
/db_xref="GeneID:1027301"
/translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST
YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA"
misc_feature complement(2225046..2225555)
/gene="yehU"
/locus_tag="SF2198"
/note="5TMR of 5TMR-LYT; Region: 5TM-5TMR_LYT; pfam07694"
/db_xref="CDD:429599"
misc_feature complement(2224575..2224988)
/gene="yehU"
/locus_tag="SF2198"
/note="GAF domain; Region: GAF_2; pfam13185"
/db_xref="CDD:433019"
misc_feature complement(2223954..>2224631)
/gene="yehU"
/locus_tag="SF2198"
/note="Sensor histidine kinase, LytS/YehU family [Signal
transduction mechanisms]; Region: LytS; COG3275"
/db_xref="CDD:442506"
mobile_element 2225774..2227200
/mobile_element_type="insertion sequence:IS4"
gene 2225841..2227186
/locus_tag="SF2199"
/pseudo
/db_xref="GeneID:1025409"
misc_feature 2225841..2227186
/locus_tag="SF2199"
/note="Similar to Shigella flexneri conserved hypothetical
protein ref: NP_085397.1 (448 aa). BLAST with identity of
77% in 448 aa. This CDS contains an in-frame stop codon.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 2227584..2227832
/locus_tag="SF2200"
/db_xref="GeneID:1025354"
CDS 2227584..2227832
/locus_tag="SF2200"
/codon_start=1
/transl_table=11
/product="DNA-damage-inducible protein"
/protein_id="NP_708018.1"
/db_xref="GeneID:1025354"
/translation="MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKA
TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
misc_feature 2227629..2227823
/locus_tag="SF2200"
/note="DinI-like family; Region: DinI; cl11630"
/db_xref="CDD:448327"
gene complement(2227948..2228217)
/locus_tag="SF2200a"
/db_xref="GeneID:16608342"
CDS complement(2227948..2228217)
/locus_tag="SF2200a"
/codon_start=1
/transl_table=11
/product="tail fiber assembly protein"
/protein_id="YP_008439265.1"
/db_xref="GeneID:16608342"
/translation="MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQGFSEHIAPLQD
AVDLEIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPEEPDTM"
misc_feature complement(2227957..>2228124)
/locus_tag="SF2200a"
/note="Caudovirales tail fibre assembly protein, lambda
gpK; Region: Caudo_TAP; cl17077"
/db_xref="CDD:450149"
gene 2228274..2228942
/locus_tag="SF2201"
/db_xref="GeneID:1025349"
CDS 2228274..2228942
/locus_tag="SF2201"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708019.1"
/db_xref="GeneID:1025349"
/translation="MVKLMKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEH
LLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHK
ISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATI
LGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSA
SGKK"
misc_feature 2228445..2228738
/locus_tag="SF2201"
/note="Methyltransferase domain; Region: Methyltransf_12;
pfam08242"
/db_xref="CDD:400515"
gene 2229258..2232239
/gene="ipaH_6"
/locus_tag="SF2202"
/pseudo
/db_xref="GeneID:1027313"
misc_feature 2229258..2232239
/gene="ipaH_6"
/locus_tag="SF2202"
/note="Similar to Shigella flexneri IpaH9.8 gb: AAC23714.1
(545 aa). BLAST with identity of 77% in 994 aa. This CDS
has been disrupted by insertion. The sequence has been
checked and is believed to be correct."
/pseudo
mobile_element 2229871..2231199
/mobile_element_type="insertion sequence:iso-IS10R"
gene 2229978..2231186
/locus_tag="SF2203"
/db_xref="GeneID:1027324"
CDS 2229978..2231186
/locus_tag="SF2203"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_708020.1"
/db_xref="GeneID:1027324"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature 2230092..2231147
/locus_tag="SF2203"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene complement(2232419..2232928)
/locus_tag="SF2204"
/db_xref="GeneID:1025355"
CDS complement(2232419..2232928)
/locus_tag="SF2204"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_708021.3"
/db_xref="GeneID:1025355"
/translation="MTFFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFT
VTPEMLEAAREARRQEIEAWRTEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSV
TAQTHMAWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQREMKEELSGLDDL
ASIRAFDVE"
misc_feature complement(2232434..2232757)
/locus_tag="SF2204"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
gene complement(2232973..2234262)
/locus_tag="SF2205"
/db_xref="GeneID:1025343"
CDS complement(2232973..2234262)
/locus_tag="SF2205"
/codon_start=1
/transl_table=11
/product="tail fiber protein"
/protein_id="NP_708022.2"
/db_xref="GeneID:1025343"
/translation="MSVVISGALTDGAGIPMSGYHIILKSRVNTPEVVMNTVADVMAG
NDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDV
VKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAAGYARAAEQAKNDIDAALTGTLKTAN
HLSETAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPED
VIRFDTKSDFLAWVRNALPGEYSVAGPYGIIIPDTRFEGVLSIRWTDARPETTEPRYR
AKSLTFYGINGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRWGDPDIG
GLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIVSPQFFITGCSE
HSLPGSYCALSGVPDAHVSGAMPGLFIRTSRGMHRGN"
misc_feature complement(2233873..2234262)
/locus_tag="SF2205"
/note="Peptidase associated domain: C-terminal domain of
M14 N/E carboxypeptidase; putative folding, regulation, or
interaction domain; Region: Peptidase_M14NE-CP-C_like;
cl21470"
/db_xref="CDD:473874"
gene complement(2234286..2234774)
/locus_tag="SF2206"
/db_xref="GeneID:1025397"
CDS complement(2234286..2234774)
/locus_tag="SF2206"
/codon_start=1
/transl_table=11
/product="tail fiber assembly protein"
/protein_id="NP_708023.1"
/db_xref="GeneID:1025397"
/translation="MTKRYSVTWLFSEDGKNWYEELKNFASDTIKIAYTGDGRVVWVG
KDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVS
ARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKSSYNAIEWPASPEG
SS"
misc_feature complement(2234298..2234717)
/locus_tag="SF2206"
/note="Caudovirales tail fibre assembly protein, lambda
gpK; Region: Caudo_TAP; pfam02413"
/db_xref="CDD:426761"
mobile_element 2235234..2236001
/mobile_element_type="insertion sequence:IS1"
gene 2235289..2235564
/gene="insA"
/locus_tag="SF2208"
/db_xref="GeneID:1027330"
CDS 2235289..2235564
/gene="insA"
/locus_tag="SF2208"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708025.1"
/db_xref="GeneID:1027330"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2235310..>2235561
/gene="insA"
/locus_tag="SF2208"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2235591..2235986
/gene="insB"
/locus_tag="SF2209"
/db_xref="GeneID:1025351"
CDS 2235591..2235986
/gene="insB"
/locus_tag="SF2209"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708026.1"
/db_xref="GeneID:1025351"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKAIGHYLNIKHYQ"
misc_feature 2235594..2235983
/gene="insB"
/locus_tag="SF2209"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
misc_feature 2236396..2238392
/note="Similar to Escherichia coli K12 transcriptional
regulator gi: 1788448 (244 aa). BLAST with identity of 98%
in 666 aa. This CDS has been disrupted by insertion. The
sequence has been checked and is believed to be correct."
mobile_element 2236631..2237936
/mobile_element_type="insertion sequence:IS629"
gene 2236685..2237011
/locus_tag="SF2211"
/db_xref="GeneID:1025386"
CDS 2236685..2237011
/locus_tag="SF2211"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_708027.1"
/db_xref="GeneID:1025386"
/translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
ETLRVWGRQHERDTGGGDGGLTTAERQRLKEPERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature 2236688..2236975
/locus_tag="SF2211"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2237011..2237894
/locus_tag="SF2212"
/pseudogene="unknown"
/db_xref="GeneID:1025393"
gene complement(2238540..2239271)
/gene="yehW"
/locus_tag="SF2213"
/db_xref="GeneID:1025365"
CDS complement(2238540..2239271)
/gene="yehW"
/locus_tag="SF2213"
/note="Code: E; COG: COG1174"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_708029.1"
/db_xref="GeneID:1025365"
/translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE
SFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
LAIAVPVIGFGLQPAIIALILYGVLPILQVTLAGLGAIDPSVTEVAKGMGMSRGQRLR
KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
LVALAAIIADRLFERLVQALSQHAK"
misc_feature complement(2238555..2239148)
/gene="yehW"
/locus_tag="SF2213"
/note="ABC-type proline/glycine betaine transport system,
permease component [Amino acid transport and metabolism];
Region: OpuBB; COG1174"
/db_xref="CDD:440787"
gene complement(2239276..2240202)
/gene="yehX"
/locus_tag="SF2214"
/db_xref="GeneID:1027306"
CDS complement(2239276..2240202)
/gene="yehX"
/locus_tag="SF2214"
/note="Code: E; COG: COG1125"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_708030.1"
/db_xref="GeneID:1027306"
/translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
KMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
PLTMLTRPANDFVRQFFGRSELGVHLLSLRSVADYVRREERAEGEALAEEMTLRDALS
LFVARGCEVLPVVNTQGQPCGTLHFQDLLVEA"
misc_feature complement(2239288..2240202)
/gene="yehX"
/locus_tag="SF2214"
/note="ABC-type proline/glycine betaine transport system,
ATPase component [Amino acid transport and metabolism];
Region: OpuBA; COG1125"
/db_xref="CDD:440742"
gene complement(2240195..2241352)
/gene="yehY"
/locus_tag="SF2215"
/db_xref="GeneID:1027311"
CDS complement(2240195..2241352)
/gene="yehY"
/locus_tag="SF2215"
/note="Code: E; COG: COG1174"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_708031.2"
/db_xref="GeneID:1027311"
/translation="MTYLRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGLHLWQL
WPQTIWMLVGVGCAWLTACFVPAKKGSIFALILAQFVFVLLVWGAGKAATQLAQNGSA
LARTSLGRGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL
SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV
IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG
AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND"
misc_feature complement(2240204..2240875)
/gene="yehY"
/locus_tag="SF2215"
/note="ABC-type proline/glycine betaine transport system,
permease component [Amino acid transport and metabolism];
Region: OpuBB; COG1174"
/db_xref="CDD:440787"
gene complement(2241359..2242276)
/gene="yehZ"
/locus_tag="SF2216"
/db_xref="GeneID:1027309"
CDS complement(2241359..2242276)
/gene="yehZ"
/locus_tag="SF2216"
/note="Code: M; COG: COG1732"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_708032.1"
/db_xref="GeneID:1027309"
/translation="MPLLKLWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNII
LQVLESHGVPTVNKVQLGTTPVGRGAITSDELDIYPEYTGNGAFFFKDENDAAWKNAG
QGYEKVKKLDAEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTF
KLAASAEFIERADALPTFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMA
YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTL
QQLNASIAVEGLDAKKVAADYLKQKGWAK"
misc_feature complement(2241380..2242201)
/gene="yehZ"
/locus_tag="SF2216"
/note="Substrate-binding domain OsmF of an osmoregulated
ABC-type transporter; the type 2 periplasmic-binding
protein fold; Region: PBP2_OsmF; cd13616"
/db_xref="CDD:270334"
misc_feature complement(order(2241548..2241550,2241620..2241622,
2241887..2241889,2241893..2241895,2242022..2242024,
2242031..2242036,2242175..2242177,2242181..2242183))
/gene="yehZ"
/locus_tag="SF2216"
/note="putative chemical substrate binding site [chemical
binding]; other site"
/db_xref="CDD:270334"
gene complement(2242528..2244825)
/gene="bglX"
/locus_tag="SF2217"
/db_xref="GeneID:1027317"
CDS complement(2242528..2244825)
/gene="bglX"
/locus_tag="SF2217"
/note="Code: G; COG: COG1472"
/codon_start=1
/transl_table=11
/product="beta-D-glucoside glucohydrolase"
/protein_id="NP_708033.1"
/db_xref="GeneID:1027317"
/translation="MKWLCSVGIAVSLVLQPALADDLFGNHPLTPEARDAFVTDLLKK
MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
VSRDPRWGRASEGFGEDTYLTSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS
GKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR
ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNSV
GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAV
VGEAQGMAHEASSRTDITIPQGQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
ILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNADKP
NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKRE
GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
AEPGKFNVFIGTDSARVKKGEFELL"
misc_feature complement(2242531..2244825)
/gene="bglX"
/locus_tag="SF2217"
/note="beta-glucosidase BglX; Region: PRK15098"
/db_xref="CDD:185053"
gene 2245021..2246736
/gene="dld"
/locus_tag="SF2218"
/db_xref="GeneID:1026718"
CDS 2245021..2246736
/gene="dld"
/locus_tag="SF2218"
/note="Code: C; COG: COG0277"
/codon_start=1
/transl_table=11
/product="D-lactate dehydrogenase"
/protein_id="NP_708034.1"
/db_xref="GeneID:1026718"
/translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
DALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTL
RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
GSLVQRGPAYTEMSLFARIDEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
EVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
WQEVE"
misc_feature 2245042..2246727
/gene="dld"
/locus_tag="SF2218"
/note="D-lactate dehydrogenase; Provisional; Region:
PRK11183"
/db_xref="CDD:236872"
gene complement(2246774..2247706)
/gene="pbpG"
/locus_tag="SF2219"
/db_xref="GeneID:1025374"
CDS complement(2246774..2247706)
/gene="pbpG"
/locus_tag="SF2219"
/note="Code: M; COG: COG1686"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein 7"
/protein_id="NP_708035.3"
/db_xref="GeneID:1025374"
/translation="MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAM
IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH
LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
misc_feature complement(2246831..2247700)
/gene="pbpG"
/locus_tag="SF2219"
/note="D-alanyl-D-alanine endopeptidase; Provisional;
Region: pbpG; PRK11669"
/db_xref="CDD:236952"
gene complement(2247880..2248467)
/gene="yohC"
/locus_tag="SF2220"
/db_xref="GeneID:1025380"
CDS complement(2247880..2248467)
/gene="yohC"
/locus_tag="SF2220"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708036.2"
/db_xref="GeneID:1025380"
/translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA
FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
EGLSFSSSTLAIGVLVLEVLLTLTVILWGYGYRLF"
misc_feature complement(2247952..2248455)
/gene="yohC"
/locus_tag="SF2220"
/note="Yip1 domain; Region: Yip1; pfam04893"
/db_xref="CDD:461468"
gene 2248601..2249215
/gene="yohD"
/locus_tag="SF2221"
/db_xref="GeneID:1027303"
CDS 2248601..2249215
/gene="yohD"
/locus_tag="SF2221"
/note="Code: S; COG: COG0586"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708037.1"
/db_xref="GeneID:1027303"
/translation="MLTGNQRETNWPMDLNTLISQYGYAALVIGSLAEGETVTLLGGV
AAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQR
HPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQV
IAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDNQA"
misc_feature 2248643..2249110
/gene="yohD"
/locus_tag="SF2221"
/note="Membrane integrity protein DedA, putative
transporter, DedA/Tvp38 family [Cell
wall/membrane/envelope biogenesis]; Region: DedA; COG0586"
/db_xref="CDD:440351"
gene complement(2249332..2250093)
/gene="yohF"
/locus_tag="SF2222"
/pseudo
/db_xref="GeneID:1026567"
misc_feature complement(2249332..2250093)
/gene="yohF"
/locus_tag="SF2222"
/note="Similar to Escherichia coli K12 oxidoreductase gi:
1788459 (254 aa). BLAST with identity of 95% in 253 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(2250146..2251582)
/locus_tag="SF2223"
/pseudogene="unknown"
/db_xref="GeneID:1027320"
gene complement(2252260..2253207)
/gene="yohI"
/locus_tag="SF2225"
/db_xref="GeneID:1025384"
CDS complement(2252260..2253207)
/gene="yohI"
/locus_tag="SF2225"
/note="Code: R; COG: COG0042"
/codon_start=1
/transl_table=11
/product="tRNA-dihydrouridine synthase C"
/protein_id="NP_708040.2"
/db_xref="GeneID:1025384"
/translation="MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVK
VFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGFWGVDLNCGCPSKT
VNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA
GATELVVHGRTKEQGYRAEHIDWQAIGEIRQRLNIPVIANGEIWDWQSAQQCMAISGC
DAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQW
LSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL"
misc_feature complement(2252272..2253207)
/gene="yohI"
/locus_tag="SF2225"
/note="tRNA dihydrouridine(16) synthase DusC; Region:
PRK10550"
/db_xref="CDD:236713"
misc_feature complement(order(2252533..2252538,2252602..2252604,
2252608..2252610,2252704..2252706,2252791..2252793,
2252923..2252925,2253004..2253006,2253109..2253111,
2253184..2253192))
/gene="yohI"
/locus_tag="SF2225"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:239200"
misc_feature complement(order(2252533..2252535,2252602..2252607,
2252695..2252700,2252704..2252709,2252785..2252787,
2252791..2252793,2252911..2252916,2253004..2253006))
/gene="yohI"
/locus_tag="SF2225"
/note="active site"
/db_xref="CDD:239200"
misc_feature complement(order(2252698..2252700,2252704..2252706,
2252785..2252787,2252914..2252916))
/gene="yohI"
/locus_tag="SF2225"
/note="catalytic residues [active]"
/db_xref="CDD:239200"
misc_feature complement(order(2252602..2252607,2252695..2252697,
2252707..2252709,2252791..2252793,2252911..2252913))
/gene="yohI"
/locus_tag="SF2225"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:239200"
gene 2253446..2253844
/gene="yohJ"
/locus_tag="SF2226"
/db_xref="GeneID:1025425"
CDS 2253446..2253844
/gene="yohJ"
/locus_tag="SF2226"
/note="Code: R; COG: COG1380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708041.2"
/db_xref="GeneID:1025425"
/translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML
ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
misc_feature 2253446..2253841
/gene="yohJ"
/locus_tag="SF2226"
/note="hypothetical protein; Provisional; Region:
PRK01821"
/db_xref="CDD:234983"
gene 2253841..2254536
/gene="yohK"
/locus_tag="SF2227"
/db_xref="GeneID:1027293"
CDS 2253841..2254536
/gene="yohK"
/locus_tag="SF2227"
/note="Code: M; COG: COG1346"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708042.1"
/db_xref="GeneID:1027293"
/translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
LMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
APFLFPIILAVMG"
misc_feature 2253841..2254533
/gene="yohK"
/locus_tag="SF2227"
/note="hypothetical protein; Provisional; Region:
PRK10711"
/db_xref="CDD:182666"
gene 2254666..2255550
/gene="cdd"
/locus_tag="SF2228"
/db_xref="GeneID:1025385"
CDS 2254666..2255550
/gene="cdd"
/locus_tag="SF2228"
/note="Code: F; COG: COG0295"
/codon_start=1
/transl_table=11
/product="cytidine deaminase"
/protein_id="NP_708043.1"
/db_xref="GeneID:1025385"
/translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT
SATLKALGCHSIDRVLLA"
misc_feature 2254666..2255547
/gene="cdd"
/locus_tag="SF2228"
/note="cytidine deaminase; Provisional; Region: PRK09027"
/db_xref="CDD:181614"
gene 2255700..2256419
/gene="sanA"
/locus_tag="SF2229"
/db_xref="GeneID:1026730"
CDS 2255700..2256419
/gene="sanA"
/locus_tag="SF2229"
/note="Code: S; COG: COG2949"
/codon_start=1
/transl_table=11
/product="vancomycin high temperature exclusion protein"
/protein_id="NP_708044.2"
/db_xref="GeneID:1026730"
/translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM
RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
AQGYPAVTPEQLLELQKKQGK"
misc_feature 2255700..2256416
/gene="sanA"
/locus_tag="SF2229"
/note="outer membrane permeability protein SanA; Region:
PRK10834"
/db_xref="CDD:182765"
misc_feature order(2256072..2256074,2256081..2256083,2256132..2256134,
2256144..2256146,2256153..2256155,2256243..2256245)
/gene="sanA"
/locus_tag="SF2229"
/note="putative active site [active]"
/db_xref="CDD:99750"
gene 2256422..2256661
/locus_tag="SF2230"
/db_xref="GeneID:1025372"
CDS 2256422..2256661
/locus_tag="SF2230"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708045.1"
/db_xref="GeneID:1025372"
/translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR"
misc_feature 2256422..2256658
/locus_tag="SF2230"
/note="Protein of unknown function (DUF2542); Region:
DUF2542; pfam10808"
/db_xref="CDD:151258"
gene 2256855..2258093
/locus_tag="SF2231"
/db_xref="GeneID:1025360"
CDS 2256855..2258093
/locus_tag="SF2231"
/note="Code: ER; COG: COG0493"
/codon_start=1
/transl_table=11
/product="dihydropyrimidine dehydrogenase subunit A"
/protein_id="NP_708046.1"
/db_xref="GeneID:1025360"
/translation="MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQ
RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPG
GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVG
LSSGSGLPLFEHSDVEIAVDFLQRVRQAQGDISIPQSALIIGGGDVAMDVASTLKVLG
CQAVTCVAREELDEFPASEKEFASARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELT
MAADKIILAVGQHARLDAFAELEQQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAV
KTGKEAAEAIHHYLEGACSC"
misc_feature 2256861..2258090
/locus_tag="SF2231"
/note="dihydropyrimidine dehydrogenase subunit A;
Provisional; Region: PRK11749"
/db_xref="CDD:236967"
gene 2258081..2259266
/gene="yeiA"
/locus_tag="SF2232"
/pseudo
/db_xref="GeneID:1025359"
misc_feature 2258081..2259266
/gene="yeiA"
/locus_tag="SF2232"
/note="Similar to Escherichia coli K12 oxidoreductase gi:
1788469 (414 aa). BLAST with identity of 98% in 395 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene complement(2259302..2260312)
/gene="mglC"
/locus_tag="SF2233"
/db_xref="GeneID:1025415"
CDS complement(2259302..2260312)
/gene="mglC"
/locus_tag="SF2233"
/note="Code: G; COG: COG1172"
/codon_start=1
/transl_table=11
/product="methyl-galactoside ABC transporter permease"
/protein_id="NP_708047.1"
/db_xref="GeneID:1025415"
/translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
AAKISGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG
VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYAR
KK"
misc_feature complement(2259305..2260312)
/gene="mglC"
/locus_tag="SF2233"
/note="galactose/methyl galactoside ABC transporter
permease MglC; Region: mglC; PRK09478"
/db_xref="CDD:181892"
misc_feature complement(2259605..2259661)
/gene="mglC"
/locus_tag="SF2233"
/note="TM-ABC transporter signature motif [active]"
/db_xref="CDD:119321"
gene complement(2260328..2261848)
/gene="mglA"
/locus_tag="SF2234"
/db_xref="GeneID:1027318"
CDS complement(2260328..2261848)
/gene="mglA"
/locus_tag="SF2234"
/note="Code: G; COG: COG1129"
/codon_start=1
/transl_table=11
/product="galactose/methyl galaxtoside transporter
ATP-binding protein"
/protein_id="NP_708048.1"
/db_xref="GeneID:1027318"
/translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ
RSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANE
AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDS
MRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA
ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
misc_feature complement(2260331..2261803)
/gene="mglA"
/locus_tag="SF2234"
/note="galactose/methyl galaxtoside transporter
ATP-binding protein; Provisional; Region: PRK10982"
/db_xref="CDD:182880"
gene complement(2261909..2262907)
/gene="mglB"
/locus_tag="SF2235"
/db_xref="GeneID:1027319"
CDS complement(2261909..2262907)
/gene="mglB"
/locus_tag="SF2235"
/note="Code: G; COG: COG1879"
/codon_start=1
/transl_table=11
/product="methyl-galactoside ABC transporter
substrate-binding protein MglB"
/protein_id="NP_708049.1"
/db_xref="GeneID:1027319"
/translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
DGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
misc_feature complement(2261915..2262904)
/gene="mglB"
/locus_tag="SF2235"
/note="galactose/glucose ABC transporter substrate-binding
protein MglB; Region: PRK15395"
/db_xref="CDD:185293"
misc_feature complement(order(2262071..2262073,2262131..2262133,
2262206..2262208,2262290..2262292,2262365..2262367,
2262377..2262379,2262563..2262568,2262641..2262643,
2262788..2262793))
/gene="mglB"
/locus_tag="SF2235"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:380481"
misc_feature complement(order(2262224..2262226,2262413..2262415,
2262425..2262427,2262431..2262433,2262437..2262439))
/gene="mglB"
/locus_tag="SF2235"
/note="Ca binding site [ion binding]; other site"
/db_xref="CDD:380481"
gene complement(2263187..2264227)
/gene="galS"
/locus_tag="SF2236"
/db_xref="GeneID:1027298"
CDS complement(2263187..2264227)
/gene="galS"
/locus_tag="SF2236"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator GalS"
/protein_id="NP_708050.2"
/db_xref="GeneID:1027298"
/translation="MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELD
YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
KERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDN
LSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGT
PDMPGGEAAMVELLGRNLQLTAVFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP
IARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQN
AAAITNSTNQAM"
misc_feature complement(2263190..2264227)
/gene="galS"
/locus_tag="SF2236"
/note="HTH-type transcriptional regulator GalS; Region:
PRK10401"
/db_xref="CDD:236681"
gene complement(2264369..2265445)
/gene="yeiB"
/locus_tag="SF2237"
/db_xref="GeneID:1027253"
CDS complement(2264369..2265445)
/gene="yeiB"
/locus_tag="SF2237"
/note="Code: R; COG: COG2311"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708051.1"
/db_xref="GeneID:1027253"
/translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYDAITP
QDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF
WDGDILLAYGLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRA
DGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTIN
LPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIAC
VGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQ
GPVEWLWRQLTLRAAGPAISKTSR"
misc_feature complement(2264390..2265427)
/gene="yeiB"
/locus_tag="SF2237"
/note="hypothetical protein; Provisional; Region:
PRK10835"
/db_xref="CDD:182766"
gene complement(2265462..2266130)
/gene="folE"
/locus_tag="SF2238"
/db_xref="GeneID:1025439"
CDS complement(2265462..2266130)
/gene="folE"
/locus_tag="SF2238"
/note="Code: H; COG: COG0302"
/codon_start=1
/transl_table=11
/product="GTP cyclohydrolase I"
/protein_id="NP_708052.1"
/db_xref="GeneID:1025439"
/translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
RHHN"
misc_feature complement(order(2265492..2265500,2265504..2265506,
2265513..2265518,2265531..2265539,2265543..2265551,
2265555..2265560,2265573..2265578,2265585..2265593,
2265630..2265632,2265660..2265662,2265669..2265671,
2265675..2265683,2265711..2265713,2265720..2265728,
2265738..2265740,2265744..2265749,2265768..2265770,
2265774..2265776,2265780..2265785,2265792..2265797,
2265807..2265809,2265813..2265815,2265819..2265830,
2265834..2265845,2265858..2265860,2265864..2265866,
2265894..2265896,2265909..2265911,2265921..2265923,
2265933..2265935,2265939..2265944,2265948..2265956,
2265960..2265962,2265966..2265968,2265972..2265974,
2265978..2265983,2265990..2265992,2266002..2266004,
2266011..2266016,2266023..2266028))
/gene="folE"
/locus_tag="SF2238"
/note="homodecamer interface [polypeptide binding]; other
site"
/db_xref="CDD:238349"
misc_feature complement(2265471..2266013)
/gene="folE"
/locus_tag="SF2238"
/note="Tunnelling fold (T-fold). The five known T-folds
are found in five different enzymes with different
functions: dihydroneopterin-triphosphate epimerase
(DHNTPE), dihydroneopterin aldolase (DHNA), GTP
cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold;
cl00263"
/db_xref="CDD:469697"
misc_feature complement(order(2265573..2265575,2265585..2265587,
2265591..2265593,2265672..2265680,2265711..2265713,
2265723..2265728,2265732..2265734,2265789..2265794,
2265798..2265800,2265924..2265926,2265933..2265935))
/gene="folE"
/locus_tag="SF2238"
/note="active site"
/db_xref="CDD:238349"
misc_feature complement(order(2265585..2265587,2265591..2265593,
2265789..2265794,2265798..2265800))
/gene="folE"
/locus_tag="SF2238"
/note="putative catalytic site residues [active]"
/db_xref="CDD:238349"
misc_feature complement(order(2265585..2265587,2265789..2265794,
2265798..2265800))
/gene="folE"
/locus_tag="SF2238"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:238349"
misc_feature complement(order(2265504..2265518,2265522..2265530,
2265615..2265617,2265621..2265623,2265639..2265641,
2265648..2265650))
/gene="folE"
/locus_tag="SF2238"
/note="GTP-CH-I/GFRP interaction surface [active]"
/db_xref="CDD:238349"
gene 2266388..2267226
/gene="yeiG"
/locus_tag="SF2239"
/pseudo
/db_xref="GeneID:1025423"
misc_feature 2266388..2267226
/gene="yeiG"
/locus_tag="SF2239"
/note="Similar to Escherichia coli K12 esterase gi:
1788477 (279 aa). BLAST with identity of 98% in 280 aa.
This CDS ontains frameshift. The sequence has been checked
and is believed to be correct."
/pseudo
gene complement(2267258..2269249)
/gene="cirA"
/locus_tag="SF2240"
/pseudo
/db_xref="GeneID:1027304"
misc_feature complement(2267258..2269249)
/gene="cirA"
/locus_tag="SF2240"
/note="Similar to Escherichia coli K12 outer membrane
receptor for iron-regulated colicin I receptor; porin;
requires tonB gene product gi: 1788478 (664 aa). BLAST
with identity of 99% in 663 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene complement(2269541..2271010)
/gene="lysP"
/locus_tag="SF2241"
/db_xref="GeneID:1027273"
CDS complement(2269541..2271010)
/gene="lysP"
/locus_tag="SF2241"
/note="Code: E; COG: COG0833"
/codon_start=1
/transl_table=11
/product="lysine transporter"
/protein_id="NP_708053.1"
/db_xref="GeneID:1027273"
/translation="MGSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS
QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF
QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
misc_feature complement(2269544..2271010)
/gene="lysP"
/locus_tag="SF2241"
/note="lysine transporter; Provisional; Region: PRK10836"
/db_xref="CDD:182767"
gene complement(2271216..2272097)
/gene="yeiE"
/locus_tag="SF2242"
/db_xref="GeneID:1025434"
CDS complement(2271216..2272097)
/gene="yeiE"
/locus_tag="SF2242"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator"
/protein_id="NP_708054.2"
/db_xref="GeneID:1025434"
/translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ
LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY
ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE
DELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTRDIVDYLLLSHLPKFEMAMEL
GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS
NALRRFLDYCDPANVPR"
misc_feature complement(2271228..2272097)
/gene="yeiE"
/locus_tag="SF2242"
/note="putative DNA-binding transcriptional regulator;
Provisional; Region: PRK10837"
/db_xref="CDD:182768"
gene 2272196..2273245
/gene="yeiH"
/locus_tag="SF2243"
/db_xref="GeneID:1025420"
CDS 2272196..2273245
/gene="yeiH"
/locus_tag="SF2243"
/note="Code: S; COG: COG2855"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708055.1"
/db_xref="GeneID:1025420"
/translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAI
FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
VGGGAINYVIQSVIA"
misc_feature 2272235..2273239
/gene="yeiH"
/locus_tag="SF2243"
/note="conserved hypothetical integral membrane protein;
Region: TIGR00698"
/db_xref="CDD:129781"
gene 2273319..2274176
/gene="nfo"
/locus_tag="SF2244"
/db_xref="GeneID:1025424"
CDS 2273319..2274176
/gene="nfo"
/locus_tag="SF2244"
/note="Code: L; COG: COG0648"
/codon_start=1
/transl_table=11
/product="endonuclease IV"
/protein_id="NP_708056.1"
/db_xref="GeneID:1025424"
/translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQNDRFDGIPLILETINPDIWAEEIAWLK
AQQTEKAVA"
misc_feature 2273319..2274164
/gene="nfo"
/locus_tag="SF2244"
/note="endonuclease IV; Provisional; Region: PRK01060"
/db_xref="CDD:179214"
misc_feature order(2273337..2273339,2273412..2273414,2273532..2273534,
2274099..2274101,2274120..2274122)
/gene="nfo"
/locus_tag="SF2244"
/note="AP (apurinic/apyrimidinic) site pocket [active]"
/db_xref="CDD:237986"
misc_feature order(2273421..2273435,2273532..2273537,2273541..2273543,
2273550..2273552)
/gene="nfo"
/locus_tag="SF2244"
/note="DNA interaction; other site"
/db_xref="CDD:237986"
misc_feature order(2273523..2273525,2273643..2273645,2273751..2273753,
2273853..2273855,2273862..2273864,2273964..2273966,
2274003..2274005,2274009..2274011,2274099..2274101)
/gene="nfo"
/locus_tag="SF2244"
/note="Metal-binding active site; metal-binding site"
/db_xref="CDD:237986"
gene 2274179..2275267
/gene="yeiI"
/locus_tag="SF2245"
/db_xref="GeneID:1026564"
CDS 2274179..2275267
/gene="yeiI"
/locus_tag="SF2245"
/note="Code: G; COG: COG0524"
/codon_start=1
/transl_table=11
/product="kinase"
/protein_id="NP_708057.1"
/db_xref="GeneID:1026564"
/translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK
GRIKDKGYILTEQEYCVVVGTINMDIRGMADIHYPQAASHPGTIHCSAGGVGRNIAHN
LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT
VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDT
VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNAAVNALHQQGVQQLFVY
LPDESVYCSEKDGEQFLLTVPAHTTVDSFGADDGFMAGLVYSFLEGNNFRDSARFAMA
CAAISRASGSLNNPTLSADNALSLVPMV"
misc_feature 2274179..2275264
/gene="yeiI"
/locus_tag="SF2245"
/note="sugar kinase; Region: PRK09954"
/db_xref="CDD:182165"
gene complement(2275323..2276573)
/gene="yeiJ"
/locus_tag="SF2246"
/db_xref="GeneID:1027296"
CDS complement(2275323..2276573)
/gene="yeiJ"
/locus_tag="SF2246"
/note="Code: F; COG: COG1972"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_708058.1"
/db_xref="GeneID:1027296"
/translation="MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGG
IMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL
PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
LLSPATESSQVSFNNLSFTETPPKSIIEADATGAMTGLKIAAGVATVVMAFVAIIALI
NGIIGGVGGWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVA
YLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGL
RALAAATLSNLMSATIAGFFIGLA"
misc_feature complement(2275332..2276573)
/gene="yeiJ"
/locus_tag="SF2246"
/note="Nucleoside permease NupC [Nucleotide transport and
metabolism]; Region: NupC; COG1972"
/db_xref="CDD:441575"
gene complement(2276673..2277614)
/gene="rihB"
/locus_tag="SF2247"
/db_xref="GeneID:1027307"
CDS complement(2276673..2277614)
/gene="rihB"
/locus_tag="SF2247"
/note="Code: F; COG: COG1957"
/codon_start=1
/transl_table=11
/product="ribonucleoside hydrolase 2"
/protein_id="NP_708059.1"
/db_xref="GeneID:1027307"
/translation="MEKRKIILDCEPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLD
KTLINGLNVCQKLEINVPVYAGMPQPIMRKQIVADNIHGETGLDGPVFEPLTRQAEST
HAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT
PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERVGGPAGELFSD
IMNFTLKTQFEYYGLAGGPVHDATCIGYLINPDGIKTQDMYVEVDVNSGPCYGRTVCD
ELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH"
misc_feature complement(2276676..2277614)
/gene="rihB"
/locus_tag="SF2247"
/note="ribosylpyrimidine nucleosidase; Region: rihB;
PRK09955"
/db_xref="CDD:182166"
misc_feature complement(order(2276895..2276897,2277117..2277119,
2277123..2277125,2277141..2277143,2277243..2277245,
2277372..2277374,2277495..2277497,2277567..2277572,
2277582..2277584))
/gene="rihB"
/locus_tag="SF2247"
/note="active site"
/db_xref="CDD:239117"
misc_feature complement(order(2276808..2276810,2276817..2276822,
2276826..2276828,2277087..2277089,2277210..2277212,
2277402..2277404))
/gene="rihB"
/locus_tag="SF2247"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:239117"
gene 2277784..2278362
/gene="yeiL"
/locus_tag="SF2248"
/db_xref="GeneID:1025404"
CDS 2277784..2278362
/gene="yeiL"
/locus_tag="SF2248"
/note="Code: T; COG: COG0664"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator YeiL"
/protein_id="NP_708060.2"
/db_xref="GeneID:1025404"
/translation="MSESAFKDCFSTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTR
GRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYR
PLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHT
QAAEYLGVSYRHLLYVLAQFIHDGLLIKRKDI"
misc_feature 2277784..2278359
/gene="yeiL"
/locus_tag="SF2248"
/note="DNA-binding transcriptional activator YeiL;
Provisional; Region: PRK10402"
/db_xref="CDD:236682"
gene complement(2278510..2279760)
/gene="yeiM"
/locus_tag="SF2249"
/db_xref="GeneID:1026733"
CDS complement(2278510..2279760)
/gene="yeiM"
/locus_tag="SF2249"
/note="Code: F; COG: COG1972"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_708061.1"
/db_xref="GeneID:1026733"
/translation="MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGG
IMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVL
PAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAI
VKPFIDRVNRNELFTAICSGMASIAGSVMIGYAGMGVPIDYLLAASLMAIPGGILFAR
ILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALI
NGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVA
YLSFSPYLQTGGTLEVKTVAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGL
RALAAATLSNLMSATIAGFFIGLA"
misc_feature complement(2278519..2279760)
/gene="yeiM"
/locus_tag="SF2249"
/note="Nucleoside permease NupC [Nucleotide transport and
metabolism]; Region: NupC; COG1972"
/db_xref="CDD:441575"
gene complement(2279854..2280792)
/gene="yeiN"
/locus_tag="SF2250"
/db_xref="GeneID:1025430"
CDS complement(2279854..2280792)
/gene="yeiN"
/locus_tag="SF2250"
/note="Code: Q; COG: COG2313"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708062.1"
/db_xref="GeneID:1025430"
/translation="MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQN
AQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEKIELLGREGHNVTKVSRRDLPFV
VAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARA
MAVKWQSGLNGGLVVANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLAR
VAELTSGDSLKSNIQLVFNNAILASEIAKEYQRLAG"
misc_feature complement(2279860..2280771)
/gene="yeiN"
/locus_tag="SF2250"
/note="Pseudouridine-5'-phosphate glycosidase (pseudoU
degradation) [Nucleotide transport and metabolism];
Region: PsuG; COG2313"
/db_xref="CDD:441887"
gene complement(2280780..2281721)
/gene="yeiC"
/locus_tag="SF2251"
/db_xref="GeneID:1025398"
CDS complement(2280780..2281721)
/gene="yeiC"
/locus_tag="SF2251"
/note="Code: G; COG: COG0524"
/codon_start=1
/transl_table=11
/product="pseudouridine kinase"
/protein_id="NP_708063.1"
/db_xref="GeneID:1025398"
/translation="MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGR
NIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLD
NTGEMLVAINDMNISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVP
VFVDPVSAWKCVKVRDRLNQNHTLKPNRLEAETLSGIALSGRDDVAKVAAWFHQHGLN
RLVLSMGGDGVYYSDISGENGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESV
RFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN"
misc_feature complement(2280783..2281721)
/gene="yeiC"
/locus_tag="SF2251"
/note="pseudouridine kinase; Provisional; Region:
PRK09850"
/db_xref="CDD:182111"
misc_feature complement(order(2280954..2280956,2280963..2280965,
2281587..2281589))
/gene="yeiC"
/locus_tag="SF2251"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238916"
misc_feature complement(order(2280873..2280875,2280882..2280884,
2280948..2280950,2280957..2280962,2280969..2280971,
2281053..2281055,2281161..2281163))
/gene="yeiC"
/locus_tag="SF2251"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238916"
gene complement(2282145..2283836)
/gene="fruA"
/locus_tag="SF2252"
/db_xref="GeneID:1025440"
CDS complement(2282145..2283836)
/gene="fruA"
/locus_tag="SF2252"
/note="Code: G; COG: COG1299"
/codon_start=1
/transl_table=11
/product="PTS system fructose-specific transporter subunit
IIBC"
/protein_id="NP_708064.1"
/db_xref="GeneID:1025440"
/translation="MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMA
IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVTATAPVAASG
PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTSQELDKAVAEATPYEPAGKAQTATTE
GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA"
misc_feature complement(2282148..2283836)
/gene="fruA"
/locus_tag="SF2252"
/note="PTS system fructose-specific transporter subunits
IIBC; Provisional; Region: PRK10712"
/db_xref="CDD:236740"
gene complement(2283853..2284791)
/gene="fruK"
/locus_tag="SF2253"
/db_xref="GeneID:1025458"
CDS complement(2283853..2284791)
/gene="fruK"
/locus_tag="SF2253"
/note="Code: G; COG: COG1105"
/codon_start=1
/transl_table=11
/product="1-phosphofructokinase"
/protein_id="NP_708065.1"
/db_xref="GeneID:1025458"
/translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
misc_feature complement(2283856..2284791)
/gene="fruK"
/locus_tag="SF2253"
/note="1-phosphofructokinase; Provisional; Region: fruK;
PRK09513"
/db_xref="CDD:181923"
misc_feature complement(order(2284378..2284380,2284618..2284620,
2284624..2284626,2284642..2284644,2284654..2284656))
/gene="fruK"
/locus_tag="SF2253"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:238570"
misc_feature complement(order(2284027..2284029,2284033..2284035,
2284105..2284107,2284123..2284125,2284231..2284233,
2284237..2284239,2284291..2284293))
/gene="fruK"
/locus_tag="SF2253"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:238570"
gene complement(2284791..2285921)
/gene="fruB"
/locus_tag="SF2254"
/db_xref="GeneID:1027280"
CDS complement(2284791..2285921)
/gene="fruB"
/locus_tag="SF2254"
/note="Code: GT; COG: COG1762"
/codon_start=1
/transl_table=11
/product="bifunctional PTS system fructose-specific
transporter subunit IIA/HPr protein"
/protein_id="NP_708066.1"
/db_xref="GeneID:1027280"
/translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML
AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS
SDKHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
ASDLLTLQALNAARLKEARAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS
RAANAFDVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
misc_feature complement(2284797..2285921)
/gene="fruB"
/locus_tag="SF2254"
/note="fused PTS fructose transporter subunit IIA/HPr
protein; Region: PRK11109"
/db_xref="CDD:236849"
gene 2286289..2287467
/gene="yeiO"
/locus_tag="SF2255"
/db_xref="GeneID:1025403"
CDS 2286289..2287467
/gene="yeiO"
/locus_tag="SF2255"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="sugar efflux transporter B"
/protein_id="NP_708067.1"
/db_xref="GeneID:1025403"
/translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN
RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP
PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDT
LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
KRLGKRFLMRVAAVGGVCFYAGMLMAHSPAILLGLQLLNAIFIGILGGIGMLYFQDLM
PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFWVMTPTY
"
misc_feature 2286289..2287443
/gene="yeiO"
/locus_tag="SF2255"
/note="sugar efflux transporter SetB; Region: PRK15011"
/db_xref="CDD:184973"
mobile_element complement(2287446..2288213)
/mobile_element_type="insertion sequence:IS1"
gene complement(2287461..2287856)
/gene="insB"
/locus_tag="SF2256"
/db_xref="GeneID:1026557"
CDS complement(2287461..2287856)
/gene="insB"
/locus_tag="SF2256"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708068.1"
/db_xref="GeneID:1026557"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(2287464..2287853)
/gene="insB"
/locus_tag="SF2256"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2287883..2288158)
/gene="insA"
/locus_tag="SF2257"
/db_xref="GeneID:1027282"
CDS complement(2287883..2288158)
/gene="insA"
/locus_tag="SF2257"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708069.1"
/db_xref="GeneID:1027282"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMVMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<2287886..2288137)
/gene="insA"
/locus_tag="SF2257"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2288652..2289224
/gene="yeiP"
/locus_tag="SF2258"
/db_xref="GeneID:1025392"
CDS 2288652..2289224
/gene="yeiP"
/locus_tag="SF2258"
/note="Code: J; COG: COG0231"
/codon_start=1
/transl_table=11
/product="elongation factor"
/protein_id="NP_708070.5"
/db_xref="GeneID:1025392"
/translation="MPRANEIKKGMVLNYNGKLLLAKDIDIQSPTARGAATLYKMRFS
DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
misc_feature 2288652..2289221
/gene="yeiP"
/locus_tag="SF2258"
/note="elongation factor P; Provisional; Region: PRK04542"
/db_xref="CDD:179863"
gene 2289447..2290913
/gene="yeiQ"
/locus_tag="SF2259"
/db_xref="GeneID:1025394"
CDS 2289447..2290913
/gene="yeiQ"
/locus_tag="SF2259"
/note="Code: G; COG: COG0246"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_708071.2"
/db_xref="GeneID:1025394"
/translation="MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT
DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN
AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS
APGILVEALKRRRERSLTPFTVLSCDNIPDNGHVVKNAVLRMAEKRSPELAGWIKEHV
SFPGTMVDRIVPAATDESLAEISQHLGVNDPCAISCEPFIQWVVEDNFIAGRPAWEVA
GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAYISDCMQDRVFRYAARTLMLDE
QAPTLQIKDVDLTQYADKLIARFANPSLKHKTWQIAMDGSQKLPQRMLAGIRIHLGRE
TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLRE
VFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI"
misc_feature 2289447..2290892
/gene="yeiQ"
/locus_tag="SF2259"
/note="Mannitol-1-phosphate/altronate dehydrogenases
[Carbohydrate transport and metabolism]; Region: MtlD;
COG0246"
/db_xref="CDD:440016"
gene 2291031..2292017
/gene="yeiR"
/locus_tag="SF2260"
/db_xref="GeneID:1027285"
CDS 2291031..2292017
/gene="yeiR"
/locus_tag="SF2260"
/note="Code: R; COG: COG0523"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708072.1"
/db_xref="GeneID:1027285"
/translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGI
DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA
ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE
GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
misc_feature 2291031..2292002
/gene="yeiR"
/locus_tag="SF2260"
/note="Zinc metallochaperone YeiR/ZagA and related
GTPases, G3E family [General function prediction only];
Region: YejR; COG0523"
/db_xref="CDD:440289"
gene 2292056..2292769
/locus_tag="SF2261"
/db_xref="GeneID:1027299"
CDS 2292056..2292769
/locus_tag="SF2261"
/note="Code: I; COG: COG0671"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708073.2"
/db_xref="GeneID:1027299"
/translation="MIKNLPQIVLLNIVGPALFLSWYIPVNHGFWLPIDADIFYFFNQ
KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIMGLVMLLTA
VVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
MWRYFGKVAGLIALIIFMVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
LITFFDKSLPGKNKHFQNK"
misc_feature 2292347..2292685
/locus_tag="SF2261"
/note="Acid phosphatase homologues; Region: acidPPc;
smart00014"
/db_xref="CDD:214471"
misc_feature order(2292383..2292385,2292404..2292406,2292497..2292505,
2292605..2292607,2292623..2292625,2292635..2292637)
/locus_tag="SF2261"
/note="active site"
/db_xref="CDD:238813"
gene 2293181..2293747
/gene="spr"
/locus_tag="SF2262"
/db_xref="GeneID:1027294"
CDS 2293181..2293747
/gene="spr"
/locus_tag="SF2262"
/note="Code: M; COG: COG0791"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="NP_708074.1"
/db_xref="GeneID:1027294"
/translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
SSGVIISSMNEPYWKKRYNEARRVLSRS"
misc_feature 2293184..2293744
/gene="spr"
/locus_tag="SF2262"
/note="bifunctional murein DD-endopeptidase/murein
LD-carboxypeptidase; Region: spr; PRK10838"
/db_xref="CDD:236773"
gene 2293928..2295484
/gene="rtn"
/locus_tag="SF2263"
/db_xref="GeneID:1025444"
CDS 2293928..2295484
/gene="rtn"
/locus_tag="SF2263"
/codon_start=1
/transl_table=11
/product="phage resistance protein"
/protein_id="NP_708075.1"
/db_xref="GeneID:1025444"
/translation="MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
TLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPDREIMTAIKREQ
FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
ITSPVLDAVLTLAKRLNMLTVTEGVETPEQARWLSERGVNFMQGYWISHPLPLDDFVR
WLKKPYTPQW"
misc_feature 2293928..2295481
/gene="rtn"
/locus_tag="SF2263"
/note="cyclic di-GMP phosphodiesterase; Region: PRK10551"
/db_xref="CDD:182541"
gene 2295566..2297380
/gene="yejA"
/locus_tag="SF2264"
/db_xref="GeneID:1025457"
CDS 2295566..2297380
/gene="yejA"
/locus_tag="SF2264"
/note="Code: EP; COG: COG0747"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708076.2"
/db_xref="GeneID:1025457"
/translation="MIVRILLLFIALFTFGAQAQAIKESYTFAVLGEPRYAFNFNHFD
YVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFLTEGVPQFRLVYKGTTV
KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYHVTSW
KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRAVFSDRRVREAITLAFDF
EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPV
SKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQ
HSLQRLGINMDIRKVDNSQITNRMRNRDYDMMPRLWRAMPWPSSDLQISWSSEYINST
YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
WDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE"
misc_feature 2295680..2297284
/gene="yejA"
/locus_tag="SF2264"
/note="Methanobactin MbnE, a periplasmic binding protein
of the TonB-dependent transport system, and similar
proteins; Region: MbnE-like; cd08497"
/db_xref="CDD:173862"
gene 2297381..2298475
/gene="yejB"
/locus_tag="SF2265"
/db_xref="GeneID:1027283"
CDS 2297381..2298475
/gene="yejB"
/locus_tag="SF2265"
/note="Code: EP; COG: COG0601"
/codon_start=1
/transl_table=11
/product="microcin C ABC transporter permease YejB"
/protein_id="NP_708077.1"
/db_xref="GeneID:1027283"
/translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
YNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
QKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWK
HMFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
misc_feature 2297381..2298472
/gene="yejB"
/locus_tag="SF2265"
/note="microcin C ABC transporter permease YejB;
Provisional; Region: PRK15133"
/db_xref="CDD:185087"
misc_feature order(2297825..2297830,2297837..2297842,2297855..2297857,
2297888..2297899,2297903..2297932,2297939..2297944,
2297948..2297950,2298092..2298097,2298101..2298103,
2298107..2298109,2298116..2298121,2298125..2298127,
2298137..2298142,2298149..2298151,2298200..2298202,
2298242..2298247,2298254..2298256,2298281..2298292,
2298299..2298304,2298341..2298346,2298380..2298385,
2298392..2298397,2298401..2298406,2298413..2298418,
2298425..2298430)
/gene="yejB"
/locus_tag="SF2265"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(2297906..2297950,2298281..2298298)
/gene="yejB"
/locus_tag="SF2265"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature order(2297948..2297950,2298077..2298079,2298299..2298301,
2298335..2298337,2298344..2298346,2298380..2298382)
/gene="yejB"
/locus_tag="SF2265"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature order(2298152..2298190,2298206..2298211,2298221..2298223)
/gene="yejB"
/locus_tag="SF2265"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene 2298475..2299500
/gene="yejE"
/locus_tag="SF2266"
/db_xref="GeneID:1025442"
CDS 2298475..2299500
/gene="yejE"
/locus_tag="SF2266"
/note="Code: EP; COG: COG1173"
/codon_start=1
/transl_table=11
/product="microcin C ABC transporter permease"
/protein_id="NP_708078.1"
/db_xref="GeneID:1025442"
/translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA
FDPNKAV"
misc_feature 2298475..2299497
/gene="yejE"
/locus_tag="SF2266"
/note="microcin C ABC transporter permease; Provisional;
Region: PRK15021"
/db_xref="CDD:184982"
gene 2299502..2301091
/gene="yejF"
/locus_tag="SF2267"
/db_xref="GeneID:1027286"
CDS 2299502..2301091
/gene="yejF"
/locus_tag="SF2267"
/note="Code: R; COG: COG1123"
/codon_start=1
/transl_table=11
/product="microcin C ABC transporter ATP-binding protein
YejF"
/protein_id="NP_708079.2"
/db_xref="GeneID:1027286"
/translation="MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
GSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPM
VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
IVRKLAHRVAVMQNGRCVEQNNAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
LITSQGSIVFDGQPLQDLNRRQLLPTRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
EPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
PCARVFATPQQEYTRQLLALS"
misc_feature 2299502..2301088
/gene="yejF"
/locus_tag="SF2267"
/note="microcin C ABC transporter ATP-binding protein
YejF; Provisional; Region: PRK15134"
/db_xref="CDD:237917"
gene complement(2301095..2301439)
/gene="yejG"
/locus_tag="SF2268"
/db_xref="GeneID:1025441"
CDS complement(2301095..2301439)
/gene="yejG"
/locus_tag="SF2268"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708080.1"
/db_xref="GeneID:1025441"
/translation="MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVAL
KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
AIAEPFSNYNPF"
misc_feature complement(2301098..2301439)
/gene="yejG"
/locus_tag="SF2268"
/note="hypothetical protein; Provisional; Region:
PRK11835"
/db_xref="CDD:183333"
gene complement(2301772..2302962)
/gene="bcr"
/locus_tag="SF2269"
/db_xref="GeneID:1025454"
CDS complement(2301772..2302962)
/gene="bcr"
/locus_tag="SF2269"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="bicyclomycin/multidrug efflux system"
/protein_id="NP_708081.1"
/db_xref="GeneID:1025454"
/translation="MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVSA
GSTQMTLSTYILGFALGQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALAQTIDQLI
VMRFFHGLAAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIALLMAPIVGGWVLVW
LSWHYIFWILALAAILASAMIFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSY
MLASGFSFAGMFSFLSAGPFVYIEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRI
GALNMFRSGLWIQFIMAAWMVISAPLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDE
FPHMAGTASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIAFCATSSILFCLYASR
PKKR"
misc_feature complement(2301775..2302905)
/gene="bcr"
/locus_tag="SF2269"
/note="Bcr/CflA family multidrug efflux MFS transporter;
Region: PRK11102"
/db_xref="CDD:182964"
gene complement(2302990..2303685)
/gene="rsuA"
/locus_tag="SF2270"
/db_xref="GeneID:1024633"
CDS complement(2302990..2303685)
/gene="rsuA"
/locus_tag="SF2270"
/note="Code: J; COG: COG1187"
/codon_start=1
/transl_table=11
/product="16S rRNA pseudouridine(516) synthase"
/protein_id="NP_708082.1"
/db_xref="GeneID:1024633"
/translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
YRPLTEEEIASVV"
misc_feature complement(2302996..2303685)
/gene="rsuA"
/locus_tag="SF2270"
/note="16S rRNA pseudouridine(516) synthase RsuA; Region:
PRK10839"
/db_xref="CDD:236774"
gene 2303835..2305595
/gene="yejH"
/locus_tag="SF2271"
/db_xref="GeneID:1026753"
CDS 2303835..2305595
/gene="yejH"
/locus_tag="SF2271"
/note="Code: L; COG: COG1061"
/codon_start=1
/transl_table=11
/product="ATP-dependent helicase"
/protein_id="NP_708083.1"
/db_xref="GeneID:1026753"
/translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
AALITGDNPGAERDVLIEDFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY
QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
VREKVFDYEGRFRRAHELRG"
misc_feature 2303841..2305439
/gene="yejH"
/locus_tag="SF2271"
/note="Superfamily II DNA or RNA helicase [Transcription,
Replication, recombination, and repair]; Region: SSL2;
COG1061"
/db_xref="CDD:440681"
gene 2305720..2306004
/gene="rplY"
/locus_tag="SF2272"
/db_xref="GeneID:1027312"
CDS 2305720..2306004
/gene="rplY"
/locus_tag="SF2272"
/note="Code: J; COG: COG1825"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L25"
/protein_id="NP_708084.2"
/db_xref="GeneID:1027312"
/translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
DKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
misc_feature 2305720..2306001
/gene="rplY"
/locus_tag="SF2272"
/note="50S ribosomal protein L25; Reviewed; Region:
PRK05943"
/db_xref="CDD:180318"
misc_feature order(2305744..2305746,2305768..2305776,2305780..2305782,
2305810..2305818,2305828..2305830,2305942..2305947,
2305951..2305953,2305981..2305983,2305987..2305989,
2305993..2305995)
/gene="rplY"
/locus_tag="SF2272"
/note="5S rRNA interface [nucleotide binding]; other site"
/db_xref="CDD:198379"
misc_feature order(2305816..2305818,2305894..2305896,2305930..2305932,
2305942..2305944,2305993..2305998)
/gene="rplY"
/locus_tag="SF2272"
/note="CTC domain interface [polypeptide binding]; other
site"
/db_xref="CDD:198379"
misc_feature order(2305936..2305941,2305948..2305950,2305969..2305971,
2305993..2305995)
/gene="rplY"
/locus_tag="SF2272"
/note="L16 interface [polypeptide binding]; other site"
/db_xref="CDD:198379"
gene complement(2306143..2307150)
/gene="yejK"
/locus_tag="SF2273"
/db_xref="GeneID:1025426"
CDS complement(2306143..2307150)
/gene="yejK"
/locus_tag="SF2273"
/note="Code: R; COG: COG3081"
/codon_start=1
/transl_table=11
/product="nucleoid-associated protein NdpA"
/protein_id="NP_708085.1"
/db_xref="GeneID:1025426"
/translation="MSLDINHIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTEFAAEKGYELEESFPADR
STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
N"
misc_feature complement(2306149..2307150)
/gene="yejK"
/locus_tag="SF2273"
/note="nucleoid-associated protein NdpA; Validated;
Region: PRK00378"
/db_xref="CDD:178993"
gene 2307332..2307559
/gene="yejL"
/locus_tag="SF2274"
/db_xref="GeneID:1027288"
CDS 2307332..2307559
/gene="yejL"
/locus_tag="SF2274"
/note="Code: S; COG: COG3082"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708086.1"
/db_xref="GeneID:1027288"
/translation="MPQISRYSNEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
INTSIAPAQRQAIANSFASALQSSINEDKAH"
misc_feature 2307332..2307556
/gene="yejL"
/locus_tag="SF2274"
/note="hypothetical protein; Provisional; Region:
PRK13689"
/db_xref="CDD:237471"
gene 2307579..2309339
/gene="yejM"
/locus_tag="SF2275"
/db_xref="GeneID:1025450"
CDS 2307579..2309339
/gene="yejM"
/locus_tag="SF2275"
/note="Code: R; COG: COG3083"
/codon_start=1
/transl_table=11
/product="sulfatase"
/protein_id="NP_708087.1"
/db_xref="GeneID:1025450"
/translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDDQTATQWINWLGRYAQEDNR
WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQIKRVLNALRDSGKLDNTVVIITAG
RGIPLSEEEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
KPQLSLLLQVLTDEKRFIAN"
misc_feature 2307579..2309336
/gene="yejM"
/locus_tag="SF2275"
/note="LPS biosynthesis-modulating metalloenzyme YejM;
Region: LapC_YejM_PbgA; NF038282"
/db_xref="CDD:468449"
gene 2309414..2309491
/locus_tag="SF4486"
/db_xref="GeneID:3161802"
tRNA 2309414..2309491
/locus_tag="SF4486"
/product="tRNA-Pro"
/codon_recognized="CCC"
/db_xref="GeneID:3161802"
gene complement(2309589..2312099)
/gene="yejO"
/locus_tag="SF2276"
/db_xref="GeneID:1025455"
CDS complement(2309589..2312099)
/gene="yejO"
/locus_tag="SF2276"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_708088.2"
/db_xref="GeneID:1025455"
/translation="MASTVEYGETVDGVILEKDIQLVYGTANNTKINPGGEQHIKEFG
VSSNTEINGGYQYIEMNGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGPANDTT
IKGGRLIVEKDGGAVFAAIEKGGLLEVKEGGFALAVDQKTGGAIKTTTRAMEVFGTNR
LGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATGVDKKAGG
KLIVSTNALEVSGTNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQ
SLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGRANVWAGTMVNVSVR
GNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSAWTIIADI
TTTNQNTRLNLANLAMSGANVIMMAEPVTRSSVTASAENFITLTTNTLSGNGNFYMRT
DMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLGNAGGVV
DIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRERLGSV
KGVSYDTVMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLFFGY
SHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAF
GDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTRILR
AEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQA
GIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF"
misc_feature complement(2310672..2311916)
/gene="yejO"
/locus_tag="SF2276"
/note="hypothetical protein; Provisional; Region:
PRK09945"
/db_xref="CDD:137602"
misc_feature complement(2310498..2311277)
/gene="yejO"
/locus_tag="SF2276"
/note="Pertactin-like passenger domains (virulence
factors), C-terminal, subgroup 1, of autotransporter
proteins of the type V secretion system of Gram-negative
bacteria. This subgroup includes the passenger domains of
Neisseria and Haemophilus IgA1 proteases; Region:
PL1_Passenger_AT; cd01343"
/db_xref="CDD:238653"
misc_feature complement(2309592..2310818)
/gene="yejO"
/locus_tag="SF2276"
/note="outer membrane autotransporter barrel domain;
Region: autotrans_barl; TIGR01414"
/db_xref="CDD:273608"
gene 2312500..2313147
/gene="narP"
/locus_tag="SF2277"
/db_xref="GeneID:1025461"
CDS 2312500..2313147
/gene="narP"
/locus_tag="SF2277"
/note="Code: TK; COG: COG2197"
/codon_start=1
/transl_table=11
/product="transcriptional regulator NarP"
/protein_id="NP_708089.2"
/db_xref="GeneID:1025461"
/translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGEGASA
IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
ADGYLLKDSDPEVLLEAIRTGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD
VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
misc_feature 2312500..2313144
/gene="narP"
/locus_tag="SF2277"
/note="nitrate/nitrite response regulator protein NarP;
Region: PRK10403"
/db_xref="CDD:182431"
gene complement(2313358..2314410)
/gene="ccmH"
/locus_tag="SF2278"
/db_xref="GeneID:1025443"
CDS complement(2313358..2314410)
/gene="ccmH"
/locus_tag="SF2278"
/note="Code: R; COG: COG0457"
/codon_start=1
/transl_table=11
/product="heme lyase subunit"
/protein_id="NP_708090.1"
/db_xref="GeneID:1025443"
/translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
LLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIV
AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIE
RSIAQAMQHLSPQESK"
misc_feature complement(2314048..2314410)
/gene="ccmH"
/locus_tag="SF2278"
/note="Cytochrome c-type biogenesis protein CcmH/NrfF
[Energy production and conversion, Posttranslational
modification, protein turnover, chaperones]; Region: NrfF;
COG3088"
/db_xref="CDD:442322"
misc_feature complement(order(2314273..2314275,2314282..2314284))
/gene="ccmH"
/locus_tag="SF2278"
/note="putative catalytic site [active]"
/db_xref="CDD:319866"
misc_feature complement(2313391..2313795)
/gene="ccmH"
/locus_tag="SF2278"
/note="Cytochrome c-type biogenesis protein CcmH/NrfG
[Energy production and conversion, Posttranslational
modification, protein turnover, chaperones]; Region: NrfG;
COG4235"
/db_xref="CDD:443378"
misc_feature complement(2313661..2313747)
/gene="ccmH"
/locus_tag="SF2278"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature complement(order(2313496..2313498,2313505..2313510,
2313517..2313522,2313529..2313531,2313607..2313612,
2313616..2313621,2313628..2313633,2313640..2313642,
2313712..2313714,2313718..2313723,2313730..2313735,
2313742..2313744))
/gene="ccmH"
/locus_tag="SF2278"
/note="putative protein binding surface [polypeptide
binding]; other site"
/db_xref="CDD:276809"
misc_feature complement(2313547..2313648)
/gene="ccmH"
/locus_tag="SF2278"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature complement(2313448..2313534)
/gene="ccmH"
/locus_tag="SF2278"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
gene complement(2314407..2314964)
/gene="dsbE"
/locus_tag="SF2279"
/db_xref="GeneID:1027269"
CDS complement(2314407..2314964)
/gene="dsbE"
/locus_tag="SF2279"
/note="Code: OC; COG: COG0526"
/codon_start=1
/transl_table=11
/product="thiol:disulfide interchange protein DsbE"
/protein_id="NP_708091.1"
/db_xref="GeneID:1027269"
/translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
GDLNPRVWEEEIKPLWEKYSKEAAQ"
misc_feature complement(2314410..2314964)
/gene="dsbE"
/locus_tag="SF2279"
/note="thiol:disulfide interchange protein DsbE;
Provisional; Region: PRK15412"
/db_xref="CDD:185310"
misc_feature complement(order(2314716..2314718,2314725..2314727))
/gene="dsbE"
/locus_tag="SF2279"
/note="catalytic residues [active]"
/db_xref="CDD:239308"
misc_feature complement(2314578..2314646)
/gene="dsbE"
/locus_tag="SF2279"
/note="central insert [active]"
/db_xref="CDD:239308"
gene complement(2314961..2316904)
/gene="ccmF"
/locus_tag="SF2280"
/db_xref="GeneID:1027261"
CDS complement(2314961..2316904)
/gene="ccmF"
/locus_tag="SF2280"
/note="Code: O; COG: COG1138"
/codon_start=1
/transl_table=11
/product="cytochrome c-type biogenesis protein"
/protein_id="NP_708092.1"
/db_xref="GeneID:1027261"
/translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
LLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL
MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIF
LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWT
LLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARG
HKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
TMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVA
MTVLGLAMACWIAVLATAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYS
VERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKPETVLYAEKRY
YNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGG
LLCLFDPRYRKRVSPQKTAPEAV"
misc_feature complement(2314970..2316901)
/gene="ccmF"
/locus_tag="SF2280"
/note="Cytochrome c biogenesis protein CcmF [Energy
production and conversion, Posttranslational modification,
protein turnover, chaperones]; Region: CcmF; COG1138"
/db_xref="CDD:440753"
gene complement(2316901..2317380)
/gene="ccmE"
/locus_tag="SF2281"
/db_xref="GeneID:1025436"
CDS complement(2316901..2317380)
/gene="ccmE"
/locus_tag="SF2281"
/note="Code: O; COG: COG2332"
/codon_start=1
/transl_table=11
/product="cytochrome c-type biogenesis protein CcmE"
/protein_id="NP_708093.1"
/db_xref="GeneID:1025436"
/translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL
FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
misc_feature complement(2316904..2317380)
/gene="ccmE"
/locus_tag="SF2281"
/note="cytochrome c maturation protein CcmE; Region:
PRK13150"
/db_xref="CDD:139376"
gene complement(2317377..2317586)
/gene="ccmD"
/locus_tag="SF2282"
/db_xref="GeneID:1027291"
CDS complement(2317377..2317586)
/gene="ccmD"
/locus_tag="SF2282"
/note="Code: N; COG: COG3114"
/codon_start=1
/transl_table=11
/product="heme exporter protein C"
/protein_id="NP_708094.1"
/db_xref="GeneID:1027291"
/translation="MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR
AILRGVAQQRAREARLRAAQQQEAA"
misc_feature complement(<2317428..2317580)
/gene="ccmD"
/locus_tag="SF2282"
/note="Heme exporter protein D [Intracellular trafficking,
secretion, and vesicular transport]; Region: CcmD;
COG3114"
/db_xref="CDD:442348"
gene complement(2317583..2318320)
/gene="ccmC"
/locus_tag="SF2283"
/db_xref="GeneID:1027271"
CDS complement(2317583..2318320)
/gene="ccmC"
/locus_tag="SF2283"
/note="Code: O; COG: COG0755"
/codon_start=1
/transl_table=11
/product="heme exporter protein C"
/protein_id="NP_708095.2"
/db_xref="GeneID:1027271"
/translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
MRMRNLILLMEKRRPWVSELILKRGRK"
misc_feature complement(2317646..2318188)
/gene="ccmC"
/locus_tag="SF2283"
/note="heme exporter protein CcmC; Region: ccmC;
TIGR01191"
/db_xref="CDD:273492"
gene complement(2318362..2319024)
/gene="ccmB"
/locus_tag="SF2284"
/db_xref="GeneID:1025449"
CDS complement(2318362..2319024)
/gene="ccmB"
/locus_tag="SF2284"
/note="cytochrome c-type biogenesis protein CcmB; Code: O;
COG: COG2386"
/codon_start=1
/transl_table=11
/product="heme exporter protein B"
/protein_id="NP_708096.1"
/db_xref="GeneID:1025449"
/translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL
LSILVLPLTIPLLIFATAAMDAASMHLPVEGYLAILGALLAGTATLSPFATAAALRIS
IQ"
misc_feature complement(2318377..2319009)
/gene="ccmB"
/locus_tag="SF2284"
/note="heme exporter protein CcmB; Region: ccmB;
TIGR01190"
/db_xref="CDD:200083"
gene complement(2319021..2319644)
/gene="ccmA"
/locus_tag="SF2285"
/db_xref="GeneID:1027260"
CDS complement(2319021..2319644)
/gene="ccmA"
/locus_tag="SF2285"
/note="Code: Q; COG: COG1131"
/codon_start=1
/transl_table=11
/product="cytochrome c biogenesis protein CcmA"
/protein_id="NP_708097.1"
/db_xref="GeneID:1027260"
/translation="MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTT
LLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQTLLWIGHQPGIKTRLTALENLHFYHR
DGDAAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAID
VNGVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA"
misc_feature complement(2319036..2319638)
/gene="ccmA"
/locus_tag="SF2285"
/note="cytochrome c biogenesis heme-transporting ATPase
CcmA; Region: PRK13538"
/db_xref="CDD:184125"
gene complement(2319657..2320259)
/gene="napC"
/locus_tag="SF2286"
/db_xref="GeneID:1026844"
CDS complement(2319657..2320259)
/gene="napC"
/locus_tag="SF2286"
/note="Code: C; COG: COG3005"
/codon_start=1
/transl_table=11
/product="cytochrome c-type protein NapC"
/protein_id="NP_708098.1"
/db_xref="GeneID:1026844"
/translation="MGNSDRKPGLIKRLWKWWRTPSHLALGTLLLIGFVGGIVFWGGF
NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
misc_feature complement(2319660..2320259)
/gene="napC"
/locus_tag="SF2286"
/note="cytochrome c-type protein NapC; Provisional;
Region: PRK10617"
/db_xref="CDD:182590"
gene complement(2320269..2320718)
/gene="napB"
/locus_tag="SF2287"
/db_xref="GeneID:1025488"
CDS complement(2320269..2320718)
/gene="napB"
/locus_tag="SF2287"
/note="Code: C; COG: COG3043"
/codon_start=1
/transl_table=11
/product="nitrate reductase cytochrome C550 subunit"
/protein_id="NP_708099.2"
/db_xref="GeneID:1025488"
/translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
GAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
misc_feature complement(2320272..2320718)
/gene="napB"
/locus_tag="SF2287"
/note="nitrate reductase cytochrome c-type subunit;
Region: napB; PRK11586"
/db_xref="CDD:183214"
gene complement(2320715..2321578)
/gene="napH"
/locus_tag="SF2288"
/db_xref="GeneID:1025435"
CDS complement(2320715..2321578)
/gene="napH"
/locus_tag="SF2288"
/note="Code: C; COG: COG0348"
/codon_start=1
/transl_table=11
/product="quinol dehydrogenase membrane protein"
/protein_id="NP_708100.1"
/db_xref="GeneID:1025435"
/translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILVGSALTGTLIWEWI
NPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
AASDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
ITTRWSSGAKS"
misc_feature complement(2320718..2321530)
/gene="napH"
/locus_tag="SF2288"
/note="quinol dehydrogenase membrane component;
Provisional; Region: napH; PRK09477"
/db_xref="CDD:236535"
gene complement(2321565..2322260)
/gene="napG"
/locus_tag="SF2289"
/db_xref="GeneID:1027262"
CDS complement(2321565..2322260)
/gene="napG"
/locus_tag="SF2289"
/note="Code: C; COG: COG1145"
/codon_start=1
/transl_table=11
/product="quinol dehydrogenase periplasmic protein"
/protein_id="NP_708101.1"
/db_xref="GeneID:1027262"
/translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
ITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
YRFGWLEGNNGKS"
misc_feature complement(2321571..2322260)
/gene="napG"
/locus_tag="SF2289"
/note="quinol dehydrogenase periplasmic component;
Provisional; Region: napG; PRK09476"
/db_xref="CDD:236534"
gene complement(2322267..2324753)
/gene="napA"
/locus_tag="SF2290"
/db_xref="GeneID:1026754"
CDS complement(2322267..2324753)
/gene="napA"
/locus_tag="SF2290"
/note="Code: C; COG: COG0243"
/codon_start=1
/transl_table=11
/product="nitrate reductase catalytic subunit"
/protein_id="NP_708102.1"
/db_xref="GeneID:1026754"
/translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
RMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
MHPILWSRITNSRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
RRFKTEEVWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
QLVNKLTLDATDPLSKETDFKKCAVKLEKV"
misc_feature complement(2322270..2324753)
/gene="napA"
/locus_tag="SF2290"
/note="nitrate reductase catalytic subunit NapA; Region:
PRK13532"
/db_xref="CDD:237416"
misc_feature complement(order(2324088..2324090,2324511..2324513,
2324595..2324597,2324607..2324612,2324616..2324618))
/gene="napA"
/locus_tag="SF2290"
/note="[4Fe-4S] binding site [ion binding]; other site"
/db_xref="CDD:239155"
misc_feature complement(order(2323080..2323082,2323161..2323163,
2323173..2323181,2323221..2323232,2323296..2323298,
2323308..2323313,2323524..2323529,2323626..2323628,
2323635..2323643,2323962..2323964,2323968..2323970,
2324019..2324027,2324097..2324102,2324109..2324120,
2324217..2324219,2324229..2324231,2324304..2324306,
2324505..2324507))
/gene="napA"
/locus_tag="SF2290"
/note="molybdopterin cofactor binding site; other site"
/db_xref="CDD:239155"
gene complement(2324750..2325013)
/gene="napD"
/locus_tag="SF2291"
/db_xref="GeneID:1027277"
CDS complement(2324750..2325013)
/gene="napD"
/locus_tag="SF2291"
/note="Code: P; COG: COG3062"
/codon_start=1
/transl_table=11
/product="assembly protein for periplasmic nitrate
reductase"
/protein_id="NP_708103.1"
/db_xref="GeneID:1027277"
/translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
misc_feature complement(2324753..2325013)
/gene="napD"
/locus_tag="SF2291"
/note="chaperone NapD; Region: PRK10553"
/db_xref="CDD:182542"
gene complement(2325003..2325497)
/gene="napF"
/locus_tag="SF2292"
/db_xref="GeneID:1027276"
CDS complement(2325003..2325497)
/gene="napF"
/locus_tag="SF2292"
/note="Code: C; COG: COG1145"
/codon_start=1
/transl_table=11
/product="ferredoxin-type protein"
/protein_id="NP_708104.1"
/db_xref="GeneID:1027276"
/translation="MKIDASRRGILTGCWRKASNGIRPPWSGDESHFLTHCTRCDACI
NACENNILQRGTGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDAC
LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQAQLNSQLCNGCGACAASCPVSAITAEY
LHAH"
misc_feature complement(2325006..2325494)
/gene="napF"
/locus_tag="SF2292"
/note="ferredoxin-type protein NapF; Region: PRK10194"
/db_xref="CDD:182296"
gene 2325905..2326393
/gene="eco"
/locus_tag="SF2293"
/db_xref="GeneID:1025479"
CDS 2325905..2326393
/gene="eco"
/locus_tag="SF2293"
/codon_start=1
/transl_table=11
/product="ecotin"
/protein_id="NP_708105.2"
/db_xref="GeneID:1025479"
/translation="MKTILPEVLFAAFATTSAWAAESVQPLEKIAPYPQAETGMKRQV
IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVS
TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAE
VR"
misc_feature 2325905..2326384
/gene="eco"
/locus_tag="SF2293"
/note="ecotin; Provisional; Region: PRK03719"
/db_xref="CDD:179637"
misc_feature order(2326160..2326174,2326286..2326303)
/gene="eco"
/locus_tag="SF2293"
/note="secondary substrate binding site [active]"
/db_xref="CDD:153074"
misc_feature 2326208..2326219
/gene="eco"
/locus_tag="SF2293"
/note="primary substrate binding site [active]"
/db_xref="CDD:153074"
misc_feature 2326214..2326219
/gene="eco"
/locus_tag="SF2293"
/note="inhibition loop"
/db_xref="CDD:153074"
misc_feature 2326352..2326384
/gene="eco"
/locus_tag="SF2293"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:153074"
gene complement(2326515..2328139)
/gene="yojH"
/locus_tag="SF2294"
/pseudo
/db_xref="GeneID:1027290"
misc_feature complement(2326515..2328139)
/gene="yojH"
/locus_tag="SF2294"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788539 (549 aa). BLAST with
identity of 97% in 541 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2328357..2330000)
/gene="yojI"
/locus_tag="SF2295"
/db_xref="GeneID:1027295"
CDS complement(2328357..2330000)
/gene="yojI"
/locus_tag="SF2295"
/note="Code: Q; COG: COG1132"
/codon_start=1
/transl_table=11
/product="multidrug transporter membrane protein-binding
protein"
/protein_id="NP_708106.1"
/db_xref="GeneID:1027295"
/translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETA
DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
GSASLLAGLTSDVRNITIAFVRLPELGQGIILTIGSSAYLWMLSGKMLLVTAIWMAIT
IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA
QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
TPLLSAVGALPTLLTAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFAYQD
NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
EDYRKLFSAVFTDVWLFDQLLGPEGQPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
SKGQKKRVALLLALAEERDIILLDEWAVDQDPHFRREFYQVLLPLMQEMGKTIFAISH
DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
misc_feature complement(2328360..2330000)
/gene="yojI"
/locus_tag="SF2295"
/note="multidrug transporter membrane
component/ATP-binding component; Provisional; Region:
PRK10522"
/db_xref="CDD:236707"
gene complement(2330076..2330726)
/gene="alkB"
/locus_tag="SF2296"
/db_xref="GeneID:1027266"
CDS complement(2330076..2330726)
/gene="alkB"
/locus_tag="SF2296"
/note="Code: L; COG: COG3145"
/codon_start=1
/transl_table=11
/product="alpha-ketoglutarate-dependent dioxygenase AlkB"
/protein_id="NP_708107.1"
/db_xref="GeneID:1027266"
/translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS
PFRQMVAPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHDLCQR
AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK
RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTTDCRYNLTFRQAGKKE"
misc_feature complement(2330091..2330726)
/gene="alkB"
/locus_tag="SF2296"
/note="DNA oxidative demethylase AlkB; Region: PRK15401"
/db_xref="CDD:237957"
gene complement(2330726..2331790)
/gene="ada"
/locus_tag="SF2297"
/db_xref="GeneID:1027265"
CDS complement(2330726..2331790)
/gene="ada"
/locus_tag="SF2297"
/codon_start=1
/transl_table=11
/product="bifunctional DNA-binding transcriptional dual
regulator/O6-methylguanine-DNA methyltransferase"
/protein_id="NP_708108.1"
/db_xref="GeneID:1027265"
/translation="MKNATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA
RHALRENVSFYANASEALAAGFRPCKRCQPDKANPRQHRLDKITHACRLLEQETPVTL
EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP
DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCELGRCLVAESERGICAILLGDD
DATLISELQQMFPAADNAPADLTFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW
QALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGTLSGY
RWGVSRKAQLLRREAENEER"
misc_feature complement(2330732..2331790)
/gene="ada"
/locus_tag="SF2297"
/note="bifunctional DNA-binding transcriptional
regulator/O6-methylguanine-DNA methyltransferase Ada;
Region: PRK15435"
/db_xref="CDD:185333"
gene complement(2331864..2332919)
/gene="yojL"
/locus_tag="SF2298"
/db_xref="GeneID:1027268"
CDS complement(2331864..2332919)
/gene="yojL"
/locus_tag="SF2298"
/note="Code: H; COG: COG1477"
/codon_start=1
/transl_table=11
/product="thiamine biosynthesis lipoprotein ApbE"
/protein_id="NP_708109.1"
/db_xref="GeneID:1027268"
/translation="MEISFTRVALLVAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
MADIVTTSLRIGARTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQH
LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR
GMNGEGQPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
KTWMSPQFKSFLVSEKN"
misc_feature complement(2331870..2332919)
/gene="yojL"
/locus_tag="SF2298"
/note="thiamine biosynthesis lipoprotein ApbE;
Provisional; Region: PRK10461"
/db_xref="CDD:182478"
gene complement(2333031..2334152)
/gene="ompC"
/locus_tag="SF2299"
/db_xref="GeneID:1026756"
CDS complement(2333031..2334152)
/gene="ompC"
/locus_tag="SF2299"
/note="Code: M; COG: COG3203"
/codon_start=1
/transl_table=11
/product="porin"
/protein_id="NP_708110.1"
/db_xref="GeneID:1026756"
/translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
SDDKSVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLK
FQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRSTDFFGL
VDGLNFAVQYQGKNGSPEGEGMTNNGREALRQNGDGVGGSITYDYEGFGIGAAVSSSK
RTDDQNFGLNRYDERYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGNLGWA
NKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGVINGRNYDDEDILKYVDVGATYYFN
KNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF"
misc_feature complement(2333034..2334113)
/gene="ompC"
/locus_tag="SF2299"
/note="outer membrane porin protein C; Provisional;
Region: PRK10554"
/db_xref="CDD:182543"
gene 2334487..2334578
/gene="micF"
/locus_tag="SF4556"
/db_xref="GeneID:1025469"
ncRNA 2334487..2334578
/ncRNA_class="other"
/gene="micF"
/locus_tag="SF4556"
/product="MicF RNA; inhibitor of OpmF"
/db_xref="GeneID:1025469"
gene 2334890..2337562
/gene="yojN"
/locus_tag="SF2300"
/db_xref="GeneID:1025460"
CDS 2334890..2337562
/gene="yojN"
/locus_tag="SF2300"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="phosphotransfer intermediate protein in
two-component regulatory system with RcsBC"
/protein_id="NP_708111.1"
/db_xref="GeneID:1025460"
/translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
WLKDKSYQIVDITHAIQKRVDTWRYVTRQIYDNIAATTSPSSGEGLQETRLKQDVYYL
EKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLIST
LPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT
FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNS
TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS
SRSTESVPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL
NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVEE
IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD
RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH
FPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE
VEEEEERLLDDVCVMVDVTSAEIRNIVTRLLENWGATCITPDERLISQDYDIFLTDNP
SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG
GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG
KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL"
misc_feature 2334911..2337559
/gene="yojN"
/locus_tag="SF2300"
/note="phosphotransfer intermediate protein in
two-component regulatory system with RcsBC; Provisional;
Region: PRK10618"
/db_xref="CDD:236726"
gene 2337579..2338229
/gene="rcsB"
/locus_tag="SF2301"
/db_xref="GeneID:1025149"
CDS 2337579..2338229
/gene="rcsB"
/locus_tag="SF2301"
/note="Code: TK; COG: COG2197"
/codon_start=1
/transl_table=11
/product="transcriptional regulator RcsB"
/protein_id="NP_708112.2"
/db_xref="GeneID:1025149"
/translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
misc_feature 2337579..2338226
/gene="rcsB"
/locus_tag="SF2301"
/note="transcriptional regulator RcsB; Provisional;
Region: PRK10840"
/db_xref="CDD:182771"
gene complement(2338429..2341278)
/gene="rcsC"
/locus_tag="SF2302"
/db_xref="GeneID:1025470"
CDS complement(2338429..2341278)
/gene="rcsC"
/locus_tag="SF2302"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="hybrid sensory kinase in two-component
regulatory system with RcsB and YojN"
/protein_id="NP_708113.2"
/db_xref="GeneID:1025470"
/translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPCVGYFYALTPVYLANR
LQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSW
FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA
RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
QFTVRIPLYGAQYPHNKGVKGLSGKRCCLTVPNASLCQFLETSLQRSGIVVTTYEGQE
PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRDS"
misc_feature complement(2338438..2341209)
/gene="rcsC"
/locus_tag="SF2302"
/note="two-component system sensor histidine kinase RcsC;
Region: PRK10841"
/db_xref="CDD:182772"
gene complement(2341553..2342329)
/locus_tag="SF2303"
/db_xref="GeneID:1027278"
CDS complement(2341553..2342329)
/locus_tag="SF2303"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708114.1"
/db_xref="GeneID:1027278"
/translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF
SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSF
ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV
VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETE
LTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW"
misc_feature complement(2341556..2341924)
/locus_tag="SF2303"
/note="Uncharacterized conserved protein YfaP, DUF2135
family [Function unknown]; Region: YfaP; COG4676"
/db_xref="CDD:443712"
gene complement(2342334..2343983)
/locus_tag="SF2304"
/db_xref="GeneID:1025463"
CDS complement(2342334..2343983)
/locus_tag="SF2304"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708115.1"
/db_xref="GeneID:1025463"
/translation="MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGV
TKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD
TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA
TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD
GTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST
TAVKPSVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE
AKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT
QELIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS
TCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN
FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD"
misc_feature complement(2342343..2343983)
/locus_tag="SF2304"
/note="Uncharacterized conserved protein YfaQ, DUF2300
domain [Function unknown]; Region: YfaQ; COG5445"
/db_xref="CDD:444196"
gene complement(2343984..2346261)
/locus_tag="SF2305"
/pseudogene="unknown"
/db_xref="GeneID:1027270"
misc_feature complement(2344486..2349751)
/note="Similar to Escherichia coli K12 membrane protein
gi: 1788559 (1338 aa). BLAST with identity of 98% in 1755
aa. This CDS has been disrupted by insertion. The sequence
has been checked and is believed to be correct."
mobile_element complement(2346250..2347498)
/mobile_element_type="insertion sequence:IS911"
gene complement(2346258..2347097)
/locus_tag="SF2306"
/db_xref="GeneID:1027279"
CDS complement(2346258..2347097)
/locus_tag="SF2306"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_708117.1"
/db_xref="GeneID:1027279"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(2346267..2347076)
/locus_tag="SF2306"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(2347124..2347462)
/locus_tag="SF2307"
/db_xref="GeneID:1025484"
CDS complement(2347124..2347462)
/locus_tag="SF2307"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_708118.1"
/db_xref="GeneID:1025484"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature complement(2347154..2347423)
/locus_tag="SF2307"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(2349775..2350398)
/locus_tag="SF2309"
/db_xref="GeneID:1027249"
CDS complement(2349775..2350398)
/locus_tag="SF2309"
/note="Code: S; COG: COG3234"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708119.2"
/db_xref="GeneID:1027249"
/translation="MRHGLLALICWLCCVVAHSEMLNVEQSRLFRAWFVRIAQEQLRQ
GPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNW
NQGSGKNGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYH
TGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR"
misc_feature complement(2349784..2350335)
/locus_tag="SF2309"
/note="Uncharacterized conserved protein YfaT, DUF1175
family [Function unknown]; Region: yfaT; COG3234"
/db_xref="CDD:442466"
gene complement(2350395..2352131)
/gene="yfaA"
/locus_tag="SF2310"
/pseudo
/db_xref="GeneID:1027250"
misc_feature complement(2350395..2352131)
/gene="yfaA"
/locus_tag="SF2310"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788561 (579 aa). BLAST with
identity of 98% in 578 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2352232..2354859)
/gene="gyrA"
/locus_tag="SF2311"
/db_xref="GeneID:1027274"
CDS complement(2352232..2354859)
/gene="gyrA"
/locus_tag="SF2311"
/note="Code: L; COG: COG0188"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit A"
/protein_id="NP_708120.1"
/db_xref="GeneID:1027274"
/translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK
IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL
IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
EGDDEIAPEVDVDDEPEEE"
misc_feature complement(2352334..2354841)
/gene="gyrA"
/locus_tag="SF2311"
/note="DNA gyrase subunit A; Validated; Region: PRK05560"
/db_xref="CDD:235502"
misc_feature complement(2353105..2353248)
/gene="gyrA"
/locus_tag="SF2311"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
misc_feature complement(2352946..2353098)
/gene="gyrA"
/locus_tag="SF2311"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
misc_feature complement(2352796..2352930)
/gene="gyrA"
/locus_tag="SF2311"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
misc_feature complement(2352643..2352786)
/gene="gyrA"
/locus_tag="SF2311"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
misc_feature complement(2352490..2352636)
/gene="gyrA"
/locus_tag="SF2311"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
gene 2355006..2355728
/gene="ubiG"
/locus_tag="SF2312"
/db_xref="GeneID:1025473"
CDS 2355006..2355728
/gene="ubiG"
/locus_tag="SF2312"
/note="Code: H; COG: COG2227"
/codon_start=1
/transl_table=11
/product="bifunctional 3-demethylubiquinone-9
3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol
methylase"
/protein_id="NP_708121.1"
/db_xref="GeneID:1025473"
/translation="MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
ITNSFKLGPGVDVNYMLHTQNK"
misc_feature 2355051..2355707
/gene="ubiG"
/locus_tag="SF2312"
/note="ubiquinone biosynthesis O-methyltransferase;
Region: UbiG; TIGR01983"
/db_xref="CDD:273910"
misc_feature order(2355192..2355212,2355258..2355263,2355333..2355341,
2355390..2355392)
/gene="ubiG"
/locus_tag="SF2312"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
misc_feature complement(2355856..2360922)
/note="Similar to Escherichia coli K12 ATP-binding
component of a transport system gi: 1788565 (1251 aa).
BLAST with identity of 96% in 1688 aa. This CDS has been
disrupted by insertion. The sequence has been checked and
is believed to be correct."
gene complement(2355856..2359455)
/locus_tag="SF2312a"
/pseudogene="unknown"
/db_xref="GeneID:16608343"
mobile_element 2359428..2360758
/mobile_element_type="insertion sequence:IS2"
gene 2359908..2360747
/locus_tag="SF2314"
/db_xref="GeneID:1025466"
CDS 2359908..2360747
/locus_tag="SF2314"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 ORF2"
/protein_id="NP_708123.3"
/db_xref="GeneID:1025466"
/translation="MSRAQLHVILRRTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTY
GYRRVWALLRRQAELDGMPAINAKRIYRLMRQNALLLERKLAVPPSKRAHTGRVAVKE
SNQRWCSDGFEFRCDNGEKLRVTFALDCCDRKALHWAVTTGGFNSETVQDVMLGAVER
RFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRC
LEI"
misc_feature 2359908..2360744
/locus_tag="SF2314"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene 2361618..2363903
/gene="nrdA"
/locus_tag="SF2316"
/db_xref="GeneID:1027246"
CDS 2361618..2363903
/gene="nrdA"
/locus_tag="SF2316"
/note="Code: F; COG: COG0209"
/codon_start=1
/transl_table=11
/product="ribonucleotide-diphosphate reductase subunit
alpha"
/protein_id="NP_708124.1"
/db_xref="GeneID:1027246"
/translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPTIAPVRQSNLCLEIALPTKPLN
DVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP
WFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
AQDDLVPSIQDDGCESGACKI"
misc_feature 2361627..2363900
/gene="nrdA"
/locus_tag="SF2316"
/note="ribonucleoside-diphosphate reductase subunit alpha;
Region: PRK09103"
/db_xref="CDD:181649"
gene 2364098..2365267
/gene="nrdB"
/locus_tag="SF2317"
/db_xref="GeneID:1027242"
CDS 2364098..2365267
/gene="nrdB"
/locus_tag="SF2317"
/note="Code: F; COG: COG0208"
/codon_start=1
/transl_table=11
/product="ribonucleoside-diphosphate reductase 1 subunit
beta"
/protein_id="NP_708125.4"
/db_xref="GeneID:1027242"
/translation="MPYPALNSQQDTLMAYTTFSQTKNDQLKEPMFFGQPVNVARYDQ
QKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQG
RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQI
QKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALE
AIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMA
EIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG
LDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL"
misc_feature 2364137..2365264
/gene="nrdB"
/locus_tag="SF2317"
/note="ribonucleotide-diphosphate reductase subunit beta;
Reviewed; Region: nrdB; PRK09101"
/db_xref="CDD:181647"
misc_feature order(2364248..2364250,2364269..2364271,2364464..2364469,
2364476..2364478,2364485..2364490,2364497..2364499,
2364506..2364508,2364548..2364553,2364560..2364562)
/gene="nrdB"
/locus_tag="SF2317"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153108"
misc_feature order(2364281..2364283,2364389..2364391,2364482..2364484,
2364491..2364493,2364503..2364505,2364845..2364850,
2364860..2364862)
/gene="nrdB"
/locus_tag="SF2317"
/note="putative radical transfer pathway [active]"
/db_xref="CDD:153108"
misc_feature order(2364389..2364391,2364482..2364484,2364491..2364493,
2364749..2364751,2364851..2364853,2364860..2364862)
/gene="nrdB"
/locus_tag="SF2317"
/note="diiron center [ion binding]; other site"
/db_xref="CDD:153108"
misc_feature 2364503..2364505
/gene="nrdB"
/locus_tag="SF2317"
/note="tyrosyl radical; other site"
/db_xref="CDD:153108"
gene 2365267..2365521
/gene="yfaE"
/locus_tag="SF2318"
/db_xref="GeneID:1025503"
CDS 2365267..2365521
/gene="yfaE"
/locus_tag="SF2318"
/note="Code: C; COG: COG0633"
/codon_start=1
/transl_table=11
/product="2Fe-2S ferredoxin"
/protein_id="NP_708126.1"
/db_xref="GeneID:1025503"
/translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS
CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEL"
misc_feature 2365267..2365518
/gene="yfaE"
/locus_tag="SF2318"
/note="2Fe-2S ferredoxin-like protein; Region: PRK10713"
/db_xref="CDD:182668"
misc_feature order(2365363..2365368,2365375..2365377,2365384..2365386,
2365390..2365401,2365477..2365482)
/gene="yfaE"
/locus_tag="SF2318"
/note="catalytic loop [active]"
/db_xref="CDD:238126"
misc_feature order(2365375..2365377,2365390..2365392,2365399..2365401,
2365480..2365482)
/gene="yfaE"
/locus_tag="SF2318"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:238126"
gene complement(2365575..2366225)
/gene="inaA"
/locus_tag="SF2319"
/db_xref="GeneID:1025485"
CDS complement(2365575..2366225)
/gene="inaA"
/locus_tag="SF2319"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708127.1"
/db_xref="GeneID:1025485"
/translation="MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKL
YVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALL
VTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIY
VKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM"
misc_feature complement(2365578..2366225)
/gene="inaA"
/locus_tag="SF2319"
/note="lipopolysaccharide kinase InaA; Region: PRK09902"
/db_xref="CDD:182136"
gene 2366440..2366646
/gene="yfaH"
/locus_tag="SF2320"
/db_xref="GeneID:1025492"
CDS 2366440..2366646
/gene="yfaH"
/locus_tag="SF2320"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708128.1"
/db_xref="GeneID:1025492"
/translation="MNFIRQGLGIALQPELTLKSIAGELCSVPHEPTFYRQISLLTKE
KPVEGSPLFLLQMCMEQLVAIGKI"
misc_feature 2366440..2366643
/gene="yfaH"
/locus_tag="SF2320"
/note="hypothetical protein; Provisional; Region:
PRK09729"
/db_xref="CDD:182050"
gene complement(2366688..2367764)
/gene="glpQ"
/locus_tag="SF2321"
/db_xref="GeneID:1027255"
CDS complement(2366688..2367764)
/gene="glpQ"
/locus_tag="SF2321"
/note="Code: C; COG: COG0584"
/codon_start=1
/transl_table=11
/product="glycerophosphodiester phosphodiesterase"
/protein_id="NP_708129.2"
/db_xref="GeneID:1027255"
/translation="MKLKLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP
EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
KNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDAL
YNKAGVNGLFTDFPDKAVKFLNKE"
misc_feature complement(2366691..2367752)
/gene="glpQ"
/locus_tag="SF2321"
/note="glycerophosphodiester phosphodiesterase;
Provisional; Region: glpQ; PRK11143"
/db_xref="CDD:236859"
gene complement(2367769..2369127)
/gene="glpT"
/locus_tag="SF2322"
/db_xref="GeneID:1027252"
CDS complement(2367769..2369127)
/gene="glpT"
/locus_tag="SF2322"
/note="Code: G; COG: COG2271"
/codon_start=1
/transl_table=11
/product="sn-glycerol-3-phosphate transporter"
/protein_id="NP_708130.1"
/db_xref="GeneID:1027252"
/translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
RKNFALAMPYLVEQGFSRGDLRFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP
PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
PTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRN
GG"
misc_feature complement(2367772..2369127)
/gene="glpT"
/locus_tag="SF2322"
/note="glycerol-3-phosphate transporter; Region: glpT;
PRK11273"
/db_xref="CDD:236889"
gene 2369400..2371028
/gene="glpA"
/locus_tag="SF2323"
/db_xref="GeneID:1025493"
CDS 2369400..2371028
/gene="glpA"
/locus_tag="SF2323"
/note="Code: C; COG: COG0578"
/codon_start=1
/transl_table=11
/product="sn-glycerol-3-phosphate dehydrogenase subunit A"
/protein_id="NP_708131.2"
/db_xref="GeneID:1025493"
/translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP
AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
misc_feature 2369472..2371007
/gene="glpA"
/locus_tag="SF2323"
/note="anaerobic glycerol-3-phosphate dehydrogenase
subunit A; Region: glpA; PRK11101"
/db_xref="CDD:236847"
gene 2371018..2372277
/gene="glpB"
/locus_tag="SF2324"
/db_xref="GeneID:1026758"
CDS 2371018..2372277
/gene="glpB"
/locus_tag="SF2324"
/note="Code: E; COG: COG3075"
/codon_start=1
/transl_table=11
/product="anaerobic glycerol-3-phosphate dehydrogenase
subunit B"
/protein_id="NP_708132.2"
/db_xref="GeneID:1026758"
/translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
LDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQL
QGSVELAHQRITPLGTLRATWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR
ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI
LMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
DEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIRETILGLD
VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
QGCGGGVCAVSALHAAQQIAQRAGGQQ"
misc_feature 2371024..2372253
/gene="glpB"
/locus_tag="SF2324"
/note="glycerol-3-phosphate dehydrogenase, anaerobic, B
subunit; Region: glycerol3P_GlpB; TIGR03378"
/db_xref="CDD:213807"
gene 2372274..2373464
/gene="glpC"
/locus_tag="SF2325"
/db_xref="GeneID:1025483"
CDS 2372274..2373464
/gene="glpC"
/locus_tag="SF2325"
/note="Code: C; COG: COG0247"
/codon_start=1
/transl_table=11
/product="sn-glycerol-3-phosphate dehydrogenase subunit C"
/protein_id="NP_708133.2"
/db_xref="GeneID:1025483"
/translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYK
DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWC
KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAG
TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA
QALA"
misc_feature 2372280..2373461
/gene="glpC"
/locus_tag="SF2325"
/note="glycerol-3-phosphate dehydrogenase, anaerobic, C
subunit; Region: glycerol3P_GlpC; TIGR03379"
/db_xref="CDD:132422"
gene 2373657..2374607
/gene="yfaD"
/locus_tag="SF2326"
/db_xref="GeneID:1025505"
CDS 2373657..2374607
/gene="yfaD"
/locus_tag="SF2326"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708134.1"
/db_xref="GeneID:1025505"
/translation="MTESTTSSPHDAVFKTFIFTPETARDFLEIHLPEPLRKLCNLQT
LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRPMRYATAA
MQSHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
IVPDDEIMQHRRIALLELIQKHIRDHDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
CGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLVGLQQGKLEGLQ
EGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH"
misc_feature 2373657..2374604
/gene="yfaD"
/locus_tag="SF2326"
/note="ISNCY family transposase; Region: PRK09956"
/db_xref="CDD:182167"
gene complement(2374648..2375118)
/locus_tag="SF2327"
/pseudo
/db_xref="GeneID:1025498"
misc_feature complement(2374648..2375118)
/locus_tag="SF2327"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788578 (268 aa). BLAST with
identity of 98% in 153 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2375173..2376375)
/locus_tag="SF2328"
/db_xref="GeneID:1023488"
CDS complement(2375173..2376375)
/locus_tag="SF2328"
/note="Code: R; COG: COG1058"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708135.1"
/db_xref="GeneID:1023488"
/translation="MLKVEMLSTGDEVLYGQIVDTNAAWLADFFFHQGLPLSRRNTVG
DNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMER
YFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVM
VEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPII
ELKLTGPASEQQAMEKLWLDVKRVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQF
TGGLLALQLSRAGAPLLACEVIPSQEETLAQTAHWITERRANHFAGLALAVSGFENEH
LNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEV
VESMTLSV"
misc_feature complement(2375188..2376375)
/locus_tag="SF2328"
/note="nicotinamide mononucleotide deamidase-related
protein YfaY; Region: PRK03673"
/db_xref="CDD:179629"
gene complement(2376462..2377004)
/locus_tag="SF2329"
/db_xref="GeneID:1027264"
CDS complement(2376462..2377004)
/locus_tag="SF2329"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708136.2"
/db_xref="GeneID:1027264"
/translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTEST
GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG
LQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK
DGNRDNAVADGLYVGVNASF"
misc_feature complement(2376465..2377004)
/locus_tag="SF2329"
/note="YfaZ precursor; Region: YfaZ; pfam07437"
/db_xref="CDD:284781"
gene 2377199..2377708
/gene="yfaO"
/locus_tag="SF2330"
/db_xref="GeneID:1027259"
CDS 2377199..2377708
/gene="yfaO"
/locus_tag="SF2330"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="nucleoside triphosphatase NudI"
/protein_id="NP_708137.3"
/db_xref="GeneID:1027259"
/translation="MQKRLLSLSHISELPYSHGFFLFIRNTPVRQRTIVCPLIQNDGA
YLLCKMADDRGVFPGQWALSGGGVESGERIEEALRREIREELGEQLLLTEITPWTFSD
DIRTKTYADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPEDLVHYDLNVATR
KTLRLKGLL"
misc_feature 2377283..2377705
/gene="yfaO"
/locus_tag="SF2330"
/note="nucleoside triphosphatase NudI; Provisional;
Region: PRK15472"
/db_xref="CDD:185369"
gene complement(2377747..2378325)
/gene="ais"
/locus_tag="SF2331"
/db_xref="GeneID:1027258"
CDS complement(2377747..2378325)
/gene="ais"
/locus_tag="SF2331"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide core heptose(II)-phosphate
phosphatase"
/protein_id="NP_708138.2"
/db_xref="GeneID:1027258"
/translation="MKSKKYFIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQ
HPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADISDFDLYSSNTVR
TIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKN
KRDAIFKPDYLDGLVMHVEKGKVYLDGEFVNH"
misc_feature complement(2377750..2378325)
/gene="ais"
/locus_tag="SF2331"
/note="lipopolysaccharide core heptose(II)-phosphate
phosphatase; Provisional; Region: PRK15416"
/db_xref="CDD:185314"
misc_feature complement(order(2377873..2377878,2378020..2378022,
2378167..2378172))
/gene="ais"
/locus_tag="SF2331"
/note="catalytic core [active]"
/db_xref="CDD:132716"
gene 2378690..2379796
/locus_tag="SF2332"
/db_xref="GeneID:1025891"
CDS 2378690..2379796
/locus_tag="SF2332"
/note="Code: M; COG: COG0399"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708139.4"
/db_xref="GeneID:1025891"
/translation="MGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVS
SATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEA
IESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAK
GTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEV
LTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHV
HAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNT
EWNSERICSLPLFPDMTTADADRVITALQQLAGQ"
misc_feature 2378690..2379793
/locus_tag="SF2332"
/note="UDP-4-amino-4-deoxy-L-arabinose aminotransferase;
Region: PRK11658"
/db_xref="CDD:183263"
misc_feature order(2378825..2378830,2379116..2379118,2379125..2379127,
2379185..2379187,2379197..2379202,2379623..2379625)
/locus_tag="SF2332"
/note="inhibitor-cofactor binding pocket [active]"
/db_xref="CDD:99740"
misc_feature order(2378825..2378830,2378900..2378902,2379116..2379118,
2379125..2379127,2379185..2379187,2379200..2379202)
/locus_tag="SF2332"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99740"
misc_feature 2379200..2379202
/locus_tag="SF2332"
/note="catalytic residue [active]"
/db_xref="CDD:99740"
gene 2379800..2380768
/locus_tag="SF2333"
/db_xref="GeneID:1027227"
CDS 2379800..2380768
/locus_tag="SF2333"
/note="Code: M; COG: COG0463"
/codon_start=1
/transl_table=11
/product="undecaprenyl phosphate
4-deoxy-4-formamido-L-arabinose transferase"
/protein_id="NP_708140.1"
/db_xref="GeneID:1027227"
/translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL
LIDDGSSDNSAHMLVEASQAENSHIVSILINRNYGQHSAIMAGFSHVTGDLIITLDAD
LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYG
CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLI
NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV
LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE"
misc_feature 2379806..2380762
/locus_tag="SF2333"
/note="undecaprenyl phosphate
4-deoxy-4-formamido-L-arabinose transferase; Provisional;
Region: PRK10714"
/db_xref="CDD:182669"
gene 2380768..2382749
/locus_tag="SF2334"
/pseudogene="unknown"
/db_xref="GeneID:1027289"
gene 2382746..2383636
/locus_tag="SF2335"
/db_xref="GeneID:1025486"
CDS 2382746..2383636
/locus_tag="SF2335"
/codon_start=1
/transl_table=11
/product="4-deoxy-4-formamido-L-arabinose-
phosphoundecaprenol deformylase ArnD"
/protein_id="NP_708142.1"
/db_xref="GeneID:1025486"
/translation="MTKVGLRIDVDAFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE
VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIE
AKEAFHLRYNSDCRGAIPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLL
NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
RGNIAGREGWLGCQQIAGSR"
misc_feature 2382746..2383618
/locus_tag="SF2335"
/note="4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol
deformylase ArnD; Provisional; Region: PRK15394"
/db_xref="CDD:185292"
gene 2383636..2385288
/gene="arnT"
/locus_tag="SF2336"
/db_xref="GeneID:1027765"
CDS 2383636..2385288
/gene="arnT"
/locus_tag="SF2336"
/note="Code: M; COG: COG1807"
/codon_start=1
/transl_table=11
/product="4-amino-4-deoxy-L-arabinose lipid A transferase"
/protein_id="NP_708143.2"
/db_xref="GeneID:1027765"
/translation="MKSVRYLIGIFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG
KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT
VLPWGLAIAQREPDFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFAPLAMLLAHYALLA
AKNNPLALRINGWINIAFGVTGIIATFVISPWGPMNTPVWQTFESYKVFCAWSIFSLW
AFFGWYTLTNVEKTWSFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
QEGIITLVLSVDRDEDINSLAIPPADAIVRQERLVLIQYRPK"
misc_feature 2383636..2385282
/gene="arnT"
/locus_tag="SF2336"
/note="lipid IV(A)
4-amino-4-deoxy-L-arabinosyltransferase; Region: arnT;
PRK13279"
/db_xref="CDD:237330"
gene 2385620..2386006
/locus_tag="SF2337"
/db_xref="GeneID:1027229"
CDS 2385620..2386006
/locus_tag="SF2337"
/codon_start=1
/transl_table=11
/product="4-amino-4-deoxy-L-arabinose-phospho-UDP
flippase"
/protein_id="NP_708144.4"
/db_xref="GeneID:1027229"
/translation="MCLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG
LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS
LKALLGVACIMSGLMLIFLPTTKQRY"
misc_feature 2385620..2386003
/locus_tag="SF2337"
/note="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
flippase subunit ArnF; Provisional; Region: PRK02971"
/db_xref="CDD:235094"
gene complement(2386000..2386272)
/gene="pmrD"
/locus_tag="SF2338"
/db_xref="GeneID:1027256"
CDS complement(2386000..2386272)
/gene="pmrD"
/locus_tag="SF2338"
/codon_start=1
/transl_table=11
/product="signal transduction protein PmrD"
/protein_id="NP_708145.1"
/db_xref="GeneID:1027256"
/translation="MQWNGWHKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKV
GDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCTAAGKTQ"
misc_feature complement(2386012..2386272)
/gene="pmrD"
/locus_tag="SF2338"
/note="signal transduction protein PmrD; Provisional;
Region: PRK15450"
/db_xref="CDD:185347"
gene complement(2386377..2387732)
/gene="menE"
/locus_tag="SF2339"
/db_xref="GeneID:1025478"
CDS complement(2386377..2387732)
/gene="menE"
/locus_tag="SF2339"
/note="Code: IQ; COG: COG0318"
/codon_start=1
/transl_table=11
/product="2-succinylbenzoate-CoA ligase"
/protein_id="NP_708146.1"
/db_xref="GeneID:1025478"
/translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELATGF
AAQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQF
ALVPDGENTFPALTSLHIQLVEGVHAAAWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS
TVCAKEADGLADVGLPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
RDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVSVADKEFGH
RPVAVVEYDQQTVDLGEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
Q"
misc_feature complement(2386380..2387732)
/gene="menE"
/locus_tag="SF2339"
/note="O-succinylbenzoic acid--CoA ligase; Provisional;
Region: PRK09029"
/db_xref="CDD:236363"
gene complement(2387729..2388691)
/gene="menC"
/locus_tag="SF2340"
/db_xref="GeneID:1025521"
CDS complement(2387729..2388691)
/gene="menC"
/locus_tag="SF2340"
/note="Code: H; COG: COG1441"
/codon_start=1
/transl_table=11
/product="O-succinylbenzoate synthase"
/protein_id="NP_708147.1"
/db_xref="GeneID:1025521"
/translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
ISPLPGFSQENWEEAQSVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELTDTLPQAA
NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
DANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLAR
IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSPLPLVDADVQEQLL"
misc_feature complement(2387732..2388691)
/gene="menC"
/locus_tag="SF2340"
/note="O-succinylbenzoate synthase; Provisional; Region:
PRK05105"
/db_xref="CDD:235345"
gene complement(2388691..2389548)
/gene="menB"
/locus_tag="SF2341"
/db_xref="GeneID:1025489"
CDS complement(2388691..2389548)
/gene="menB"
/locus_tag="SF2341"
/note="Code: H; COG: COG0447"
/codon_start=1
/transl_table=11
/product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
/protein_id="NP_708148.1"
/db_xref="GeneID:1025489"
/translation="MIYPDEAMPYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
RNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
DFSKFKRNP"
misc_feature complement(2388694..2389521)
/gene="menB"
/locus_tag="SF2341"
/note="dihydroxynaphthoic acid synthetase; Validated;
Region: PRK07396"
/db_xref="CDD:180958"
misc_feature complement(order(2389072..2389074,2389081..2389086,
2389150..2389158,2389162..2389164,2389285..2389299,
2389309..2389311,2389408..2389410,2389414..2389416))
/gene="menB"
/locus_tag="SF2341"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature complement(order(2389150..2389152,2389291..2389293))
/gene="menB"
/locus_tag="SF2341"
/note="oxyanion hole (OAH) forming residues [active]"
/db_xref="CDD:119339"
misc_feature complement(order(2388886..2388891,2388898..2388900,
2388943..2388945,2388952..2388954,2388985..2388987,
2388994..2388999,2389003..2389008,2389012..2389017,
2389030..2389035,2389039..2389047,2389051..2389053,
2389069..2389080,2389114..2389125,2389186..2389188,
2389210..2389212))
/gene="menB"
/locus_tag="SF2341"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene complement(2389563..2390321)
/gene="yfbB"
/locus_tag="SF2342"
/db_xref="GeneID:1027241"
CDS complement(2389563..2390321)
/gene="yfbB"
/locus_tag="SF2342"
/note="Code: R; COG: COG0596"
/codon_start=1
/transl_table=11
/product="2-succinyl-6-hydroxy-2,
4-cyclohexadiene-1-carboxylate synthase"
/protein_id="NP_708149.1"
/db_xref="GeneID:1027241"
/translation="MILHAQAKHGKLGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
VDLLGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAG
LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQRFRTEPLTAVFADWYQQPVFASLNDDQ
RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
misc_feature complement(2389566..2390285)
/gene="yfbB"
/locus_tag="SF2342"
/note="2-succinyl-6-hydroxy-2,
4-cyclohexadiene-1-carboxylate synthase; Provisional;
Region: PRK11126"
/db_xref="CDD:236855"
gene complement(2390318..2391988)
/gene="menD"
/locus_tag="SF2343"
/db_xref="GeneID:1027240"
CDS complement(2390318..2391988)
/gene="menD"
/locus_tag="SF2343"
/note="Code: H; COG: COG1165"
/codon_start=1
/transl_table=11
/product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
cyclohexene-1-carboxylate synthase"
/protein_id="NP_708150.2"
/db_xref="GeneID:1027240"
/translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWR
QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSL
VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
HHPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL"
misc_feature complement(2390321..2391985)
/gene="menD"
/locus_tag="SF2343"
/note="2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
carboxylate synthase [Coenzyme transport and metabolism];
Region: MenD; COG1165"
/db_xref="CDD:440779"
gene complement(2392077..2393147)
/gene="menF"
/locus_tag="SF2344"
/db_xref="GeneID:1027236"
CDS complement(2392077..2393147)
/gene="menF"
/locus_tag="SF2344"
/note="Code: HQ; COG: COG1169"
/codon_start=1
/transl_table=11
/product="isochorismate hydroxymutase 2"
/protein_id="NP_708151.4"
/db_xref="GeneID:1027236"
/translation="MDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEWRRCGG
KATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWPDKTGWTQLIE
LATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFL
GSSPERLWRRRDKALRTEALAGTVANHPDDKQAQQLGEWLMADDKNQRENMLVVEDIC
QRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVICLHQLQPTAAVAGLPRD
LARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKISGNVVRLYAGAGIVRGSD
PEQEWQEIDNKAAGLRTLLQME"
misc_feature complement(2392080..2393147)
/gene="menF"
/locus_tag="SF2344"
/note="menaquinone-specific isochorismate synthase;
Provisional; Region: PRK15012"
/db_xref="CDD:184974"
gene complement(2393451..2393756)
/gene="elaB"
/locus_tag="SF2345"
/db_xref="GeneID:1025525"
CDS complement(2393451..2393756)
/gene="elaB"
/locus_tag="SF2345"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708152.1"
/db_xref="GeneID:1025525"
/translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKAHAE
KALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
misc_feature complement(2393454..2393756)
/gene="elaB"
/locus_tag="SF2345"
/note="stress response protein ElaB; Region: PRK10404"
/db_xref="CDD:182432"
gene complement(2393811..2394272)
/gene="elaA"
/locus_tag="SF2346"
/db_xref="GeneID:1026561"
CDS complement(2393811..2394272)
/gene="elaA"
/locus_tag="SF2346"
/note="Code: R; COG: COG2153"
/codon_start=1
/transl_table=11
/product="acyltransferase"
/protein_id="NP_708153.1"
/db_xref="GeneID:1026561"
/translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLET
CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
misc_feature complement(2393814..2394272)
/gene="elaA"
/locus_tag="SF2346"
/note="GNAT family N-acetyltransferase; Region: PRK10314"
/db_xref="CDD:182373"
misc_feature complement(order(2393994..2393999,2394027..2394035))
/gene="elaA"
/locus_tag="SF2346"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 2394319..2395254
/gene="elaC"
/locus_tag="SF2347"
/db_xref="GeneID:1025507"
CDS 2394319..2395254
/gene="elaC"
/locus_tag="SF2347"
/note="Code: R; COG: COG1234"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708154.3"
/db_xref="GeneID:1025507"
/translation="MKRDELMELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFD
CGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQG
IREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHD
KPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGD
TGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITH
VSSRYDDKGCQHLLRECRSIFPATELANDFTVFNV"
misc_feature 2394343..2395251
/gene="elaC"
/locus_tag="SF2347"
/note="ribonuclease BN; Region: true_RNase_BN; TIGR02649"
/db_xref="CDD:131697"
misc_feature order(2394448..2394450,2394523..2394528,2394532..2394534,
2394538..2394543,2394757..2394762,2394970..2394972,
2395030..2395032,2395144..2395146)
/gene="elaC"
/locus_tag="SF2347"
/note="putative active site [active]"
/db_xref="CDD:293803"
mobile_element 2395635..2396402
/mobile_element_type="insertion sequence:IS1"
gene 2395690..2395965
/gene="insA"
/locus_tag="SF2348"
/db_xref="GeneID:1025523"
CDS 2395690..2395965
/gene="insA"
/locus_tag="SF2348"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708155.1"
/db_xref="GeneID:1025523"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2395711..>2395962
/gene="insA"
/locus_tag="SF2348"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2395992..2396387
/gene="insB"
/locus_tag="SF2349"
/db_xref="GeneID:1027243"
CDS 2395992..2396387
/gene="insB"
/locus_tag="SF2349"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708156.1"
/db_xref="GeneID:1027243"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLKLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 2395995..2396384
/gene="insB"
/locus_tag="SF2349"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 2397028..2397667
/gene="yfbL"
/locus_tag="SF2350"
/pseudo
/db_xref="GeneID:1026760"
misc_feature 2397028..2397667
/gene="yfbL"
/locus_tag="SF2350"
/note="Similar to Escherichia coli K12 aminopeptidase gi:
1788607 (326 aa). BLAST with identity of 96% in 213 aa.
This CDS contains deletion. The sequence has been checked
and is believed to be correct."
/pseudo
gene 2397770..2398093
/gene="yfbM"
/locus_tag="SF2351"
/db_xref="GeneID:1025514"
CDS 2397770..2398093
/gene="yfbM"
/locus_tag="SF2351"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708157.1"
/db_xref="GeneID:1025514"
/translation="MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLESLD
RSELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHAL
TVIVG"
misc_feature 2397770..2398081
/gene="yfbM"
/locus_tag="SF2351"
/note="Domain of unknown function (DUF1877); Region:
DUF1877; pfam08974"
/db_xref="CDD:430350"
gene complement(2398160..2399437)
/gene="nuoN"
/locus_tag="SF2352"
/db_xref="GeneID:1027239"
CDS complement(2398160..2399437)
/gene="nuoN"
/locus_tag="SF2352"
/note="Code: C; COG: COG1007"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase I subunit N"
/protein_id="NP_708158.4"
/db_xref="GeneID:1027239"
/translation="MDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDE
FYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTIL
SAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGMMIVGLGFKLSL
VPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAF
ASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFS
SLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIG
KFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSA
GGIVVLISALLVLVLGVWPQPLISIVRLAMPLM"
misc_feature complement(2398169..2399437)
/gene="nuoN"
/locus_tag="SF2352"
/note="NADH-quinone oxidoreductase subunit NuoN; Region:
PRK05777"
/db_xref="CDD:235603"
gene complement(2399624..2401153)
/gene="nuoM"
/locus_tag="SF2353"
/db_xref="GeneID:1025519"
CDS complement(2399624..2401153)
/gene="nuoM"
/locus_tag="SF2353"
/note="Code: C; COG: COG1008"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit M"
/protein_id="NP_708159.1"
/db_xref="GeneID:1025519"
/translation="MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSL
QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG
VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
PLFPNASAEFAPIAMWLGVIGIFYGAWMTFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
P"
misc_feature complement(2399627..2401153)
/gene="nuoM"
/locus_tag="SF2353"
/note="NADH:ubiquinone oxidoreductase subunit M; Reviewed;
Region: PRK05846"
/db_xref="CDD:235622"
gene complement(2401317..2403158)
/gene="nuoL"
/locus_tag="SF2354"
/db_xref="GeneID:1025512"
CDS complement(2401317..2403158)
/gene="nuoL"
/locus_tag="SF2354"
/note="Code: CP; COG: COG1009"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit L"
/protein_id="NP_708160.1"
/db_xref="GeneID:1025512"
/translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
TAFIGVDFFANGEQAYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFRDMVELAPAHFADGNNMLMWA
TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLV
TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
VTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLA
AWLWLGKRSLVTSIANSAPGRLLSTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
misc_feature complement(2401356..2403158)
/gene="nuoL"
/locus_tag="SF2354"
/note="NADH:ubiquinone oxidoreductase subunit L; Reviewed;
Region: PRK06590"
/db_xref="CDD:235836"
gene complement(2403155..2403457)
/gene="nuoK"
/locus_tag="SF2355"
/db_xref="GeneID:1025502"
CDS complement(2403155..2403457)
/gene="nuoK"
/locus_tag="SF2355"
/note="Code: C; COG: COG0713"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit K"
/protein_id="NP_708161.1"
/db_xref="GeneID:1025502"
/translation="MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
misc_feature complement(2403158..2403457)
/gene="nuoK"
/locus_tag="SF2355"
/note="NADH-quinone oxidoreductase subunit NuoK; Region:
PRK05715"
/db_xref="CDD:180218"
gene complement(2403454..2404008)
/gene="nuoJ"
/locus_tag="SF2356"
/db_xref="GeneID:1027237"
CDS complement(2403454..2404008)
/gene="nuoJ"
/locus_tag="SF2356"
/note="Code: C; COG: COG0839"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit J"
/protein_id="NP_708162.1"
/db_xref="GeneID:1027237"
/translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
EERAGEVLSNRKDDSAKRKTEEHA"
misc_feature complement(2403460..2404008)
/gene="nuoJ"
/locus_tag="SF2356"
/note="NADH-quinone oxidoreductase subunit J; Region:
PRK06638"
/db_xref="CDD:235844"
gene complement(2404020..2404562)
/gene="nuoI"
/locus_tag="SF2357"
/db_xref="GeneID:1025516"
CDS complement(2404020..2404562)
/gene="nuoI"
/locus_tag="SF2357"
/note="Code: C; COG: COG1143"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase subunit I"
/protein_id="NP_708163.1"
/db_xref="GeneID:1025516"
/translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
KDKGEAENEAKPIDVKSLLP"
misc_feature complement(2404110..2404562)
/gene="nuoI"
/locus_tag="SF2357"
/note="NADH-quinone oxidoreductase subunit NuoI; Region:
PRK05888"
/db_xref="CDD:235637"
gene complement(2404577..2405554)
/gene="nuoH"
/locus_tag="SF2358"
/db_xref="GeneID:1027245"
CDS complement(2404577..2405554)
/gene="nuoH"
/locus_tag="SF2358"
/note="Code: C; COG: COG1005"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit H"
/protein_id="NP_708164.1"
/db_xref="GeneID:1027245"
/translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
QELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTA
FFMMMFILIRASLPRPRYDRVMSFGWKICLPLTLINLLVTAAVILWQAQ"
misc_feature complement(2404598..2405554)
/gene="nuoH"
/locus_tag="SF2358"
/note="NADH-quinone oxidoreductase subunit NuoH; Region:
PRK06076"
/db_xref="CDD:235692"
gene complement(2405551..2408277)
/gene="nuoG"
/locus_tag="SF2359"
/db_xref="GeneID:1025539"
CDS complement(2405551..2408277)
/gene="nuoG"
/locus_tag="SF2359"
/note="Code: C; COG: COG1034"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase subunit G"
/protein_id="NP_708165.2"
/db_xref="GeneID:1025539"
/translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
VEDQARLGFAIAHALDNSAPAVDGIEPELQNKIDVIVQALAGAKKPLIISGTNAGSIE
VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
LENDLHRYASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSSASFAESDGTVINNE
GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
misc_feature complement(2406313..2408268)
/gene="nuoG"
/locus_tag="SF2359"
/note="NADH-quinone oxidoreductase, chain G; Region: NuoG;
TIGR01973"
/db_xref="CDD:273904"
misc_feature complement(2405617..2405850)
/gene="nuoG"
/locus_tag="SF2359"
/note="C-terminal region of the NuoG-like subunit (of the
variant with a [4Fe-4S] cluster, N7) of the NADH-quinone
oxidoreductase/NADH dehydrogenase-1 (NDH-1) found in
various bacteria. The NDH-1 is the first
energy-transducting complex in the respiratory chain...;
Region: MopB_CT_NDH-1_NuoG2-N7; cd02788"
/db_xref="CDD:239189"
gene complement(2408330..2409667)
/gene="nuoF"
/locus_tag="SF2360"
/db_xref="GeneID:1026762"
CDS complement(2408330..2409667)
/gene="nuoF"
/locus_tag="SF2360"
/note="Code: C; COG: COG1894"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase I subunit F"
/protein_id="NP_708166.1"
/db_xref="GeneID:1026762"
/translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
misc_feature complement(2408333..2409667)
/gene="nuoF"
/locus_tag="SF2360"
/note="NADH-quinone oxidoreductase subunit NuoF; Region:
PRK11278"
/db_xref="CDD:236891"
gene complement(2409664..2410164)
/gene="nuoE"
/locus_tag="SF2361"
/db_xref="GeneID:1027235"
CDS complement(2409664..2410164)
/gene="nuoE"
/locus_tag="SF2361"
/note="Code: C; COG: COG1905"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase subunit E"
/protein_id="NP_708167.1"
/db_xref="GeneID:1027235"
/translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
LLERYK"
misc_feature complement(2409667..2410125)
/gene="nuoE"
/locus_tag="SF2361"
/note="NADH-quinone oxidoreductase subunit NuoE; Region:
PRK07539"
/db_xref="CDD:181024"
misc_feature complement(order(2409769..2409777,2409895..2409897,
2409901..2409903))
/gene="nuoE"
/locus_tag="SF2361"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:239362"
misc_feature complement(order(2409754..2409756,2409766..2409768,
2409874..2409876,2409889..2409891))
/gene="nuoE"
/locus_tag="SF2361"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:239362"
gene complement(2410167..2411969)
/gene="nuoC"
/locus_tag="SF2362"
/db_xref="GeneID:1025540"
CDS complement(2410167..2411969)
/gene="nuoC"
/locus_tag="SF2362"
/note="Code: C; COG: COG0649"
/codon_start=1
/transl_table=11
/product="bifunctional NADH:ubiquinone oxidoreductase
subunit C/D"
/protein_id="NP_708168.1"
/db_xref="GeneID:1025540"
/translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSY
AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
misc_feature complement(2410170..2411897)
/gene="nuoC"
/locus_tag="SF2362"
/note="bifunctional NADH:ubiquinone oxidoreductase subunit
C/D; Provisional; Region: PRK11742"
/db_xref="CDD:236965"
gene complement(2412063..2412725)
/gene="nuoB"
/locus_tag="SF2363"
/db_xref="GeneID:1027233"
CDS complement(2412063..2412725)
/gene="nuoB"
/locus_tag="SF2363"
/note="Code: C; COG: COG0377"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase subunit B"
/protein_id="NP_708169.1"
/db_xref="GeneID:1027233"
/translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
EI"
misc_feature complement(2412066..2412674)
/gene="nuoB"
/locus_tag="SF2363"
/note="NADH-quinone oxidoreductase subunit NuoB; Region:
PRK06411"
/db_xref="CDD:235797"
gene complement(2412741..2413184)
/gene="nuoA"
/locus_tag="SF2364"
/db_xref="GeneID:1025504"
CDS complement(2412741..2413184)
/gene="nuoA"
/locus_tag="SF2364"
/note="Code: C; COG: COG0838"
/codon_start=1
/transl_table=11
/product="NADH:ubiquinone oxidoreductase subunit A"
/protein_id="NP_708170.1"
/db_xref="GeneID:1025504"
/translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
misc_feature complement(2412807..2413169)
/gene="nuoA"
/locus_tag="SF2364"
/note="NADH:ubiquinone oxidoreductase subunit A;
Validated; Region: PRK06602"
/db_xref="CDD:180638"
gene complement(2413816..2414754)
/gene="lrhA"
/locus_tag="SF2365"
/db_xref="GeneID:1025506"
CDS complement(2413816..2414754)
/gene="lrhA"
/locus_tag="SF2365"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor LrhA"
/protein_id="NP_708171.1"
/db_xref="GeneID:1025506"
/translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKVDIPWRLAYV
ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
misc_feature complement(2413825..2414754)
/gene="lrhA"
/locus_tag="SF2365"
/note="DNA-binding transcriptional repressor LrhA;
Provisional; Region: PRK15092"
/db_xref="CDD:237907"
gene 2415673..2416890
/locus_tag="SF2366"
/db_xref="GeneID:1027308"
CDS 2415673..2416890
/locus_tag="SF2366"
/note="Code: E; COG: COG0436"
/codon_start=1
/transl_table=11
/product="aminotransferase"
/protein_id="NP_708172.1"
/db_xref="GeneID:1027308"
/translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
SKFARFLSGYHQL"
misc_feature 2415673..2416884
/locus_tag="SF2366"
/note="aminotransferase AlaT; Validated; Region: PRK09265"
/db_xref="CDD:181738"
gene 2416974..2417573
/locus_tag="SF2367"
/db_xref="GeneID:1025547"
CDS 2416974..2417573
/locus_tag="SF2367"
/note="Code: R; COG: COG1896"
/codon_start=1
/transl_table=11
/product="5'-deoxynucleotidase"
/protein_id="NP_708173.1"
/db_xref="GeneID:1025547"
/translation="MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHAL
AAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNAQIAQEYKAIEKIAQQ
KLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAK
TRLEATLEARRSQEMDYFMEVFVPSFHLSLDEISQDSPL"
misc_feature 2416977..2417561
/locus_tag="SF2367"
/note="5'-nucleotidase; Provisional; Region: PRK03826"
/db_xref="CDD:235165"
misc_feature 2417178..2417180
/locus_tag="SF2367"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:238032"
gene complement(2417632..2419464)
/gene="yfbS"
/locus_tag="SF2368"
/db_xref="GeneID:1025537"
CDS complement(2417632..2419464)
/gene="yfbS"
/locus_tag="SF2368"
/note="Code: P; COG: COG0471"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708174.1"
/db_xref="GeneID:1025537"
/translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
AGLGAFMSSTSVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
VNSELLREGYHGFSFFSVTPIGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTNEIPNPVAAIIACLLM
GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
misc_feature complement(2417635..2419284)
/gene="yfbS"
/locus_tag="SF2368"
/note="Di- and tricarboxylate antiporter [Carbohydrate
transport and metabolism]; Region: CitT; COG0471"
/db_xref="CDD:440239"
misc_feature complement(2418598..>2418825)
/gene="yfbS"
/locus_tag="SF2368"
/note="K+/H+ antiporter KhtSTU, c-di-AMP-binding
regulatory subunit KhtT, contains RCK_C (TrkA_C) domain
[Inorganic ion transport and metabolism, Signal
transduction mechanisms]; Region: KhtT; COG0490"
/db_xref="CDD:440256"
misc_feature complement(2418280..>2418555)
/gene="yfbS"
/locus_tag="SF2368"
/note="K+/H+ antiporter KhtSTU, c-di-AMP-binding
regulatory subunit KhtT, contains RCK_C (TrkA_C) domain
[Inorganic ion transport and metabolism, Signal
transduction mechanisms]; Region: KhtT; COG0490"
/db_xref="CDD:440256"
gene complement(2419551..2420201)
/gene="yfbT"
/locus_tag="SF2369"
/db_xref="GeneID:1025526"
CDS complement(2419551..2420201)
/gene="yfbT"
/locus_tag="SF2369"
/note="Code: R; COG: COG0637"
/codon_start=1
/transl_table=11
/product="phosphatase"
/protein_id="NP_708175.1"
/db_xref="GeneID:1025526"
/translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH
GKQAITSLRHFMAGKSEADIAAEFTRLEQIEATETEGITALPGAIALLNHLNKAGIPW
AIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV
VEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ"
misc_feature complement(2419554..2420201)
/gene="yfbT"
/locus_tag="SF2369"
/note="putative phosphatase; Provisional; Region:
PRK11587"
/db_xref="CDD:183215"
gene complement(2420212..2420706)
/locus_tag="SF2370"
/db_xref="GeneID:1027316"
CDS complement(2420212..2420706)
/locus_tag="SF2370"
/note="Code: S; COG: COG3013"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708176.1"
/db_xref="GeneID:1027316"
/translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
RELDREFGELKEETCRTIIDIMDMYHALYVSWSNLQDQQSIDERRVTFLGFDAATEAR
YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQ
IINA"
misc_feature complement(2420215..2420706)
/locus_tag="SF2370"
/note="YfbU family protein; Region: PRK05445"
/db_xref="CDD:180087"
gene complement(2420789..2421244)
/locus_tag="SF2371"
/db_xref="GeneID:1025538"
CDS complement(2420789..2421244)
/locus_tag="SF2371"
/note="Code: S; COG: COG3092"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708177.1"
/db_xref="GeneID:1025538"
/translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
RYAIRFMPPIAVFTLCWQIALGGLLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
misc_feature complement(2420792..2421220)
/locus_tag="SF2371"
/note="hypothetical protein; Provisional; Region:
PRK01816"
/db_xref="CDD:179338"
gene 2421582..2422784
/gene="ackA"
/locus_tag="SF2372"
/db_xref="GeneID:1027226"
CDS 2421582..2422784
/gene="ackA"
/locus_tag="SF2372"
/note="Code: C; COG: COG0282"
/codon_start=1
/transl_table=11
/product="acetate kinase A/propionate kinase 2"
/protein_id="NP_708178.2"
/db_xref="GeneID:1027226"
/translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVAFTGGI
GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
QDASRLTA"
misc_feature 2421591..2422778
/gene="ackA"
/locus_tag="SF2372"
/note="acetate kinase A/propionate kinase 2; Reviewed;
Region: PRK00180"
/db_xref="CDD:234680"
gene 2422859..2425003
/gene="pta"
/locus_tag="SF2373"
/db_xref="GeneID:1027244"
CDS 2422859..2425003
/gene="pta"
/locus_tag="SF2373"
/codon_start=1
/transl_table=11
/product="phosphate acetyltransferase"
/protein_id="NP_708179.1"
/db_xref="GeneID:1027244"
/translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG
GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
NTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
misc_feature 2422859..2424991
/gene="pta"
/locus_tag="SF2373"
/note="phosphate acetyltransferase; Reviewed; Region:
PRK05632"
/db_xref="CDD:235537"
gene 2425172..2426713
/gene="yfcC"
/locus_tag="SF2374"
/db_xref="GeneID:1025535"
CDS 2425172..2426713
/gene="yfcC"
/locus_tag="SF2374"
/note="Code: S; COG: COG1288"
/codon_start=1
/transl_table=11
/product="S-transferase"
/protein_id="NP_708180.4"
/db_xref="GeneID:1025535"
/translation="MQGNICAMSAIIESKPTRRWAMPDTLVIIFFVAILTSLATWVVP
VGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNF
PFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPA
LFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNP
FCVVVAQGIAGVPVLSGSGLRIVVWVIATLIGLIFTMVYASRVKKNPLLSRVHESDRF
FREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGI
IGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGNASVLNTIL
NSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVT
VLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQ
LMGYH"
misc_feature 2425193..2426710
/gene="yfcC"
/locus_tag="SF2374"
/note="putative basic amino acid antiporter YfcC; Region:
PRK11588"
/db_xref="CDD:236934"
gene complement(2426746..2427288)
/locus_tag="SF2375"
/db_xref="GeneID:1026560"
CDS complement(2426746..2427288)
/locus_tag="SF2375"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="NUDIX hydrolase YfcD"
/protein_id="NP_708181.1"
/db_xref="GeneID:1026560"
/translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSGVCWLTPEEITARCDEFTPDSLKA
LALWMKRNAKNEAVETETAE"
misc_feature complement(2426749..2427288)
/locus_tag="SF2375"
/note="NUDIX hydrolase YfcD; Provisional; Region:
PRK15393"
/db_xref="CDD:185291"
gene complement(2427346..2427897)
/gene="yfcE"
/locus_tag="SF2376"
/db_xref="GeneID:1027305"
CDS complement(2427346..2427897)
/gene="yfcE"
/locus_tag="SF2376"
/note="Code: R; COG: COG0622"
/codon_start=1
/transl_table=11
/product="phosphodiesterase"
/protein_id="NP_708182.2"
/db_xref="GeneID:1027305"
/translation="MKLMFASDIHGSLPATERVVELFVQSGAQWLVILGDVLNHGPRN
ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMMLHFPITAPWQQVLLEKQRLFL
THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPAGYGML
DNDVLSVIALNDQSIIAQVAINP"
misc_feature complement(2427352..2427897)
/gene="yfcE"
/locus_tag="SF2376"
/note="phosphodiesterase; Provisional; Region: PRK09453"
/db_xref="CDD:181869"
misc_feature complement(order(2427514..2427516,2427520..2427522,
2427586..2427588,2427679..2427684,2427790..2427792,
2427868..2427870,2427874..2427876))
/gene="yfcE"
/locus_tag="SF2376"
/note="active site"
/db_xref="CDD:277320"
misc_feature complement(order(2427514..2427516,2427520..2427522,
2427586..2427588,2427682..2427684,2427790..2427792,
2427868..2427870,2427874..2427876))
/gene="yfcE"
/locus_tag="SF2376"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:277320"
misc_feature complement(order(2427580..2427582,2427601..2427636,
2427676..2427690,2427697..2427699,2427808..2427813))
/gene="yfcE"
/locus_tag="SF2376"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:277320"
gene complement(2427953..2428597)
/gene="yfcF"
/locus_tag="SF2377"
/db_xref="GeneID:1025511"
CDS complement(2427953..2428597)
/gene="yfcF"
/locus_tag="SF2377"
/note="Code: O; COG: COG0625"
/codon_start=1
/transl_table=11
/product="glutathione S-transferase"
/protein_id="NP_708183.1"
/db_xref="GeneID:1025511"
/translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE
HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA
RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNL
FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG"
misc_feature complement(2427956..2428597)
/gene="yfcF"
/locus_tag="SF2377"
/note="glutathione transferase; Region: PRK15113"
/db_xref="CDD:185068"
gene 2428733..2429380
/gene="yfcG"
/locus_tag="SF2378"
/db_xref="GeneID:1026763"
CDS 2428733..2429380
/gene="yfcG"
/locus_tag="SF2378"
/note="Code: O; COG: COG0625"
/codon_start=1
/transl_table=11
/product="GSH-dependent disulfide bond oxidoreductase"
/protein_id="NP_708184.1"
/db_xref="GeneID:1026763"
/translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL
RISPNNKIPAIVDHSPADGGEPLSLFESAAILLYLAEKTGLFLSHETRERAATLQWLF
WQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS
IADIACWPWVNAWTRLRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS"
misc_feature 2428733..2429377
/gene="yfcG"
/locus_tag="SF2378"
/note="GSH-dependent disulfide bond oxidoreductase;
Provisional; Region: PRK13972"
/db_xref="CDD:172475"
gene 2429437..2429799
/gene="folX"
/locus_tag="SF2379"
/db_xref="GeneID:1027228"
CDS 2429437..2429799
/gene="folX"
/locus_tag="SF2379"
/note="Code: H; COG: COG1539"
/codon_start=1
/transl_table=11
/product="D-erythro-7,8-dihydroneopterin triphosphate
2'-epimerase"
/protein_id="NP_708185.1"
/db_xref="GeneID:1027228"
/translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
LHALRYADSVSMTLSWQR"
misc_feature 2429437..2429796
/gene="folX"
/locus_tag="SF2379"
/note="dihydroneopterin triphosphate 2'-epimerase; Region:
folX; PRK11245"
/db_xref="CDD:183053"
misc_feature order(2429452..2429484,2429500..2429526,2429746..2429751,
2429758..2429784)
/gene="folX"
/locus_tag="SF2379"
/note="homooctamer interface [polypeptide binding]; other
site"
/db_xref="CDD:238298"
misc_feature order(2429494..2429502,2429509..2429511,2429656..2429667,
2429740..2429742,2429776..2429778)
/gene="folX"
/locus_tag="SF2379"
/note="active site"
/db_xref="CDD:238298"
gene 2429820..2430713
/locus_tag="SF2380"
/db_xref="GeneID:1027238"
CDS 2429820..2430713
/locus_tag="SF2380"
/note="Code: R; COG: COG1090"
/codon_start=1
/transl_table=11
/product="sugar nucleotide epimerase"
/protein_id="NP_708186.1"
/db_xref="GeneID:1027238"
/translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHKQKERLCQSRWNITQKLVDLINAS
DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
LRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRG
PFNMVSPYPVRNEQFAHALGHALHRPAILRVPTTAIRLLMGESSVLVLGGQRALPKRL
EEAGFAFRWYDLEEALADVVR"
misc_feature 2429823..2430710
/locus_tag="SF2380"
/note="NAD dependent epimerase/dehydratase family enzyme
[General function prediction only]; Region: YfcH; COG1090"
/db_xref="CDD:440707"
gene complement(2430761..2431651)
/gene="yfcI"
/locus_tag="SF2381"
/db_xref="GeneID:1027263"
CDS complement(2430761..2431651)
/gene="yfcI"
/locus_tag="SF2381"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708187.1"
/db_xref="GeneID:1027263"
/translation="MTISTTSTPHDAVFKSFLRHPDTARNFINIHLPAPLRKLCDLTT
LKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
MQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDIT
VVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQ
TGDAQRFRAFIGEITERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQEMLDRGLD
RELVMMVTRLSPDDLIAQSH"
misc_feature complement(2430764..2431651)
/gene="yfcI"
/locus_tag="SF2381"
/note="recombination-promoting nuclease RpnA; Region:
PRK09857"
/db_xref="CDD:182117"
gene complement(2431848..2432621)
/gene="hisP"
/locus_tag="SF2382"
/db_xref="GeneID:1027232"
CDS complement(2431848..2432621)
/gene="hisP"
/locus_tag="SF2382"
/note="Code: E; COG: COG1126"
/codon_start=1
/transl_table=11
/product="histidine/lysine/arginine/ornithine ABC
transporter ATP-binding protein"
/protein_id="NP_708188.1"
/db_xref="GeneID:1027232"
/translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
LWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
misc_feature complement(2431851..2432621)
/gene="hisP"
/locus_tag="SF2382"
/note="histidine ABC transporter ATP-binding protein HisP;
Region: PRK10619"
/db_xref="CDD:182592"
gene complement(2432629..2433345)
/gene="hisM"
/locus_tag="SF2383"
/db_xref="GeneID:1025532"
CDS complement(2432629..2433345)
/gene="hisM"
/locus_tag="SF2383"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="histidine/lysine/arginine/ornithine ABC
transporter permease HisM"
/protein_id="NP_708189.1"
/db_xref="GeneID:1025532"
/translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGL
NCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIAL
PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
SLFRRAEKRWLQHVKPSSTH"
misc_feature complement(2432644..2433345)
/gene="hisM"
/locus_tag="SF2383"
/note="histidine ABC transporter permease HisM; Region:
PRK15069"
/db_xref="CDD:185029"
misc_feature complement(order(2432692..2432694,2432701..2432706,
2432713..2432718,2432722..2432727,2432734..2432739,
2432767..2432772,2432809..2432814,2432821..2432832,
2432851..2432853,2432860..2432865,2432905..2432907,
2432956..2432958,2432965..2432970,2432980..2432982,
2432986..2432991,2432998..2433000,2433004..2433006,
2433010..2433015,2433109..2433111,2433115..2433120,
2433127..2433156,2433160..2433171,2433199..2433201,
2433214..2433219,2433226..2433231))
/gene="hisM"
/locus_tag="SF2383"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(2432815..2432832,2433109..2433153))
/gene="hisM"
/locus_tag="SF2383"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(2432737..2432739,2432767..2432769,
2432776..2432778,2432812..2432814,2433028..2433030,
2433109..2433111))
/gene="hisM"
/locus_tag="SF2383"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(2432884..2432886,2432896..2432901,
2432917..2432955))
/gene="hisM"
/locus_tag="SF2383"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(2433342..2434028)
/gene="hisQ"
/locus_tag="SF2384"
/db_xref="GeneID:1027272"
CDS complement(2433342..2434028)
/gene="hisQ"
/locus_tag="SF2384"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="histidine/lysine/arginine/ornithine ABC
transporter permease HisQ"
/protein_id="NP_708190.1"
/db_xref="GeneID:1027272"
/translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
SGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNMVTEAMGVGQIDIDPMVAGIITLGF
IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
YSVGVKRADL"
misc_feature complement(2433345..2434028)
/gene="hisQ"
/locus_tag="SF2384"
/note="histidine ABC transporter permease HisQ; Region:
PRK15135"
/db_xref="CDD:185089"
misc_feature complement(order(2433411..2433416,2433423..2433428,
2433432..2433437,2433444..2433449,2433477..2433482,
2433519..2433524,2433531..2433542,2433561..2433563,
2433570..2433575,2433615..2433617,2433666..2433668,
2433675..2433680,2433690..2433692,2433696..2433701,
2433708..2433710,2433714..2433716,2433720..2433725,
2433822..2433824,2433828..2433833,2433840..2433869,
2433873..2433884,2433912..2433914,2433927..2433932,
2433939..2433944))
/gene="hisQ"
/locus_tag="SF2384"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(2433525..2433542,2433822..2433866))
/gene="hisQ"
/locus_tag="SF2384"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(2433447..2433449,2433477..2433479,
2433486..2433488,2433522..2433524,2433738..2433740,
2433822..2433824))
/gene="hisQ"
/locus_tag="SF2384"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(2433594..2433596,2433606..2433611,
2433627..2433665))
/gene="hisQ"
/locus_tag="SF2384"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(2434105..2434899)
/gene="hisJ"
/locus_tag="SF2385"
/db_xref="GeneID:1025550"
CDS complement(2434105..2434899)
/gene="hisJ"
/locus_tag="SF2385"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="histidine ABC transporter substrate-binding
protein HisJ"
/protein_id="NP_708191.1"
/db_xref="GeneID:1025550"
/translation="MKKLVLSLSLVLAFSSATAALAAIPQNIRIGTDPTYAPFESKNS
QGELVGFDIELAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
MGLRKEDNELREALNKAFAEMRADGTYEKLAKNTSILMFMVVNRHR"
misc_feature complement(2434108..2434863)
/gene="hisJ"
/locus_tag="SF2385"
/note="histidine ABC transporter substrate-binding protein
HisJ; Provisional; Region: PRK15437"
/db_xref="CDD:185334"
gene complement(2435120..2435902)
/gene="argT"
/locus_tag="SF2386"
/db_xref="GeneID:1027231"
CDS complement(2435120..2435902)
/gene="argT"
/locus_tag="SF2386"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="lysine/arginine/ornithine ABC transporter
substrate-binding protein"
/protein_id="NP_708192.1"
/db_xref="GeneID:1027231"
/translation="MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYALFSSKDA
KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG
VGLRKDYAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
misc_feature complement(2435123..2435902)
/gene="argT"
/locus_tag="SF2386"
/note="lysine/arginine/ornithine ABC transporter
substrate-binding protein ArgT; Region: PRK15010"
/db_xref="CDD:184972"
gene complement(2436168..2436737)
/gene="ubiX"
/locus_tag="SF2387"
/db_xref="GeneID:1024406"
CDS complement(2436168..2436737)
/gene="ubiX"
/locus_tag="SF2387"
/note="Code: H; COG: COG0163"
/codon_start=1
/transl_table=11
/product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase"
/protein_id="NP_708193.1"
/db_xref="GeneID:1024406"
/translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
SLETDFSLREVQALADVTLDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG
LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
DVINQTVNRVLDQFAITLPEDLFARWQGA"
misc_feature complement(2436177..2436737)
/gene="ubiX"
/locus_tag="SF2387"
/note="UbiX family flavin prenyltransferase; Region:
PRK06029"
/db_xref="CDD:235677"
gene complement(2436832..2438349)
/gene="purF"
/locus_tag="SF2388"
/db_xref="GeneID:1025528"
CDS complement(2436832..2438349)
/gene="purF"
/locus_tag="SF2388"
/note="Code: F; COG: COG0034"
/codon_start=1
/transl_table=11
/product="amidophosphoribosyltransferase"
/protein_id="NP_708194.1"
/db_xref="GeneID:1025528"
/translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE
NPDIQQFECSVFNGVYVTKDVDQGYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
misc_feature complement(2436916..2438349)
/gene="purF"
/locus_tag="SF2388"
/note="Glutamine phosphoribosylpyrophosphate
amidotransferase [Nucleotide transport and metabolism];
Region: PurF; COG0034"
/db_xref="CDD:439804"
gene complement(2438386..2438874)
/gene="cvpA"
/locus_tag="SF2389"
/db_xref="GeneID:1027225"
CDS complement(2438386..2438874)
/gene="cvpA"
/locus_tag="SF2389"
/note="Code: R; COG: COG1286"
/codon_start=1
/transl_table=11
/product="colicin V production protein"
/protein_id="NP_708195.1"
/db_xref="GeneID:1027225"
/translation="MVWIDYAIIAVIAFSSLVSLIHGFVREALSLVTWGCAFFVASHY
YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
RA"
misc_feature complement(2438392..2438874)
/gene="cvpA"
/locus_tag="SF2389"
/note="colicin V production protein; Provisional; Region:
PRK10845"
/db_xref="CDD:182773"
gene complement(2439133..2439768)
/gene="dedD"
/locus_tag="SF2390"
/db_xref="GeneID:1025545"
CDS complement(2439133..2439768)
/gene="dedD"
/locus_tag="SF2390"
/note="Code: S; COG: COG3147"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_708196.4"
/db_xref="GeneID:1025545"
/translation="MGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEP
DMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPSLSAANNSEFQPEHAPVAPPKRKP
VEPLKPKVEVPRARKPQQKPVVEEKAAPTGKAYVVHLGALKNADKVNEIVGKLRGAGY
RVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN"
misc_feature complement(2439136..2439765)
/gene="dedD"
/locus_tag="SF2390"
/note="cell division protein DedD; Provisional; Region:
PRK11633"
/db_xref="CDD:236940"
gene complement(2439785..2441053)
/gene="folC"
/locus_tag="SF2391"
/db_xref="GeneID:1025555"
CDS complement(2439785..2441053)
/gene="folC"
/locus_tag="SF2391"
/note="Code: H; COG: COG0285"
/codon_start=1
/transl_table=11
/product="bifunctional folylpolyglutamate synthase/
dihydrofolate synthase"
/protein_id="NP_708197.1"
/db_xref="GeneID:1025555"
/translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
ADVAVVTSIALDHTDWLGPDRESIGLEKAGIFRSEKPAIVGEPEMPSTIADVAQEKGA
LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA
KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
misc_feature complement(2439806..2441053)
/gene="folC"
/locus_tag="SF2391"
/note="bifunctional folylpolyglutamate synthase/
dihydrofolate synthase; Provisional; Region: PRK10846"
/db_xref="CDD:182774"
gene complement(2441123..2442037)
/gene="accD"
/locus_tag="SF2392"
/db_xref="GeneID:1025558"
CDS complement(2441123..2442037)
/gene="accD"
/locus_tag="SF2392"
/note="Code: I; COG: COG0777"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase carboxyltransferase
subunit beta"
/protein_id="NP_708198.2"
/db_xref="GeneID:1025558"
/translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
VCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDELKFRDSKKYKDRLASAQKET
GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQAQEDNCPLICFS
ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
AEPKALIGFAGPRVIEQTVREKLPPRFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
LMNLPAPNPEAPREGVVVPPVPDQEPEA"
misc_feature complement(2441201..2442037)
/gene="accD"
/locus_tag="SF2392"
/note="Acetyl-CoA carboxylase beta subunit [Lipid
transport and metabolism]; Region: AccD; COG0777"
/db_xref="CDD:440540"
gene complement(2442193..2442852)
/gene="dedA"
/locus_tag="SF2393"
/db_xref="GeneID:1025548"
CDS complement(2442193..2442852)
/gene="dedA"
/locus_tag="SF2393"
/note="Code: S; COG: COG0586"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708199.1"
/db_xref="GeneID:1025548"
/translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
VMPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFS
NPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLLFTYAGYFFGTIPMVQDNLKLLIVGIIVVSILPGVIEIIRHKRAAARAA
K"
misc_feature complement(2442196..2442852)
/gene="dedA"
/locus_tag="SF2393"
/note="DedA family protein; Region: PRK10847"
/db_xref="CDD:182775"
gene complement(2442935..2443747)
/gene="truA"
/locus_tag="SF2394"
/db_xref="GeneID:1025534"
CDS complement(2442935..2443747)
/gene="truA"
/locus_tag="SF2394"
/note="Code: J; COG: COG0101"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase A"
/protein_id="NP_708200.1"
/db_xref="GeneID:1025534"
/translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
QVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKA
VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
misc_feature complement(2442974..2443720)
/gene="truA"
/locus_tag="SF2394"
/note="tRNA U38,U39,U40 pseudouridine synthase TruA
[Translation, ribosomal structure and biogenesis]; Region:
TruA; COG0101"
/db_xref="CDD:439871"
gene complement(2443747..2444760)
/gene="usg"
/locus_tag="SF2395"
/db_xref="GeneID:1025533"
CDS complement(2443747..2444760)
/gene="usg"
/locus_tag="SF2395"
/note="Code: E; COG: COG0136"
/codon_start=1
/transl_table=11
/product="semialdehyde dehydrogenase"
/protein_id="NP_708201.1"
/db_xref="GeneID:1025533"
/translation="MSEGWNIAVLGATGAMGEALLETLAERQFPVGEIYALARNESAG
EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
YLY"
misc_feature complement(2443750..2444760)
/gene="usg"
/locus_tag="SF2395"
/note="putative semialdehyde dehydrogenase; Provisional;
Region: PRK08040"
/db_xref="CDD:181205"
gene complement(2444826..2445962)
/gene="pdxB"
/locus_tag="SF2396"
/db_xref="GeneID:1026764"
CDS complement(2444826..2445962)
/gene="pdxB"
/locus_tag="SF2396"
/note="Code: E; COG: COG0111"
/codon_start=1
/transl_table=11
/product="erythronate-4-phosphate dehydrogenase"
/protein_id="NP_708202.1"
/db_xref="GeneID:1026764"
/translation="MKILVDENMPYARDLFSRLGEVIAVPGRPIPVAQLADADALMVR
SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS
LLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS
LDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALL
TCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSK
FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG
EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
misc_feature complement(2444829..2445962)
/gene="pdxB"
/locus_tag="SF2396"
/note="erythronate-4-phosphate dehydrogenase PdxB;
Provisional; Region: PRK15438"
/db_xref="CDD:185335"
gene 2446061..2447056
/gene="flk"
/locus_tag="SF2397"
/db_xref="GeneID:1027281"
CDS 2446061..2447056
/gene="flk"
/locus_tag="SF2397"
/codon_start=1
/transl_table=11
/product="flagella biosynthesis regulator"
/protein_id="NP_708203.1"
/db_xref="GeneID:1027281"
/translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
LGEYLRLGNHRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR"
misc_feature 2446112..2447050
/gene="flk"
/locus_tag="SF2397"
/note="flagella biosynthesis regulator Flk; Region: flk;
PRK10715"
/db_xref="CDD:182670"
gene complement(2447053..2448231)
/locus_tag="SF2398"
/db_xref="GeneID:1025531"
CDS complement(2447053..2448231)
/locus_tag="SF2398"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708204.2"
/db_xref="GeneID:1025531"
/translation="MTAVSQTETRSSASFSLFRISFAVFLTYMTVGLPLPVIPLFVHH
DLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA
ILPVSAPFKFALLVIGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGA
LAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGLI
WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRF
GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ
VRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
"
misc_feature complement(2447056..2448231)
/locus_tag="SF2398"
/note="putative transporter; Provisional; Region:
PRK12382"
/db_xref="CDD:183487"
gene complement(2448486..2449727)
/gene="fabB"
/locus_tag="SF2399"
/db_xref="GeneID:1025522"
CDS complement(2448486..2449727)
/gene="fabB"
/locus_tag="SF2399"
/note="Code: IQ; COG: COG0304"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP synthase"
/protein_id="NP_708205.1"
/db_xref="GeneID:1025522"
/translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
RSHVWGNIKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI
AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAYIYAEIVGYGATSDGADMVAPSGEG
AVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
GGTNATLVMRKLKRLIRSRPE"
misc_feature complement(2448513..2449727)
/gene="fabB"
/locus_tag="SF2399"
/note="beta-ketoacyl-ACP synthase I; Region: PRK07967"
/db_xref="CDD:181184"
misc_feature complement(order(2448543..2448545,2448549..2448551,
2448891..2448893,2448927..2448941,2449116..2449121,
2449128..2449130,2449191..2449193,2449200..2449205,
2449212..2449214,2449248..2449256,2449260..2449262,
2449266..2449268,2449284..2449286,2449296..2449298,
2449308..2449310,2449326..2449328,2449365..2449370,
2449374..2449376,2449386..2449391,2449410..2449412))
/gene="fabB"
/locus_tag="SF2399"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238430"
misc_feature complement(order(2448729..2448731,2448834..2448836,
2449239..2449241))
/gene="fabB"
/locus_tag="SF2399"
/note="active site"
/db_xref="CDD:238430"
gene 2449826..2451892
/locus_tag="SF2400"
/db_xref="GeneID:1025552"
CDS 2449826..2451892
/locus_tag="SF2400"
/note="Code: E; COG: COG0665"
/codon_start=1
/transl_table=11
/product="peptidase"
/protein_id="NP_708206.3"
/db_xref="GeneID:1025552"
/translation="MRSLTHIAKIEPPPVRRVTYVKHYSIQPANLEFNAEGTPVSRDF
DDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVIAESGFGTGLNFLTLWKAFDQ
FREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHR
LLLDESRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMA
RLARPGGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSTPW
FNRTGSSKREVAIIGGGIASALLSLALLRRGWQVALYCADEAPALGASGNRQGALYPL
LSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDL
PAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQY
QLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPT
TPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCF
PQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAP
VFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKG
KAVKAG"
misc_feature 2449889..2451883
/locus_tag="SF2400"
/note="bifunctional tRNA
(5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
MnmD/FAD-dependent
5-carboxymethylaminomethyl-2-thiouridine(34)
oxidoreductase MnmC; Region: mnmC; PRK01747"
/db_xref="CDD:234978"
gene complement(2452013..2452291)
/locus_tag="SF2401"
/db_xref="GeneID:1025557"
CDS complement(2452013..2452291)
/locus_tag="SF2401"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708207.1"
/db_xref="GeneID:1025557"
/translation="MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELES
GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQL"
misc_feature complement(2452031..2452285)
/locus_tag="SF2401"
/note="YfcL protein; Region: YfcL; pfam08891"
/db_xref="CDD:430291"
gene complement(2452325..2452873)
/locus_tag="SF2402"
/db_xref="GeneID:1027254"
CDS complement(2452325..2452873)
/locus_tag="SF2402"
/note="Code: S; COG: COG3101"
/codon_start=1
/transl_table=11
/product="transporting ATPase"
/protein_id="NP_708208.1"
/db_xref="GeneID:1027254"
/translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPY
NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
AFDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA
LQNYYHTPELTAEQFPWPEALN"
misc_feature complement(2452331..2452864)
/locus_tag="SF2402"
/note="Elongation factor P hydroxylase EpmC (EF-P
beta-lysylation pathway) [Translation, ribosomal structure
and biogenesis]; Region: EpmC; COG3101"
/db_xref="CDD:442335"
gene complement(2452873..2453682)
/gene="yfcA"
/locus_tag="SF2403"
/db_xref="GeneID:1027230"
CDS complement(2452873..2453682)
/gene="yfcA"
/locus_tag="SF2403"
/note="Code: R; COG: COG0730"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708209.1"
/db_xref="GeneID:1027230"
/translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQ
YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVMLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
misc_feature complement(2452876..2453673)
/gene="yfcA"
/locus_tag="SF2403"
/note="hypothetical protein; Provisional; Region:
PRK10621"
/db_xref="CDD:182593"
gene complement(2453682..2454506)
/gene="mepA"
/locus_tag="SF2404"
/db_xref="GeneID:1025542"
CDS complement(2453682..2454506)
/gene="mepA"
/locus_tag="SF2404"
/codon_start=1
/transl_table=11
/product="penicillin-insensitive murein endopeptidase"
/protein_id="NP_708210.1"
/db_xref="GeneID:1025542"
/translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA
GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI
FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA
DSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
misc_feature complement(2453691..2454446)
/gene="mepA"
/locus_tag="SF2404"
/note="penicillin-insensitive murein endopeptidase;
Reviewed; Region: mepA; PRK09429"
/db_xref="CDD:236511"
gene complement(2454510..2455595)
/gene="aroC"
/locus_tag="SF2405"
/db_xref="GeneID:1027234"
CDS complement(2454510..2455595)
/gene="aroC"
/locus_tag="SF2405"
/note="Code: E; COG: COG0082"
/codon_start=1
/transl_table=11
/product="chorismate synthase"
/protein_id="NP_708211.2"
/db_xref="GeneID:1027234"
/translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHD
LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
FGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
MLAIVLMDHLLRQRAQNADVKTDIPRW"
misc_feature complement(2454513..2455574)
/gene="aroC"
/locus_tag="SF2405"
/note="chorismate synthase; Validated; Region: PRK05382"
/db_xref="CDD:235438"
misc_feature complement(order(2454591..2454593,2454705..2454707,
2454714..2454725,2454729..2454731,2454750..2454758,
2454762..2454770,2454777..2454779,2454825..2454830,
2454840..2454845,2454849..2454854,2454861..2454875,
2454882..2454884,2454888..2454893,2454897..2454905,
2454912..2454917,2454921..2454923,2454933..2454941,
2454945..2454947,2454978..2454995,2455008..2455010,
2455194..2455196,2455218..2455223,2455251..2455265,
2455344..2455346,2455350..2455352,2455356..2455358,
2455362..2455367,2455386..2455391,2455395..2455400,
2455497..2455502,2455512..2455514,2455518..2455520,
2455524..2455526,2455545..2455565))
/gene="aroC"
/locus_tag="SF2405"
/note="Tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:143612"
misc_feature complement(order(2454612..2454614,2454624..2454626,
2454705..2454713,2454717..2454722,2454879..2454884,
2455200..2455202,2455209..2455220,2455278..2455283,
2455452..2455454,2455539..2455541))
/gene="aroC"
/locus_tag="SF2405"
/note="active site"
/db_xref="CDD:143612"
misc_feature complement(order(2454615..2454617,2454624..2454626,
2454633..2454635,2454705..2454713,2454717..2454719,
2454879..2454887,2455215..2455217,2455221..2455223,
2455275..2455283))
/gene="aroC"
/locus_tag="SF2405"
/note="FMN-binding site [chemical binding]; other site"
/db_xref="CDD:143612"
gene complement(2455630..2456562)
/gene="yfcB"
/locus_tag="SF2407"
/db_xref="GeneID:1027341"
CDS complement(2455630..2456562)
/gene="yfcB"
/locus_tag="SF2407"
/note="Code: J; COG: COG2890"
/codon_start=1
/transl_table=11
/product="N5-glutamine S-adenosyl-L-methionine-dependent
methyltransferase"
/protein_id="NP_708212.2"
/db_xref="GeneID:1027341"
/translation="MDKIFVDEAVNELQTIQDILRWSVSRFSAANIWYGHGTDNPWDE
AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPEAEVD
AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
PFTWLEFDNGGDGVFMLTKEQLIAAREHFAIYKD"
misc_feature complement(2455678..2456526)
/gene="yfcB"
/locus_tag="SF2407"
/note="protein-(glutamine-N5) methyltransferase, ribosomal
protein L3-specific; Region: L3_gln_methyl; TIGR03533"
/db_xref="CDD:274633"
gene 2456728..2457279
/locus_tag="SF2406"
/db_xref="GeneID:1027302"
CDS 2456728..2457279
/locus_tag="SF2406"
/note="Code: S; COG: COG2840"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708213.1"
/db_xref="GeneID:1027302"
/translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
EYGGDAALLVLIEVEEWLPPELP"
misc_feature 2456728..2457270
/locus_tag="SF2406"
/note="endonuclease SmrB; Region: PRK04946"
/db_xref="CDD:235321"
gene complement(2457383..2458273)
/locus_tag="SF2408"
/db_xref="GeneID:1026765"
CDS complement(2457383..2458273)
/locus_tag="SF2408"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708214.1"
/db_xref="GeneID:1026765"
/translation="MSISEMKKWTIIFASLMLLVLSVVGASKSYAGDKLMSASFDSVR
VYYAMDKVTGAVASSVFNVTVITPKEVAYGKYDSFAYKGDTLRVISWSGSGSAPTLVL
TDFDTINNSNCPGIDTKIFRCAYMTFKITVASDDYGCPWIASFYSYTDLPGFGSYTAP
TVHNTICPTIPVASYDISWSENYVSHNKALRIQSTGSTVTTTLSTYLMEGGRLCDGSN
FSDNDGRGAYCRAVSELLTFTSYGCDKSTVTVTPTRHPVTDKVLHDIVVNVNTSSGQP
IDSTCRFQYVLNELKFVVLL"
misc_feature complement(2457404..2458087)
/locus_tag="SF2408"
/note="Protein of unknown function (DUF2544); Region:
DUF2544; pfam11245"
/db_xref="CDD:288142"
gene complement(2458260..2458784)
/locus_tag="SF2409"
/db_xref="GeneID:1025543"
CDS complement(2458260..2458784)
/locus_tag="SF2409"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="fimbrial-like protein"
/protein_id="NP_708215.1"
/db_xref="GeneID:1025543"
/translation="MKKKRTLFFISSLMLLGSGTTIAGDNLHFTGNLISKSCTPVING
SQLAEVHFPAIAASDLMNLGQSERVPLVFQLKDCHSSTLFNVKVTLTGTEDSALPGFL
AFDSSSSASGAGIGIETAAGTSVPINNTTGVTLPLNQGNNSLNFNTWLQAKSGRDVTS
GDFSATVTATFEYF"
misc_feature complement(2458263..2458784)
/locus_tag="SF2409"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
gene complement(2458781..2459251)
/locus_tag="SF2410"
/db_xref="GeneID:1025544"
CDS complement(2458781..2459251)
/locus_tag="SF2410"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="minor fimbrial subunit"
/protein_id="NP_708216.1"
/db_xref="GeneID:1025544"
/translation="MKRISLILLWGFCSMALSNVSFHGYLVQPPNCTISNAQTIEITF
QDVLIDDINGSNYEQTVPYSITCDTAVRDPLMEMTLSWSGTPSDFDNAAVSSNITGLG
IQLKQAGQSFTINTPLVVNETDLPVLTAVPVKKSGVILPEADFEAWATLQVDYQ"
misc_feature complement(2458784..2459251)
/locus_tag="SF2410"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
gene complement(2459248..2459796)
/locus_tag="SF2411"
/db_xref="GeneID:1027275"
CDS complement(2459248..2459796)
/locus_tag="SF2411"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="minor fimbrial subunit"
/protein_id="NP_708217.1"
/db_xref="GeneID:1027275"
/translation="MKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAVAASKSV
SMNLRVLVDAPPPCTVNGAAVEFGNVFINKINRVDYKRPIDYSLVCNNLAMDDLRLQM
QATTVVINGETVISTGIPGFGIRVQKSSDHTILDLTSGSWLPFNFSSGVPVLEAVPVK
QSGTTLAAAEFNASATIVVDYQ"
misc_feature complement(2459251..2459733)
/locus_tag="SF2411"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
gene complement(2459771..2460523)
/gene="yfcS"
/locus_tag="SF2412"
/pseudo
/db_xref="GeneID:1024404"
misc_feature complement(2459771..2460523)
/gene="yfcS"
/locus_tag="SF2412"
/note="Similar to Escherichia coli K12 chaperone gi:
1788677 (251 aa). BLAST with identity of 88% in 250 aa.
This CDS ontains frameshift. The sequence has been checked
and is believed to be correct."
/pseudo
gene complement(2460543..2463183)
/gene="yfcU"
/locus_tag="SF2414"
/pseudo
/db_xref="GeneID:1026793"
misc_feature complement(2461452..2463183)
/gene="yfcU"
/locus_tag="SF2414"
/note="Similar to Escherichia coli K12 outer membrane
protein gi: 1788679 (579 aa). BLAST with identity of 97%
in 577 aa. This CDS contains an in-frame stop codon. The
sequence has been checked and is believed to be correct."
/pseudo
gene complement(2463265..2463828)
/locus_tag="SF2415"
/db_xref="GeneID:1025569"
CDS complement(2463265..2463828)
/locus_tag="SF2415"
/note="Code: N; COG: COG3539"
/codon_start=1
/transl_table=11
/product="fimbrial-like protein"
/protein_id="NP_708219.1"
/db_xref="GeneID:1025569"
/translation="MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCS
IVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDTQETMTTTFTGTVSSAN
SGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNF
NAWLVGAADAPDLGNFEANTTFQITYL"
misc_feature complement(2463268..2463828)
/locus_tag="SF2415"
/note="Fimbrial protein; Region: Fimbrial; cl01416"
/db_xref="CDD:445401"
mobile_element complement(2464082..2464849)
/mobile_element_type="insertion sequence:IS1"
gene complement(2464097..2464492)
/gene="insB"
/locus_tag="SF2416"
/db_xref="GeneID:1025551"
CDS complement(2464097..2464492)
/gene="insB"
/locus_tag="SF2416"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708220.1"
/db_xref="GeneID:1025551"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(2464100..2464489)
/gene="insB"
/locus_tag="SF2416"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2464519..2464794)
/gene="insA"
/locus_tag="SF2417"
/db_xref="GeneID:1025572"
CDS complement(2464519..2464794)
/gene="insA"
/locus_tag="SF2417"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708221.1"
/db_xref="GeneID:1025572"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<2464522..2464773)
/gene="insA"
/locus_tag="SF2417"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(2465289..2465774)
/locus_tag="SF2418"
/db_xref="GeneID:1025546"
CDS complement(2465289..2465774)
/locus_tag="SF2418"
/note="Code: T; COG: COG2062"
/codon_start=1
/transl_table=11
/product="phosphohistidine phosphatase"
/protein_id="NP_708222.1"
/db_xref="GeneID:1025546"
/translation="MQVFIMRHGDAALDSASDSVRPLTTNGCDESRLMANWLKGQKVE
IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
I"
misc_feature complement(2465319..2465774)
/locus_tag="SF2418"
/note="phosphohistidine phosphatase SixA; Region: sixA;
TIGR00249"
/db_xref="CDD:129351"
misc_feature complement(order(2465448..2465453,2465610..2465612,
2465751..2465756))
/locus_tag="SF2418"
/note="catalytic core [active]"
/db_xref="CDD:132718"
gene complement(2465977..2468121)
/gene="fadJ"
/locus_tag="SF2419"
/db_xref="GeneID:1027221"
CDS complement(2465977..2468121)
/gene="fadJ"
/locus_tag="SF2419"
/codon_start=1
/transl_table=11
/product="multifunctional fatty acid oxidation complex
subunit alpha"
/protein_id="NP_708223.1"
/db_xref="GeneID:1027221"
/translation="MEMASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIK
QLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI
PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
VSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKDRPSSRPLPVRERI
LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSP
VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
MLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVAERCVM
LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
misc_feature complement(2465998..2468121)
/gene="fadJ"
/locus_tag="SF2419"
/note="fatty acid oxidation complex subunit alpha FadJ;
Region: fadJ; PRK11154"
/db_xref="CDD:236864"
gene complement(2468121..2469431)
/gene="fadI"
/locus_tag="SF2420"
/db_xref="GeneID:1025570"
CDS complement(2468121..2469431)
/gene="fadI"
/locus_tag="SF2420"
/note="Code: I; COG: COG0183"
/codon_start=1
/transl_table=11
/product="3-ketoacyl-CoA thiolase"
/protein_id="NP_708224.1"
/db_xref="GeneID:1025570"
/translation="MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPTVDLGKMV
VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLAYVLVDVNKARTMSQRLKLF
SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
DGATAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTM
SELTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGH
PFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
misc_feature complement(2468124..2469407)
/gene="fadI"
/locus_tag="SF2420"
/note="3-ketoacyl-CoA thiolase; Reviewed; Region: fadI;
PRK08963"
/db_xref="CDD:181597"
gene complement(2469611..2469919)
/locus_tag="SF2420a"
/db_xref="GeneID:16608344"
CDS complement(2469611..2469919)
/locus_tag="SF2420a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439266.1"
/db_xref="GeneID:16608344"
/translation="MHIQRKSTMSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFAN
RAEAEQTLAALTEKSRSVESEPCKISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR
"
misc_feature complement(2469614..2469901)
/locus_tag="SF2420a"
/note="Uncharacterized conserved protein YfcZ,
UPF0381/DUF406 family [Function unknown]; Region: YfcZ;
COG3691"
/db_xref="CDD:442906"
gene 2470267..2471607
/gene="fadL"
/locus_tag="SF2421"
/db_xref="GeneID:1027343"
CDS 2470267..2471607
/gene="fadL"
/locus_tag="SF2421"
/note="Code: I; COG: COG2067"
/codon_start=1
/transl_table=11
/product="long-chain fatty acid outer membrane
transporter"
/protein_id="NP_708225.2"
/db_xref="GeneID:1027343"
/translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
LNNAWSFGLGFNAIYARAKIERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDS
NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG
LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST
SGDTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF
WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
misc_feature 2470267..2471604
/gene="fadL"
/locus_tag="SF2421"
/note="long-chain fatty acid transporter FadL; Region:
PRK10716"
/db_xref="CDD:236741"
mobile_element 2472012..2473340
/mobile_element_type="insertion sequence:iso-IS10R"
gene 2472119..2473327
/locus_tag="SF2422"
/db_xref="GeneID:1025554"
CDS 2472119..2473327
/locus_tag="SF2422"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_708226.1"
/db_xref="GeneID:1025554"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature 2472233..2473288
/locus_tag="SF2422"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene 2473302..2474369
/locus_tag="SF2423"
/db_xref="GeneID:1026565"
CDS 2473302..2474369
/locus_tag="SF2423"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708227.1"
/db_xref="GeneID:1026565"
/translation="MVTFWGNYEGISQSAAYPESINENNNDEINGLVQEFKNLFNGKE
GISTCIKHLLELIKNAIRVNDDPYRSNINNSSVTYIDIGSNDTDHITIGIDNQEPIEL
PANYKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTV
TEFDESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRI
NGDSLTQYCSENARSASAWFESSKAIMAESFATGSDHQVVNELNGERLREPNEVFKRL
GRAIRYNFQVDDAKFRRDNVKEIISTLFANKVDVDHPENKYKDFKNLEDKVEKRLQNR
QTKYQNEINQLSALGVNFDDI"
gene complement(2474551..2475306)
/gene="vacJ"
/locus_tag="SF2424"
/db_xref="GeneID:1024405"
CDS complement(2474551..2475306)
/gene="vacJ"
/locus_tag="SF2424"
/note="Code: M; COG: COG2853"
/codon_start=1
/transl_table=11
/product="ABC transporter outer membrane lipoprotein"
/protein_id="NP_708228.1"
/db_xref="GeneID:1024405"
/translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR
FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
DGGDMADALYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
misc_feature complement(2474554..2475306)
/gene="vacJ"
/locus_tag="SF2424"
/note="phospholipid-binding lipoprotein MlaA; Region:
PRK15091"
/db_xref="CDD:185047"
gene 2475600..2476532
/locus_tag="SF2425"
/pseudogene="unknown"
/db_xref="GeneID:1025549"
gene 2476606..2476680
/locus_tag="SF4487"
/db_xref="GeneID:3161769"
tRNA 2476606..2476680
/locus_tag="SF4487"
/product="tRNA-Arg"
/codon_recognized="AGG"
/db_xref="GeneID:3161769"
gene 2476842..2477336
/locus_tag="SF2426"
/db_xref="GeneID:1025566"
CDS 2476842..2477336
/locus_tag="SF2426"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="NP_708230.1"
/db_xref="GeneID:1025566"
/translation="MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKID
GKEKILTVGKYPLMTLQEARDKAWTARKDISAGIDPVKAKKASSNNNSFSAIYKEWYE
HKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAIEVVNKN
WPPS"
misc_feature 2476842..>2477318
/locus_tag="SF2426"
/note="Integrase/recombinase, includes phage integrase
[Replication, recombination and repair, Mobilome:
prophages, transposons]; Region: FimB; COG0582"
/db_xref="CDD:440347"
mobile_element complement(2477303..2478551)
/mobile_element_type="insertion sequence:IS911"
gene complement(2477311..2478150)
/locus_tag="SF2427"
/db_xref="GeneID:1025568"
CDS complement(2477311..2478150)
/locus_tag="SF2427"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 integrase core
domain-containing protein"
/protein_id="NP_708231.1"
/db_xref="GeneID:1025568"
/translation="MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISH
GSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLE
RQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRS
LKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVA
SFC"
misc_feature complement(2477320..2478129)
/locus_tag="SF2427"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:222853"
gene complement(2478177..2479065)
/locus_tag="SF2428"
/pseudogene="unknown"
/db_xref="GeneID:1025564"
mobile_element complement(2478549..2479149)
/note="partial"
/mobile_element_type="insertion sequence:IS4"
gene 2479381..2480814
/locus_tag="SF2430"
/db_xref="GeneID:1025260"
CDS 2479381..2480814
/locus_tag="SF2430"
/note="Code: G; COG: COG1621"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708234.2"
/db_xref="GeneID:1025260"
/translation="MTQSRLHAAQNALAKLHEHRGNTFYPHFHLAPPAGWMNDPNGLI
WFNDRYHAFYQHHPMSEHWGPMHWGHATSDDMIHWQHEPIALALGDDNDKDGCFSGSA
VDDNGVLSLIYTGHVWLDGAGNDDAIREVQCLATSRDGIHFEKQGVILTPPEGIMHFR
DPKVWREADTWWMVVGAKDPGNTGQILLYRGSSLREWAFDRVLAHADAGESYMWECPD
FFSLGDQHYLMFSPQGMNAEGYSYRNRFQSGVIPGMWSPGRLFAQSGHFTELDNGHDF
YAPQSFLAKDGRRIVIGWMDMWESPMPSKREGWAGCMTLARELSESNGKLLQRPVHEA
ESLRQQHQSVSPRRISNKYVLQENAQAVEIQLQWALKNSDAEHYGLQLGTGMRLYIDN
QSERLILWRYYPHENLDGYRSIPLPQRDTLALRIFIDTSSVEVFINDGEAVMSSRIYP
QPEERELSLYASHGVAVLQHGALWLLG"
misc_feature 2479438..2480811
/locus_tag="SF2430"
/note="Sucrose-6-phosphate hydrolase SacC, GH32 family
[Carbohydrate transport and metabolism]; Region: SacC;
COG1621"
/db_xref="CDD:441228"
gene complement(2480822..2481880)
/locus_tag="SF2431"
/db_xref="GeneID:1027331"
CDS complement(2480822..2481880)
/locus_tag="SF2431"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="sucrose specific repressor"
/protein_id="NP_708235.2"
/db_xref="GeneID:1027331"
/translation="MDLASDVCFCYSARFTANGLGMASLKDVARLAGVSMMTVSRVMH
NAESVRPATRDRVLQAIQTLNYVPDLSARKMRAQGRKPSTLAVLAQDTATTPFSVDIL
LAIEQTASEFGWNSFLINIFSEDDAARAARQLLAHRPDGIIYTTMGLRHITLPESLYG
ENIVLANCVADDPALPSYIPDDYTAQYESTQHLLAAGYRQPLCFWLPESALATGYRRQ
GFEQAWRDAGRDLAEVKQFHMATGDDHYTDLASLLNAHFKSGKPDFDVLICGNDRAAF
VAYQVLLAKGVRIPQDVAVMGFDNLVGVGHLFLPPLTTIQLPHDIIGREAALHIIEGR
EGGRVTRIPCPLLIRCST"
misc_feature complement(2481605..2481814)
/locus_tag="SF2431"
/note="helix_turn _helix lactose operon repressor; Region:
HTH_LACI; smart00354"
/db_xref="CDD:197675"
misc_feature complement(order(2481653..2481658,2481662..2481667,
2481674..2481676,2481683..2481685,2481722..2481724,
2481731..2481736,2481749..2481751,2481758..2481763,
2481767..2481781,2481803..2481805))
/locus_tag="SF2431"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(2481656..2481685)
/locus_tag="SF2431"
/note="domain linker motif [active]"
/db_xref="CDD:143331"
misc_feature complement(2480831..2481640)
/locus_tag="SF2431"
/note="Periplasmic binding proteins and sugar binding
domain of LacI family; Region: Peripla_BP_1; pfam00532"
/db_xref="CDD:395423"
gene 2482028..2482246
/locus_tag="SF2432"
/db_xref="GeneID:1025906"
CDS 2482028..2482246
/locus_tag="SF2432"
/note="Code: GE; COG: COG2610"
/codon_start=1
/transl_table=11
/product="gluconate-like high-affinity transporter
permease"
/protein_id="NP_708236.1"
/db_xref="GeneID:1025906"
/translation="MLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLN
ETFKYYTTATFIASVVALAGTFLLSFII"
misc_feature <2482028..2482243
/locus_tag="SF2432"
/note="Anion permease ArsB/NhaD. These permeases have been
shown to translocate sodium, arsenate, antimonite, sulfate
and organic anions across biological membranes in all
three kingdoms of life. A typical anion permease contains
8-13 transmembrane helices...; Region: ArsB_NhaD_permease;
cl21473"
/db_xref="CDD:473875"
gene 2482264..2483592
/gene="dsdA"
/locus_tag="SF2433"
/db_xref="GeneID:1025561"
CDS 2482264..2483592
/gene="dsdA"
/locus_tag="SF2433"
/note="Code: E; COG: COG3048"
/codon_start=1
/transl_table=11
/product="D-serine dehydratase"
/protein_id="NP_708237.1"
/db_xref="GeneID:1025561"
/translation="MENAKMNSLIAQYPLVKDLVALKETTWFNPSTTSLAEGLPYVGL
TEQDVQDAHARLSRFAPYLAKAFAETAATGGIIESELVAIPAMQKRLEKEYQQPISGQ
LLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQ
YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGV
AVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYL
PCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNL
TAADGLAVGRASCFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMA
GPQRVCASVSYQQMHGFSAEQLRNATHLVWATGGGMVPEEEMNQYLAKGR"
misc_feature 2482264..2483589
/gene="dsdA"
/locus_tag="SF2433"
/note="D-serine dehydratase [Amino acid transport and
metabolism]; Region: DsdA; COG3048"
/db_xref="CDD:442282"
gene complement(2483700..2485238)
/gene="emrY"
/locus_tag="SF2434"
/db_xref="GeneID:1025559"
CDS complement(2483700..2485238)
/gene="emrY"
/locus_tag="SF2434"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein Y"
/protein_id="NP_708238.1"
/db_xref="GeneID:1025559"
/translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPRLTLLVLGVG
GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
GIVSITCAYLFYSGAIVLMPQLLQKTMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
IDMRVLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS
SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA
KGVG"
misc_feature complement(2483715..2485211)
/gene="emrY"
/locus_tag="SF2434"
/note="multidrug efflux MFS transporter permease subunit
EmrB; Region: EmrB; NF000391"
/db_xref="CDD:411083"
gene complement(2485238..2486401)
/gene="emrK"
/locus_tag="SF2435"
/db_xref="GeneID:1025560"
CDS complement(2485238..2486401)
/gene="emrK"
/locus_tag="SF2435"
/note="Code: Q; COG: COG1566"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein K"
/protein_id="NP_708239.1"
/db_xref="GeneID:1025560"
/translation="MEQINSNKKQSNRKKYFSLLVIVLFIAFSGAYAYWSMELEDMIS
TDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA
NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL
ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLVLKRTDIRSPVTGY
IAQRSVQVGETVSSGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV
VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM
TATIDTKDEDIAEMPDLASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
misc_feature complement(2485388..2486362)
/gene="emrK"
/locus_tag="SF2435"
/note="efflux pump membrane protein (multidrug resistance
protein A); Region: 8a0101; TIGR00998"
/db_xref="CDD:273385"
gene 2486817..2487431
/gene="evgA"
/locus_tag="SF2436"
/db_xref="GeneID:1025897"
CDS 2486817..2487431
/gene="evgA"
/locus_tag="SF2436"
/note="Code: TK; COG: COG2197"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator EvgA"
/protein_id="NP_708240.1"
/db_xref="GeneID:1025897"
/translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETL
KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK
KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD
NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG"
misc_feature 2486817..2487428
/gene="evgA"
/locus_tag="SF2436"
/note="acid-sensing system DNA-binding response regulator
EvgA; Region: PRK09958"
/db_xref="CDD:182168"
gene 2487436..2491029
/gene="evgS"
/locus_tag="SF2437"
/db_xref="GeneID:1025562"
CDS 2487436..2491029
/gene="evgS"
/locus_tag="SF2437"
/codon_start=1
/transl_table=11
/product="hybrid sensory histidine kinase in two-component
regulatory system with EvgA"
/protein_id="NP_708241.1"
/db_xref="GeneID:1025562"
/translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQQVRGINADYLNLLKRALNIKLTLRE
YADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLT
SPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSS
MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWL
DTGNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNI
ITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVF
VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKIKEGELD
ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP
SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV
IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENS
DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYI
CGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGS
GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHS
FGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLG
HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM
QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRL
LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS
LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI
EALKNNTANDLQLMQEILMTFQHETHKDLPAAFHALEAGDNRTFHQCIHRIHGAANIL
NLQKLINISHQLEITPASDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND"
misc_feature 2487436..2491026
/gene="evgS"
/locus_tag="SF2437"
/note="acid-sensing system histidine kinase EvgS; Region:
PRK09959"
/db_xref="CDD:182169"
gene complement(2491085..2492230)
/gene="yfdE"
/locus_tag="SF2438"
/db_xref="GeneID:1026767"
CDS complement(2491085..2492230)
/gene="yfdE"
/locus_tag="SF2438"
/note="Code: C; COG: COG1804"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708242.4"
/db_xref="GeneID:1026767"
/translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLYNMGARVIKVEPP
GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFR
LGTMEKLGFSWERLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
YIATGKSPQRLGNRHPYMAPFDVFDTQDKPITICCGNDKLFSALCQALELTELVNDPR
FSSNILRVQNQAILKQYIERTLKTQAAEVWLAKIHEVGVPVAPLLSVAEAINLPQTQA
RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS"
misc_feature complement(2491088..2492230)
/gene="yfdE"
/locus_tag="SF2438"
/note="putative CoA-transferase; Provisional; Region:
PRK11430"
/db_xref="CDD:183132"
gene complement(2492304..2493248)
/gene="yfdV"
/locus_tag="SF2439"
/db_xref="GeneID:1027222"
CDS complement(2492304..2493248)
/gene="yfdV"
/locus_tag="SF2439"
/note="Code: R; COG: COG0679"
/codon_start=1
/transl_table=11
/product="transporter YfdV"
/protein_id="NP_708243.1"
/db_xref="GeneID:1027222"
/translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
LAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
misc_feature complement(2492307..2493248)
/gene="yfdV"
/locus_tag="SF2439"
/note="transporter YfdV; Region: PRK09903"
/db_xref="CDD:104216"
gene complement(2493318..2495012)
/locus_tag="SF2440"
/db_xref="GeneID:1025565"
CDS complement(2493318..2495012)
/locus_tag="SF2440"
/note="Code: EH; COG: COG0028"
/codon_start=1
/transl_table=11
/product="oxalyl-CoA decarboxylase"
/protein_id="NP_708244.1"
/db_xref="GeneID:1025565"
/translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPIIMI
SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML
VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELK
QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLV
NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
misc_feature complement(2493336..2494997)
/locus_tag="SF2440"
/note="oxalyl-CoA decarboxylase; Region: oxalate_oxc;
TIGR03254"
/db_xref="CDD:132298"
gene complement(2495066..2496316)
/locus_tag="SF2441"
/db_xref="GeneID:1025581"
CDS complement(2495066..2496316)
/locus_tag="SF2441"
/note="Code: C; COG: COG1804"
/codon_start=1
/transl_table=11
/product="formyl-coenzyme A transferase"
/protein_id="NP_708245.1"
/db_xref="GeneID:1025581"
/translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
TAAVLQELGYSDDEIAAMKQNHAI"
misc_feature complement(2495069..2496316)
/locus_tag="SF2441"
/note="formyl-coenzyme A transferase; Provisional; Region:
PRK05398"
/db_xref="CDD:180055"
gene complement(2496829..2497452)
/locus_tag="SF2442"
/db_xref="GeneID:1025574"
CDS complement(2496829..2497452)
/locus_tag="SF2442"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708246.1"
/db_xref="GeneID:1025574"
/translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQTQKTAAAER
ISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLN
DDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQY
LMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
misc_feature complement(2496832..2497452)
/locus_tag="SF2442"
/note="hypothetical protein; Provisional; Region:
PRK10316"
/db_xref="CDD:182374"
gene 2497749..2498024
/locus_tag="SF2442a"
/db_xref="GeneID:16608345"
CDS 2497749..2498024
/locus_tag="SF2442a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439267.1"
/db_xref="GeneID:16608345"
/translation="MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAM
TTTHSTKLQPSQAILFKMREDVPPLNLTEEITPTYPTKANYLIHPVR"
gene complement(2498101..2498343)
/locus_tag="SF2443"
/db_xref="GeneID:1027223"
CDS complement(2498101..2498343)
/locus_tag="SF2443"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708247.1"
/db_xref="GeneID:1027223"
/translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
FTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR"
misc_feature complement(2498104..2498343)
/locus_tag="SF2443"
/note="Protein of unknown function (DUF2545); Region:
DUF2545; pfam10810"
/db_xref="CDD:431506"
gene 2498630..2499616
/gene="ddg"
/locus_tag="SF2444"
/db_xref="GeneID:1023448"
CDS 2498630..2499616
/gene="ddg"
/locus_tag="SF2444"
/note="Code: N; COG: COG1560"
/codon_start=1
/transl_table=11
/product="heat shock protein"
/protein_id="NP_708248.3"
/db_xref="GeneID:1023448"
/translation="MSVPLSTWNLLRYNNSYLQKVTMFPQCKFSREFLHPRYWLTWFG
LGVLWLWVQLPYPVLCFLGTRIGAMARPFLKRRESIARKNLELCFPQHSAEEREKMIA
ENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLEL
GGRVMGLCQPMMATYRPHNNQLMEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVW
FAPDQDYGRKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFI
TPEMEGYPTDENQAAAYMNKIIEKEIMRAPEQYLWIHRRFKTRPVGESSLYI"
misc_feature 2498696..2499610
/gene="ddg"
/locus_tag="SF2444"
/note="kdo(2)-lipid IV(A) palmitoleoyltransferase; Region:
PRK08025"
/db_xref="CDD:181200"
misc_feature order(2499089..2499091,2499098..2499100,2499104..2499106,
2499152..2499163,2499296..2499304)
/gene="ddg"
/locus_tag="SF2444"
/note="putative acyl-acceptor binding pocket [active]"
/db_xref="CDD:153246"
gene complement(2500107..2501345)
/locus_tag="SF2445"
/db_xref="GeneID:1027206"
CDS complement(2500107..2501345)
/locus_tag="SF2445"
/note="Code: E; COG: COG0436"
/codon_start=1
/transl_table=11
/product="aminotransferase"
/protein_id="NP_708249.2"
/db_xref="GeneID:1027206"
/translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
NPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKCYDVLVVHDLAYADIVY
DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKI
PEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENHDRIRQAIRGIKA
MFRADGLLPVSSKHIHENAE"
misc_feature complement(2500143..2501324)
/locus_tag="SF2445"
/note="aminotransferase; Validated; Region: PRK08175"
/db_xref="CDD:181268"
gene 2501722..2503208
/locus_tag="SF2446"
/pseudo
/db_xref="GeneID:1025909"
misc_feature 2501722..2503208
/locus_tag="SF2446"
/note="Similar to Escherichia coli K12 sensor protein gi:
1788723 (566 aa). BLAST with identity of 99% in 496 aa.
This CDS contains deletion. The sequence has been checked
and is believed to be correct."
/pseudo
gene 2503223..2503957
/locus_tag="SF2447"
/db_xref="GeneID:1027211"
CDS 2503223..2503957
/locus_tag="SF2447"
/note="Code: T; COG: COG3279"
/codon_start=1
/transl_table=11
/product="2-component transcriptional regulator"
/protein_id="NP_708250.2"
/db_xref="GeneID:1027211"
/translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH
NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP
YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA
HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI
LRLKDLDFEVPVSRSKVKEFRQLMHL"
misc_feature 2503223..2503945
/locus_tag="SF2447"
/note="DNA-binding response regulator, LytR/AlgR family
[Transcription, Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:442510"
gene 2503970..2504827
/locus_tag="SF2448"
/pseudo
/db_xref="GeneID:1027215"
misc_feature 2503970..2504827
/locus_tag="SF2448"
/note="Similar to Escherichia coli K12 ARAC-type
regulatory protein gi: 1788725 (286 aa). BLAST with
identity of 97% in 286 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2504830..2507325)
/locus_tag="SF2449"
/db_xref="GeneID:1025242"
CDS complement(2504830..2507325)
/locus_tag="SF2449"
/note="Code: G; COG: COG1080"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIA"
/protein_id="NP_708251.1"
/db_xref="GeneID:1025242"
/translation="MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKA
DAKSSLALIGTGTLFNDSCSLNISGSDEEQARRVLEEYILVRFIDSDSVQPTQAELTA
HPLPRSLSRLNPDLLYGNVLASGVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLA
TLAEQLNQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQ
VCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQ
FLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCG
VLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIVANIGTALEAPG
AFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKS
IPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQI
LWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT
QYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLL
LGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEED
VRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVG
FGVAIPHTKSQWIRHSSISIARLAKPVDWQSEMGEVELVIMLTLGANEGMNHVKVFSQ
LARKLVNKNFRQSLFAAQDAQSILTLLETELTF"
misc_feature complement(2507077..2507313)
/locus_tag="SF2449"
/note="Histidine-containing phosphocarrier protein
(HPr)-like proteins. HPr is a central component of the
bacterial phosphoenolpyruvate sugar phosphotransferase
system (PTS). The PTS catalyses the phosphorylation of
sugar substrates during their translocation...; Region:
PTS-HPr_like; cd00367"
/db_xref="CDD:238217"
misc_feature complement(2507302..2507313)
/locus_tag="SF2449"
/note="dimerization domain swap beta strand [polypeptide
binding]; other site"
/db_xref="CDD:238217"
misc_feature complement(order(2507164..2507169,2507176..2507187,
2507245..2507247,2507254..2507256,2507266..2507271,
2507275..2507280,2507284..2507286))
/locus_tag="SF2449"
/note="regulatory protein interface [polypeptide binding];
other site"
/db_xref="CDD:238217"
misc_feature complement(2507281..2507283)
/locus_tag="SF2449"
/note="active site"
/db_xref="CDD:238217"
misc_feature complement(2507182..2507184)
/locus_tag="SF2449"
/note="regulatory phosphorylation site [posttranslational
modification]; other site"
/db_xref="CDD:238217"
misc_feature complement(2505286..2506977)
/locus_tag="SF2449"
/note="Phosphoenolpyruvate-protein kinase (PTS system EI
component in bacteria) [Carbohydrate transport and
metabolism]; Region: PtsA; COG1080"
/db_xref="CDD:440698"
misc_feature complement(2504890..2505270)
/locus_tag="SF2449"
/note="PTS system, fructose subfamily, IIA component;
Region: fruA; TIGR00848"
/db_xref="CDD:273298"
misc_feature complement(order(2505085..2505087,2505133..2505135))
/locus_tag="SF2449"
/note="active site"
/db_xref="CDD:238129"
misc_feature complement(2505085..2505087)
/locus_tag="SF2449"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238129"
gene complement(2507350..2508387)
/locus_tag="SF2450"
/db_xref="GeneID:1027213"
CDS complement(2507350..2508387)
/locus_tag="SF2450"
/note="Code: G; COG: COG1363"
/codon_start=1
/transl_table=11
/product="exoaminopeptidase"
/protein_id="NP_708252.1"
/db_xref="GeneID:1027213"
/translation="MDLSLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFDGLGS
VLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR
EECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRV
MGKAFDDRLSCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAI
VLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQAD
MFSNGGTDGGAVHLTGTGVPTLVMGPATRHGHCAASIADCRDILQMEQLLSALIQRLT
RETVVQLTDFR"
misc_feature complement(2507356..2508387)
/locus_tag="SF2450"
/note="aminopeptidase; Region: PRK09961"
/db_xref="CDD:182170"
misc_feature complement(order(2507449..2507451,2507461..2507463,
2507470..2507475,2507521..2507523,2507557..2507559,
2507599..2507601,2507647..2507649,2507665..2507673,
2507767..2507772,2507779..2507781,2507905..2507907,
2507911..2507913,2507923..2507925,2507929..2507931,
2507959..2507964,2508004..2508012,2508016..2508018,
2508058..2508060,2508064..2508069,2508100..2508108,
2508142..2508144,2508175..2508183,2508259..2508261,
2508268..2508273,2508307..2508309,2508319..2508321,
2508334..2508342))
/locus_tag="SF2450"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:193517"
misc_feature complement(order(2507464..2507469,2507542..2507547,
2507554..2507556,2507716..2507727,2507782..2507784,
2507791..2507796,2507890..2507892,2508202..2508204))
/locus_tag="SF2450"
/note="active site"
/db_xref="CDD:193517"
gene complement(2508387..2509470)
/locus_tag="SF2451"
/pseudo
/db_xref="GeneID:1025584"
misc_feature complement(2508387..2509470)
/locus_tag="SF2451"
/note="Similar to Escherichia coli K12 peptidase gi:
1788728 (362 aa). BLAST with identity of 96% in 361 aa.
This CDS ontains frameshift. The sequence has been checked
and is believed to be correct."
/pseudo
gene complement(2509485..2510732)
/locus_tag="SF2452"
/db_xref="GeneID:1025577"
CDS complement(2509485..2510732)
/locus_tag="SF2452"
/note="Code: G; COG: COG1299"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708253.1"
/db_xref="GeneID:1025577"
/translation="MAIKKRSATVVPGASGAAAAVKNLQASKSSFWGELPQHVMSGIS
RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF
GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV
PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
FGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAII
TALMVVFLRLMMFRKGKLLIDSL"
misc_feature complement(2509530..>2510729)
/locus_tag="SF2452"
/note="Phosphotransferase system, fructose-specific IIC
component [Carbohydrate transport and metabolism]; Region:
FrwC; COG1299"
/db_xref="CDD:440910"
gene complement(2510754..2511080)
/locus_tag="SF2453"
/db_xref="GeneID:1025578"
CDS complement(2510754..2511080)
/locus_tag="SF2453"
/note="Code: G; COG: COG1445"
/codon_start=1
/transl_table=11
/product="PTS system transporter subunit IIB"
/protein_id="NP_708254.2"
/db_xref="GeneID:1025578"
/translation="MSKKLIALCACPMGLAHTFMAAQVLEEAAVEAGYEVKIETQGAD
GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM
IASEQQ"
misc_feature complement(2510775..2511071)
/locus_tag="SF2453"
/note="Phosphotransferase system fructose-specific
component IIB [Carbohydrate transport and metabolism];
Region: FrwB; COG1445"
/db_xref="CDD:441054"
gene complement(2511299..2512264)
/gene="glk"
/locus_tag="SF2454"
/db_xref="GeneID:1025571"
CDS complement(2511299..2512264)
/gene="glk"
/locus_tag="SF2454"
/note="Code: G; COG: COG0837"
/codon_start=1
/transl_table=11
/product="glucokinase"
/protein_id="NP_708255.1"
/db_xref="GeneID:1025571"
/translation="MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH
VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI
TERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASG
FRAAFEDKGRFKEYVHDIPVYLIVHDYPGLLGSGAHLRQTLGHIL"
misc_feature complement(2511317..2512261)
/gene="glk"
/locus_tag="SF2454"
/note="glucokinase; Provisional; Region: glk; PRK00292"
/db_xref="CDD:234716"
gene 2512468..2513724
/locus_tag="SF2455"
/db_xref="GeneID:1027214"
CDS 2512468..2513724
/locus_tag="SF2455"
/note="Code: P; COG: COG0038"
/codon_start=1
/transl_table=11
/product="ion channel protein"
/protein_id="NP_708256.1"
/db_xref="GeneID:1027214"
/translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQR
LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPR
LIVALILGLAGGVSLGPEHPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALF
GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM
EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGG
PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA
LGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML
PAWLLLAGKPMMMVNRPKQQPPHDNV"
misc_feature 2512468..2513709
/locus_tag="SF2455"
/note="putative ion channel protein; Provisional; Region:
PRK03655"
/db_xref="CDD:235148"
misc_feature order(2512720..2512734,2512819..2512833,2513434..2513448)
/locus_tag="SF2455"
/note="Cl- selectivity filter [active]"
/db_xref="CDD:238233"
misc_feature order(2512723..2512725,2512729..2512731,2512825..2512830,
2513434..2513442)
/locus_tag="SF2455"
/note="Cl- binding residues [ion binding]; other site"
/db_xref="CDD:238233"
misc_feature 2512825..2512827
/locus_tag="SF2455"
/note="pore gating glutamate residue [active]"
/db_xref="CDD:238233"
misc_feature order(2512957..2512959,2512984..2512986,2513038..2513040,
2513059..2513061,2513560..2513562,2513569..2513571,
2513593..2513595,2513617..2513619,2513638..2513643)
/locus_tag="SF2455"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238233"
gene 2513839..2514165
/locus_tag="SF2456"
/db_xref="GeneID:1027208"
CDS 2513839..2514165
/locus_tag="SF2456"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708257.1"
/db_xref="GeneID:1027208"
/translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW
DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGR
GHGHRH"
misc_feature 2513905..2514156
/locus_tag="SF2456"
/note="Protein of unknown function (DUF2502); Region:
DUF2502; pfam10697"
/db_xref="CDD:431443"
gene complement(2514306..2515544)
/gene="mntH"
/locus_tag="SF2457"
/db_xref="GeneID:1027216"
CDS complement(2514306..2515544)
/gene="mntH"
/locus_tag="SF2457"
/note="Code: P; COG: COG1914"
/codon_start=1
/transl_table=11
/product="manganese transport protein MntH"
/protein_id="NP_708258.1"
/db_xref="GeneID:1027216"
/translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNYATNIQA
GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL
LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSS
LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLVMMATAAAAFHFSGHTGVADLDEAY
LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP
SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV
IVVLVVALNIWLLVGTALGL"
misc_feature complement(2514309..2515544)
/gene="mntH"
/locus_tag="SF2457"
/note="divalent metal cation transporter MntH; Region:
PRK00701"
/db_xref="CDD:234815"
gene 2515880..2517082
/gene="nupC"
/locus_tag="SF2458"
/db_xref="GeneID:1025575"
CDS 2515880..2517082
/gene="nupC"
/locus_tag="SF2458"
/note="Code: F; COG: COG1972"
/codon_start=1
/transl_table=11
/product="nucleosides permease"
/protein_id="NP_708259.2"
/db_xref="GeneID:1025575"
/translation="MDRVLHFVLALAVVVILALLVSSDRKKIRIRYVIQLLVIEVLLA
WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
ASIAALVL"
misc_feature 2515889..2517079
/gene="nupC"
/locus_tag="SF2458"
/note="Nucleoside permease NupC [Nucleotide transport and
metabolism]; Region: NupC; COG1972"
/db_xref="CDD:441575"
gene complement(2517442..2519360)
/gene="yfeA"
/locus_tag="SF2459"
/pseudo
/db_xref="GeneID:1027219"
misc_feature complement(2517442..2519360)
/gene="yfeA"
/locus_tag="SF2459"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788739 (769 aa). BLAST with
identity of 99% in 639 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2519452..2519527)
/locus_tag="SF4488"
/db_xref="GeneID:3161815"
tRNA complement(2519452..2519527)
/locus_tag="SF4488"
/product="tRNA-Ala"
/codon_recognized="GCC"
/db_xref="GeneID:3161815"
gene complement(2519567..2519642)
/locus_tag="SF4489"
/db_xref="GeneID:3161819"
tRNA complement(2519567..2519642)
/locus_tag="SF4489"
/product="tRNA-Ala"
/codon_recognized="GCC"
/db_xref="GeneID:3161819"
gene 2519878..2520222
/gene="yfeC"
/locus_tag="SF2460"
/db_xref="GeneID:1027209"
CDS 2519878..2520222
/gene="yfeC"
/locus_tag="SF2460"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708260.2"
/db_xref="GeneID:1027209"
/translation="MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHV
NEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII
GLLQRLGIRDSK"
misc_feature 2519878..2520216
/gene="yfeC"
/locus_tag="SF2460"
/note="Helix-Turn-Helix DNA binding domain of
transcription regulators from the MerR superfamily;
Region: HTH_MerR-SF; cl02600"
/db_xref="CDD:470628"
gene 2520245..2520622
/gene="yfeD"
/locus_tag="SF2461"
/db_xref="GeneID:1027217"
CDS 2520245..2520622
/gene="yfeD"
/locus_tag="SF2461"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708261.1"
/db_xref="GeneID:1027217"
/translation="MTTEELAECLGVAKQTVNRWTREKGWKTEKFPGVKGGRARLILV
DTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVA
QFLSREGIIIRNFLARLDIDESA"
misc_feature 2520245..2520616
/gene="yfeD"
/locus_tag="SF2461"
/note="Putative transcription regulator (DUF1323); Region:
DUF1323; pfam07037"
/db_xref="CDD:399786"
gene complement(2520674..2522089)
/gene="gltX"
/locus_tag="SF2462"
/db_xref="GeneID:1025573"
CDS complement(2520674..2522089)
/gene="gltX"
/locus_tag="SF2462"
/note="Code: J; COG: COG0008"
/codon_start=1
/transl_table=11
/product="glutamyl-tRNA synthetase"
/protein_id="NP_708262.1"
/db_xref="GeneID:1025573"
/translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADARKKHLRPVARQPLEVVR
DKLAAITDWPAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGK
TRSIERINKALDFIAERENQQ"
misc_feature complement(2520692..2522086)
/gene="gltX"
/locus_tag="SF2462"
/note="glutamyl-tRNA synthetase, bacterial family; Region:
gltX_bact; TIGR00464"
/db_xref="CDD:273092"
gene 2522348..2522423
/locus_tag="SF4490"
/db_xref="GeneID:3161793"
tRNA 2522348..2522423
/locus_tag="SF4490"
/product="tRNA-Val"
/codon_recognized="GUA"
/db_xref="GeneID:3161793"
gene 2522467..2522542
/locus_tag="SF4491"
/db_xref="GeneID:3161845"
tRNA 2522467..2522542
/locus_tag="SF4491"
/product="tRNA-Val"
/codon_recognized="GUA"
/db_xref="GeneID:3161845"
gene 2522547..2522622
/locus_tag="SF4492"
/db_xref="GeneID:3161792"
tRNA 2522547..2522622
/locus_tag="SF4492"
/product="tRNA-Lys"
/codon_recognized="AAA"
/db_xref="GeneID:3161792"
gene 2522898..2523239
/gene="flxA"
/locus_tag="SF2463"
/db_xref="GeneID:1025595"
CDS 2522898..2523239
/gene="flxA"
/locus_tag="SF2463"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708263.1"
/db_xref="GeneID:1025595"
/translation="MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQI
KEIVDTSGSAEDKQKQAELIQQQITLLETQLAQLQKQQAEKAQEKEQRLSLNVSLLNP
VEKTTHIDIYI"
misc_feature 2522931..2523173
/gene="flxA"
/locus_tag="SF2463"
/note="FlxA-like protein; Region: FlxA; pfam14282"
/db_xref="CDD:433836"
gene complement(2523230..2524156)
/gene="yfeR"
/locus_tag="SF2464"
/db_xref="GeneID:1026769"
CDS complement(2523230..2524156)
/gene="yfeR"
/locus_tag="SF2464"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_708264.1"
/db_xref="GeneID:1026769"
/translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH
TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT
ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE
AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN
IVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNR
SLSTAAEALWDVVRDQGNALMAGREGDPLYQI"
misc_feature complement(2523965..2524144)
/gene="yfeR"
/locus_tag="SF2464"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:459683"
misc_feature complement(2523290..2523877)
/gene="yfeR"
/locus_tag="SF2464"
/note="TThe C-terminal substrate binding domain of an
uncharacterized LysR-type transcriptional regulator,
contains the type 2 periplasmic binding fold; Region:
PBP2_LTTR_like_4; cd08440"
/db_xref="CDD:176131"
misc_feature complement(order(2523452..2523457,2523461..2523466,
2523482..2523499,2523773..2523793,2523797..2523799,
2523809..2523811,2523818..2523823,2523827..2523832))
/gene="yfeR"
/locus_tag="SF2464"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176131"
gene 2524246..2525244
/gene="yfeH"
/locus_tag="SF2465"
/db_xref="GeneID:1025487"
CDS 2524246..2525244
/gene="yfeH"
/locus_tag="SF2465"
/note="Code: R; COG: COG0385"
/codon_start=1
/transl_table=11
/product="cytochrome oxidase"
/protein_id="NP_708265.1"
/db_xref="GeneID:1025487"
/translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF
LYLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGARGS
LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLSFNKADEITIVFCGSKKSLANG
IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA"
misc_feature 2524267..2525193
/gene="yfeH"
/locus_tag="SF2465"
/note="SBF-like CPA transporter family (DUF4137); Region:
SBF_like; pfam13593"
/db_xref="CDD:433336"
gene complement(2525461..2527476)
/gene="ligA"
/locus_tag="SF2466"
/db_xref="GeneID:1025587"
CDS complement(2525461..2527476)
/gene="ligA"
/locus_tag="SF2466"
/note="Code: L; COG: COG0272"
/codon_start=1
/transl_table=11
/product="NAD-dependent DNA ligase LigA"
/protein_id="NP_708266.1"
/db_xref="GeneID:1025587"
/translation="MESIEQQLTELRTTLCHHEYLYHVMDAPEIPDAEYDRLMRELRE
LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGVPVSDRVTLCESAEEVLAFYHKVEED
RPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD
VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKLAQNVVNALEKAKETTF
ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
misc_feature complement(2525467..2527476)
/gene="ligA"
/locus_tag="SF2466"
/note="NAD-dependent DNA ligase LigA; Validated; Region:
ligA; PRK07956"
/db_xref="CDD:236137"
gene complement(2527547..2528530)
/gene="zipA"
/locus_tag="SF2467"
/db_xref="GeneID:1025370"
CDS complement(2527547..2528530)
/gene="zipA"
/locus_tag="SF2467"
/note="Code: D; COG: COG3115"
/codon_start=1
/transl_table=11
/product="cell division protein ZipA"
/protein_id="NP_708267.2"
/db_xref="GeneID:1025370"
/translation="MQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMK
SKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYLPPYASAQPRQ
PVQQPPEAQVPPQHAPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQ
QAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQA
GFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGD
ELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
misc_feature complement(2527574..2528473)
/gene="zipA"
/locus_tag="SF2467"
/note="cell division protein ZipA; Region: septum_zipA;
TIGR02205"
/db_xref="CDD:274030"
gene 2528763..2529524
/gene="cysZ"
/locus_tag="SF2468"
/db_xref="GeneID:1027218"
CDS 2528763..2529524
/gene="cysZ"
/locus_tag="SF2468"
/note="Code: E; COG: COG2981"
/codon_start=1
/transl_table=11
/product="sulfate transport protein CysZ"
/protein_id="NP_708268.1"
/db_xref="GeneID:1027218"
/translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
GAFWWLFTQLDVWIPTFMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFVWYLPRAIVLLILYFIP
GIGQTVAPVLWFLFSAWMLAIQYCDYPFDTHKVPFKEMRTALRTRKITNMQFGALTSL
FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR"
misc_feature 2528769..2529521
/gene="cysZ"
/locus_tag="SF2468"
/note="putative sulfate transport protein CysZ; Validated;
Region: PRK04949"
/db_xref="CDD:179898"
gene 2529709..2530680
/gene="cysK"
/locus_tag="SF2469"
/db_xref="GeneID:1025576"
CDS 2529709..2530680
/gene="cysK"
/locus_tag="SF2469"
/note="Code: E; COG: COG0031"
/codon_start=1
/transl_table=11
/product="cysteine synthase A"
/protein_id="NP_708269.1"
/db_xref="GeneID:1025576"
/translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQVLAGE
EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
misc_feature 2529730..2530644
/gene="cysK"
/locus_tag="SF2469"
/note="cysteine synthase A; Region: cysK; TIGR01139"
/db_xref="CDD:273465"
misc_feature order(2529757..2529765,2529793..2529795,2529811..2529813,
2529817..2529819,2529943..2529945,2529952..2529954,
2530000..2530005,2530012..2530017,2530024..2530029,
2530195..2530200,2530495..2530503,2530507..2530515,
2530588..2530590,2530618..2530620,2530627..2530629)
/gene="cysK"
/locus_tag="SF2469"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:107204"
misc_feature order(2529832..2529834,2529922..2529924,2530234..2530251,
2530393..2530395,2530525..2530527,2530606..2530611)
/gene="cysK"
/locus_tag="SF2469"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:107204"
misc_feature 2529832..2529834
/gene="cysK"
/locus_tag="SF2469"
/note="catalytic residue [active]"
/db_xref="CDD:107204"
gene 2531064..2531321
/gene="ptsH"
/locus_tag="SF2470"
/db_xref="GeneID:1026874"
CDS 2531064..2531321
/gene="ptsH"
/locus_tag="SF2470"
/note="Code: G; COG: COG1925"
/codon_start=1
/transl_table=11
/product="PTS system phosphohistidinoprotein-hexose
phosphotransferase subunit Hpr"
/protein_id="NP_708270.1"
/db_xref="GeneID:1026874"
/translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
misc_feature 2531064..2531318
/gene="ptsH"
/locus_tag="SF2470"
/note="phosphocarrier protein Hpr; Region: PRK10850"
/db_xref="CDD:182777"
misc_feature 2531076..2531087
/gene="ptsH"
/locus_tag="SF2470"
/note="dimerization domain swap beta strand [polypeptide
binding]; other site"
/db_xref="CDD:238217"
misc_feature order(2531103..2531105,2531109..2531114,2531118..2531123,
2531133..2531135,2531142..2531144,2531196..2531207,
2531214..2531219)
/gene="ptsH"
/locus_tag="SF2470"
/note="regulatory protein interface [polypeptide binding];
other site"
/db_xref="CDD:238217"
misc_feature 2531106..2531108
/gene="ptsH"
/locus_tag="SF2470"
/note="active site"
/db_xref="CDD:238217"
misc_feature 2531199..2531201
/gene="ptsH"
/locus_tag="SF2470"
/note="regulatory phosphorylation site [posttranslational
modification]; other site"
/db_xref="CDD:238217"
gene 2531366..2533093
/gene="ptsI"
/locus_tag="SF2471"
/db_xref="GeneID:1026770"
CDS 2531366..2533093
/gene="ptsI"
/locus_tag="SF2471"
/note="Code: G; COG: COG1080"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate-protein phosphotransferase"
/protein_id="NP_708271.1"
/db_xref="GeneID:1026770"
/translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL
SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
KFIEEKTIC"
misc_feature 2531366..2533090
/gene="ptsI"
/locus_tag="SF2471"
/note="phosphoenolpyruvate-protein phosphotransferase
PtsI; Region: PRK11177"
/db_xref="CDD:183017"
gene 2533134..2533643
/gene="crr"
/locus_tag="SF2472"
/db_xref="GeneID:1027210"
CDS 2533134..2533643
/gene="crr"
/locus_tag="SF2472"
/note="Code: G; COG: COG2190"
/codon_start=1
/transl_table=11
/product="PTS system glucose-specific transporter subunit
IIA"
/protein_id="NP_708272.1"
/db_xref="GeneID:1027210"
/translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVG
ETPVIRIKK"
misc_feature 2533134..2533640
/gene="crr"
/locus_tag="SF2472"
/note="PTS system glucose-specific transporter subunit;
Provisional; Region: PRK09439"
/db_xref="CDD:181859"
misc_feature order(2533248..2533259,2533269..2533274,2533338..2533343,
2533347..2533352,2533368..2533376,2533392..2533400,
2533404..2533406,2533416..2533418,2533422..2533427,
2533461..2533463,2533557..2533559,2533566..2533568)
/gene="crr"
/locus_tag="SF2472"
/note="HPr interaction site [active]"
/db_xref="CDD:238128"
misc_feature order(2533248..2533250,2533254..2533259,2533263..2533265,
2533269..2533274,2533341..2533343,2533347..2533349,
2533359..2533361,2533398..2533400,2533404..2533406,
2533416..2533418,2533422..2533427,2533431..2533433,
2533557..2533559)
/gene="crr"
/locus_tag="SF2472"
/note="glycerol kinase (GK) interaction site [polypeptide
binding]; other site"
/db_xref="CDD:238128"
misc_feature order(2533353..2533355,2533359..2533361,2533404..2533406,
2533410..2533412)
/gene="crr"
/locus_tag="SF2472"
/note="active site"
/db_xref="CDD:238128"
misc_feature 2533404..2533406
/gene="crr"
/locus_tag="SF2472"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238128"
gene complement(2533685..2534536)
/gene="pdxK"
/locus_tag="SF2473"
/db_xref="GeneID:1025882"
CDS complement(2533685..2534536)
/gene="pdxK"
/locus_tag="SF2473"
/note="Code: H; COG: COG2240"
/codon_start=1
/transl_table=11
/product="pyridoxal-pyridoxamine
kinase/hydroxymethylpyrimidine kinase"
/protein_id="NP_708273.1"
/db_xref="GeneID:1025882"
/translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRAFQERDALRQLRAVTTGYMGTASQ
IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNV
ISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELI
LPPLAEA"
misc_feature complement(2533694..2534536)
/gene="pdxK"
/locus_tag="SF2473"
/note="pyridoxine/pyridoxal/pyridoxamine kinase; Region:
pdxK; PRK08176"
/db_xref="CDD:181269"
misc_feature complement(order(2534288..2534290,2534309..2534314,
2534333..2534335,2534339..2534344,2534369..2534371,
2534378..2534380,2534387..2534404,2534417..2534419,
2534426..2534428,2534438..2534440,2534450..2534452,
2534456..2534461,2534465..2534467,2534486..2534488))
/gene="pdxK"
/locus_tag="SF2473"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238578"
misc_feature complement(order(2533838..2533840,2533847..2533852,
2534243..2534245,2534249..2534251,2534348..2534350,
2534363..2534368,2534375..2534377,2534444..2534449,
2534468..2534470))
/gene="pdxK"
/locus_tag="SF2473"
/note="pyridoxal binding site [chemical binding]; other
site"
/db_xref="CDD:238578"
misc_feature complement(order(2533745..2533747,2533757..2533759,
2533832..2533834,2533838..2533846,2533865..2533870,
2533874..2533876,2533919..2533921,2533949..2533954,
2534051..2534053,2534060..2534062,2534066..2534068,
2534147..2534149,2534162..2534164))
/gene="pdxK"
/locus_tag="SF2473"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238578"
gene 2534641..2535015
/gene="yfeK"
/locus_tag="SF2474"
/db_xref="GeneID:1027204"
CDS 2534641..2535015
/gene="yfeK"
/locus_tag="SF2474"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708274.1"
/db_xref="GeneID:1027204"
/translation="MKKIICLAITLLMTLPAYAKLTVHEEARINAMLEGLAQKKDLIF
VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE
NAQPFLHALIAQTDKTVPAEGN"
misc_feature 2534644..2535006
/gene="yfeK"
/locus_tag="SF2474"
/note="hypothetical protein; Provisional; Region:
PRK10318"
/db_xref="CDD:236672"
gene 2535048..2535771
/locus_tag="SF2475"
/pseudo
/db_xref="GeneID:1025588"
misc_feature 2535048..2535771
/locus_tag="SF2475"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788760 (245 aa). BLAST with
identity of 96% in 241 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2535975..2536886)
/gene="cysM"
/locus_tag="SF2476"
/db_xref="GeneID:1025594"
CDS complement(2535975..2536886)
/gene="cysM"
/locus_tag="SF2476"
/note="Code: E; COG: COG0031"
/codon_start=1
/transl_table=11
/product="cysteine synthase B"
/protein_id="NP_708275.2"
/db_xref="GeneID:1025594"
/translation="MSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRA
ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
QTGGRITHFVSSMGTTGTITGVSCFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
GIFNAALVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
AIICDRGDRYLSTGVFGEEHFSQGAGI"
misc_feature complement(2536005..2536886)
/gene="cysM"
/locus_tag="SF2476"
/note="cysteine synthase CysM; Region: cysM; PRK11761"
/db_xref="CDD:236972"
misc_feature complement(order(2536026..2536028,2536035..2536037,
2536065..2536067,2536134..2536142,2536146..2536154,
2536404..2536409,2536569..2536574,2536581..2536586,
2536593..2536598,2536644..2536646,2536653..2536655,
2536779..2536781,2536785..2536787,2536803..2536805,
2536842..2536850))
/gene="cysM"
/locus_tag="SF2476"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:107204"
misc_feature complement(order(2536044..2536049,2536122..2536124,
2536263..2536265,2536353..2536370,2536674..2536676,
2536764..2536766))
/gene="cysM"
/locus_tag="SF2476"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:107204"
misc_feature complement(2536764..2536766)
/gene="cysM"
/locus_tag="SF2476"
/note="catalytic residue [active]"
/db_xref="CDD:107204"
gene complement(2537020..2538117)
/locus_tag="SF2476a"
/db_xref="GeneID:16608346"
CDS complement(2537020..2538117)
/locus_tag="SF2476a"
/codon_start=1
/transl_table=11
/product="sulfate ABC transporter ATP-binding protein"
/protein_id="YP_008439268.1"
/db_xref="GeneID:16608346"
/translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNITFGLTVL
PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
DAPNQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQHGE
RLFVGLQHARLYNGDERIETRDEELALAQSA"
misc_feature complement(2537062..2538117)
/locus_tag="SF2476a"
/note="sulfate/thiosulfate ABC transporter ATP-binding
protein CysA; Region: PRK10851"
/db_xref="CDD:182778"
gene complement(2538107..2538556)
/gene="cysW"
/locus_tag="SF2477"
/pseudo
/db_xref="GeneID:1025591"
misc_feature complement(2538107..2538556)
/gene="cysW"
/locus_tag="SF2477"
/note="Similar to Escherichia coli K12 sulfate transport
system permease W protein gi: 1788762 (150 aa). BLAST with
identity of 95% in 149 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2538982..2539815)
/gene="cysU"
/locus_tag="SF2478"
/db_xref="GeneID:1025682"
CDS complement(2538982..2539815)
/gene="cysU"
/locus_tag="SF2478"
/note="Code: P; COG: COG0555"
/codon_start=1
/transl_table=11
/product="sulfate/thiosulfate transporter subunit"
/protein_id="NP_708276.1"
/db_xref="GeneID:1025682"
/translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLSEMSW
AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
H"
misc_feature complement(2538985..2539815)
/gene="cysU"
/locus_tag="SF2478"
/note="sulfate/thiosulfate ABC transporter permease CysT;
Region: PRK10971"
/db_xref="CDD:182873"
misc_feature complement(order(2539060..2539062,2539069..2539074,
2539078..2539083,2539090..2539095,2539123..2539128,
2539165..2539170,2539177..2539188,2539207..2539209,
2539216..2539221,2539261..2539263,2539312..2539314,
2539321..2539326,2539336..2539338,2539342..2539347,
2539354..2539356,2539360..2539362,2539369..2539374,
2539468..2539470,2539474..2539479,2539486..2539515,
2539519..2539530,2539558..2539560,2539573..2539578,
2539585..2539590))
/gene="cysU"
/locus_tag="SF2478"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature complement(order(2539171..2539188,2539468..2539512))
/gene="cysU"
/locus_tag="SF2478"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature complement(order(2539093..2539095,2539123..2539125,
2539132..2539134,2539168..2539170,2539387..2539389,
2539468..2539470))
/gene="cysU"
/locus_tag="SF2478"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature complement(order(2539240..2539242,2539252..2539257,
2539273..2539311))
/gene="cysU"
/locus_tag="SF2478"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene complement(2539815..2540831)
/gene="cysP"
/locus_tag="SF2479"
/db_xref="GeneID:1025579"
CDS complement(2539815..2540831)
/gene="cysP"
/locus_tag="SF2479"
/note="Code: P; COG: COG1613"
/codon_start=1
/transl_table=11
/product="thiosulfate transporter subunit"
/protein_id="NP_708277.1"
/db_xref="GeneID:1025579"
/translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKL
IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA
QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
AGRK"
misc_feature complement(2539818..2540831)
/gene="cysP"
/locus_tag="SF2479"
/note="thiosulfate ABC transporter substrate-binding
protein CysP; Region: PRK10852"
/db_xref="CDD:236775"
misc_feature complement(order(2540181..2540183,2540238..2540243,
2540361..2540369,2540568..2540570,2540625..2540633,
2540727..2540735))
/gene="cysP"
/locus_tag="SF2479"
/note="chemical substrate binding site [chemical binding];
other site"
/db_xref="CDD:270226"
gene complement(2541135..2541926)
/gene="ucpA"
/locus_tag="SF2480"
/db_xref="GeneID:1026719"
CDS complement(2541135..2541926)
/gene="ucpA"
/locus_tag="SF2480"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="short chain dehydrogenase"
/protein_id="NP_708278.2"
/db_xref="GeneID:1026719"
/translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
DEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL
CRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
misc_feature complement(2541138..2541926)
/gene="ucpA"
/locus_tag="SF2480"
/note="SDR family oxidoreductase UcpA; Region: PRK08226"
/db_xref="CDD:181305"
gene complement(2542113..2543114)
/gene="yfeT"
/locus_tag="SF2482"
/db_xref="GeneID:1027205"
CDS complement(2542113..2543114)
/gene="yfeT"
/locus_tag="SF2482"
/note="Code: K; COG: COG1737"
/codon_start=1
/transl_table=11
/product="transcriptional regulator MurR"
/protein_id="NP_708279.1"
/db_xref="GeneID:1027205"
/translation="MFEPSVIIFSSCIGGDLTIYDQIIADVWNHISRIDRLKGIIEST
LAECEERHKNLSGIFAASPGEWKMLYLTKIRNAESEFTGNEQKIADFLRARVSELKSV
SSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHVHSSIT
SDDSLEVIARKLNREKEMALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGR
DLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQG
ATVIAITSLADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQHQ"
misc_feature complement(2542116..2542913)
/gene="yfeT"
/locus_tag="SF2482"
/note="HTH-type transcriptional regulator MurR; Region:
PRK15482"
/db_xref="CDD:185379"
gene 2543077..2543973
/gene="murQ"
/locus_tag="SF2481"
/db_xref="GeneID:1024403"
CDS 2543077..2543973
/gene="murQ"
/locus_tag="SF2481"
/note="Code: R; COG: COG2103"
/codon_start=1
/transl_table=11
/product="N-acetylmuramic acid-6-phosphate etherase"
/protein_id="NP_708280.1"
/db_xref="GeneID:1024403"
/translation="MQLEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPPAVDRV
LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
AAEAKKRLDQHGGFIRQVLDKE"
misc_feature 2543092..2543964
/gene="murQ"
/locus_tag="SF2481"
/note="N-acetylmuramic acid 6-phosphate etherase; Region:
TIGR00274"
/db_xref="CDD:272991"
gene 2543977..2545401
/gene="murP"
/locus_tag="SF2483"
/db_xref="GeneID:1025586"
CDS 2543977..2545401
/gene="murP"
/locus_tag="SF2483"
/note="Code: G; COG: COG1263"
/codon_start=1
/transl_table=11
/product="PTS system N-acetylmuramic acid transporter
subunits IIBC"
/protein_id="NP_708281.1"
/db_xref="GeneID:1025586"
/translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD
PNIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSELLGDAPVQDAAEIAAQNKRQL
KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN
FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF
FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM
PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS
LFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK
PFVTACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAG
GILVAWVCGFIFTTLFGCRNVNLD"
misc_feature 2543980..2545398
/gene="murP"
/locus_tag="SF2483"
/note="PTS system N-acetylmuramic acid transporter
subunits EIIBC; Reviewed; Region: murP; PRK09586"
/db_xref="CDD:181971"
gene complement(2545581..2546480)
/locus_tag="SF2484"
/db_xref="GeneID:1025583"
CDS complement(2545581..2546480)
/locus_tag="SF2484"
/note="Code: P; COG: COG2837"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708282.2"
/db_xref="GeneID:1025583"
/translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
KDGVDSGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTR
VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
LRFTKPVTGGYYFAPSLDKLMAL"
misc_feature complement(2545593..2546468)
/locus_tag="SF2484"
/note="Dyp-type peroxidase family; Region: Dyp_perox;
pfam04261"
/db_xref="CDD:461241"
gene complement(2546576..2547151)
/locus_tag="SF2485"
/db_xref="GeneID:1026773"
CDS complement(2546576..2547151)
/locus_tag="SF2485"
/codon_start=1
/transl_table=11
/product="RpoE-regulated lipoprotein"
/protein_id="NP_708283.1"
/db_xref="GeneID:1026773"
/translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
GVGELTASTPLQEQAIADALDGDYRLRSGMKTTNGNVVRFFEVMKGDNVAMVINGDQG
TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR"
misc_feature complement(2546579..2547151)
/locus_tag="SF2485"
/note="RpoE-regulated lipoprotein; Provisional; Region:
PRK10718"
/db_xref="CDD:236742"
gene complement(2547212..2547661)
/locus_tag="SF2486"
/db_xref="GeneID:1025590"
CDS complement(2547212..2547661)
/locus_tag="SF2486"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708284.2"
/db_xref="GeneID:1025590"
/translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASR
EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVL
LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE"
misc_feature complement(2547224..2547646)
/locus_tag="SF2486"
/note="Protein of unknown function (DUF2919); Region:
DUF2919; pfam11143"
/db_xref="CDD:431678"
gene complement(2547648..2548073)
/locus_tag="SF2487"
/db_xref="GeneID:1025585"
CDS complement(2547648..2548073)
/locus_tag="SF2487"
/note="Code: R; COG: COG0456"
/codon_start=1
/transl_table=11
/product="acetyltransferase YpeA"
/protein_id="NP_708285.2"
/db_xref="GeneID:1025585"
/translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
IQINVPEDNDMVLGMYERLGYEHADVLSLGKRLIEDEEY"
misc_feature complement(2547660..2548073)
/locus_tag="SF2487"
/note="putative acetyltransferase; Provisional; Region:
PRK03624"
/db_xref="CDD:235142"
gene 2548287..2549156
/gene="amiA"
/locus_tag="SF2488"
/db_xref="GeneID:1027212"
CDS 2548287..2549156
/gene="amiA"
/locus_tag="SF2488"
/note="Code: M; COG: COG0860"
/codon_start=1
/transl_table=11
/product="N-acetylmuramoyl-L-alanine amidase"
/protein_id="NP_708286.1"
/db_xref="GeneID:1027212"
/translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
HWFDNQKAHSKKR"
misc_feature 2548287..2549147
/gene="amiA"
/locus_tag="SF2488"
/note="N-acetylmuramoyl-L-alanine amidase AmiA; Region:
PRK10319"
/db_xref="CDD:182376"
gene 2549160..2550059
/gene="hemF"
/locus_tag="SF2489"
/db_xref="GeneID:1025580"
CDS 2549160..2550059
/gene="hemF"
/locus_tag="SF2489"
/note="Code: H; COG: COG0408"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen III oxidase"
/protein_id="NP_708287.1"
/db_xref="GeneID:1025580"
/translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG
RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVY
PRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
DYQPKDGSPEAALSEFIKVRDWG"
misc_feature 2549160..2550053
/gene="hemF"
/locus_tag="SF2489"
/note="oxygen-dependent coproporphyrinogen oxidase;
Region: PRK05330"
/db_xref="CDD:235413"
gene complement(2550065..2551117)
/gene="yfeG"
/locus_tag="SF2490"
/pseudo
/db_xref="GeneID:1025589"
misc_feature complement(2550065..2551117)
/gene="yfeG"
/locus_tag="SF2490"
/note="Similar to Escherichia coli K12 ARAC-type
regulatory protein gi: 1788778 (351 aa). BLAST with
identity of 96% in 350 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2551163..2551663)
/locus_tag="SF2491"
/db_xref="GeneID:1025612"
CDS complement(2551163..2551663)
/locus_tag="SF2491"
/codon_start=1
/transl_table=11
/product="carboxysome structural protein EutK"
/protein_id="NP_708288.2"
/db_xref="GeneID:1025612"
/translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
VVEGDLAACRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVKEPD
APVIVAESADELLALLTSVCQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
YRLKPH"
misc_feature complement(2551166..2551663)
/locus_tag="SF2491"
/note="ethanolamine utilization microcompartment protein
EutK; Region: PRK15466"
/db_xref="CDD:185363"
misc_feature complement(order(2551418..2551420,2551427..2551432,
2551436..2551438,2551442..2551450,2551541..2551549,
2551556..2551558,2551571..2551573,2551589..2551594,
2551601..2551603,2551628..2551630,2551637..2551639))
/locus_tag="SF2491"
/note="Hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:132885"
misc_feature complement(2551556..2551558)
/locus_tag="SF2491"
/note="Hexagonal pore residue [active]"
/db_xref="CDD:132885"
gene complement(2551676..2552335)
/locus_tag="SF2492"
/db_xref="GeneID:1026991"
CDS complement(2551676..2552335)
/locus_tag="SF2492"
/codon_start=1
/transl_table=11
/product="ethanolamine utilization protein EutL"
/protein_id="NP_708289.1"
/db_xref="GeneID:1026991"
/translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
A"
misc_feature complement(2551682..2552332)
/locus_tag="SF2492"
/note="ethanolamine utilization microcompartment protein
EutL; Region: PRK15405"
/db_xref="CDD:185303"
gene 2553517..2554308
/locus_tag="SF2493"
/db_xref="GeneID:1025606"
CDS 2553517..2554308
/locus_tag="SF2493"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708290.1"
/db_xref="GeneID:1025606"
/translation="MRALKIDAISLNFSHSPEWWRSGLIATLPRLDIERIIDTYIKRK
RDKFIVKIRGLHIMRISEQQRQILDYLAKNESITARQAADLVYGGNVTRVQVDAARRS
LMTMVSNGLIRKQGRAFVAERHINHAYSQDVEELRRQILWVFSKQGQEYFLSEHPNFA
AKELTVSGLSCALDYLVGEGCVTYKQLWHALNTLVEDGLLIATRENIEYWIMPRSGRR
NHARYISGNRYRTPDFNPTQEDRDRAEMMCREQEKRIMDKLFSMQ"
gene 2555028..2555423
/locus_tag="SF2494"
/db_xref="GeneID:1027207"
CDS 2555028..2555423
/locus_tag="SF2494"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708291.1"
/db_xref="GeneID:1027207"
/translation="MTNIERLERCADIMRRRWIYDPEAGLLFSRETKDVIKGSMTNKG
HLVVTVHEGKFKVTLTYQKACYVYTYGAYDETLYEVHHVNLNKQDNRIKNIRLMPKEK
HRRIHKNVRKLIRLGHTQWLQPQLIEQSL"
misc_feature <2555259..2555342
/locus_tag="SF2494"
/note="HNH nucleases; HNH endonuclease signature which is
found in viral, prokaryotic, and eukaryotic proteins. The
alignment includes members of the large group of homing
endonucleases, yeast intron 1 protein, MutS, as well as
bacterial colicins, pyocins, and...; Region: HNHc;
cl00083"
/db_xref="CDD:469607"
gene 2555441..2555704
/locus_tag="SF2495"
/db_xref="GeneID:1025601"
CDS 2555441..2555704
/locus_tag="SF2495"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708292.1"
/db_xref="GeneID:1025601"
/translation="MHSLDSYFQRTTAPKSAAQERREEFHEKVMRSADYIADKFVETV
RPLVDEVADKLQSEMPEDMEGTAKRRLICELSRRFGVSISAFK"
gene 2555727..2556269
/locus_tag="SF2496"
/db_xref="GeneID:1025605"
CDS 2555727..2556269
/locus_tag="SF2496"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708293.1"
/db_xref="GeneID:1025605"
/translation="MDAFEVLANKGAELVAQRDKTANEGERALLNKQIKAIRMAQFKL
ISNEVIETIKPQIPQIVADAIKAAGLEKRIAGLKTNAEKMEMYKQSGAPNPDEYFSPD
VEFMAQVEERLGSCLTEEQRRYFDGVDSSAGIDLNSYFGREIEHFDAAPSMPEPEPEM
ATDPEAEQRKRVFNAIGIRY"
gene 2556366..2556695
/locus_tag="SF2497"
/db_xref="GeneID:1025593"
CDS 2556366..2556695
/locus_tag="SF2497"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708294.2"
/db_xref="GeneID:1025593"
/translation="MFGNYISTSPEKIIMLALRIMQGIAKTLAEHVLDLKHSPLSKQA
MKRQTLRLWAEYSLGTINKIIDMKSGPSNQSAEEMEFIRRLILIRRDIHSQLHSVGID
INDGTGD"
gene 2556734..2556940
/locus_tag="SF2497a"
/db_xref="GeneID:16608347"
CDS 2556734..2556940
/locus_tag="SF2497a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439269.1"
/db_xref="GeneID:16608347"
/translation="MKQDIADRLEILEGQRAEAKQLRKQARRAHRNNEAELLTKYISF
TNYCIYECYKEDAEDWLDSLPEQY"
gene 2557525..2557737
/locus_tag="SF2498"
/db_xref="GeneID:1025429"
CDS 2557525..2557737
/locus_tag="SF2498"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708295.2"
/db_xref="GeneID:1025429"
/translation="MAEPEGRCVRMLSDSWSFPDSRHTLGCSTIGSSEAAMLGRLALK
WQWCKKREVQGKSTEPDLRSCANMLA"
misc_feature 2557537..>2557713
/locus_tag="SF2498"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl18945"
/db_xref="CDD:450240"
gene 2557989..2559449
/locus_tag="SF2499"
/db_xref="GeneID:1025060"
CDS 2557989..2559449
/locus_tag="SF2499"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="amino acid antiporter"
/protein_id="NP_708296.2"
/db_xref="GeneID:1025060"
/translation="MSNANIAPKSKKMTVGTLAIMNITAVVSLRFIPSEAEYGLGAIF
YYTFAAIMFLVPVAFVAAELATTYPQKGGAFRWIGEAFGARWGFVGMLMTWLQVIPYF
PTVLTFGAVSVAFIDVDMGVAESIASNKWYILFFVLFVYWGAICVALRGVGIFSQVSK
WCGIIGTIIPAIILVILGFSYLWFSGKPAVIPLGWGDLFPNIANFQNIVLAASIFLAY
AGMEMNAVHVNDLDNPTKKYPIAITIASIGTIAIFLLSTLGVAFIIPTDKISLTQSLL
VAYDMLFEWAGVPWLGSVMAFMLAIGVLGGVVTWIAGPNTGVLAIAKAGYLPKFFQKT
NRHGMGHHLMFVQGIIVSVLSVTFVIMPSVQAAFQILSQLTVMLYLVMYMLMFASAIY
LRHSQPDTKRPYRAPALFFWATLGFLGSFLAFVLSFIPPEQIPTGSPTSYVLYLLVLV
ALFLLIPILIYAFRKSDWKDPNSDFEPFSWEKRTSN"
misc_feature 2558019..2559431
/locus_tag="SF2499"
/note="putative glutamate/gamma-aminobutyrate antiporter;
Region: put_Glu_GABA_T; TIGR03813"
/db_xref="CDD:163525"
gene 2559471..2560292
/locus_tag="SF2500"
/db_xref="GeneID:1025604"
CDS 2559471..2560292
/locus_tag="SF2500"
/note="Code: M; COG: COG0796"
/codon_start=1
/transl_table=11
/product="glutamate racemase"
/protein_id="NP_708297.1"
/db_xref="GeneID:1025604"
/translation="MRLNMFSAESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNM
NAPYGNRSADDIISLTKKMLTFLQSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPI
LSIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLI
EEGNLNAPAILNDIKKHVNHLISLHPVNEIILGCTHYPIVQNFFEAVAPDIKFINPAH
DQAISIKNHLGQLNLLNSSNIGTLQINTSGSMEIYKTVLGELSITKPHTFSIRQF"
misc_feature 2559501..2560250
/locus_tag="SF2500"
/note="Glutamate racemase [Cell wall/membrane/envelope
biogenesis]; Region: MurI; COG0796"
/db_xref="CDD:440559"
mobile_element complement(2560406..2561162)
/note="partial"
/mobile_element_type="insertion sequence:iso-IS1"
gene complement(2560411..2560806)
/locus_tag="SF2501"
/db_xref="GeneID:1024022"
CDS complement(2560411..2560806)
/locus_tag="SF2501"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708298.1"
/db_xref="GeneID:1024022"
/translation="MAFICELDEQWSYVGSKARQHWLGYAYNTKTGGVLAYTFGPRTD
QTCRELLALLTPFNIGMLTSDDWGSYGREVPKNKHLTGKIFTQRIERNNLTLRTRIKR
LGRKTICFSRSVEIHEKVIGAFIEKHMFY"
misc_feature complement(2560414..2560803)
/locus_tag="SF2501"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2560833..2561105)
/locus_tag="SF2501a"
/db_xref="GeneID:16608348"
CDS complement(2560833..2561105)
/locus_tag="SF2501a"
/codon_start=1
/transl_table=11
/product="Insertion element iso-IS1N protein insA"
/protein_id="YP_008439270.1"
/db_xref="GeneID:16608348"
/translation="MTSVNIHCPRCQSAQVYRHGQNPKGRDRLRCRDCHRVFQFTYTY
QARKPGMKELITEMAFNGAGVRDTARTLKIGSNTVIRTLKNSRQSE"
misc_feature complement(<2560845..2561084)
/locus_tag="SF2501a"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(2561624..2562997)
/gene="eutA"
/locus_tag="SF2502"
/db_xref="GeneID:1025288"
CDS complement(2561624..2562997)
/gene="eutA"
/locus_tag="SF2502"
/codon_start=1
/transl_table=11
/product="reactivating factor for ethanolamine ammonia
lyase"
/protein_id="NP_708299.1"
/db_xref="GeneID:1025288"
/translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
SLGDFVVASAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANYALFDAGKISG
TACLNVGGRLLETDSQGRVVYAHKPGQMIVDECFGAGTDARSLTGAQLVQVTRRMAAL
IVEVIDGTLSPLAQALMQTGLLPAGVTPEIITLSGGVGECYRHQPANPFCFADIGPLL
ATALHDHPRLREMNVQFPAQTVRSTVIGAGAHTLSLSGSTIWLEGVQLPLRNLPVAIP
IDETDLVSAWQQALLQLDLDPKTDVYVLALPASLPVRYAAVLTVINALVDFVARFPNP
HPLLVVAGQDFGKALGMLLRPQLQQLPLAVIDEVIVRAGDYIDIGTPLFGGSVVPVTV
KSLAFPS"
misc_feature complement(2561627..2562985)
/gene="eutA"
/locus_tag="SF2502"
/note="ethanolamine ammonia-lyase reactivating factor
EutA; Region: eutA; PRK10719"
/db_xref="CDD:236743"
gene complement(2562972..2563451)
/locus_tag="SF2503"
/db_xref="GeneID:1025602"
CDS complement(2562972..2563451)
/locus_tag="SF2503"
/codon_start=1
/transl_table=11
/product="ethanolamine utilization protein EutP"
/protein_id="NP_708300.1"
/db_xref="GeneID:1025602"
/translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTLAVEFNDKGDIDT
PGEYFSHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD
MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
misc_feature complement(2562978..2563451)
/locus_tag="SF2503"
/note="ethanolamine utilization acetate kinase EutP;
Region: PRK15467"
/db_xref="CDD:185364"
misc_feature complement(2563407..2563430)
/locus_tag="SF2503"
/note="G1 box; other site"
/db_xref="CDD:206648"
misc_feature complement(order(2563062..2563070,2563146..2563148,
2563152..2563157,2563314..2563316,2563404..2563424))
/locus_tag="SF2503"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206648"
misc_feature complement(2563374..2563376)
/locus_tag="SF2503"
/note="G2 box; other site"
/db_xref="CDD:206648"
misc_feature complement(2563356..2563364)
/locus_tag="SF2503"
/note="Switch I region; other site"
/db_xref="CDD:206648"
misc_feature complement(2563314..2563325)
/locus_tag="SF2503"
/note="G3 box; other site"
/db_xref="CDD:206648"
misc_feature complement(order(2563251..2563256,2563314..2563319))
/locus_tag="SF2503"
/note="Switch II region; other site"
/db_xref="CDD:206648"
misc_feature complement(2563146..2563157)
/locus_tag="SF2503"
/note="G4 box; other site"
/db_xref="CDD:206648"
misc_feature complement(2563062..2563070)
/locus_tag="SF2503"
/note="G5 box; other site"
/db_xref="CDD:206648"
gene complement(2563464..2563871)
/locus_tag="SF2504"
/db_xref="GeneID:1025311"
CDS complement(2563464..2563871)
/locus_tag="SF2504"
/codon_start=1
/transl_table=11
/product="carboxysome structural protein EutS"
/protein_id="NP_708301.1"
/db_xref="GeneID:1025311"
/translation="MPNFVIYSDEKLSRYTKVFHRRRLMDKERIIQEFVPGKQVTLAH
LIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALV
IYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS"
misc_feature complement(2563467..2563799)
/locus_tag="SF2504"
/note="ethanolamine utilization microcompartment protein
EutS; Region: PRK15468"
/db_xref="CDD:185365"
misc_feature complement(order(2563578..2563580,2563584..2563586,
2563599..2563601,2563617..2563622,2563629..2563631,
2563656..2563658,2563665..2563667))
/locus_tag="SF2504"
/note="putative hexamer interface [polypeptide binding];
other site"
/db_xref="CDD:132886"
misc_feature complement(2563584..2563586)
/locus_tag="SF2504"
/note="putative hexagonal pore [active]"
/db_xref="CDD:132886"
gene complement(2564092..2566371)
/locus_tag="SF2505"
/db_xref="GeneID:1025596"
CDS complement(2564092..2566371)
/locus_tag="SF2505"
/codon_start=1
/transl_table=11
/product="bifunctional malic enzyme
oxidoreductase/phosphotransacetylase"
/protein_id="NP_708302.1"
/db_xref="GeneID:1025596"
/translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGVQDLSFGPEYIIPKPFDPRLIVKI
APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
EEARVLHATQELVTLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
EYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSV
VKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFG
IEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDR
MPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASV
RRIVNMVALAVVEAQTQPL"
misc_feature complement(2564104..2566365)
/locus_tag="SF2505"
/note="bifunctional malic enzyme
oxidoreductase/phosphotransacetylase; Reviewed; Region:
PRK07232"
/db_xref="CDD:235976"
gene 2566660..2567610
/gene="talA"
/locus_tag="SF2506"
/db_xref="GeneID:1026828"
CDS 2566660..2567610
/gene="talA"
/locus_tag="SF2506"
/note="Code: G; COG: COG0176"
/codon_start=1
/transl_table=11
/product="transaldolase A"
/protein_id="NP_708303.1"
/db_xref="GeneID:1026828"
/translation="MNELDGIKQFTTVVADSCDIESIRHYHPQDATANPSLLLKAAGL
SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGCVSTEVDARLSF
DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSF
TQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYE
TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS
EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
misc_feature 2566660..2567607
/gene="talA"
/locus_tag="SF2506"
/note="transaldolase A; Provisional; Region: PRK12346"
/db_xref="CDD:183458"
misc_feature order(2566705..2566707,2566753..2566755,2566759..2566764,
2566936..2566938,2566942..2566944,2567050..2567052,
2567116..2567118,2567122..2567124,2567182..2567184,
2567197..2567199)
/gene="talA"
/locus_tag="SF2506"
/note="active site"
/db_xref="CDD:188644"
misc_feature order(2566966..2566968,2567491..2567493,2567500..2567502,
2567512..2567517,2567533..2567535,2567542..2567544,
2567554..2567556)
/gene="talA"
/locus_tag="SF2506"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188644"
misc_feature 2567050..2567052
/gene="talA"
/locus_tag="SF2506"
/note="catalytic residue [active]"
/db_xref="CDD:188644"
gene 2567630..2569633
/gene="tktB"
/locus_tag="SF2507"
/db_xref="GeneID:1026776"
CDS 2567630..2569633
/gene="tktB"
/locus_tag="SF2507"
/note="Code: G; COG: COG0021"
/codon_start=1
/transl_table=11
/product="transketolase"
/protein_id="NP_708304.2"
/db_xref="GeneID:1026776"
/translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
KHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH
DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
GWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFPRRMSGGLPK
DWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGS
VSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALM
KARQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQMEAAVGWKLAVER
HNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEMEITLQA
AEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVAARVAVEAGIADYWYKYVGL
KGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHKVLGVKGA"
misc_feature 2567633..2569615
/gene="tktB"
/locus_tag="SF2507"
/note="Transketolase [Carbohydrate transport and
metabolism]; Region: TktA; COG0021"
/db_xref="CDD:439792"
gene complement(2569736..2570779)
/locus_tag="SF2508"
/db_xref="GeneID:1025597"
CDS complement(2569736..2570779)
/locus_tag="SF2508"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708305.2"
/db_xref="GeneID:1025597"
/translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVAR
NTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPDASEGEIAPRLLLDGEPLALSGDK
WRISPWLLVTDDTATITAFLQIIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG
SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL
DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQ
ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW
HGPDARPTLWITR"
misc_feature complement(2569739..2570707)
/locus_tag="SF2508"
/note="Protein of unknown function (DUF1176); Region:
DUF1176; pfam06674"
/db_xref="CDD:461982"
gene complement(2570905..2571480)
/gene="yffH"
/locus_tag="SF2509"
/db_xref="GeneID:1025501"
CDS complement(2570905..2571480)
/gene="yffH"
/locus_tag="SF2509"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="GDP-mannose pyrophosphatase NudK"
/protein_id="NP_708306.1"
/db_xref="GeneID:1025501"
/translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR
GNGATILLYNAKKKSVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAI
EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF
SQALEMIKTGEIRDGKTVLLLNYLQMSHLMD"
misc_feature complement(2570908..2571480)
/gene="yffH"
/locus_tag="SF2509"
/note="GDP-mannose pyrophosphatase NudK; Provisional;
Region: PRK15009"
/db_xref="CDD:184971"
gene complement(2571548..2573527)
/gene="yffG"
/locus_tag="SF2510"
/db_xref="GeneID:1023359"
CDS complement(2571548..2573527)
/gene="yffG"
/locus_tag="SF2510"
/note="Code: ER; COG: COG0493"
/codon_start=1
/transl_table=11
/product="oxidoreductase Fe-S binding subunit"
/protein_id="NP_708307.1"
/db_xref="GeneID:1023359"
/translation="MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITV
IKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTM
QIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLR
TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRAD
QAQREASRCLKFGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITG
RVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDLSHVTKVDKRVAIIG
AGPAGLACADVLTRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGI
HFELNCEVGKDVSLDLLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTK
QVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPG
SKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPIEG
SEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGG
DAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH"
misc_feature complement(2571566..2573527)
/gene="yffG"
/locus_tag="SF2510"
/note="putative oxidoreductase Fe-S binding subunit;
Reviewed; Region: PRK12769"
/db_xref="CDD:183733"
gene 2573733..2575421
/gene="narQ"
/locus_tag="SF2511"
/pseudo
/db_xref="GeneID:1025598"
misc_feature 2573733..2575421
/gene="narQ"
/locus_tag="SF2511"
/note="'Similar to Escherichia coli K12 sensor for nitrate
reductase system, protein histidine kinase (acts on NarP
and narL) gi: 1788812 (567 aa). BLAST with identity of 97%
in 563 aa. This CDS contains an in-frame stop codon. The
sequence has been checked and is believed to be correct.'"
/pseudo
gene 2575652..2578765
/gene="acrD"
/locus_tag="SF2512"
/db_xref="GeneID:1025315"
CDS 2575652..2578765
/gene="acrD"
/locus_tag="SF2512"
/note="Code: Q; COG: COG0841"
/codon_start=1
/transl_table=11
/product="aminoglycoside/multidrug efflux system"
/protein_id="NP_708308.1"
/db_xref="GeneID:1025315"
/translation="MANFFIDRPIFAWVLTILLCLTGTLAIFSLPVEQYPDLAPPNVR
VTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDE
AVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS
NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQ
LGGTPSVDKQALNATINAQSLLQTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYD
YLSRFNGKPASGLGVKLASSANEMATAELVLNRLDELAQYFPHGLEYKVAYETTSFVK
ASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNT
LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLS
AVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVLVAMLLTPALCATLLKPLKKGEHHGQ
KGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFLPLE
DRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVA
RMFIRLKDWSERDSKTGTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDME
LQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVD
IDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVP
FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLE
WTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLAT
WMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPI
LMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRF
PLKPRPE"
misc_feature 2575652..2578762
/gene="acrD"
/locus_tag="SF2512"
/note="multidrug efflux RND transporter permease AcrD;
Region: PRK10555"
/db_xref="CDD:182544"
gene 2579304..2579660
/gene="yffB"
/locus_tag="SF2513"
/db_xref="GeneID:1025280"
CDS 2579304..2579660
/gene="yffB"
/locus_tag="SF2513"
/note="Code: P; COG: COG1393"
/codon_start=1
/transl_table=11
/product="reductase"
/protein_id="NP_708309.1"
/db_xref="GeneID:1025280"
/translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCAPGKPM
LLGFSDSSYQQFFHEV"
misc_feature 2579304..2579657
/gene="yffB"
/locus_tag="SF2513"
/note="putative reductase; Provisional; Region: PRK10853"
/db_xref="CDD:182780"
misc_feature order(2579331..2579333,2579469..2579471,2579577..2579579,
2579619..2579621)
/gene="yffB"
/locus_tag="SF2513"
/note="putative catalytic residues [active]"
/db_xref="CDD:239333"
gene 2579664..2580791
/gene="dapE"
/locus_tag="SF2514"
/db_xref="GeneID:1025615"
CDS 2579664..2580791
/gene="dapE"
/locus_tag="SF2514"
/note="Code: E; COG: COG0624"
/codon_start=1
/transl_table=11
/product="succinyl-diaminopimelate desuccinylase"
/protein_id="NP_708310.1"
/db_xref="GeneID:1025615"
/translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD
FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
misc_feature 2579667..2580788
/gene="dapE"
/locus_tag="SF2514"
/note="succinyl-diaminopimelate desuccinylase; Reviewed;
Region: PRK13009"
/db_xref="CDD:237265"
misc_feature order(2580207..2580209,2580240..2580251,2580267..2580269,
2580273..2580278,2580285..2580290,2580294..2580299,
2580306..2580308,2580351..2580353,2580357..2580380,
2580399..2580404,2580426..2580428,2580432..2580434,
2580627..2580629)
/gene="dapE"
/locus_tag="SF2514"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:349886"
gene 2580795..2581019
/locus_tag="SF2515"
/db_xref="GeneID:1025144"
CDS 2580795..2581019
/locus_tag="SF2515"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708311.3"
/db_xref="GeneID:1025144"
/translation="MVLQEEISMDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFL
ANKPELPPHRDFNDKWDDDDDWPKKDQPKK"
misc_feature 2580819..2581004
/locus_tag="SF2515"
/note="hypothetical protein; Provisional; Region:
PRK13664"
/db_xref="CDD:184221"
gene complement(2581129..2581827)
/gene="ypfH"
/locus_tag="SF2516"
/db_xref="GeneID:1026891"
CDS complement(2581129..2581827)
/gene="ypfH"
/locus_tag="SF2516"
/note="Code: R; COG: COG0400"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="NP_708312.2"
/db_xref="GeneID:1026891"
/translation="MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPLFP
DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA
NATALIGFSQGAIMALESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP
VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDQAL
SGGKPGDDDVIEMM"
misc_feature complement(2581132..2581827)
/gene="ypfH"
/locus_tag="SF2516"
/note="putative hydrolase; Provisional; Region: PRK11460"
/db_xref="CDD:183144"
gene complement(2581901..2583916)
/gene="ypfI"
/locus_tag="SF2517"
/db_xref="GeneID:1025620"
CDS complement(2581901..2583916)
/gene="ypfI"
/locus_tag="SF2517"
/note="Code: R; COG: COG1444"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708313.1"
/db_xref="GeneID:1025620"
/translation="MAELTALYTLTAQMKREGICRLLVLSGEEGWCFDHALKLRDALP
GDWLWISPQLDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNDAILWRQNQPFSL
AHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPGVAAVTAARGRGKSALAGQLISRIAG
SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
VFNDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
GQHFLQAAGENEIAGALWLVDEGGLSQELSQAVWAGFRRPRGNLVAQSLAAHGSNPLA
ATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTHDLDYLSVSFGYTGELWRFWQRCG
FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGEMLPVD
PLNDAILSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ
LCTTLKLSGRKMLLVRQREEAAQALFALNEVRTERLRDRITQWQFFH"
misc_feature complement(2581961..2583907)
/gene="ypfI"
/locus_tag="SF2517"
/note="tRNA(Met) C34 N-acetyltransferase TmcA
[Translation, ribosomal structure and biogenesis]; Region:
TmcA; COG1444"
/db_xref="CDD:441053"
gene complement(2583931..2584794)
/locus_tag="SF2518"
/db_xref="GeneID:1025599"
CDS complement(2583931..2584794)
/locus_tag="SF2518"
/note="Code: R; COG: COG2321"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708314.1"
/db_xref="GeneID:1025599"
/translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVIQATTEDTWGQQFEKMG
KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQ
QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
PAQCNTFGKSI"
misc_feature complement(2583946..2584794)
/locus_tag="SF2518"
/note="Putative neutral zinc metallopeptidase; Region:
Zn_peptidase; pfam04228"
/db_xref="CDD:427802"
gene complement(2584962..2585675)
/gene="purC"
/locus_tag="SF2519"
/db_xref="GeneID:1026813"
CDS complement(2584962..2585675)
/gene="purC"
/locus_tag="SF2519"
/note="Code: F; COG: COG0152"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole-succinocarboxamide
synthase"
/protein_id="NP_708315.2"
/db_xref="GeneID:1026813"
/translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
GGLIEAYEAVARRLGVQLD"
misc_feature complement(2584965..2585675)
/gene="purC"
/locus_tag="SF2519"
/note="phosphoribosylaminoimidazole-succinocarboxamide
synthase; Reviewed; Region: PRK09362"
/db_xref="CDD:181800"
misc_feature complement(order(2585103..2585108,2585139..2585141,
2585307..2585309,2585418..2585420,2585424..2585426,
2585430..2585432,2585469..2585471,2585598..2585600,
2585604..2585606,2585628..2585633,2585637..2585639,
2585643..2585648,2585652..2585657))
/gene="purC"
/locus_tag="SF2519"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:133470"
misc_feature complement(order(2585079..2585090,2585103..2585105,
2585139..2585141,2585145..2585153,2585289..2585291,
2585307..2585309,2585313..2585315,2585376..2585384,
2585394..2585396,2585400..2585402,2585406..2585408,
2585418..2585420,2585424..2585435,2585466..2585468,
2585568..2585570,2585604..2585606,2585631..2585633,
2585637..2585648,2585652..2585654))
/gene="purC"
/locus_tag="SF2519"
/note="active site"
/db_xref="CDD:133470"
misc_feature complement(order(2585079..2585090,2585145..2585153,
2585289..2585291,2585313..2585315,2585376..2585384,
2585394..2585396,2585400..2585402,2585406..2585408,
2585568..2585570))
/gene="purC"
/locus_tag="SF2519"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133470"
gene complement(2585888..2586922)
/gene="nlpB"
/locus_tag="SF2520"
/db_xref="GeneID:1026777"
CDS complement(2585888..2586922)
/gene="nlpB"
/locus_tag="SF2520"
/note="Code: M; COG: COG3317"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_708316.2"
/db_xref="GeneID:1026777"
/translation="MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEA
APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGD
TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGR
YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAAN
AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
VAVFQAAFSK"
misc_feature complement(2585891..2586922)
/gene="nlpB"
/locus_tag="SF2520"
/note="outer membrane protein assembly factor BamC;
Region: PRK11679"
/db_xref="CDD:236955"
gene complement(2586939..2587817)
/gene="dapA"
/locus_tag="SF2521"
/db_xref="GeneID:1025451"
CDS complement(2586939..2587817)
/gene="dapA"
/locus_tag="SF2521"
/note="Code: EM; COG: COG0329"
/codon_start=1
/transl_table=11
/product="4-hydroxy-tetrahydrodipicolinate synthase"
/protein_id="NP_708317.2"
/db_xref="GeneID:1025451"
/translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
TGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
SGRETVRAALKHAGLL"
misc_feature complement(2586951..2587808)
/gene="dapA"
/locus_tag="SF2521"
/note="4-hydroxy-tetrahydrodipicolinate synthase; Region:
dapA; TIGR00674"
/db_xref="CDD:129757"
misc_feature complement(order(2587008..2587010,2587014..2587016,
2587071..2587076,2587404..2587406,2587410..2587412,
2587497..2587505,2587572..2587574,2587578..2587580,
2587677..2587691))
/gene="dapA"
/locus_tag="SF2521"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188637"
misc_feature complement(order(2587254..2587256,2587260..2587262,
2587335..2587337,2587404..2587406,2587419..2587421,
2587683..2587688))
/gene="dapA"
/locus_tag="SF2521"
/note="active site"
/db_xref="CDD:188637"
misc_feature complement(2587335..2587337)
/gene="dapA"
/locus_tag="SF2521"
/note="catalytic residue [active]"
/db_xref="CDD:188637"
gene 2587963..2588535
/gene="gcvR"
/locus_tag="SF2522"
/db_xref="GeneID:1025873"
CDS 2587963..2588535
/gene="gcvR"
/locus_tag="SF2522"
/note="Code: R; COG: COG2716"
/codon_start=1
/transl_table=11
/product="glycine cleavage system transcriptional
repressor"
/protein_id="NP_708318.1"
/db_xref="GeneID:1025873"
/translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
AFKALCTELNAQGSINVVNYSQHDEQDGVK"
misc_feature 2587963..2588532
/gene="gcvR"
/locus_tag="SF2522"
/note="glycine cleavage system transcriptional repressor;
Provisional; Region: gcvR; PRK11589"
/db_xref="CDD:236935"
gene 2588535..2589005
/gene="bcp"
/locus_tag="SF2523"
/db_xref="GeneID:1024383"
CDS 2588535..2589005
/gene="bcp"
/locus_tag="SF2523"
/note="Code: O; COG: COG1225"
/codon_start=1
/transl_table=11
/product="thioredoxin-dependent thiol peroxidase"
/protein_id="NP_708319.1"
/db_xref="GeneID:1024383"
/translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
misc_feature 2588535..2588996
/gene="bcp"
/locus_tag="SF2523"
/note="thioredoxin-dependent thiol peroxidase; Reviewed;
Region: bcp; PRK09437"
/db_xref="CDD:181857"
misc_feature order(2588661..2588663,2588670..2588672,2588895..2588897)
/gene="bcp"
/locus_tag="SF2523"
/note="catalytic triad [active]"
/db_xref="CDD:239315"
gene 2589258..2589875
/gene="hyfA"
/locus_tag="SF2524"
/db_xref="GeneID:1025592"
CDS 2589258..2589875
/gene="hyfA"
/locus_tag="SF2524"
/note="Code: C; COG: COG1142"
/codon_start=1
/transl_table=11
/product="hydrogenase 4 Fe-S subunit"
/protein_id="NP_708320.1"
/db_xref="GeneID:1025592"
/translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST
ITAPVVCHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGS
RPVNAHAQYVFQAEGSLKDGEENVPPQHALLRWEPGVQTVAVKCDLCDFLPEGPACVR
ACPNQALRLITDDSLQRQMKEKQRLAASWFANGGESPLSLTQEQH"
misc_feature 2589267..2589767
/gene="hyfA"
/locus_tag="SF2524"
/note="HycB, HydN and similar proteins; Region: HycB_like;
cd10554"
/db_xref="CDD:319876"
gene 2589875..2591892
/gene="hyfB"
/locus_tag="SF2525"
/pseudo
/db_xref="GeneID:1025600"
misc_feature 2589875..2591892
/gene="hyfB"
/locus_tag="SF2525"
/note="Similar to Escherichia coli K12 hydrogenase 4
membrane subunit gi: 1788827 (673 aa). BLAST with identity
of 98% in 673 aa. This CDS contains an in-frame stop
codon. The sequence has been checked and is believed to be
correct."
/pseudo
gene 2591903..2592850
/gene="hyfC"
/locus_tag="SF2526"
/db_xref="GeneID:1025609"
CDS 2591903..2592850
/gene="hyfC"
/locus_tag="SF2526"
/note="Code: C; COG: COG0650"
/codon_start=1
/transl_table=11
/product="hydrogenase 4 membrane subunit"
/protein_id="NP_708321.1"
/db_xref="GeneID:1025609"
/translation="MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRG
PGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG
GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA
GSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE
YSGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV
LASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL"
misc_feature 2591927..2592838
/gene="hyfC"
/locus_tag="SF2526"
/note="Formate hydrogenlyase subunit HyfC [Energy
production and conversion]; Region: HyfC; COG0650"
/db_xref="CDD:440415"
gene 2592867..2594306
/gene="hyfD"
/locus_tag="SF2527"
/db_xref="GeneID:1025607"
CDS 2592867..2594306
/gene="hyfD"
/locus_tag="SF2527"
/note="Code: CP; COG: COG1009"
/codon_start=1
/transl_table=11
/product="hydrogenase 4 subunit D"
/protein_id="NP_708322.1"
/db_xref="GeneID:1025607"
/translation="MENLALTTLMLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLS
LISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTD
KNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDK
AQRSALKALLITHIGSLGLYLAAATLFLQTGTFVLSAMSELHGDARYLVYGGILFAAW
GKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGM
VMTLVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIV
NHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGF
FSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAA
PLPGSMRLVLIVLIVMSLISSVIAATWLQ"
misc_feature 2592870..2594303
/gene="hyfD"
/locus_tag="SF2527"
/note="hydrogenase 4 subunit D; Validated; Region:
PRK06525"
/db_xref="CDD:180606"
gene 2594318..2594968
/gene="hyfE"
/locus_tag="SF2528"
/db_xref="GeneID:1025165"
CDS 2594318..2594968
/gene="hyfE"
/locus_tag="SF2528"
/codon_start=1
/transl_table=11
/product="hydrogenase 4 membrane subunit"
/protein_id="NP_708323.1"
/db_xref="GeneID:1025165"
/translation="MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA
ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
misc_feature 2594318..2594965
/gene="hyfE"
/locus_tag="SF2528"
/note="hydrogenase 4 membrane subunit; Provisional;
Region: hyfE; PRK11492"
/db_xref="CDD:236916"
gene 2594973..2596559
/gene="hyfF"
/locus_tag="SF2529"
/db_xref="GeneID:1025366"
CDS 2594973..2596559
/gene="hyfF"
/locus_tag="SF2529"
/note="Code: CP; COG: COG0651"
/codon_start=1
/transl_table=11
/product="hydrogenase 4 subunit F"
/protein_id="NP_708324.1"
/db_xref="GeneID:1025366"
/translation="MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGIT
LLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEV
AHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS
SLESAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLM
LLAFVFVLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII
CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVALGIGGP
LGIFAALLHTLNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGAL
ALALAGMPPFNIFLSEFMTVTAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKP
PQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRS
TWHDFLPSGTASVSEKHSER"
misc_feature 2594973..2596463
/gene="hyfF"
/locus_tag="SF2529"
/note="hydrogenase 4 subunit F; Validated; Region:
PRK06458"
/db_xref="CDD:235805"
gene 2596549..2598263
/locus_tag="SF2530"
/pseudogene="unknown"
/db_xref="GeneID:1025614"
gene 2598273..2598818
/gene="hyfH"
/locus_tag="SF2532"
/db_xref="GeneID:1025619"
CDS 2598273..2598818
/gene="hyfH"
/locus_tag="SF2532"
/note="Code: C; COG: COG1143"
/codon_start=1
/transl_table=11
/product="hydrogenase 4 subunit H"
/protein_id="NP_708327.1"
/db_xref="GeneID:1025619"
/translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG
ACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTH
KADLYTHATFHLQRCSRCERPFAPQKTVALAAELLAQQQNAPQNREMLWAQASVCPEC
KQRATLINDDTDVPLVAKEQL"
misc_feature 2598273..2598815
/gene="hyfH"
/locus_tag="SF2532"
/note="hydrogenase 4 subunit H; Validated; Region:
PRK08222"
/db_xref="CDD:181301"
gene 2598815..2599573
/gene="hyfI"
/locus_tag="SF2533"
/db_xref="GeneID:1023942"
CDS 2598815..2599573
/gene="hyfI"
/locus_tag="SF2533"
/note="Code: C; COG: COG3260"
/codon_start=1
/transl_table=11
/product="hydrogenase 4 Fe-S subunit"
/protein_id="NP_708328.1"
/db_xref="GeneID:1023942"
/translation="MSPVLTQYVSQPITLDEQTQKMKRHLLQDIRRSAYVYRIDCGGC
NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH
KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ
QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD
PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD"
misc_feature 2598902..2599306
/gene="hyfI"
/locus_tag="SF2533"
/note="Ni,Fe-hydrogenase III small subunit [Energy
production and conversion]; Region: HycG; COG3260"
/db_xref="CDD:442491"
gene 2599503..2599979
/locus_tag="SF2534"
/db_xref="GeneID:1025608"
CDS 2599503..2599979
/locus_tag="SF2534"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase maturation protein HycH"
/protein_id="NP_708329.2"
/db_xref="GeneID:1025608"
/translation="MPTIHVSIVSFSNSFAYSGGYMTEECGEIVFWTLRKKFVASSDE
MPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEYEDWLALVEEEQARRKMLGVMTF
GEIVIDASHTALLTRAFAPLADDATSVWQARSIQFIHLLDEIVLEPAIYLMARKIA"
misc_feature 2599578..2599973
/locus_tag="SF2534"
/note="formate hydrogenlyase maturation protein HycH;
Provisional; Region: PRK15084"
/db_xref="CDD:185042"
gene 2600009..2602021
/locus_tag="SF2535"
/pseudogene="unknown"
/db_xref="GeneID:1025616"
gene 2602043..2602915
/gene="focB"
/locus_tag="SF2536"
/pseudo
/db_xref="GeneID:1025610"
misc_feature 2602043..2602915
/gene="focB"
/locus_tag="SF2536"
/note="Similar to Escherichia coli K12 probable formate
transporter (formate channel 2) gi: 1788837 (283 aa).
BLAST with identity of 98% in 291 aa. This CDS ontains
frameshift. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2603009..2604070)
/gene="perM"
/locus_tag="SF2537"
/db_xref="GeneID:1025318"
CDS complement(2603009..2604070)
/gene="perM"
/locus_tag="SF2537"
/note="Code: R; COG: COG0628"
/codon_start=1
/transl_table=11
/product="permease"
/protein_id="NP_708331.1"
/db_xref="GeneID:1025318"
/translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
MPGMLNKLSDFAATLPRRYPVLMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
ATLIKAVIHAWPDGQIAQE"
misc_feature complement(2603033..2604016)
/gene="perM"
/locus_tag="SF2537"
/note="AI-2E family transporter; Region: AI-2E_transport;
pfam01594"
/db_xref="CDD:279875"
gene 2604283..2605746
/locus_tag="SF2538"
/db_xref="GeneID:1027179"
CDS 2604283..2605746
/locus_tag="SF2538"
/note="Code: O; COG: COG0501"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708332.1"
/db_xref="GeneID:1027179"
/translation="MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTL
SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLT
WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP
LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
misc_feature 2604424..2605068
/locus_tag="SF2538"
/note="Peptidase M48C Ste24p bepA-like, integral membrane
protein; Region: M48C_bepA_like; cd07333"
/db_xref="CDD:320692"
misc_feature order(2604688..2604693,2604700..2604702,2604883..2604885,
2604895..2604897,2605018..2605020)
/locus_tag="SF2538"
/note="putative active site [active]"
/db_xref="CDD:320692"
misc_feature order(2604688..2604690,2604700..2604702,2604883..2604885,
2605018..2605020)
/locus_tag="SF2538"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:320692"
misc_feature 2605201..2605602
/locus_tag="SF2538"
/note="Outer membrane protein chaperone/metalloprotease
BepA/YfgC, contains M48 and TPR domains [Cell
wall/membrane/envelope biogenesis, Posttranslational
modification, protein turnover, chaperones]; Region: BepA;
COG4783"
/db_xref="CDD:443813"
misc_feature 2605213..2605293
/locus_tag="SF2538"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature order(2605219..2605224,2605231..2605236,2605240..2605242,
2605312..2605314,2605318..2605323,2605330..2605332,
2605336..2605338,2605342..2605347,2605411..2605413,
2605420..2605425,2605432..2605437,2605444..2605446)
/locus_tag="SF2538"
/note="putative protein binding surface [polypeptide
binding]; other site"
/db_xref="CDD:276809"
misc_feature 2605306..2605398
/locus_tag="SF2538"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature 2605408..2605485
/locus_tag="SF2538"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
gene 2605767..2606126
/locus_tag="SF2539"
/db_xref="GeneID:1026779"
CDS 2605767..2606126
/locus_tag="SF2539"
/note="Code: P; COG: COG1393"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_708333.1"
/db_xref="GeneID:1026779"
/translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIMVAN
GKARIGRPPEQVLEIVG"
misc_feature 2605779..2606117
/locus_tag="SF2539"
/note="Arsenate Reductase (ArsC) family, ArsC subfamily;
arsenic reductases similar to that encoded by arsC on the
R733 plasmid of Escherichia coli. E. coli ArsC catalyzes
the reduction of arsenate [As(V)] to arsenite [As(III)],
the first step in the...; Region: ArsC_ArsC; cd03034"
/db_xref="CDD:239332"
misc_feature order(2605803..2605805,2605950..2605952,2606052..2606054,
2606091..2606093)
/locus_tag="SF2539"
/note="catalytic residues [active]"
/db_xref="CDD:239332"
gene complement(2606259..2607005)
/locus_tag="SF2540"
/db_xref="GeneID:1025084"
CDS complement(2606259..2607005)
/locus_tag="SF2540"
/note="Code: L; COG: COG0593"
/codon_start=1
/transl_table=11
/product="DNA replication initiation factor"
/protein_id="NP_708334.1"
/db_xref="GeneID:1025084"
/translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
LFMTLDQLDRASITAQRKLTIPFVKEILKL"
misc_feature complement(2606262..2606966)
/locus_tag="SF2540"
/note="DnaA inactivator Hda; Region: PRK08084"
/db_xref="CDD:181224"
gene complement(2607055..2608344)
/gene="uraA"
/locus_tag="SF2541"
/db_xref="GeneID:1026732"
CDS complement(2607055..2608344)
/gene="uraA"
/locus_tag="SF2541"
/note="Code: F; COG: COG2233"
/codon_start=1
/transl_table=11
/product="uracil transporter"
/protein_id="NP_708335.2"
/db_xref="GeneID:1026732"
/translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPNSKTII
ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
ALATIVGIGLSLIFKLISVLRPEKVVLDAEDADITDK"
misc_feature complement(2607058..2608341)
/gene="uraA"
/locus_tag="SF2541"
/note="uracil transporter; Provisional; Region: PRK10720"
/db_xref="CDD:236744"
gene complement(2608430..2609056)
/gene="upp"
/locus_tag="SF2542"
/db_xref="GeneID:1026868"
CDS complement(2608430..2609056)
/gene="upp"
/locus_tag="SF2542"
/note="Code: F; COG: COG0035"
/codon_start=1
/transl_table=11
/product="uracil phosphoribosyltransferase"
/protein_id="NP_708336.2"
/db_xref="GeneID:1026868"
/translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
misc_feature complement(2608433..2609056)
/gene="upp"
/locus_tag="SF2542"
/note="uracil phosphoribosyltransferase; Reviewed; Region:
upp; PRK00129"
/db_xref="CDD:234653"
misc_feature complement(order(2608571..2608573,2608643..2608657,
2608661..2608669,2608820..2608822,2608826..2608828))
/gene="upp"
/locus_tag="SF2542"
/note="active site"
/db_xref="CDD:206754"
gene 2609365..2610417
/gene="purM"
/locus_tag="SF2543"
/db_xref="GeneID:1024382"
CDS 2609365..2610417
/gene="purM"
/locus_tag="SF2543"
/note="Code: F; COG: COG0150"
/codon_start=1
/transl_table=11
/product="phosphoribosylaminoimidazole synthetase"
/protein_id="NP_708337.1"
/db_xref="GeneID:1024382"
/translation="MGTQAVTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVM
GGLGGFGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVV
QGAEPLFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYD
VAGFCVGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTEL
DGKPLADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDE
SSWQWPEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWK
IGIIKASDSEQRVVIE"
misc_feature 2609386..2610411
/gene="purM"
/locus_tag="SF2543"
/note="Phosphoribosylaminoimidazole (AIR) synthetase
[Nucleotide transport and metabolism]; Region: PurM;
COG0150"
/db_xref="CDD:439920"
gene 2610417..2611055
/gene="purN"
/locus_tag="SF2544"
/db_xref="GeneID:1025613"
CDS 2610417..2611055
/gene="purN"
/locus_tag="SF2544"
/note="Code: F; COG: COG0299"
/codon_start=1
/transl_table=11
/product="phosphoribosylglycinamide formyltransferase"
/protein_id="NP_708338.1"
/db_xref="GeneID:1025613"
/translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
TEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE"
misc_feature 2610417..2611019
/gene="purN"
/locus_tag="SF2544"
/note="Folate-dependent phosphoribosylglycinamide
formyltransferase PurN [Nucleotide transport and
metabolism]; Region: PurN; COG0299"
/db_xref="CDD:440068"
gene 2611227..2613293
/gene="ppk"
/locus_tag="SF2545"
/db_xref="GeneID:1026789"
CDS 2611227..2613293
/gene="ppk"
/locus_tag="SF2545"
/note="Code: P; COG: COG0855"
/codon_start=1
/transl_table=11
/product="polyphosphate kinase"
/protein_id="NP_708339.2"
/db_xref="GeneID:1026789"
/translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
NLDEFYKVRFAELKRRIIISEEQGSNAHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
IIRSDSIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
CSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
ATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
SLEQPE"
misc_feature 2611245..2613266
/gene="ppk"
/locus_tag="SF2545"
/note="polyphosphate kinase 1; Region: poly_P_kin;
TIGR03705"
/db_xref="CDD:274734"
gene 2613298..2614839
/gene="ppx"
/locus_tag="SF2546"
/db_xref="GeneID:1025627"
CDS 2613298..2614839
/gene="ppx"
/locus_tag="SF2546"
/note="Code: FP; COG: COG0248"
/codon_start=1
/transl_table=11
/product="exopolyphosphatase"
/protein_id="NP_708340.1"
/db_xref="GeneID:1025627"
/translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
KRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
TIKAAHEVLMEMGEKDGIITPERLEKLVKEILRHRNFASLSLPGLSEERKTVFVPGLA
ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS
DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
PEIAA"
misc_feature 2613298..2614836
/gene="ppx"
/locus_tag="SF2546"
/note="exopolyphosphatase; Provisional; Region: PRK10854"
/db_xref="CDD:182781"
misc_feature complement(2614878..2618388)
/note="Similar to Escherichia coli K12 cytochrome C-type
biogenesis protein gi: 1788849 (748 aa). BLAST with
identity of 99% in 1170 aa. This CDS has been disrupted by
insertion. The sequence has been checked and is believed
to be correct."
mobile_element 2615989..2617252
/mobile_element_type="insertion sequence:IS600"
gene 2616053..2616355
/locus_tag="SF2547"
/db_xref="GeneID:1023999"
CDS 2616053..2616355
/locus_tag="SF2547"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_708341.1"
/db_xref="GeneID:1023999"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 2616053..2616325
/locus_tag="SF2547"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2616391..2617209
/locus_tag="SF2548"
/db_xref="GeneID:1023580"
CDS 2616391..2617209
/locus_tag="SF2548"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_708342.1"
/db_xref="GeneID:1023580"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKPEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature <2616391..2617182
/locus_tag="SF2548"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2618570..2618722)
/locus_tag="SF2548a"
/db_xref="GeneID:16608349"
CDS complement(2618570..2618722)
/locus_tag="SF2548a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439271.1"
/db_xref="GeneID:16608349"
/translation="MSHAVDGTYIKAQQDKMVNSSLCKKASVDTYFNVMEVNLIIYND
DVIMMN"
gene 2618740..2618931
/locus_tag="SF2550"
/db_xref="GeneID:1025611"
CDS 2618740..2618931
/locus_tag="SF2550"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708343.1"
/db_xref="GeneID:1025611"
/translation="MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHH
QSKKEAQQSTLSVESPVQR"
misc_feature 2618758..2618886
/locus_tag="SF2550"
/note="Protein of unknown function (DUF2633); Region:
DUF2633; pfam11119"
/db_xref="CDD:463225"
gene 2619242..2619760
/locus_tag="SF2551"
/db_xref="GeneID:1027587"
CDS 2619242..2619760
/locus_tag="SF2551"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="NP_708344.1"
/db_xref="GeneID:1027587"
/translation="MMKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQE
TKTVNIISILPAKVAVDNSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVG
GGAVGAAAGSMVNDKTLVEGVSLTYKEGTKVYTSTQEGKECQFTTGLAVVITTTYNET
RIQPNTKCPEKS"
misc_feature 2619254..2619736
/locus_tag="SF2551"
/note="Outer membrane lipoprotein SlyB [Cell
wall/membrane/envelope biogenesis]; Region: SlyB; COG3133"
/db_xref="CDD:442367"
gene 2619776..2620315
/locus_tag="SF2552"
/db_xref="GeneID:1025622"
CDS 2619776..2620315
/locus_tag="SF2552"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708345.1"
/db_xref="GeneID:1025622"
/translation="MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQH
DEWVAERNREIQQEKQRRANAQAAANKRAATAAANKKARQDKLDAEATADKKRDQSYE
DELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGR
DLMKSVGKAEENKSDSWFN"
misc_feature 2619872..2620309
/locus_tag="SF2552"
/note="Family of unknown function (DUF5384); Region:
DUF5384; pfam17358"
/db_xref="CDD:407453"
gene complement(2620410..2621987)
/gene="guaA"
/locus_tag="SF2553"
/db_xref="GeneID:1025630"
CDS complement(2620410..2621987)
/gene="guaA"
/locus_tag="SF2553"
/note="Code: F; COG: COG0519"
/codon_start=1
/transl_table=11
/product="GMP synthase"
/protein_id="NP_708346.1"
/db_xref="GeneID:1025630"
/translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPIFGVCYGMQTMAMQLGGHVEA
SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAV
ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTV
FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
RVVYDISGKPPATIEWE"
misc_feature complement(2620413..2621975)
/gene="guaA"
/locus_tag="SF2553"
/note="GMP synthase; Reviewed; Region: guaA; PRK00074"
/db_xref="CDD:234614"
gene complement(2622056..2623522)
/gene="guaB"
/locus_tag="SF2554"
/db_xref="GeneID:1027589"
CDS complement(2622056..2623522)
/gene="guaB"
/locus_tag="SF2554"
/codon_start=1
/transl_table=11
/product="inosine 5'-monophosphate dehydrogenase"
/protein_id="NP_708347.2"
/db_xref="GeneID:1027589"
/translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
misc_feature complement(2622104..2623501)
/gene="guaB"
/locus_tag="SF2554"
/note="IMP dehydrogenase / GMP reductase domain; Region:
IMPDH; pfam00478"
/db_xref="CDD:459826"
gene 2623684..2625054
/gene="xseA"
/locus_tag="SF2555"
/db_xref="GeneID:1025633"
CDS 2623684..2625054
/gene="xseA"
/locus_tag="SF2555"
/note="Code: L; COG: COG1570"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease VII large subunit"
/protein_id="NP_708348.2"
/db_xref="GeneID:1025633"
/translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
QPAGEGLLQQKYEQLKAKLQAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
KRRDPSLPVIIYPTSVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
ARQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
KRAGQQQQRLTQRLNQQNPQPKIHRTQTRIQQLEYRLAEILRAQLSATRERFGNAVTH
LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEMLTTRLEDGWIESEVKNIQPVKK
SRKKVH"
misc_feature 2623696..2625024
/gene="xseA"
/locus_tag="SF2555"
/note="Exonuclease VII, large subunit [Replication,
recombination and repair]; Region: XseA; COG1570"
/db_xref="CDD:441178"
gene complement(2625051..2625302)
/locus_tag="SF2556"
/db_xref="GeneID:1025885"
CDS complement(2625051..2625302)
/locus_tag="SF2556"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708349.1"
/db_xref="GeneID:1025885"
/translation="MNVEGMATGGIHMELHCPKCQHVLDQDNGHARCPSCGEFIEMKA
LCPDCHQPLQVLKACGAVDYFCQHGHGLISKKRVEFVLA"
misc_feature complement(2625063..2625254)
/locus_tag="SF2556"
/note="Region: zinc-ribbons_6; pfam07191"
/db_xref="CDD:429341"
gene complement(2625335..2626807)
/gene="engA"
/locus_tag="SF2557"
/db_xref="GeneID:1026778"
CDS complement(2625335..2626807)
/gene="engA"
/locus_tag="SF2557"
/note="Code: R; COG: COG1160"
/codon_start=1
/transl_table=11
/product="GTP-binding protein Der"
/protein_id="NP_708350.2"
/db_xref="GeneID:1026778"
/translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
AKHLRSREKPTFLVVNKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
PWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIMKNK"
misc_feature complement(2625422..2626801)
/gene="engA"
/locus_tag="SF2557"
/note="GTP-binding protein Der; Reviewed; Region:
PRK00093"
/db_xref="CDD:234628"
gene complement(2626925..2628103)
/locus_tag="SF2558"
/db_xref="GeneID:1026782"
CDS complement(2626925..2628103)
/locus_tag="SF2558"
/note="Code: S; COG: COG1520"
/codon_start=1
/transl_table=11
/product="outer membrane biogenesis protein BamB"
/protein_id="NP_708351.1"
/db_xref="GeneID:1026782"
/translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG
WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG
LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWAQSDLLHRLLTSPVLYN
GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
"
misc_feature complement(2626928..2628067)
/locus_tag="SF2558"
/note="outer membrane biogenesis protein BamB;
Provisional; Region: PRK11138"
/db_xref="CDD:236857"
misc_feature complement(order(2627030..2627032,2627039..2627047,
2627054..2627056,2627060..2627062,2627153..2627155,
2627162..2627170,2627177..2627179,2627183..2627185,
2627267..2627269,2627276..2627284,2627291..2627293,
2627297..2627299,2627420..2627422,2627429..2627437,
2627444..2627446,2627450..2627452,2627555..2627557,
2627564..2627572,2627579..2627581,2627585..2627587,
2627675..2627677,2627684..2627692,2627699..2627701,
2627705..2627707,2627825..2627827,2627834..2627842,
2627849..2627851,2627855..2627857,2627960..2627962,
2627969..2627977))
/locus_tag="SF2558"
/note="Trp docking motif [polypeptide binding]; other
site"
/db_xref="CDD:199833"
misc_feature complement(order(2627123..2627125,2627315..2627317,
2627513..2627515,2627600..2627605,2627648..2627650,
2627765..2627767,2627780..2627782,2627918..2627920))
/locus_tag="SF2558"
/note="active site"
/db_xref="CDD:199833"
gene complement(2628114..2628734)
/locus_tag="SF2559"
/db_xref="GeneID:1027585"
CDS complement(2628114..2628734)
/locus_tag="SF2559"
/note="Code: S; COG: COG2976"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708352.1"
/db_xref="GeneID:1027585"
/translation="MEIYENENDQVEAVKRFFAENGKALAVGGILGVGALTGWRYWNS
HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV
ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
misc_feature complement(2628123..2628734)
/locus_tag="SF2559"
/note="Putative negative regulator of RcsB-dependent
stress response, UPF0070 family [Signal transduction
mechanisms]; Region: YfgM; COG2976"
/db_xref="CDD:442215"
gene complement(2628752..2630026)
/gene="hisS"
/locus_tag="SF2560"
/db_xref="GeneID:1025634"
CDS complement(2628752..2630026)
/gene="hisS"
/locus_tag="SF2560"
/note="Code: J; COG: COG0124"
/codon_start=1
/transl_table=11
/product="histidyl-tRNA synthetase"
/protein_id="NP_708353.1"
/db_xref="GeneID:1025634"
/translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGIFEH
VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL
LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLV
ASGADTQSAAMALAERLRDELLGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
ANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
misc_feature complement(2628755..2630023)
/gene="hisS"
/locus_tag="SF2560"
/note="Histidyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: HisS; COG0124"
/db_xref="CDD:439894"
gene complement(2630129..2631256)
/gene="ispG"
/locus_tag="SF2561"
/db_xref="GeneID:1025629"
CDS complement(2630129..2631256)
/gene="ispG"
/locus_tag="SF2561"
/note="Code: M; COG: COG0821"
/codon_start=1
/transl_table=11
/product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase (flavodoxin)"
/protein_id="NP_708354.1"
/db_xref="GeneID:1025629"
/translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGV
DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVGKIIT"
misc_feature complement(2630180..2631256)
/gene="ispG"
/locus_tag="SF2561"
/note="flavodoxin-dependent
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;
Region: ispG; PRK00366"
/db_xref="CDD:234737"
gene complement(2631283..2632296)
/gene="yfgA"
/locus_tag="SF2562"
/db_xref="GeneID:1024372"
CDS complement(2631283..2632296)
/gene="yfgA"
/locus_tag="SF2562"
/note="Code: S; COG: COG1426"
/codon_start=1
/transl_table=11
/product="cytoskeletal protein RodZ"
/protein_id="NP_708355.1"
/db_xref="GeneID:1024372"
/translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSL
GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
DTAATPVPTAATTPDGAAPLPTDQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLF
SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
PAQ"
misc_feature complement(2631301..2632296)
/gene="yfgA"
/locus_tag="SF2562"
/note="cytoskeleton protein RodZ; Region: PRK10856"
/db_xref="CDD:236776"
gene complement(2632581..2633735)
/gene="yfgB"
/locus_tag="SF2563"
/db_xref="GeneID:1026797"
CDS complement(2632581..2633735)
/gene="yfgB"
/locus_tag="SF2563"
/note="Code: R; COG: COG0820"
/codon_start=1
/transl_table=11
/product="ribosomal RNA large subunit methyltransferase N"
/protein_id="NP_708356.1"
/db_xref="GeneID:1026797"
/translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKTFRADQ
VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPDAPYGRSSNSRIDRFSKVL
MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
misc_feature complement(2632584..2633699)
/gene="yfgB"
/locus_tag="SF2563"
/note="ribosomal RNA large subunit methyltransferase N;
Provisional; Region: PRK11194"
/db_xref="CDD:183031"
misc_feature complement(order(2632803..2632808,2632905..2632907,
2633037..2633039,2633097..2633105,2633196..2633201,
2633205..2633207,2633337..2633345,2633349..2633351,
2633355..2633357,2633361..2633363))
/gene="yfgB"
/locus_tag="SF2563"
/note="FeS/SAM binding site [active]"
/db_xref="CDD:100105"
gene complement(2633885..2634316)
/gene="ndk"
/locus_tag="SF2564"
/db_xref="GeneID:1027584"
CDS complement(2633885..2634316)
/gene="ndk"
/locus_tag="SF2564"
/note="Code: F; COG: COG0105"
/codon_start=1
/transl_table=11
/product="mulitfunctional nucleoside diphosphate
kinase/apyrimidinic endonuclease/3'-phosphodiesterase"
/protein_id="NP_708357.1"
/db_xref="GeneID:1027584"
/translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
misc_feature complement(2633894..2634313)
/gene="ndk"
/locus_tag="SF2564"
/note="Nucleoside diphosphate kinase [Nucleotide transport
and metabolism]; Region: Ndk; COG0105"
/db_xref="CDD:439875"
gene complement(2634466..2636580)
/locus_tag="SF2565"
/db_xref="GeneID:1025896"
CDS complement(2634466..2636580)
/locus_tag="SF2565"
/note="Code: M; COG: COG0744; peptidoglycan synthetase"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein 1B-like protein"
/protein_id="NP_708358.1"
/db_xref="GeneID:1025896"
/translation="MLDNLIGARYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSG
RVISGGSTLTMQVARLLDPHPKTFGGKILQLWRALQLEWHLSKREILILYLNRAPFGG
TLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQVPSRLRPDRWPERAEAARNKVLERM
AAQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTLDAGLQRRL
EELAQNWKGRLPPRSSLAMIVVNHTDMRVRGWVGSVDLNDDSRFGHVDMVNAIRSPGS
VLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPINMSEALVRSLNLP
AVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARH
GKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPLAWKTGTSY
GYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLSRSANLPED
PRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLSEQEGINGIRFPI
WLDDKGQRVAADCPQAKQEMVNVWPLPLEPWLPASERRAVRLPPASTICPPYGHDAQL
PLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRNVTLHLTDK
GDYQLLVMDDVGQIATVKFVMQ"
misc_feature complement(2634469..2636556)
/locus_tag="SF2565"
/note="penicillin-binding protein 1C; Provisional; Region:
PRK11240"
/db_xref="CDD:183049"
mobile_element 2636556..2637925
/mobile_element_type="insertion sequence:ISSfl2"
gene complement(2636565..2637779)
/locus_tag="SF2566"
/pseudogene="unknown"
/db_xref="GeneID:1025621"
gene 2638009..2638491
/gene="sseA"
/locus_tag="SF2568"
/pseudo
/db_xref="GeneID:1025626"
misc_feature 2638009..2638491
/gene="sseA"
/locus_tag="SF2568"
/note="Similar to Escherichia coli K12 thiosulfate
sulfurtransferase gi: 1788869 (335 aa). BLAST with
identity of 98% in 161 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2639310..2640086)
/gene="sseB"
/locus_tag="SF2569"
/db_xref="GeneID:1025631"
CDS complement(2639310..2640086)
/gene="sseB"
/locus_tag="SF2569"
/codon_start=1
/transl_table=11
/product="enhanced serine sensitivity protein SseB"
/protein_id="NP_708361.2"
/db_xref="GeneID:1025631"
/translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE
AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT
LFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPID
ICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII"
misc_feature complement(2639319..2640056)
/gene="sseB"
/locus_tag="SF2569"
/note="enhanced serine sensitivity protein SseB;
Provisional; Region: PRK11611"
/db_xref="CDD:183229"
gene complement(2640228..2641511)
/gene="pepB"
/locus_tag="SF2570"
/db_xref="GeneID:1023954"
CDS complement(2640228..2641511)
/gene="pepB"
/locus_tag="SF2570"
/note="Code: E; COG: COG0260"
/codon_start=1
/transl_table=11
/product="aminopeptidase"
/protein_id="NP_708362.1"
/db_xref="GeneID:1023954"
/translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKGPKGTRKVEWPDLDDAQRQELDN
RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
HTVGRGSERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
MGGAATVTGALAFAIMRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS
ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
misc_feature complement(2640231..2641499)
/gene="pepB"
/locus_tag="SF2570"
/note="aminopeptidase B; Provisional; Region: PRK05015"
/db_xref="CDD:235330"
gene complement(2641570..2641770)
/gene="yfhJ"
/locus_tag="SF2571"
/db_xref="GeneID:1027588"
CDS complement(2641570..2641770)
/gene="yfhJ"
/locus_tag="SF2571"
/note="Code: S; COG: COG2975"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708363.1"
/db_xref="GeneID:1027588"
/translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
DPQASNEKILEAILLVWLDEAE"
misc_feature complement(2641573..2641770)
/gene="yfhJ"
/locus_tag="SF2571"
/note="hypothetical protein; Provisional; Region:
PRK10721"
/db_xref="CDD:170660"
gene complement(2641782..2642117)
/gene="fdx"
/locus_tag="SF2572"
/db_xref="GeneID:1025336"
CDS complement(2641782..2642117)
/gene="fdx"
/locus_tag="SF2572"
/note="Code: C; COG: COG0633"
/codon_start=1
/transl_table=11
/product="[2FE-2S] ferredoxin electron carrer protein"
/protein_id="NP_708364.1"
/db_xref="GeneID:1025336"
/translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
YTINHAREH"
misc_feature complement(2641785..2642114)
/gene="fdx"
/locus_tag="SF2572"
/note="ferredoxin, 2Fe-2S type, ISC system; Region:
fdx_isc; TIGR02007"
/db_xref="CDD:131062"
misc_feature complement(order(2641857..2641862,2641965..2641976,
2641983..2641985,2641992..2641994,2642001..2642006))
/gene="fdx"
/locus_tag="SF2572"
/note="catalytic loop [active]"
/db_xref="CDD:238126"
misc_feature complement(order(2641857..2641859,2641965..2641967,
2641974..2641976,2641992..2641994))
/gene="fdx"
/locus_tag="SF2572"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:238126"
gene complement(2642119..2643969)
/gene="hscA"
/locus_tag="SF2573"
/db_xref="GeneID:1025920"
CDS complement(2642119..2643969)
/gene="hscA"
/locus_tag="SF2573"
/note="Code: O; COG: COG0443"
/codon_start=1
/transl_table=11
/product="chaperone protein HscA"
/protein_id="NP_708365.2"
/db_xref="GeneID:1025920"
/translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQADIPDRSDNRVQRELLDATIAAKI
ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDNAA
AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV"
misc_feature complement(2642122..2643969)
/gene="hscA"
/locus_tag="SF2573"
/note="chaperone protein HscA; Provisional; Region: hscA;
PRK05183"
/db_xref="CDD:235360"
gene complement(2643986..2644501)
/gene="hscB"
/locus_tag="SF2574"
/db_xref="GeneID:1025641"
CDS complement(2643986..2644501)
/gene="hscB"
/locus_tag="SF2574"
/note="Code: O; COG: COG1076"
/codon_start=1
/transl_table=11
/product="co-chaperone HscB"
/protein_id="NP_708366.1"
/db_xref="GeneID:1025641"
/translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSLAEQ
LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNEAWDAAADTVRKLRFLDKLRSS
AEQLEEKLLDF"
misc_feature complement(2643992..2644501)
/gene="hscB"
/locus_tag="SF2574"
/note="co-chaperone HscB; Provisional; Region: hscB;
PRK05014"
/db_xref="CDD:179914"
gene complement(2644597..2644920)
/gene="iscA"
/locus_tag="SF2575"
/db_xref="GeneID:1025895"
CDS complement(2644597..2644920)
/gene="iscA"
/locus_tag="SF2575"
/note="Code: S; COG: COG0316"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster assembly protein"
/protein_id="NP_708367.2"
/db_xref="GeneID:1025895"
/translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
ESFHV"
misc_feature complement(2644600..2644920)
/gene="iscA"
/locus_tag="SF2575"
/note="iron-sulfur cluster assembly protein IscA; Region:
iscA; PRK09502"
/db_xref="CDD:181914"
gene complement(2644937..2645323)
/locus_tag="SF2576"
/db_xref="GeneID:1026942"
CDS complement(2644937..2645323)
/locus_tag="SF2576"
/note="Code: C; COG: COG0822"
/codon_start=1
/transl_table=11
/product="scaffold protein"
/protein_id="NP_708368.1"
/db_xref="GeneID:1026942"
/translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV
KIHCSILAEDAIKAAIADYKSKREAK"
misc_feature complement(2644946..2645317)
/locus_tag="SF2576"
/note="FeS cluster assembly scaffold IscU; Region: iscU;
TIGR01999"
/db_xref="CDD:188192"
misc_feature complement(order(2645006..2645011,2645015..2645020,
2645129..2645131,2645135..2645137,2645210..2645215,
2645297..2645302,2645309..2645317))
/locus_tag="SF2576"
/note="trimerization site [polypeptide binding]; other
site"
/db_xref="CDD:143480"
misc_feature complement(order(2645006..2645008,2645135..2645137,
2645213..2645215))
/locus_tag="SF2576"
/note="active site"
/db_xref="CDD:143480"
gene complement(2645351..2646565)
/gene="yfhO"
/locus_tag="SF2577"
/db_xref="GeneID:1026950"
CDS complement(2645351..2646565)
/gene="yfhO"
/locus_tag="SF2577"
/note="Code: E; COG: COG1104"
/codon_start=1
/transl_table=11
/product="cysteine desulfurase"
/protein_id="NP_708369.2"
/db_xref="GeneID:1026950"
/translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG
WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
GVDLNSIEWAHH"
misc_feature complement(2645354..2646565)
/gene="yfhO"
/locus_tag="SF2577"
/note="IscS subfamily cysteine desulfurase; Region:
PRK14012"
/db_xref="CDD:184450"
misc_feature complement(order(2645948..2645950,2645957..2645959,
2646017..2646019,2646026..2646028,2646110..2646112,
2646329..2646331,2646338..2646343))
/gene="yfhO"
/locus_tag="SF2577"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99746"
misc_feature complement(2645948..2645950)
/gene="yfhO"
/locus_tag="SF2577"
/note="catalytic residue [active]"
/db_xref="CDD:99746"
gene complement(2646677..2647165)
/locus_tag="SF2578"
/db_xref="GeneID:1026947"
CDS complement(2646677..2647165)
/locus_tag="SF2578"
/note="Code: K; COG: COG1959"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator IscR"
/protein_id="NP_708370.1"
/db_xref="GeneID:1026947"
/translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL
RA"
misc_feature complement(2646680..2647165)
/locus_tag="SF2578"
/note="Fe-S cluster assembly transcriptional regulator
IscR; Region: PRK10857"
/db_xref="CDD:236777"
gene complement(2647435..2648175)
/locus_tag="SF2579"
/db_xref="GeneID:1027574"
CDS complement(2647435..2648175)
/locus_tag="SF2579"
/note="Code: J; COG: COG0565"
/codon_start=1
/transl_table=11
/product="tRNA (cytidine/uridine-2'-O-)-methyltransferase
TrmJ"
/protein_id="NP_708371.1"
/db_xref="GeneID:1027574"
/translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
ARPESQELNILRGILASIEQQNKGNKAE"
misc_feature complement(2647444..2648175)
/locus_tag="SF2579"
/note="tRNA (cytidine/uridine-2'-O-)-methyltransferase
TrmJ; Provisional; Region: PRK15114"
/db_xref="CDD:185069"
gene 2648294..2649097
/gene="suhB"
/locus_tag="SF2580"
/db_xref="GeneID:1025647"
CDS 2648294..2649097
/gene="suhB"
/locus_tag="SF2580"
/note="Code: G; COG: COG0483"
/codon_start=1
/transl_table=11
/product="inositol monophosphatase"
/protein_id="NP_708372.1"
/db_xref="GeneID:1025647"
/translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
KAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAILANMRDELSDALKH"
misc_feature 2648294..2649091
/gene="suhB"
/locus_tag="SF2580"
/note="inositol-1-monophosphatase; Region: PRK10757"
/db_xref="CDD:236753"
misc_feature order(2648393..2648395,2648405..2648407,2648423..2648425,
2648492..2648497,2648543..2648560,2648924..2648929)
/gene="suhB"
/locus_tag="SF2580"
/note="active site"
/db_xref="CDD:238817"
misc_feature order(2648402..2648404,2648408..2648410,2648561..2648566,
2648570..2648587,2648741..2648749,2648753..2648755,
2648759..2648764,2648786..2648791,2648798..2648800,
2648807..2648812,2648819..2648821,2648831..2648851,
2648873..2648875,2648885..2648896)
/gene="suhB"
/locus_tag="SF2580"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238817"
gene 2649242..2650096
/locus_tag="SF2581"
/db_xref="GeneID:1025643"
CDS 2649242..2650096
/locus_tag="SF2581"
/note="Code: R; COG: COG1073"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708373.2"
/db_xref="GeneID:1025643"
/translation="MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP
ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQQLVLFGQSIGGA
NILAVIGQGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP
LLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGNVYREQMVDFI
LSALNPQN"
misc_feature 2649344..2650081
/locus_tag="SF2581"
/note="Fermentation-respiration switch esterase FrsA,
DUF1100 family [Signal transduction mechanisms]; Region:
FrsA; COG1073"
/db_xref="CDD:440691"
gene 2650287..2651567
/gene="csiE"
/locus_tag="SF2582"
/db_xref="GeneID:1025635"
CDS 2650287..2651567
/gene="csiE"
/locus_tag="SF2582"
/codon_start=1
/transl_table=11
/product="stationary phase inducible protein CsiE"
/protein_id="NP_708374.2"
/db_xref="GeneID:1025635"
/translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDD
DIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI
TSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCL
LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQHVPPDEPLFMALLFSML
RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYIHLAQALNRSLF
AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN
DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP
YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA"
misc_feature 2650287..2651564
/gene="csiE"
/locus_tag="SF2582"
/note="stationary phase inducible protein CsiE;
Provisional; Region: PRK11564"
/db_xref="CDD:236932"
gene complement(2651559..2652698)
/gene="hcaT"
/locus_tag="SF2583"
/db_xref="GeneID:1025637"
CDS complement(2651559..2652698)
/gene="hcaT"
/locus_tag="SF2583"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="3-phenylpropionic acid transporter"
/protein_id="NP_708375.1"
/db_xref="GeneID:1025637"
/translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
LGAGLVARFLGSLLIAPRVSDPSRLISALRVLALLPLLFAVAFWAGAHVAWLMLVMIG
FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVIL
VLLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAH
AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
GVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQVSEVIRLQAVYSAVA
MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
misc_feature complement(2651565..2652698)
/gene="hcaT"
/locus_tag="SF2583"
/note="3-phenylpropionate MFS transporter; Region:
PRK11128"
/db_xref="CDD:236856"
misc_feature complement(order(2651670..2651672,2651679..2651684,
2651691..2651696,2651703..2651705,2651763..2651765,
2651775..2651777,2651787..2651792,2651937..2651939,
2651949..2651951,2652030..2652032,2652039..2652047,
2652054..2652059,2652066..2652068,2652279..2652281,
2652288..2652293,2652300..2652302,2652354..2652356,
2652363..2652371,2652375..2652380,2652531..2652533,
2652627..2652629,2652636..2652641,2652648..2652653))
/gene="hcaT"
/locus_tag="SF2583"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340893"
gene complement(2652858..2653748)
/gene="hcaR"
/locus_tag="SF2584"
/db_xref="GeneID:1025636"
CDS complement(2652858..2653748)
/gene="hcaR"
/locus_tag="SF2584"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator HcaR"
/protein_id="NP_708376.2"
/db_xref="GeneID:1025636"
/translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG
VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEV
NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF
DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNI
VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM
KLALRDFIAIVQERLASVTA"
misc_feature complement(2652861..2653748)
/gene="hcaR"
/locus_tag="SF2584"
/note="DNA-binding transcriptional regulator HcaR;
Provisional; Region: PRK09906"
/db_xref="CDD:182137"
gene 2653884..2655245
/gene="hcaA1"
/locus_tag="SF2585"
/db_xref="GeneID:1026946"
CDS 2653884..2655245
/gene="hcaA1"
/locus_tag="SF2585"
/note="Code: PR; COG: COG2146"
/codon_start=1
/transl_table=11
/product="3-phenylpropionate/cinnamic acid dioxygenase
subunit alpha"
/protein_id="NP_708377.1"
/db_xref="GeneID:1026946"
/translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL
FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNSRA
FTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA
PGLHDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSH
ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV
DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE
VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL
CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE
VMK"
misc_feature 2653935..>2654561
/gene="hcaA1"
/locus_tag="SF2585"
/note="Phenylpropionate dioxygenase or related
ring-hydroxylating dioxygenase, large terminal subunit
[Inorganic ion transport and metabolism, General function
prediction only]; Region: HcaE; COG4638"
/db_xref="CDD:443676"
misc_feature 2654433..2655182
/gene="hcaA1"
/locus_tag="SF2585"
/note="C-terminal catalytic domain of the oxygenase alpha
subunit of naphthalene 1,2-dioxygenase (NDO) and related
aromatic ring hydroxylating dioxygenases; Region:
RHO_alpha_C_NDO-like; cd08881"
/db_xref="CDD:176890"
misc_feature order(2654448..2654471,2654538..2654543,2654946..2654948,
2654955..2654960,2654973..2654975,2654979..2654981,
2654988..2654993,2654997..2655002,2655009..2655011)
/gene="hcaA1"
/locus_tag="SF2585"
/note="beta subunit interface [polypeptide binding]; other
site"
/db_xref="CDD:176890"
misc_feature order(2654496..2654501,2654511..2654513,2654517..2654522,
2654532..2654534,2655000..2655008,2655012..2655017,
2655021..2655044,2655051..2655071,2655135..2655137)
/gene="hcaA1"
/locus_tag="SF2585"
/note="alpha subunit interface [polypeptide binding];
other site"
/db_xref="CDD:176890"
misc_feature order(2654499..2654504,2654511..2654516,2654520..2654525,
2654535..2654537,2654793..2654795,2654799..2654801,
2654829..2654831,2654964..2654966,2654982..2654984,
2654994..2654996)
/gene="hcaA1"
/locus_tag="SF2585"
/note="active site"
/db_xref="CDD:176890"
misc_feature order(2654499..2654504,2654511..2654516,2654520..2654525,
2654535..2654537,2654793..2654795,2654799..2654801,
2654829..2654831,2654964..2654966,2654982..2654984)
/gene="hcaA1"
/locus_tag="SF2585"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176890"
misc_feature order(2654520..2654522,2654535..2654537,2654994..2654996)
/gene="hcaA1"
/locus_tag="SF2585"
/note="Fe binding site [ion binding]; other site"
/db_xref="CDD:176890"
gene 2655242..2655760
/gene="hcaA2"
/locus_tag="SF2586"
/db_xref="GeneID:1025645"
CDS 2655242..2655760
/gene="hcaA2"
/locus_tag="SF2586"
/codon_start=1
/transl_table=11
/product="3-phenylpropionate/cinnamic acid dioxygenase
subunit beta"
/protein_id="NP_708378.1"
/db_xref="GeneID:1025645"
/translation="MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTM
RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNC
QVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ
AVITSHNLSVLF"
misc_feature 2655242..2655757
/gene="hcaA2"
/locus_tag="SF2586"
/note="3-phenylpropionate/cinnamic acid dioxygenase
subunit beta; Region: PRK10069"
/db_xref="CDD:236647"
misc_feature order(2655386..2655391,2655431..2655439,2655443..2655448,
2655470..2655472,2655479..2655481,2655488..2655490,
2655614..2655619,2655722..2655724,2655728..2655730,
2655737..2655748)
/gene="hcaA2"
/locus_tag="SF2586"
/note="inter-subunit interface [active]"
/db_xref="CDD:238357"
gene 2655760..2656080
/gene="hcaC"
/locus_tag="SF2587"
/db_xref="GeneID:1025644"
CDS 2655760..2656080
/gene="hcaC"
/locus_tag="SF2587"
/note="Code: PR; COG: COG2146"
/codon_start=1
/transl_table=11
/product="3-phenylpropionate/cinnamic acid dioxygenase
ferredoxin subunit"
/protein_id="NP_708379.1"
/db_xref="GeneID:1025644"
/translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH
GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLP
EAQP"
misc_feature 2655760..2656077
/gene="hcaC"
/locus_tag="SF2587"
/note="3-phenylpropionate dioxygenase ferredoxin subunit;
Provisional; Region: PRK09965"
/db_xref="CDD:170182"
misc_feature order(2655883..2655885,2655889..2655891,2655943..2655945,
2655952..2655954)
/gene="hcaC"
/locus_tag="SF2587"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:239604"
gene 2656077..2656889
/gene="hcaB"
/locus_tag="SF2588"
/db_xref="GeneID:1026784"
CDS 2656077..2656889
/gene="hcaB"
/locus_tag="SF2588"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="3-phenylpropionate-dihydrodiol/cinnamic
acid-dihydrodiol dehydrogenase"
/protein_id="NP_708380.1"
/db_xref="GeneID:1026784"
/translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA
SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA
ETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTTSK
HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL
PLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL"
misc_feature 2656083..2656853
/gene="hcaB"
/locus_tag="SF2588"
/note="cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
(BphB)-like, classical (c) SDRs; Region: BphB-like_SDR_c;
cd05348"
/db_xref="CDD:187606"
misc_feature order(2656113..2656115,2656119..2656133,2656185..2656190,
2656200..2656202,2656251..2656259,2656335..2656343,
2656434..2656436,2656497..2656505,2656542..2656544,
2656554..2656556,2656629..2656640,2656644..2656652)
/gene="hcaB"
/locus_tag="SF2588"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187606"
misc_feature order(2656422..2656424,2656503..2656505,2656542..2656544,
2656554..2656556)
/gene="hcaB"
/locus_tag="SF2588"
/note="active site"
/db_xref="CDD:187606"
gene 2656899..2658121
/gene="hcaD"
/locus_tag="SF2589"
/pseudo
/db_xref="GeneID:1025632"
misc_feature 2656899..2658121
/gene="hcaD"
/locus_tag="SF2589"
/note="Similar to Escherichia coli K12 ferredoxin
reductase subunit of phenylpropionate dioxygenase gi:
1788892 (401 aa). BLAST with identity of 99% in 408 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 2658146..2658640
/gene="yphA"
/locus_tag="SF2590"
/db_xref="GeneID:1026951"
CDS 2658146..2658640
/gene="yphA"
/locus_tag="SF2590"
/note="Code: S; COG: COG2259"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708381.1"
/db_xref="GeneID:1026951"
/translation="MPGAWRGARVCITFKSHYLAKGLVMNTLRYFDFGAARPVLLLIA
RIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFT
RPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAIS
LDRR"
misc_feature 2658248..2658637
/gene="yphA"
/locus_tag="SF2590"
/note="Uncharacterized membrane protein YphA, DoxX/SURF4
family [Function unknown]; Region: DoxX; COG2259"
/db_xref="CDD:441860"
gene complement(2658688..2659560)
/gene="yphB"
/locus_tag="SF2591"
/db_xref="GeneID:1026948"
CDS complement(2658688..2659560)
/gene="yphB"
/locus_tag="SF2591"
/note="Code: G; COG: COG2017"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708382.1"
/db_xref="GeneID:1026948"
/translation="MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATD
ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLC
LVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ
AQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEG
YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDEHHRPEGCDLIALAPG
ESTTSEMSLRVEWL"
misc_feature complement(2658703..2659530)
/gene="yphB"
/locus_tag="SF2591"
/note="aldose 1-epimerase, similar to Escherichia coli
YphB; Region: Aldose_epim_Ec_YphB; cd09021"
/db_xref="CDD:185698"
misc_feature complement(order(2658802..2658804,2658859..2658861,
2658961..2658963,2659111..2659113,2659117..2659119,
2659312..2659314,2659393..2659395))
/gene="yphB"
/locus_tag="SF2591"
/note="active site"
/db_xref="CDD:185698"
misc_feature complement(order(2658802..2658804,2659117..2659119))
/gene="yphB"
/locus_tag="SF2591"
/note="catalytic residues [active]"
/db_xref="CDD:185698"
gene complement(2659572..2660666)
/gene="yphC"
/locus_tag="SF2592"
/db_xref="GeneID:1025642"
CDS complement(2659572..2660666)
/gene="yphC"
/locus_tag="SF2592"
/note="Code: ER; COG: COG1063"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_708383.1"
/db_xref="GeneID:1025642"
/translation="MKINRIVNEGFMKTMLAAYLLGNSTVDLREVAVPTPGINQVLIK
MKSSGICGSDVHYIYHQHCATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDR
VLVYHISGCGFCPNCRRGFPISCTGKGKAAYGWQRDGGHAEYLLAEEKDLILLPDALS
YEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDM
LPERLAMAKQLGGMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALQSTA
DWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAI
THRFSLEQAGDAYVLMASGKCGKVVINFPD"
misc_feature complement(2659581..2660624)
/gene="yphC"
/locus_tag="SF2592"
/note="L-threonine dehydrogenase (TDH)-like; Region:
THR_DH_like; cd08239"
/db_xref="CDD:176201"
misc_feature complement(order(2659737..2659745,2659812..2659817,
2659875..2659877,2659881..2659886,2659953..2659955,
2660001..2660003,2660013..2660018,2660073..2660090,
2660148..2660150,2660160..2660162,2660499..2660501,
2660508..2660516))
/gene="yphC"
/locus_tag="SF2592"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176201"
misc_feature complement(order(2660160..2660162,2660424..2660426,
2660508..2660510,2660514..2660516))
/gene="yphC"
/locus_tag="SF2592"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176201"
gene complement(2660699..2661697)
/gene="yphD"
/locus_tag="SF2593"
/db_xref="GeneID:1025648"
CDS complement(2660699..2661697)
/gene="yphD"
/locus_tag="SF2593"
/note="Code: G; COG: COG1172"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_708384.1"
/db_xref="GeneID:1025648"
/translation="MYASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA
PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV
PLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPID
ENEVLDWLGGQFLGVPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGIN
VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG
SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR"
misc_feature complement(2660711..2661661)
/gene="yphD"
/locus_tag="SF2593"
/note="Ribose/xylose/arabinose/galactoside ABC-type
transport system, permease component [Carbohydrate
transport and metabolism]; Region: AraH; COG1172"
/db_xref="CDD:440785"
gene complement(2661722..2663233)
/gene="yphE"
/locus_tag="SF2594"
/db_xref="GeneID:1027583"
CDS complement(2661722..2663233)
/gene="yphE"
/locus_tag="SF2594"
/note="Code: G; COG: COG1129"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_708385.1"
/db_xref="GeneID:1027583"
/translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK
NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEG
LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI
ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASY
ATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKP
KLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLETYEQGEIVINGEKIMRPDYGDM
LKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISTNGVLQWSTIRRLTEEVMQRMT
VKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVREL
AAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHSPVNVDELMSAILSVH"
misc_feature complement(2661725..2663182)
/gene="yphE"
/locus_tag="SF2594"
/note="ABC-type sugar transport system, ATPase component
[Carbohydrate transport and metabolism]; Region: MglA;
COG1129"
/db_xref="CDD:440745"
gene complement(2663256..2664238)
/gene="yphF"
/locus_tag="SF2595"
/pseudo
/db_xref="GeneID:1025654"
misc_feature complement(2663256..2664238)
/gene="yphF"
/locus_tag="SF2595"
/note="Similar to Escherichia coli K12 LACI-type
transcriptional regulator gi: 1788898 (328 aa). BLAST with
identity of 97% in 327 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(2664335..2667616)
/locus_tag="SF2596"
/pseudogene="unknown"
/db_xref="GeneID:1027586"
gene 2667734..2668927
/gene="yphH"
/locus_tag="SF2597"
/db_xref="GeneID:1025639"
CDS 2667734..2668927
/gene="yphH"
/locus_tag="SF2597"
/note="Code: K; COG: COG1940"
/codon_start=1
/transl_table=11
/product="NagC-like transcriptional regulator"
/protein_id="NP_708387.2"
/db_xref="GeneID:1025639"
/translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV
SNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL
SPKGEFEYLQIDVPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
MPQAPWTTPVEVKYLLEEKLGIRVLVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG
SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGSLETVASLSALKKQARVWLK
SQPVNTQLEPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL
YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA
QLRQI"
misc_feature 2667974..2668909
/gene="yphH"
/locus_tag="SF2597"
/note="ATPase-like domain of Escherichia coli protein YphH
and similar proteins; Region: ASKHA_ATPase_ROK_YphH-like;
cd24072"
/db_xref="CDD:466922"
gene complement(2669125..2670378)
/gene="glyA"
/locus_tag="SF2598"
/db_xref="GeneID:1025638"
CDS complement(2669125..2670378)
/gene="glyA"
/locus_tag="SF2598"
/note="Code: E; COG: COG0112"
/codon_start=1
/transl_table=11
/product="serine hydroxymethyltransferase"
/protein_id="NP_708388.2"
/db_xref="GeneID:1025638"
/translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
INDEAVIERIKGKVLDICARYPVYA"
misc_feature complement(2669128..2670363)
/gene="glyA"
/locus_tag="SF2598"
/note="serine hydroxymethyltransferase; Reviewed; Region:
glyA; PRK00011"
/db_xref="CDD:234571"
misc_feature complement(order(2669530..2669532,2669584..2669586,
2669962..2669967,2670070..2670072,2670091..2670093,
2670136..2670138,2670160..2670165,2670217..2670219,
2670271..2670273,2670286..2670288,2670313..2670318,
2670337..2670339,2670343..2670345))
/gene="glyA"
/locus_tag="SF2598"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:99733"
misc_feature complement(order(2669290..2669292,2669674..2669676,
2669692..2669697,2669770..2669772,2669779..2669781,
2669854..2669856,2670001..2670003,2670082..2670087,
2670184..2670186,2670214..2670216,2670274..2670276))
/gene="glyA"
/locus_tag="SF2598"
/note="glycine-pyridoxal phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99733"
misc_feature complement(order(2669290..2669292,2669692..2669694,
2670001..2670003,2670274..2670276))
/gene="glyA"
/locus_tag="SF2598"
/note="active site"
/db_xref="CDD:99733"
misc_feature complement(order(2669338..2669340,2669608..2669610,
2669998..2670000,2670004..2670006,2670016..2670018,
2670187..2670189,2670208..2670210))
/gene="glyA"
/locus_tag="SF2598"
/note="folate binding site [chemical binding]; other site"
/db_xref="CDD:99733"
gene 2670705..2671895
/gene="hmpA"
/locus_tag="SF2599"
/db_xref="GeneID:1026953"
CDS 2670705..2671895
/gene="hmpA"
/locus_tag="SF2599"
/note="Code: C; COG: COG1018"
/codon_start=1
/transl_table=11
/product="bifunctional nitric oxide
dioxygenase/dihydropteridine reductase 2"
/protein_id="NP_708389.1"
/db_xref="GeneID:1026953"
/translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISTGVGQTPMLA
MLDTLAKAGHTAQVNWFHAAENGEVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGP
HKVL"
misc_feature 2670705..2671892
/gene="hmpA"
/locus_tag="SF2599"
/note="NO-inducible flavohemoprotein; Region: PRK13289"
/db_xref="CDD:237337"
gene complement(2671940..2672278)
/gene="glnB"
/locus_tag="SF2600"
/db_xref="GeneID:1025665"
CDS complement(2671940..2672278)
/gene="glnB"
/locus_tag="SF2600"
/note="Code: E; COG: COG0347"
/codon_start=1
/transl_table=11
/product="nitrogen regulatory protein P-II 1"
/protein_id="NP_708390.1"
/db_xref="GeneID:1025665"
/translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
RTGEEDDAAI"
misc_feature complement(2671943..2672278)
/gene="glnB"
/locus_tag="SF2600"
/note="Nitrogen regulatory protein PII [Signal
transduction mechanisms, Amino acid transport and
metabolism]; Region: GlnK; COG0347"
/db_xref="CDD:440116"
gene complement(2672339..2673673)
/gene="yfhA"
/locus_tag="SF2601"
/db_xref="GeneID:1025655"
CDS complement(2672339..2673673)
/gene="yfhA"
/locus_tag="SF2601"
/note="Code: T; COG: COG2204"
/codon_start=1
/transl_table=11
/product="response regulator GlrR"
/protein_id="NP_708391.2"
/db_xref="GeneID:1025655"
/translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV
LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT
HRDLSKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
EARNHFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
misc_feature complement(2672342..2673673)
/gene="yfhA"
/locus_tag="SF2601"
/note="response regulator GlrR; Provisional; Region:
PRK15115"
/db_xref="CDD:185070"
gene complement(2673663..2674376)
/gene="yfhG"
/locus_tag="SF2602"
/db_xref="GeneID:1023594"
CDS complement(2673663..2674376)
/gene="yfhG"
/locus_tag="SF2602"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708392.2"
/db_xref="GeneID:1023594"
/translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQ
NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER
QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
PHESEKPAPSTHEVTPDEP"
misc_feature complement(2673666..2674376)
/gene="yfhG"
/locus_tag="SF2602"
/note="two-component system QseEF-associated lipoprotein
QseG; Region: PRK10722"
/db_xref="CDD:236745"
gene complement(2674541..2676031)
/gene="yfhK"
/locus_tag="SF2603"
/db_xref="GeneID:1025662"
CDS complement(2674541..2676031)
/gene="yfhK"
/locus_tag="SF2603"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="2-component sensor protein"
/protein_id="NP_708393.1"
/db_xref="GeneID:1025662"
/translation="MLYLNFPSVSIRLFASDESNTLKRWPVFPRSLRQLVMLAFLLIL
LPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDP
TLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARL
EAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMI
IGPVKNIERMINRLGEGRSLGNSVSFCGPSELRSVGQRILWLSERLSWLESQRHQFLR
HLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSCNLQKLIEQLLDYNR
KQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDN
LYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKG
AVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK"
misc_feature complement(2674562..2675536)
/gene="yfhK"
/locus_tag="SF2603"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:440407"
gene complement(2676526..2680413)
/gene="purL"
/locus_tag="SF2604"
/db_xref="GeneID:1025658"
CDS complement(2676526..2680413)
/gene="purL"
/locus_tag="SF2604"
/note="Code: F; COG: COG0046"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine synthase"
/protein_id="NP_708394.2"
/db_xref="GeneID:1025658"
/translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFDLDDAEQLFAHHQPTPVTS
VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
HKIFNADWIIDGEQQPKSLFRMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE
TGRYNFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
FSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY
EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
ALVREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
SLVISAFARVEDVRHTITPQLCTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
VRDVVQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGIDADIASLGD
DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
APYIATGARPKVAVLREQGVNSHVEMAAAFQRGGFDAIDVHMSDLLTGRTGLEDFHAL
VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
misc_feature complement(2676529..2680410)
/gene="purL"
/locus_tag="SF2604"
/note="phosphoribosylformylglycinamidine synthase;
Provisional; Region: PRK05297"
/db_xref="CDD:235394"
gene 2680810..2682228
/gene="yfhD"
/locus_tag="SF2605"
/db_xref="GeneID:1025640"
CDS 2680810..2682228
/gene="yfhD"
/locus_tag="SF2605"
/codon_start=1
/transl_table=11
/product="membrane-bound lytic transglycosylase F"
/protein_id="NP_708395.2"
/db_xref="GeneID:1025640"
/translation="MSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNI
SQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLT
AEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVA
ISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEK
YLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQAT
SPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFA
LAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAY
AYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSS
SNYLTHSPSLLFSRKGSEEKQN"
misc_feature 2680810..2682120
/gene="yfhD"
/locus_tag="SF2605"
/note="membrane-bound lytic murein transglycosylase MltF;
Region: PRK10859"
/db_xref="CDD:236778"
gene complement(2682225..2682761)
/gene="yfhC"
/locus_tag="SF2606"
/db_xref="GeneID:1026570"
CDS complement(2682225..2682761)
/gene="yfhC"
/locus_tag="SF2606"
/note="Code: FJ; COG: COG0590"
/codon_start=1
/transl_table=11
/product="tRNA-specific adenosine deaminase"
/protein_id="NP_708396.1"
/db_xref="GeneID:1026570"
/translation="MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAV
LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
GAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
RMRRQEIKAQKKAQSSTD"
misc_feature complement(2682228..2682743)
/gene="yfhC"
/locus_tag="SF2606"
/note="tRNA-specific adenosine deaminase; Provisional;
Region: PRK10860"
/db_xref="CDD:182786"
misc_feature complement(order(2682459..2682461,2682468..2682470,
2682552..2682560,2682591..2682593,2682639..2682641))
/gene="yfhC"
/locus_tag="SF2606"
/note="nucleoside/Zn binding site [active]"
/db_xref="CDD:238612"
misc_feature complement(order(2682438..2682443,2682450..2682455,
2682462..2682467,2682537..2682539,2682549..2682551,
2682564..2682566))
/gene="yfhC"
/locus_tag="SF2606"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238612"
misc_feature complement(order(2682459..2682461,2682468..2682473,
2682552..2682560))
/gene="yfhC"
/locus_tag="SF2606"
/note="catalytic motif [active]"
/db_xref="CDD:238612"
gene complement(2682786..2683358)
/gene="yfhB"
/locus_tag="SF2607"
/db_xref="GeneID:1025660"
CDS complement(2682786..2683358)
/gene="yfhB"
/locus_tag="SF2607"
/note="Code: E; COG: COG0560"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708397.4"
/db_xref="GeneID:1025660"
/translation="MFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSL
LLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQ
PLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSG
YSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
misc_feature complement(2682789..2683358)
/gene="yfhB"
/locus_tag="SF2607"
/note="The haloacid dehalogenase (HAD) superfamily
includes carbon and phosphorus hydrolases such as
2-haloalkonoate dehalogenase, epoxide hydrolase,
phosphoserine phosphatase, phosphomannomutase,
phosphoglycolate phosphatase, P-type ATPase, among others.
These...; Region: Haloacid Dehalogenase-like Hydrolases;
cl21460"
/db_xref="CDD:473868"
gene 2683558..2684478
/gene="yfhH"
/locus_tag="SF2608"
/db_xref="GeneID:1025651"
CDS 2683558..2684478
/gene="yfhH"
/locus_tag="SF2608"
/note="Code: K; COG: COG1737"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708398.3"
/db_xref="GeneID:1025651"
/translation="MEYKIHSRVSHIACCRHYFIARKDMNGLLRIRQRYQGLAQSDKK
LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQP
ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRII
LTGIGASGLVAQNFAWKLMKIGFNAAALRDMHALLATVQASSPDDLLLAISYTGVRRE
LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT
DLLFIALIQQDLELAPERIRHSEALVKKLV"
misc_feature 2683642..2684475
/gene="yfhH"
/locus_tag="SF2608"
/note="MurR/RpiR family transcriptional regulator; Region:
PRK11557"
/db_xref="CDD:183195"
gene complement(2684931..2685371)
/locus_tag="SF2609"
/db_xref="GeneID:1025657"
CDS complement(2684931..2685371)
/locus_tag="SF2609"
/note="Code: L; COG: COG1961"
/codon_start=1
/transl_table=11
/product="DNA-invertase"
/protein_id="NP_708399.2"
/db_xref="GeneID:1025657"
/translation="MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPG
LKKLLKTLSAGDTLVVWKLDRLGRSMRHLVVLVEALRERGINFRSLTDSIDTSTPMGR
FFFHVMGALAEMERELIVERTKAGLEAARAQGRIGGRRPKLSPE"
misc_feature complement(2684994..2685368)
/locus_tag="SF2609"
/note="Serine Recombinase (SR) family, Resolvase and
Invertase subfamily, catalytic domain; members contain a
C-terminal DNA binding domain. Serine recombinases
catalyze site-specific recombination of DNA molecules by a
concerted, four-strand cleavage and...; Region: SR_ResInv;
cd03768"
/db_xref="CDD:239737"
misc_feature complement(order(2685168..2685170,2685177..2685182,
2685345..2685347,2685351..2685353))
/locus_tag="SF2609"
/note="catalytic residues [active]"
/db_xref="CDD:239737"
misc_feature complement(2685345..2685347)
/locus_tag="SF2609"
/note="catalytic nucleophile [active]"
/db_xref="CDD:239737"
misc_feature complement(order(2685027..2685029,2685039..2685044,
2685048..2685053,2685183..2685185))
/locus_tag="SF2609"
/note="Presynaptic Site I dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(order(2685021..2685023,2685030..2685032,
2685039..2685044,2685051..2685056,2685063..2685065,
2685147..2685152,2685165..2685167))
/locus_tag="SF2609"
/note="Synaptic Antiparallel dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(order(2685006..2685008,2685018..2685020,
2685027..2685029,2685039..2685041,2685048..2685053,
2685060..2685065,2685090..2685098))
/locus_tag="SF2609"
/note="Synaptic Flat tetramer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(order(2685006..2685008,2685018..2685020,
2685027..2685029,2685039..2685041,2685048..2685050,
2685096..2685098))
/locus_tag="SF2609"
/note="Synaptic Site I dimer interface [polypeptide
binding]; other site"
/db_xref="CDD:239737"
misc_feature complement(order(2685003..2685008,2685024..2685026))
/locus_tag="SF2609"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:239737"
misc_feature 2685386..2696907
/note="ipaH island V"
gene 2685872..2687698
/gene="ipaH_7"
/locus_tag="SF2610"
/db_xref="GeneID:1025652"
CDS 2685872..2687698
/gene="ipaH_7"
/locus_tag="SF2610"
/codon_start=1
/transl_table=11
/product="invasion plasmid antigen"
/protein_id="NP_708400.2"
/db_xref="GeneID:1025652"
/translation="MREINMLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQR
TEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKEL
IARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLK
KLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQEN
IIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQ
FRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVS
TQWTSFSTEENSRAFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAV
AADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIAR
DKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSR
EENEFTDWFSLWGPWHAVLKRTEADRWALAEEQKYEMLENEYPQRVADRLKASGLSGD
ADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS"
misc_feature 2685881..2686018
/gene="ipaH_7"
/locus_tag="SF2610"
/note="Type III secretion system leucine rich repeat
protein; Region: TTSSLRR; pfam12468"
/db_xref="CDD:432576"
misc_feature 2685962..2687653
/gene="ipaH_7"
/locus_tag="SF2610"
/note="type III secretion system effector E3 ubiquitin
transferase SlrP; Region: PRK15370"
/db_xref="CDD:185268"
misc_feature 2686106..2686165
/gene="ipaH_7"
/locus_tag="SF2610"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 2686226..2686285
/gene="ipaH_7"
/locus_tag="SF2610"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 2686286..2686345
/gene="ipaH_7"
/locus_tag="SF2610"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 2686346..2686405
/gene="ipaH_7"
/locus_tag="SF2610"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 2686514..2686606
/gene="ipaH_7"
/locus_tag="SF2610"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
gene complement(2687878..2688501)
/locus_tag="SF2611"
/db_xref="GeneID:1026930"
CDS complement(2687878..2688501)
/locus_tag="SF2611"
/codon_start=1
/transl_table=11
/product="prophage CP-933K tail protein"
/protein_id="NP_708401.1"
/db_xref="GeneID:1026930"
/translation="MHMSLAQCPGFLFAHREECTVEIKKIINPRYTESGAVDCDVFFD
DRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAW
RTEQEAKPFTFEWNGRTWNADASSVARLSPVVMLAKSVAAQTHMVWSDADNQQVKLSM
PELEELAAAMVQAQVDRNDEIYRRQREMKEELSSLDDLASIRAFDVK"
misc_feature complement(2687893..2688216)
/locus_tag="SF2611"
/note="Domain of unknown function (DUF4376); Region:
DUF4376; pfam14301"
/db_xref="CDD:433852"
gene complement(2688580..2689716)
/locus_tag="SF2612"
/pseudogene="unknown"
/db_xref="GeneID:1026944"
gene complement(2689740..2690228)
/locus_tag="SF2613"
/db_xref="GeneID:1025659"
CDS complement(2689740..2690228)
/locus_tag="SF2613"
/codon_start=1
/transl_table=11
/product="tail fiber assembly protein"
/protein_id="NP_708403.1"
/db_xref="GeneID:1025659"
/translation="MTKRYSVTWLFSEDGKNWYEELKNFASDTIKIAYTGDGRVVWVG
KDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVS
ARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKSSYNAIEWPASPEG
SS"
misc_feature complement(2689752..2690171)
/locus_tag="SF2613"
/note="Caudovirales tail fibre assembly protein, lambda
gpK; Region: Caudo_TAP; pfam02413"
/db_xref="CDD:426761"
gene complement(2690288..2690806)
/locus_tag="SF2614"
/db_xref="GeneID:1026931"
CDS complement(2690288..2690806)
/locus_tag="SF2614"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_708404.1"
/db_xref="GeneID:1026931"
/translation="MSGDSGGQSIRFQNGVAIAFKNIQAGTARKFTLSSANNSTKNAA
FYLWGNPSRPVVAELGDDSGWHFFSQRNPDNSIVFTVNGQVIPLNYGNFDARYKYRTE
GVQDVRYGHEMYYSPGSNTVSWRFCAPSGHGLSGMAISDTGRNSADNVDGVYYRPLQK
LINGTWYNVASI"
mobile_element 2690779..2692109
/mobile_element_type="insertion sequence:IS2"
gene 2690825..2691235
/locus_tag="SF2615"
/db_xref="GeneID:1026934"
CDS 2690825..2691235
/locus_tag="SF2615"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_708405.3"
/db_xref="GeneID:1026934"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 2690870..2691232
/locus_tag="SF2615"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 2691193..2692098
/locus_tag="SF2616"
/db_xref="GeneID:1026938"
CDS 2691193..2692098
/locus_tag="SF2616"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_708406.1"
/db_xref="GeneID:1026938"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature 2691193..2692095
/locus_tag="SF2616"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(2691932..2693011)
/locus_tag="SF2617"
/db_xref="GeneID:1026955"
CDS complement(2691932..2693011)
/locus_tag="SF2617"
/codon_start=1
/transl_table=11
/product="tail fiber protein"
/protein_id="NP_708407.1"
/db_xref="GeneID:1026955"
/translation="MKASDKPRQLAVPFASTGDKNRIPDKATQQTRESGNAAYDSGFP
PVTMTAVSAGGIPPHGKDFNGLMYDITAAIRFAQAGGLYTYNAGFAGAIGGYAKGAIL
AGVATTAVWLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTARDN
LQVYSKEQSDQRYVHREGDKITGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSE
GQGENGDIGPLRPFTINLRTGEISMSHKVSVGGGSQVNGALGIGVQNALGGNSIVLGD
NDTGFKQNGDGILDVYANSQRVFRCGFAPIFPDICYHLTHYKPAAADIPVASDNPAHY
ADAIRYNARTPLQGSLLPLTRLVWA"
gene complement(2692998..2693603)
/locus_tag="SF2618"
/db_xref="GeneID:1026932"
CDS complement(2692998..2693603)
/locus_tag="SF2618"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_708408.1"
/db_xref="GeneID:1026932"
/translation="MQNVAATVLAQYAASPRLNALINSFNAALSPDSFISDFYGLIWN
IDTAEKYGLDVWGKIVGVSRWLTVKDDFNYLGFSESRMDTPVMDDPCPFNQAPFYNGK
SDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINLMLRFMFGKKRRAYVLNNGGLRMS
YVFESALSLAELAIIQSSGALPSPPGVYVSVVLKESRNEGQ"
misc_feature complement(2693031..2693594)
/locus_tag="SF2618"
/note="Protein of unknown function (DUF2612); Region:
DUF2612; pfam11041"
/db_xref="CDD:431622"
gene complement(2693605..2694072)
/locus_tag="SF2619"
/db_xref="GeneID:1026936"
CDS complement(2693605..2694072)
/locus_tag="SF2619"
/codon_start=1
/transl_table=11
/product="bacteriophage protein"
/protein_id="NP_708409.1"
/db_xref="GeneID:1026936"
/translation="MYGGSPADIAAAIWRKAPPGIDMNGNTTFTVADKEYDPPYPEYV
ISWQTLKPVSLHVSVTLKKSDYLPSDITRQVQQSVLDAFNGTDGGLRARVASVVSAGR
YYAGIYKTDPEHIDILGLTVSRDGSSWTTAVTFGIDEIPVLDVSDISVKLQEA"
misc_feature complement(2693623..>2694072)
/locus_tag="SF2619"
/note="Uncharacterized phage protein gp47/JayE [Mobilome:
prophages, transposons]; Region: JayE; COG3299"
/db_xref="CDD:442528"
mobile_element 2694303..2695566
/mobile_element_type="insertion sequence:IS600"
gene 2694367..2694669
/locus_tag="SF2620"
/db_xref="GeneID:1025668"
CDS 2694367..2694669
/locus_tag="SF2620"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_708410.1"
/db_xref="GeneID:1025668"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 2694367..2694639
/locus_tag="SF2620"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2694810..2695523
/locus_tag="SF2621"
/db_xref="GeneID:1026933"
CDS 2694810..2695523
/locus_tag="SF2621"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 integrase core
domain-containing protein"
/protein_id="NP_708411.1"
/db_xref="GeneID:1026933"
/translation="MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQ
KRKFRATTNPNHNLPVAPNLLNHTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYT
CEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHS
RLGNISPAAFREKHHQMAA"
misc_feature <2694810..2695496
/locus_tag="SF2621"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2695564..2696663)
/locus_tag="SF2622"
/pseudogene="unknown"
/db_xref="GeneID:1025649"
gene 2696878..2697138
/gene="yfhL"
/locus_tag="SF2624"
/db_xref="GeneID:1025650"
CDS 2696878..2697138
/gene="yfhL"
/locus_tag="SF2624"
/note="Code: C; COG: COG1145"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708414.1"
/db_xref="GeneID:1025650"
/translation="MSLLITKRCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
misc_feature 2696878..2697117
/gene="yfhL"
/locus_tag="SF2624"
/note="YfhL family 4Fe-4S dicluster ferredoxin; Region:
di_4Fe-4S_YfhL; NF033683"
/db_xref="CDD:468141"
gene complement(2697832..2698212)
/gene="acpS"
/locus_tag="SF2625"
/db_xref="GeneID:1026788"
CDS complement(2697832..2698212)
/gene="acpS"
/locus_tag="SF2625"
/note="Code: I; COG: COG0736"
/codon_start=1
/transl_table=11
/product="4'-phosphopantetheinyl transferase"
/protein_id="NP_708415.1"
/db_xref="GeneID:1026788"
/translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
GVVNMHVTLADERHYACATVIIES"
misc_feature complement(2697835..2698209)
/gene="acpS"
/locus_tag="SF2625"
/note="4'-phosphopantetheinyl transferase; Provisional;
Region: acpS; PRK00070"
/db_xref="CDD:234610"
gene complement(2698212..2698943)
/gene="pdxJ"
/locus_tag="SF2626"
/db_xref="GeneID:1026563"
CDS complement(2698212..2698943)
/gene="pdxJ"
/locus_tag="SF2626"
/note="Code: H; COG: COG0854"
/codon_start=1
/transl_table=11
/product="pyridoxine 5'-phosphate synthase"
/protein_id="NP_708416.2"
/db_xref="GeneID:1026563"
/translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
TEGGLDVAGQREKIRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
DAKTDAEQAQELVRIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
IGRAVMTGLKDAVAEMKRLMLEARG"
misc_feature complement(2698221..2698934)
/gene="pdxJ"
/locus_tag="SF2626"
/note="pyridoxine 5'-phosphate synthase; Provisional;
Region: PRK05265"
/db_xref="CDD:235380"
misc_feature complement(order(2698296..2698301,2698362..2698367,
2698485..2698487,2698545..2698547,2698626..2698628,
2698635..2698640,2698728..2698730,2698788..2698793,
2698803..2698805,2698809..2698811,2698884..2698886,
2698908..2698913,2698917..2698919))
/gene="pdxJ"
/locus_tag="SF2626"
/note="active site"
/db_xref="CDD:237977"
misc_feature complement(order(2698305..2698307,2698311..2698316,
2698365..2698367,2698374..2698376,2698485..2698487,
2698491..2698493,2698545..2698547,2698551..2698553,
2698668..2698670,2698674..2698676,2698728..2698730,
2698734..2698736,2698740..2698742,2698815..2698817,
2698917..2698919))
/gene="pdxJ"
/locus_tag="SF2626"
/note="hydrophilic channel [active]"
/db_xref="CDD:237977"
misc_feature complement(order(2698461..2698466,2698884..2698886))
/gene="pdxJ"
/locus_tag="SF2626"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:237977"
misc_feature complement(order(2698365..2698367,2698485..2698487,
2698728..2698730,2698809..2698811))
/gene="pdxJ"
/locus_tag="SF2626"
/note="catalytic residues [active]"
/db_xref="CDD:237977"
misc_feature complement(2698626..2698658)
/gene="pdxJ"
/locus_tag="SF2626"
/note="active site lid [active]"
/db_xref="CDD:237977"
gene complement(2698955..2699683)
/gene="recO"
/locus_tag="SF2627"
/db_xref="GeneID:1025671"
CDS complement(2698955..2699683)
/gene="recO"
/locus_tag="SF2627"
/note="Code: L; COG: COG1381"
/codon_start=1
/transl_table=11
/product="DNA repair protein RecO"
/protein_id="NP_708417.1"
/db_xref="GeneID:1025671"
/translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
ETRFSELFFDYLHCIQSLAGDTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDG
TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
GKPLKSRELFRQFMPKRTVKTHYE"
misc_feature complement(2698991..2699683)
/gene="recO"
/locus_tag="SF2627"
/note="Recombinational DNA repair protein RecO (RecF
pathway) [Replication, recombination and repair]; Region:
RecO; COG1381"
/db_xref="CDD:440991"
gene complement(2699695..2700600)
/gene="era"
/locus_tag="SF2628"
/db_xref="GeneID:1025663"
CDS complement(2699695..2700600)
/gene="era"
/locus_tag="SF2628"
/note="Code: R; COG: COG1159"
/codon_start=1
/transl_table=11
/product="GTPase Era"
/protein_id="NP_708418.1"
/db_xref="GeneID:1025663"
/translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
PDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
ERFVSNERGGCDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
LWVKVKSGWADDERALRSLGYVDDL"
misc_feature complement(2699710..2700591)
/gene="era"
/locus_tag="SF2628"
/note="GTPase Era; Reviewed; Region: era; PRK00089"
/db_xref="CDD:234624"
gene complement(2700597..2701277)
/gene="rnc"
/locus_tag="SF2629"
/db_xref="GeneID:1023569"
CDS complement(2700597..2701277)
/gene="rnc"
/locus_tag="SF2629"
/note="Code: K; COG: COG0571"
/codon_start=1
/transl_table=11
/product="ribonuclease III"
/protein_id="NP_708419.1"
/db_xref="GeneID:1023569"
/translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
ALKKLELE"
misc_feature complement(2700648..2701262)
/gene="rnc"
/locus_tag="SF2629"
/note="dsRNA-specific ribonuclease [Transcription];
Region: Rnc; COG0571"
/db_xref="CDD:440336"
gene complement(2701549..2702523)
/gene="lepB"
/locus_tag="SF2630"
/db_xref="GeneID:1026728"
CDS complement(2701549..2702523)
/gene="lepB"
/locus_tag="SF2630"
/note="Code: N; COG: COG0681"
/codon_start=1
/transl_table=11
/product="signal peptidase I"
/protein_id="NP_708420.1"
/db_xref="GeneID:1026728"
/translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD
SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
misc_feature complement(2701552..2702523)
/gene="lepB"
/locus_tag="SF2630"
/note="signal peptidase I; Region: PRK10861"
/db_xref="CDD:182787"
gene complement(2702539..2704338)
/gene="lepA"
/locus_tag="SF2631"
/db_xref="GeneID:1026783"
CDS complement(2702539..2704338)
/gene="lepA"
/locus_tag="SF2631"
/note="Code: N; COG: COG0481"
/codon_start=1
/transl_table=11
/product="GTP-binding protein LepA"
/protein_id="NP_708421.1"
/db_xref="GeneID:1026783"
/translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
misc_feature complement(2702554..2704338)
/gene="lepA"
/locus_tag="SF2631"
/note="Translation elongation factor EF-4, membrane-bound
GTPase [Translation, ribosomal structure and biogenesis];
Region: LepA; COG0481"
/db_xref="CDD:440249"
gene complement(2704536..2705015)
/gene="rseC"
/locus_tag="SF2632"
/db_xref="GeneID:1025653"
CDS complement(2704536..2705015)
/gene="rseC"
/locus_tag="SF2632"
/note="Code: T; COG: COG3086"
/codon_start=1
/transl_table=11
/product="SoxR reducing system protein RseC"
/protein_id="NP_708422.1"
/db_xref="GeneID:1025653"
/translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
DVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
misc_feature complement(2704554..2705015)
/gene="rseC"
/locus_tag="SF2632"
/note="SoxR-reducing system protein RseC; Region:
PRK10862"
/db_xref="CDD:182788"
gene complement(2705012..2705968)
/gene="rseB"
/locus_tag="SF2633"
/db_xref="GeneID:1027220"
CDS complement(2705012..2705968)
/gene="rseB"
/locus_tag="SF2633"
/note="Code: T; COG: COG3026"
/codon_start=1
/transl_table=11
/product="anti-sigma E factor"
/protein_id="NP_708423.1"
/db_xref="GeneID:1027220"
/translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTL
NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
misc_feature complement(2705015..2705968)
/gene="rseB"
/locus_tag="SF2633"
/note="anti-sigma E factor; Provisional; Region: rseB;
PRK09455"
/db_xref="CDD:236525"
misc_feature complement(order(2705426..2705428,2705621..2705623,
2705663..2705665,2705669..2705671,2705687..2705689,
2705693..2705695,2705720..2705722,2705726..2705728,
2705738..2705740,2705750..2705752,2705795..2705797,
2705801..2705815,2705822..2705824,2705852..2705854,
2705864..2705866))
/gene="rseB"
/locus_tag="SF2633"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:319985"
misc_feature complement(order(2705405..2705407,2705414..2705416,
2705420..2705422,2705426..2705428,2705453..2705455,
2705459..2705461,2705468..2705470,2705495..2705497,
2705501..2705503,2705531..2705533,2705687..2705689,
2705693..2705695,2705720..2705722,2705726..2705728,
2705744..2705746,2705750..2705752,2705789..2705791,
2705795..2705797,2705801..2705803,2705816..2705818,
2705822..2705824,2705828..2705830,2705834..2705836))
/gene="rseB"
/locus_tag="SF2633"
/note="hydrophobic core; other site"
/db_xref="CDD:319985"
misc_feature complement(order(2705663..2705665,2705678..2705680,
2705687..2705689,2705693..2705695,2705720..2705722,
2705726..2705728,2705744..2705746,2705810..2705812,
2705816..2705818))
/gene="rseB"
/locus_tag="SF2633"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:319985"
gene complement(2705968..2706618)
/gene="rseA"
/locus_tag="SF2634"
/db_xref="GeneID:1026949"
CDS complement(2705968..2706618)
/gene="rseA"
/locus_tag="SF2634"
/note="Code: T; COG: COG3073"
/codon_start=1
/transl_table=11
/product="anti-RNA polymerase sigma factor SigE"
/protein_id="NP_708424.2"
/db_xref="GeneID:1026949"
/translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
GDTPEVLHFDISSRVMAAIEEEPVRQSATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
misc_feature complement(2705971..2706618)
/gene="rseA"
/locus_tag="SF2634"
/note="anti-sigma-E factor RseA; Region: PRK10863"
/db_xref="CDD:182789"
misc_feature complement(order(2706430..2706435,2706439..2706447,
2706451..2706459,2706487..2706522,2706526..2706528,
2706556..2706561,2706580..2706600,2706607..2706612))
/gene="rseA"
/locus_tag="SF2634"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:319992"
gene complement(2706651..2707226)
/gene="rpoE"
/locus_tag="SF2635"
/db_xref="GeneID:1026945"
CDS complement(2706651..2707226)
/gene="rpoE"
/locus_tag="SF2635"
/note="Code: K; COG: COG1595"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor RpoE"
/protein_id="NP_708425.2"
/db_xref="GeneID:1026945"
/translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
misc_feature complement(2706660..2707226)
/gene="rpoE"
/locus_tag="SF2635"
/note="RNA polymerase sigma factor RpoE; Region:
RpoE_Sigma70; TIGR02939"
/db_xref="CDD:131985"
gene 2707634..2709256
/gene="nadB"
/locus_tag="SF2636"
/pseudo
/db_xref="GeneID:1025673"
misc_feature 2707634..2709256
/gene="nadB"
/locus_tag="SF2636"
/note="'Similar to Escherichia coli K12 quinolinate
synthetase, B protein gi: 1788928 (541 aa). BLAST with
identity of 97% in 541 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct.'"
/pseudo
gene complement(2709241..2710098)
/gene="yfiC"
/locus_tag="SF2637"
/db_xref="GeneID:1025677"
CDS complement(2709241..2710098)
/gene="yfiC"
/locus_tag="SF2637"
/note="Code: QR; COG: COG0500"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708426.1"
/db_xref="GeneID:1025677"
/translation="MWGADYRRYGCNLHLFVWISLLGYCSHPVLSPFFLQGFIFMSQS
TSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALML
AQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLII
SNPPYYQQGVECATPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFT
ELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTA
LTQAFYLFM"
misc_feature complement(2709256..2709954)
/gene="yfiC"
/locus_tag="SF2637"
/note="tRNA1(Val) A37 N6-methylase TrmN6 [Translation,
ribosomal structure and biogenesis]; Region: TrmN6;
COG4123"
/db_xref="CDD:443299"
gene 2710110..2711444
/gene="srmB"
/locus_tag="SF2638"
/db_xref="GeneID:1025667"
CDS 2710110..2711444
/gene="srmB"
/locus_tag="SF2638"
/note="Code: LKJ; COG: COG0513"
/codon_start=1
/transl_table=11
/product="ATP-dependent RNA helicase SrmB"
/protein_id="NP_708427.1"
/db_xref="GeneID:1025667"
/translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC
YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTG
KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
misc_feature 2710161..2711414
/gene="srmB"
/locus_tag="SF2638"
/note="ATP-dependent RNA helicase SrmB; Provisional;
Region: PRK11192"
/db_xref="CDD:236877"
misc_feature order(2710176..2710181,2710185..2710193,2710200..2710202,
2710254..2710277)
/gene="srmB"
/locus_tag="SF2638"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350669"
gene complement(2711479..2712405)
/gene="yfiE"
/locus_tag="SF2639"
/db_xref="GeneID:1026790"
CDS complement(2711479..2712405)
/gene="yfiE"
/locus_tag="SF2639"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_708428.1"
/db_xref="GeneID:1026790"
/translation="MFLYSKFDIFDRFGVMDLRRFITLKTVVEEGSFLRASQKLCCTQ
STVTFHIQQLEQEFSVQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKESD
PDGELRVVSGETLLSYRMPQVLQRFRQRAPKVRLSLQALNCYVIRDALLNDEADVGVF
YRVGNDDALNRRELGEQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFES
TLRQRRITVENTIELISIESIKRCVAANIGVSYLPHFAVEKEIESGELIELPFGEQSQ
TITAMCAHYAGKAVSPAMHIFIQCVEECFVVA"
misc_feature complement(2711491..2712360)
/gene="yfiE"
/locus_tag="SF2639"
/note="DNA-binding transcriptional regulator, LysR family
[Transcription]; Region: LysR; COG0583"
/db_xref="CDD:440348"
gene 2712463..2713050
/gene="yfiK"
/locus_tag="SF2640"
/db_xref="GeneID:1025669"
CDS 2712463..2713050
/gene="yfiK"
/locus_tag="SF2640"
/note="Code: E; COG: COG1280"
/codon_start=1
/transl_table=11
/product="cysteine/O-acetylserine exporter"
/protein_id="NP_708429.1"
/db_xref="GeneID:1025669"
/translation="MTPILLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLA
GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
misc_feature 2712463..2713047
/gene="yfiK"
/locus_tag="SF2640"
/note="cysteine/O-acetylserine transporter; Region:
PRK10323"
/db_xref="CDD:182377"
gene complement(2713106..2713489)
/gene="yfiD"
/locus_tag="SF2641"
/db_xref="GeneID:1026902"
CDS complement(2713106..2713489)
/gene="yfiD"
/locus_tag="SF2641"
/note="Code: R; COG: COG3445"
/codon_start=1
/transl_table=11
/product="autonomous glycyl radical cofactor GrcA"
/protein_id="NP_708430.2"
/db_xref="GeneID:1026902"
/translation="MITGIQITKAANADLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
YAVRFNSLTPEQQRDVIARTFTESL"
misc_feature complement(2713109..2713489)
/gene="yfiD"
/locus_tag="SF2641"
/note="autonomous glycyl radical cofactor GrcA;
Provisional; Region: PRK11127"
/db_xref="CDD:182983"
gene 2713794..2714483
/locus_tag="SF2642"
/pseudogene="unknown"
/db_xref="GeneID:1027568"
gene complement(2714531..2715568)
/gene="yfiF"
/locus_tag="SF2643"
/db_xref="GeneID:1026792"
CDS complement(2714531..2715568)
/gene="yfiF"
/locus_tag="SF2643"
/note="Code: J; COG: COG0566"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="NP_708432.2"
/db_xref="GeneID:1026792"
/translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPAKSRA
DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
ELTKASGTEHHGGVCFLIKKRNGTTVQQWVIQAGAQDCVLALENESNPHNLGGMMRSC
AHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGHNIVNVLHDFRQAGYSVVNTS
SEQGTPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV
LLGEWWRQNKA"
misc_feature complement(2714534..2715568)
/gene="yfiF"
/locus_tag="SF2643"
/note="putative methyltransferase; Provisional; Region:
PRK10864"
/db_xref="CDD:236779"
gene 2715775..2716194
/gene="trxC"
/locus_tag="SF2644"
/db_xref="GeneID:1026952"
CDS 2715775..2716194
/gene="trxC"
/locus_tag="SF2644"
/note="Code: OC; COG: COG0526"
/codon_start=1
/transl_table=11
/product="thioredoxin"
/protein_id="NP_708433.1"
/db_xref="GeneID:1026952"
/translation="MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
misc_feature 2715775..2716191
/gene="trxC"
/locus_tag="SF2644"
/note="thioredoxin 2; Provisional; Region: PRK10996"
/db_xref="CDD:182889"
gene 2716239..2716961
/gene="yfiP"
/locus_tag="SF2645"
/db_xref="GeneID:1026929"
CDS 2716239..2716961
/gene="yfiP"
/locus_tag="SF2645"
/note="Code: S; COG: COG3148"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708434.2"
/db_xref="GeneID:1026929"
/translation="MAFFRRSLMTENAVLQLRAERIARATRPFLARGNRVRRCQRCLL
PEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQD
LLDLVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPY
LDNLPVISVDLSRLSAYRLREAQAAGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFK
TRYLAGKTQHLGSITAEQLESV"
misc_feature 2716329..2716922
/gene="yfiP"
/locus_tag="SF2645"
/note="tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/
YfiP, DTW domain [Translation, ribosomal structure and
biogenesis]; Region: TapT; COG3148"
/db_xref="CDD:442382"
gene 2716993..2719653
/gene="yfiQ"
/locus_tag="SF2646"
/db_xref="GeneID:1027489"
CDS 2716993..2719653
/gene="yfiQ"
/locus_tag="SF2646"
/note="Code: C; COG: COG1042"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708435.1"
/db_xref="GeneID:1027489"
/translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV
LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
NTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
VETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHV
AVSNPLDLRDDASSEHYVKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH
HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
RVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN
LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR
AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRNHGLQRLNGITMPNNRGMVA
LARKLGFNVDIQLEEGIVGLTLNLARREES"
misc_feature 2716993..2719092
/gene="yfiQ"
/locus_tag="SF2646"
/note="Acyl-CoA synthetase (NDP forming) [Energy
production and conversion]; Region: PatZN; COG1042"
/db_xref="CDD:440664"
misc_feature 2719156..2719581
/gene="yfiQ"
/locus_tag="SF2646"
/note="Protein N-acetyltransferase, RimJ/RimL family
[Translation, ribosomal structure and biogenesis,
Posttranslational modification, protein turnover,
chaperones]; Region: RimL; COG1670"
/db_xref="CDD:441276"
gene 2719767..2721122
/gene="pssA"
/locus_tag="SF2647"
/db_xref="GeneID:1026941"
CDS 2719767..2721122
/gene="pssA"
/locus_tag="SF2647"
/note="Code: I; COG: COG1502"
/codon_start=1
/transl_table=11
/product="phosphatidylserine synthase"
/protein_id="NP_708436.2"
/db_xref="GeneID:1026941"
/translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
ASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAAS
NTNADWYCRMAQENPGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSR
LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
PQLELAPQREKELELIRERTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
L"
misc_feature 2719767..2721059
/gene="pssA"
/locus_tag="SF2647"
/note="CDP-diacylglycerol--serine
O-phosphatidyltransferase; Region: pssA; PRK09428"
/db_xref="CDD:236510"
gene 2721147..2721491
/gene="yfiM"
/locus_tag="SF2648"
/db_xref="GeneID:1025666"
CDS 2721147..2721491
/gene="yfiM"
/locus_tag="SF2648"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_708437.3"
/db_xref="GeneID:1025666"
/translation="MFFGGHVLRILFVCSLLLLSECSHMDNDSWSGQDKAQHFIASAI
LSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGA
STGYTVWQLTRH"
misc_feature 2721168..2721485
/gene="yfiM"
/locus_tag="SF2648"
/note="YfiM family lipoprotein; Region: PRK10759"
/db_xref="CDD:182705"
gene complement(2721488..2722786)
/gene="kgtP"
/locus_tag="SF2649"
/db_xref="GeneID:1026888"
CDS complement(2721488..2722786)
/gene="kgtP"
/locus_tag="SF2649"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="alpha-ketoglutarate transporter"
/protein_id="NP_708438.2"
/db_xref="GeneID:1026888"
/translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS
SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV
ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL"
misc_feature complement(2721491..2722786)
/gene="kgtP"
/locus_tag="SF2649"
/note="alpha-ketoglutarate transporter; Provisional;
Region: PRK10406"
/db_xref="CDD:182433"
gene complement(2723110..2723228)
/gene="rrfG"
/locus_tag="SF4493"
/db_xref="GeneID:1026859"
rRNA complement(2723110..2723228)
/gene="rrfG"
/locus_tag="SF4493"
/product="5S ribosomal RNA"
/db_xref="GeneID:1026859"
gene complement(2723323..2726226)
/gene="rrlG"
/locus_tag="SF4494"
/db_xref="GeneID:1025661"
rRNA complement(2723323..2726226)
/gene="rrlG"
/locus_tag="SF4494"
/product="23S ribosomal RNA"
/db_xref="GeneID:1025661"
gene complement(2726410..2726485)
/locus_tag="SF4495"
/db_xref="GeneID:3161856"
tRNA complement(2726410..2726485)
/locus_tag="SF4495"
/product="tRNA-Ala"
/codon_recognized="GCA"
/db_xref="GeneID:3161856"
gene complement(2726528..2726604)
/locus_tag="SF4496"
/db_xref="GeneID:3161855"
tRNA complement(2726528..2726604)
/locus_tag="SF4496"
/product="tRNA-Ile"
/codon_recognized="AUC"
/db_xref="GeneID:3161855"
gene complement(2726673..2728213)
/gene="rrsG"
/locus_tag="SF4497"
/db_xref="GeneID:1026935"
rRNA complement(2726673..2728213)
/gene="rrsG"
/locus_tag="SF4497"
/product="16S ribosomal RNA"
/db_xref="GeneID:1026935"
misc_feature 2727899..2728303
/note="potential protein location (hypothetical protein
SF2650 [Shigella flexneri 2a str. 301]) that overlaps RNA
(16S ribosomal RNA)"
mobile_element 2728350..2728788
/note="partial"
/mobile_element_type="insertion sequence:IS4"
gene complement(2728825..2729562)
/locus_tag="SF2652"
/db_xref="GeneID:1025685"
CDS complement(2728825..2729562)
/locus_tag="SF2652"
/note="Code: R; COG: COG0457"
/codon_start=1
/transl_table=11
/product="outer membrane biogenesis protein BamD"
/protein_id="NP_708441.1"
/db_xref="GeneID:1025685"
/translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRIEGMLRDYPDTQATRDALPLM
ENAYRQMQMNAQAEKVAKIIAANSSNT"
misc_feature complement(2728834..2729562)
/locus_tag="SF2652"
/note="outer membrane protein assembly factor BamD;
Region: PRK10866"
/db_xref="CDD:182792"
gene 2729697..2730677
/gene="rluD"
/locus_tag="SF2653"
/db_xref="GeneID:1027476"
CDS 2729697..2730677
/gene="rluD"
/locus_tag="SF2653"
/note="Code: J; COG: COG0564"
/codon_start=1
/transl_table=11
/product="23S rRNA pseudouridine synthase D"
/protein_id="NP_708442.1"
/db_xref="GeneID:1027476"
/translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
VVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
QALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL"
misc_feature 2729697..2730671
/gene="rluD"
/locus_tag="SF2653"
/note="23S rRNA pseudouridine(1911/1915/1917) synthase
RluD; Region: rluD; PRK11180"
/db_xref="CDD:183020"
gene 2730674..2731405
/gene="yfiH"
/locus_tag="SF2654"
/db_xref="GeneID:1027284"
CDS 2730674..2731405
/gene="yfiH"
/locus_tag="SF2654"
/note="Code: S; COG: COG1496"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708443.1"
/db_xref="GeneID:1027284"
/translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
DHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
MTADCLPVLFCNRAGTEVAAVHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
AFEVGAEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY
TENETFFSYRRDKTTGRMASFIWLI"
misc_feature 2730674..2731402
/gene="yfiH"
/locus_tag="SF2654"
/note="polyphenol oxidase; Region: PRK10723"
/db_xref="CDD:182677"
gene 2731535..2734108
/gene="clpB"
/locus_tag="SF2655"
/db_xref="GeneID:1027322"
CDS 2731535..2734108
/gene="clpB"
/locus_tag="SF2655"
/note="Code: O; COG: COG0542"
/codon_start=1
/transl_table=11
/product="protein disaggregation chaperone"
/protein_id="NP_708444.2"
/db_xref="GeneID:1027322"
/translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
DNFISSELFVLAALESRGTLADILKATGATTANITQAIEQMRGGESVNDQGAEDQRQA
LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
KVFVAEPSVQDTIAILRGVKERFELLHHVQITDPAIVAAATLSHRYIADRQLPDKAID
LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE
ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
Q"
misc_feature 2731535..2734105
/gene="clpB"
/locus_tag="SF2655"
/note="ATP-dependent chaperone ClpB; Region: PRK10865"
/db_xref="CDD:182791"
mobile_element complement(2734132..2735558)
/mobile_element_type="insertion sequence:IS4"
gene complement(2734145..2735491)
/locus_tag="SF2656"
/db_xref="GeneID:1027479"
CDS complement(2734145..2735491)
/locus_tag="SF2656"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_708445.1"
/db_xref="GeneID:1027479"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFGAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWESDLGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQMSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature complement(2734403..2735401)
/locus_tag="SF2656"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene 2735805..2736146
/gene="yfiA"
/locus_tag="SF2657"
/db_xref="GeneID:1027477"
CDS 2735805..2736146
/gene="yfiA"
/locus_tag="SF2657"
/note="Code: J; COG: COG1544"
/codon_start=1
/transl_table=11
/product="translation inhibitor protein RaiA"
/protein_id="NP_708446.1"
/db_xref="GeneID:1027477"
/translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
DANFVEEVEEE"
misc_feature 2735805..2736143
/gene="yfiA"
/locus_tag="SF2657"
/note="ribosome-associated translation inhibitor RaiA;
Region: PRK10324"
/db_xref="CDD:182378"
misc_feature order(2735814..2735816,2735820..2735822,2735826..2735828,
2735880..2735882,2735889..2735891,2735907..2735912,
2735922..2735924,2735934..2735936,2735961..2735963,
2735970..2735981,2735988..2735990,2735994..2735996,
2736003..2736005,2736009..2736011,2736018..2736020,
2736060..2736065,2736075..2736077)
/gene="yfiA"
/locus_tag="SF2657"
/note="30S subunit binding site [active]"
/db_xref="CDD:238308"
gene 2736396..2737556
/gene="pheA"
/locus_tag="SF2659"
/db_xref="GeneID:1027480"
CDS 2736396..2737556
/gene="pheA"
/locus_tag="SF2659"
/note="Code: E; COG: COG0077"
/codon_start=1
/transl_table=11
/product="bifunctional chorismate mutase/prephenate
dehydratase"
/protein_id="NP_708448.1"
/db_xref="GeneID:1027480"
/translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQN
FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
misc_feature 2736396..2737553
/gene="pheA"
/locus_tag="SF2659"
/note="bifunctional chorismate mutase/prephenate
dehydratase; Provisional; Region: pheA; PRK10622"
/db_xref="CDD:182594"
gene complement(2737599..2738720)
/gene="tyrA"
/locus_tag="SF2660"
/db_xref="GeneID:1025679"
CDS complement(2737599..2738720)
/gene="tyrA"
/locus_tag="SF2660"
/note="Code: E; COG: COG0287"
/codon_start=1
/transl_table=11
/product="bifunctional chorismate mutase/prephenate
dehydrogenase"
/protein_id="NP_708449.1"
/db_xref="GeneID:1025679"
/translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGKVKSRFGLPI
YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLEQG
DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
misc_feature complement(2737602..2738720)
/gene="tyrA"
/locus_tag="SF2660"
/note="bifunctional chorismate mutase/prephenate
dehydrogenase; Provisional; Region: tyrA; PRK11199"
/db_xref="CDD:183035"
gene complement(2738731..2739801)
/gene="aroF"
/locus_tag="SF2661"
/db_xref="GeneID:1027466"
CDS complement(2738731..2739801)
/gene="aroF"
/locus_tag="SF2661"
/note="Code: E; COG: COG0722"
/codon_start=1
/transl_table=11
/product="phospho-2-dehydro-3-deoxyheptonate aldolase"
/protein_id="NP_708450.1"
/db_xref="GeneID:1027466"
/translation="MHKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKTI
SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHCFVGINQAGQ
VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
MTDALLREIHQDLNGQLTARVA"
misc_feature complement(2738743..2739801)
/gene="aroF"
/locus_tag="SF2661"
/note="phospho-2-dehydro-3-deoxyheptonate aldolase;
Provisional; Region: PRK12755"
/db_xref="CDD:237190"
gene 2740011..2740376
/gene="yfiL"
/locus_tag="SF2662"
/db_xref="GeneID:1023590"
CDS 2740011..2740376
/gene="yfiL"
/locus_tag="SF2662"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_708451.2"
/db_xref="GeneID:1023590"
/translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
SAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQ
LHEVWQKRADENASTIRLN"
misc_feature 2740014..2740373
/gene="yfiL"
/locus_tag="SF2662"
/note="lipoprotein; Provisional; Region: PRK11443"
/db_xref="CDD:183138"
gene 2740526..2741044
/locus_tag="SF2663"
/db_xref="GeneID:1025672"
CDS 2740526..2741044
/locus_tag="SF2663"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708452.1"
/db_xref="GeneID:1025672"
/translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
TFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDASSRSGVKVNP
DVLMLARKKNDG"
misc_feature 2740619..2741026
/locus_tag="SF2663"
/note="YfiR/HmsC-like; Region: DUF4154; pfam13689"
/db_xref="CDD:433405"
gene 2741034..2742259
/gene="yfiN"
/locus_tag="SF2664"
/pseudo
/db_xref="GeneID:1026795"
misc_feature 2741034..2742259
/gene="yfiN"
/locus_tag="SF2664"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1788956 (409 aa). BLAST with
identity of 99% in 409 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 2742275..2742757
/gene="yfiB"
/locus_tag="SF2665"
/db_xref="GeneID:1023562"
CDS 2742275..2742757
/gene="yfiB"
/locus_tag="SF2665"
/note="Code: M; COG: COG2885"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="NP_708453.1"
/db_xref="GeneID:1023562"
/translation="MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG
DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE
GLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
"
misc_feature 2742275..2742754
/gene="yfiB"
/locus_tag="SF2665"
/note="OmpA family protein; Region: PRK09967"
/db_xref="CDD:182172"
gene complement(2742834..2743181)
/gene="rplS"
/locus_tag="SF2666"
/db_xref="GeneID:1025681"
CDS complement(2742834..2743181)
/gene="rplS"
/locus_tag="SF2666"
/note="Code: J; COG: COG0335"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L19"
/protein_id="NP_708454.1"
/db_xref="GeneID:1025681"
/translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE
RTGKAARIKERLN"
misc_feature complement(2742837..2743178)
/gene="rplS"
/locus_tag="SF2666"
/note="50S ribosomal protein L19; Provisional; Region:
rplS; PRK05338"
/db_xref="CDD:235418"
gene complement(2743223..2743990)
/gene="trmD"
/locus_tag="SF2667"
/db_xref="GeneID:1025670"
CDS complement(2743223..2743990)
/gene="trmD"
/locus_tag="SF2667"
/note="Code: J; COG: COG0336"
/codon_start=1
/transl_table=11
/product="tRNA (guanine-N(1)-)-methyltransferase"
/protein_id="NP_708455.1"
/db_xref="GeneID:1025670"
/translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
misc_feature complement(2743262..2743990)
/gene="trmD"
/locus_tag="SF2667"
/note="tRNA G37 N-methylase TrmD [Translation, ribosomal
structure and biogenesis]; Region: TrmD; COG0336"
/db_xref="CDD:440105"
gene complement(2744021..2744569)
/gene="rimM"
/locus_tag="SF2668"
/db_xref="GeneID:1026714"
CDS complement(2744021..2744569)
/gene="rimM"
/locus_tag="SF2668"
/note="Code: J; COG: COG0806"
/codon_start=1
/transl_table=11
/product="16S rRNA-processing protein RimM"
/protein_id="NP_708456.2"
/db_xref="GeneID:1026714"
/translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
EGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
GQVIKKVDLTTRSIEVDWDPGF"
misc_feature complement(2744024..2744542)
/gene="rimM"
/locus_tag="SF2668"
/note="16S rRNA-processing protein RimM; Provisional;
Region: rimM; PRK00122"
/db_xref="CDD:234650"
gene complement(2744588..2744836)
/gene="rpsP"
/locus_tag="SF2669"
/db_xref="GeneID:1025675"
CDS complement(2744588..2744836)
/gene="rpsP"
/locus_tag="SF2669"
/note="Code: J; COG: COG0228"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S16"
/protein_id="NP_708457.1"
/db_xref="GeneID:1025675"
/translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
misc_feature complement(2744609..2744836)
/gene="rpsP"
/locus_tag="SF2669"
/note="Ribosomal protein S16 [Translation, ribosomal
structure and biogenesis]; Region: RpsP; COG0228"
/db_xref="CDD:439998"
gene complement(2744973..2746334)
/gene="ffh"
/locus_tag="SF2670"
/db_xref="GeneID:1025680"
CDS complement(2744973..2746334)
/gene="ffh"
/locus_tag="SF2670"
/note="Code: N; COG: COG0541"
/codon_start=1
/transl_table=11
/product="signal recognition particle protein"
/protein_id="NP_708458.1"
/db_xref="GeneID:1025680"
/translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
VLMAGLQGAGKTTSVGKLGNFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
PGR"
misc_feature complement(2745060..2746334)
/gene="ffh"
/locus_tag="SF2670"
/note="Signal recognition particle GTPase [Intracellular
trafficking, secretion, and vesicular transport]; Region:
Ffh; COG0541"
/db_xref="CDD:440307"
gene 2746426..2747292
/locus_tag="SF2671"
/db_xref="GeneID:1027467"
CDS 2746426..2747292
/locus_tag="SF2671"
/note="Code: O; COG: COG0755"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708459.1"
/db_xref="GeneID:1027467"
/translation="MQRLEQRSPDAILLLFLIAQTVDITMPVFALLALVAYSVSLALI
VPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSGQNLSLLNVGSLVSLVIC
TVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEATPGMLMHIGLSLFSY
ATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHITQIGVVLLTLTLCT
GLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLA
YFGSRIVQQLIS"
misc_feature 2746498..2747286
/locus_tag="SF2671"
/note="ABC-type uncharacterized transport system, permease
component [General function prediction only]; Region:
YpjD; COG4137"
/db_xref="CDD:443312"
gene 2747337..2748599
/gene="yfjD"
/locus_tag="SF2672"
/db_xref="GeneID:1025198"
CDS 2747337..2748599
/gene="yfjD"
/locus_tag="SF2672"
/note="Code: R; COG: COG1253"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708460.3"
/db_xref="GeneID:1025198"
/translation="MIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRV
EKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAE
VLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGS
LSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSI
LRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPE
GTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVT
PQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGKYD
IDILDVQDNMIKQVKVFPVKPLRESVAE"
misc_feature 2747358..2748596
/gene="yfjD"
/locus_tag="SF2672"
/note="hypothetical protein; Provisional; Region:
PRK11573"
/db_xref="CDD:236933"
gene complement(2748654..2749247)
/gene="grpE"
/locus_tag="SF2673"
/db_xref="GeneID:1027472"
CDS complement(2748654..2749247)
/gene="grpE"
/locus_tag="SF2673"
/note="Code: O; COG: COG0576"
/codon_start=1
/transl_table=11
/product="heat shock protein GrpE"
/protein_id="NP_708461.1"
/db_xref="GeneID:1027472"
/translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
misc_feature complement(2748657..2749247)
/gene="grpE"
/locus_tag="SF2673"
/note="heat shock protein GrpE; Provisional; Region:
PRK10325"
/db_xref="CDD:182379"
misc_feature complement(2748930..2749073)
/gene="grpE"
/locus_tag="SF2673"
/note="2-helical coiled coil [structural motif]; Region:
2-helical coiled coil"
/db_xref="CDD:271355"
misc_feature complement(order(2748837..2748842,2748858..2748860,
2748867..2748875,2748879..2748884,2748933..2748938,
2748942..2748956,2748960..2748968,2748975..2748980,
2748984..2748989,2748996..2749001,2749008..2749013,
2749020..2749022,2749026..2749034,2749041..2749046,
2749050..2749055,2749062..2749067))
/gene="grpE"
/locus_tag="SF2673"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:271355"
misc_feature complement(order(2748672..2748674,2748681..2748683,
2748687..2748689,2748699..2748701,2748726..2748728,
2748774..2748788,2748792..2748797,2748801..2748803,
2748927..2748929,2748936..2748938,2749002..2749004,
2749026..2749028))
/gene="grpE"
/locus_tag="SF2673"
/note="Hsp70 (ATPase domain) interactions [polypeptide
binding]; other site"
/db_xref="CDD:271355"
misc_feature complement(2748837..2748884)
/gene="grpE"
/locus_tag="SF2673"
/note="2-helical coiled coil [structural motif]; Region:
2-helical coiled coil"
/db_xref="CDD:271355"
gene 2749370..2750248
/gene="ppnK"
/locus_tag="SF2674"
/db_xref="GeneID:1027465"
CDS 2749370..2750248
/gene="ppnK"
/locus_tag="SF2674"
/note="Code: R; COG: COG0061"
/codon_start=1
/transl_table=11
/product="inorganic polyphosphate/ATP-NAD kinase"
/protein_id="NP_708462.1"
/db_xref="GeneID:1027465"
/translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIA
HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
YFNTLSTKLGWSKKLF"
misc_feature 2749370..2750245
/gene="ppnK"
/locus_tag="SF2674"
/note="inorganic polyphosphate/ATP-NAD kinase;
Provisional; Region: ppnK; PRK03378"
/db_xref="CDD:235122"
gene 2750334..2751995
/gene="recN"
/locus_tag="SF2675"
/db_xref="GeneID:1025690"
CDS 2750334..2751995
/gene="recN"
/locus_tag="SF2675"
/note="Code: L; COG: COG0497"
/codon_start=1
/transl_table=11
/product="recombination and repair protein"
/protein_id="NP_708463.1"
/db_xref="GeneID:1025690"
/translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
NSGQLLTTSQNALALMADGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
QLDDQADSQETLALAVTKHHQQALETARALHQQRQQYAEELAQLITDSMHALSMPHGQ
FTIDVKYDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARK
METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
TDGAMTETHMQSLDKKARLQELARLLGGSEVTRNTLANAKELLAA"
misc_feature 2750334..2751992
/gene="recN"
/locus_tag="SF2675"
/note="recombination and repair protein; Provisional;
Region: PRK10869"
/db_xref="CDD:236781"
gene 2752144..2752485
/gene="smpA"
/locus_tag="SF2676"
/db_xref="GeneID:1026799"
CDS 2752144..2752485
/gene="smpA"
/locus_tag="SF2676"
/experiment="mass spectrum study"
/codon_start=1
/transl_table=11
/product="small membrane protein A"
/protein_id="NP_708464.3"
/db_xref="GeneID:1026799"
/translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT
NIDNKPALSGN"
misc_feature 2752144..2752482
/gene="smpA"
/locus_tag="SF2676"
/note="outer membrane protein assembly factor BamE;
Region: PRK11548"
/db_xref="CDD:183190"
gene complement(2752547..2752837)
/locus_tag="SF2677"
/db_xref="GeneID:1025698"
CDS complement(2752547..2752837)
/locus_tag="SF2677"
/note="Code: S; COG: COG2914"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708465.2"
/db_xref="GeneID:1025698"
/translation="MLGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
misc_feature complement(2752550..2752828)
/locus_tag="SF2677"
/note="RnfH family protein; Region: PRK01777"
/db_xref="CDD:234982"
gene complement(2752827..2753264)
/locus_tag="SF2678"
/db_xref="GeneID:1025684"
CDS complement(2752827..2753264)
/locus_tag="SF2678"
/note="Code: I; COG: COG2867"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708466.2"
/db_xref="GeneID:1025684"
/translation="MPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTP
GQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRI
EFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR"
misc_feature complement(2752830..2753264)
/locus_tag="SF2678"
/note="type II toxin-antitoxin system RatA family toxin;
Region: PRK10724"
/db_xref="CDD:182678"
misc_feature complement(order(2752863..2752865,2752872..2752880,
2752884..2752892,2752896..2752910,2752941..2752943,
2752947..2752949,2752953..2752955,2752959..2752961,
2752989..2752991,2752995..2752997,2753001..2753006,
2753037..2753039,2753043..2753045,2753061..2753063,
2753067..2753069,2753073..2753075,2753106..2753108,
2753112..2753114,2753118..2753120,2753124..2753126,
2753154..2753156,2753199..2753204,2753208..2753216,
2753241..2753243,2753247..2753249,2753253..2753255))
/locus_tag="SF2678"
/note="putative coenzyme Q binding site [chemical
binding]; other site"
/db_xref="CDD:176855"
gene 2753435..2753917
/gene="smpB"
/locus_tag="SF2679"
/db_xref="GeneID:1027251"
CDS 2753435..2753917
/gene="smpB"
/locus_tag="SF2679"
/note="Code: O; COG: COG0691"
/codon_start=1
/transl_table=11
/product="SsrA-binding protein"
/protein_id="NP_708467.1"
/db_xref="GeneID:1027251"
/translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
"
misc_feature 2753459..2753905
/gene="smpB"
/locus_tag="SF2679"
/note="SsrA-binding protein SmpB; Region: smpB; PRK05422"
/db_xref="CDD:235455"
misc_feature order(2753525..2753542,2753546..2753551,2753555..2753560,
2753567..2753569,2753618..2753620,2753705..2753722,
2753804..2753806)
/gene="smpB"
/locus_tag="SF2679"
/note="SmpB-tmRNA interface; other site"
/db_xref="CDD:187755"
gene 2754037..2754492
/gene="ssrA"
/locus_tag="SF4557"
/db_xref="GeneID:1025691"
tmRNA 2754037..2754492
/gene="ssrA"
/locus_tag="SF4557"
/product="10Sa RNA (tmRNA); tags incomplete translation
products for degradation"
/db_xref="GeneID:1025691"
gene 2754699..2755940
/locus_tag="SF2680"
/db_xref="GeneID:1025692"
CDS 2754699..2755940
/locus_tag="SF2680"
/note="Code: L; COG: COG0582"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="NP_708468.1"
/db_xref="GeneID:1025692"
/translation="MARQTKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQ
FRYIRPVTKTRAKKSIGPYPSVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEA
KTNTFQLVAERWWNVKKASVTEDYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQ
PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQ
LSQLMQTMRTASISLSTRCLFMWQLLTITRPAEAAEARWEEVDIEAQEWKIPAARMKM
NRDHTVPLSDEAIAVLEMMKPLSGNREFIFPSRIKPNQPMNSQTVNASLKRAGFGGVL
VSHGLRSIASTALNEQGFPPDAIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWANF
VMAADRGSMIEGGIKGMKLVG"
misc_feature 2754699..2755937
/locus_tag="SF2680"
/note="integrase; Provisional; Region: PRK09692"
/db_xref="CDD:170049"
mobile_element 2756085..2756852
/mobile_element_type="insertion sequence:IS1"
gene 2756140..2756415
/gene="insA"
/locus_tag="SF2681"
/db_xref="GeneID:1027474"
CDS 2756140..2756415
/gene="insA"
/locus_tag="SF2681"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708469.1"
/db_xref="GeneID:1027474"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2756161..>2756412
/gene="insA"
/locus_tag="SF2681"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2756442..2756837
/gene="insB"
/locus_tag="SF2682"
/db_xref="GeneID:1025683"
CDS 2756442..2756837
/gene="insB"
/locus_tag="SF2682"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708470.1"
/db_xref="GeneID:1025683"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRGTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 2756445..2756834
/gene="insB"
/locus_tag="SF2682"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
mobile_element 2756891..2758148
/mobile_element_type="insertion sequence:IS3"
gene 2756947..2757255
/locus_tag="SF2683"
/db_xref="GeneID:1025689"
CDS 2756947..2757255
/locus_tag="SF2683"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3 transposase InsE"
/protein_id="NP_708471.1"
/db_xref="GeneID:1025689"
/translation="MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSL
YESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK
"
misc_feature 2756980..2757237
/locus_tag="SF2683"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2757252..2758118
/locus_tag="SF2684"
/db_xref="GeneID:1027400"
CDS 2757252..2758118
/locus_tag="SF2684"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3A transposase InsF"
/protein_id="NP_708472.1"
/db_xref="GeneID:1027400"
/translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ
FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF
SPVSYRAHGLPVSENLLEQDFYASGPNQKWPGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLPCDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM
SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG
LNPEQFENQNLA"
misc_feature <2757252..2758100
/locus_tag="SF2684"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2758366..2758441)
/locus_tag="SF4498"
/db_xref="GeneID:3161784"
tRNA complement(2758366..2758441)
/locus_tag="SF4498"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161784"
gene 2759000..2761252
/locus_tag="SF2685"
/db_xref="GeneID:1025688"
CDS 2759000..2761252
/locus_tag="SF2685"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439272.1"
/db_xref="GeneID:1025688"
/translation="MFSIKPGPGNLPIDNPTLLSWNITDGDLNSKFNTLEYLNCITNI
INACGVYPQDLKDREIISTFHAEKVINDLLKNDYKISLSPDTTYRELNKAAQSSITAP
DRIGEGKTWVYQRDTMVERGDNSGVHQYGPAEHFTHIISDKPSPKDKYVAYAINIPDY
ELAADVYNINVTSPSGQQETFKILINPEHLRQTLERKSLTAVQKSQCEIITPKKPGEA
ILHAFNATYQQIRENMSEFARSHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPED
LCTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKI
SKDIESGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWKN
LHALKEKSLNGMPKTTPKSDQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSI
TPPLKNYNERLHNTNLFNPKYHEKTVMNYMEYLVTCQLNEEQMSSLLYERDDLSAIDF
SLLMKTIKAFSFGGDLLTLASKPGSTISSIPSERRILININHDFPNNGNLFNDFLFNH
QQDEQLAMAYMAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAWLNKGCSTYQQ
LYNEFHALYIDKAGIWSAFEGVFATKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVE
GTWPNKLQPRIYKNMGSNSVNIIINNTRKIIPPCKVFTLRGGSLNINIPRRSALLLGK
TGEPPNYLYL"
misc_feature 2759645..2760919
/locus_tag="SF2685"
/note="Alpha amylase catalytic domain found in bacterial
Alpha-amylases (also called
1,4-alpha-D-glucan-4-glucanohydrolase); Region:
AmyAc_bac1_AmyA; cd11315"
/db_xref="CDD:200454"
misc_feature order(2759801..2759806,2759813..2759818,2759933..2759935,
2759942..2759944,2760167..2760169,2760299..2760301,
2760305..2760310,2760314..2760319,2760440..2760442,
2760446..2760448,2760452..2760454,2760647..2760652,
2760662..2760664)
/locus_tag="SF2685"
/note="active site"
/db_xref="CDD:200454"
misc_feature order(2759930..2759932,2760215..2760217,2760290..2760292)
/locus_tag="SF2685"
/note="Ca binding site [ion binding]; other site"
/db_xref="CDD:200454"
misc_feature order(2760305..2760307,2760440..2760442,2760650..2760652)
/locus_tag="SF2685"
/note="catalytic site [active]"
/db_xref="CDD:200454"
misc_feature 2760950..2761213
/locus_tag="SF2685"
/note="Alpha amylase, C-terminal all-beta domain; Region:
Alpha-amylase_C; pfam02806"
/db_xref="CDD:426991"
gene 2761483..2762520
/locus_tag="SF2686"
/db_xref="GeneID:1025708"
CDS 2761483..2762520
/locus_tag="SF2686"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708473.3"
/db_xref="GeneID:1025708"
/translation="MSLLCAFFRNVDIFRLWLRNEHRHVTLHLIRGSLLMNALTAVQN
NAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRV
GKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAHLIGRS
NFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDDWEH
LDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEG
VWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYF
AYATHHYQTHQ"
misc_feature 2761606..2762508
/locus_tag="SF2686"
/note="carbon starvation induced protein CsiD; Region:
PRK02963"
/db_xref="CDD:235092"
misc_feature order(2761975..2761977,2762074..2762076,2762080..2762082,
2762095..2762097,2762191..2762193,2762467..2762469,
2762473..2762475)
/locus_tag="SF2686"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238154"
misc_feature order(2762065..2762067,2762071..2762073,2762416..2762418,
2762455..2762457)
/locus_tag="SF2686"
/note="active site"
/db_xref="CDD:238154"
misc_feature order(2762065..2762067,2762071..2762073,2762416..2762418)
/locus_tag="SF2686"
/note="iron coordination sites [ion binding]; other site"
/db_xref="CDD:238154"
gene 2762474..2763808
/gene="ygaF"
/locus_tag="SF2687"
/db_xref="GeneID:1027475"
CDS 2762474..2763808
/gene="ygaF"
/locus_tag="SF2687"
/note="Code: R; COG: COG0579"
/codon_start=1
/transl_table=11
/product="hydroxyglutarate oxidase"
/protein_id="NP_708474.1"
/db_xref="GeneID:1027475"
/translation="MAISLTPLTTTRRISKRKGIERMYDFVIIGGGIIGMSTAMQLID
VYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQN
GIRYDNCGKMLVATSQLEMERMRALWERTAANGIEREWINAVELREREPNITGLGGIF
VPSSGIVSYREVTAAMAKIFQARGGEIIYNAEVSALSEHKNGVVIRTRQGGEYEASTL
ISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGV
HLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILSSSGIRRVLQNHLRSGLGE
MKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIH
TCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAFNQ"
misc_feature 2762540..2763718
/gene="ygaF"
/locus_tag="SF2687"
/note="L-2-hydroxyglutarate oxidase; Region: PRK11728"
/db_xref="CDD:183292"
gene 2763831..2765279
/gene="gabD"
/locus_tag="SF2688"
/pseudo
/db_xref="GeneID:1025693"
misc_feature 2763831..2765279
/gene="gabD"
/locus_tag="SF2688"
/note="'Similar to Escherichia coli K12
succinate-semialdehyde dehydrogenase, NADP-dependent
activity gi: 1789015 (483 aa). BLAST with identity of 96%
in 483 aa. This CDS contains an in-frame stop codon. The
sequence has been checked and is believed to be correct.'"
/pseudo
gene 2765446..2766573
/gene="gabT"
/locus_tag="SF2689"
/db_xref="GeneID:1023533"
CDS 2765446..2766573
/gene="gabT"
/locus_tag="SF2689"
/note="Code: E; COG: COG0160"
/codon_start=1
/transl_table=11
/product="GABA transaminase"
/protein_id="NP_708475.1"
/db_xref="GeneID:1023533"
/translation="MLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQ
KVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGEYHGRTHYTLALTGKVN
PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIMIEPVQGE
GGFYAASPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKS
IAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDL
GQKLKDGLLAIAEKHPEIGDVRGLGSMIAIELFEDGDHSKPDAKLTAEIVARARDKGL
ILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIGQCFDEAKQ"
misc_feature 2765446..2766567
/gene="gabT"
/locus_tag="SF2689"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl18945"
/db_xref="CDD:450240"
misc_feature order(2765620..2765628,2765704..2765709,2765713..2765715,
2765908..2765910,2766007..2766009,2766013..2766018,
2766094..2766096)
/gene="gabT"
/locus_tag="SF2689"
/note="inhibitor-cofactor binding pocket [active]"
/db_xref="CDD:99735"
misc_feature order(2765623..2765628,2765704..2765709,2765908..2765910,
2766007..2766009,2766016..2766018,2766094..2766096)
/gene="gabT"
/locus_tag="SF2689"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature 2766094..2766096
/gene="gabT"
/locus_tag="SF2689"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene 2766811..2768211
/locus_tag="SF2690"
/pseudogene="unknown"
/db_xref="GeneID:1027471"
gene 2768232..2768894
/gene="ygaE"
/locus_tag="SF2691"
/db_xref="GeneID:1027478"
CDS 2768232..2768894
/gene="ygaE"
/locus_tag="SF2691"
/note="Code: K; COG: COG1802"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator CsiR"
/protein_id="NP_708477.2"
/db_xref="GeneID:1027478"
/translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLQ
EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEA
DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLPRDTARASELMRQHLLTPIPIIQQAMA
GN"
misc_feature 2768232..2768891
/gene="ygaE"
/locus_tag="SF2691"
/note="DNA-binding transcriptional regulator CsiR;
Provisional; Region: PRK11534"
/db_xref="CDD:183181"
gene complement(2768895..2769344)
/gene="ygaU"
/locus_tag="SF2692"
/db_xref="GeneID:1025686"
CDS complement(2768895..2769344)
/gene="ygaU"
/locus_tag="SF2692"
/note="Code: S; COG: COG1652"
/codon_start=1
/transl_table=11
/product="LysM domain/BON superfamily protein"
/protein_id="NP_708478.2"
/db_xref="GeneID:1025686"
/translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDAD
KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
misc_feature complement(2768901..2769344)
/gene="ygaU"
/locus_tag="SF2692"
/note="LysM domain/BON superfamily protein; Provisional;
Region: PRK11198"
/db_xref="CDD:236880"
gene complement(2769428..2769586)
/locus_tag="SF2693a"
/db_xref="GeneID:16608350"
CDS complement(2769428..2769586)
/locus_tag="SF2693a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439273.1"
/db_xref="GeneID:16608350"
/translation="MGFWRIVITIILPPIGVLLGKGFGWAFIINILLTLLGYIPGLIH
AFWVQTRD"
misc_feature complement(2769431..2769586)
/locus_tag="SF2693a"
/note="Membrane potential modulator PMP3/YqaE, plasma
membrane proteolipid 3 (PMP3)/Esi3/RCI2/UPF0057 family
[Energy production and conversion]; Region: YqaE; COG0401"
/db_xref="CDD:440170"
mobile_element complement(2769676..2771006)
/mobile_element_type="insertion sequence:IS2"
gene complement(2769687..2770592)
/locus_tag="SF2693"
/db_xref="GeneID:1027310"
CDS complement(2769687..2770592)
/locus_tag="SF2693"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_708479.1"
/db_xref="GeneID:1027310"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(2769690..2770592)
/locus_tag="SF2693"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(2770550..2770960)
/locus_tag="SF2694"
/db_xref="GeneID:1023454"
CDS complement(2770550..2770960)
/locus_tag="SF2694"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_708480.3"
/db_xref="GeneID:1023454"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(2770553..2770915)
/locus_tag="SF2694"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 2771105..2771404
/locus_tag="SF2695"
/db_xref="GeneID:1025687"
CDS 2771105..2771404
/locus_tag="SF2695"
/note="Code: K; COG: COG0640"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708481.1"
/db_xref="GeneID:1025687"
/translation="MTELAQLQASTEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
TRITGLSASATSQHLARMRDEGLINSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
misc_feature 2771138..2771395
/locus_tag="SF2695"
/note="DNA-binding transcriptional regulator, ArsR family
[Transcription]; Region: ArsR; COG0640"
/db_xref="CDD:440405"
gene 2771414..2771938
/gene="ygaP"
/locus_tag="SF2696"
/db_xref="GeneID:1027473"
CDS 2771414..2771938
/gene="ygaP"
/locus_tag="SF2696"
/note="Code: P; COG: COG0607"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708482.1"
/db_xref="GeneID:1027473"
/translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKRAGLP
VAVNKSQPLPLMRQVQIAAGGLILNGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
MARLLDKMPWNQRA"
misc_feature 2771420..2771722
/gene="ygaP"
/locus_tag="SF2696"
/note="Member of the Rhodanese Homology Domain
superfamily. This CD includes Escherichia coli YgaP, and
similar uncharacterized putative rhodanese-related
sulfurtransferases; Region: RHOD_YgaP; cd01527"
/db_xref="CDD:238785"
misc_feature 2771603..2771605
/gene="ygaP"
/locus_tag="SF2696"
/note="active site residue [active]"
/db_xref="CDD:238785"
misc_feature 2771756..2771914
/gene="ygaP"
/locus_tag="SF2696"
/note="Protein of unknown function (DUF2892); Region:
DUF2892; pfam11127"
/db_xref="CDD:463227"
gene complement(2771985..2772389)
/gene="stpA"
/locus_tag="SF2697"
/db_xref="GeneID:1027464"
CDS complement(2771985..2772389)
/gene="stpA"
/locus_tag="SF2697"
/note="Code: R; COG: COG2916"
/codon_start=1
/transl_table=11
/product="DNA binding protein, nucleoid-associated"
/protein_id="NP_708483.1"
/db_xref="GeneID:1027464"
/translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
misc_feature complement(2771988..2772389)
/gene="stpA"
/locus_tag="SF2697"
/note="DNA-binding protein StpA; Region: PRK10328"
/db_xref="CDD:182380"
gene 2773057..2773506
/locus_tag="SF2698"
/db_xref="GeneID:1025707"
CDS 2773057..2773506
/locus_tag="SF2698"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708484.1"
/db_xref="GeneID:1025707"
/translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
misc_feature 2773063..2773479
/locus_tag="SF2698"
/note="L-alanine exporter; Region: AlaE; pfam06610"
/db_xref="CDD:399538"
gene complement(2773543..2773887)
/gene="ygaC"
/locus_tag="SF2699"
/db_xref="GeneID:1025888"
CDS complement(2773543..2773887)
/gene="ygaC"
/locus_tag="SF2699"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708485.1"
/db_xref="GeneID:1025888"
/translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
ERYLNGLFGEAS"
misc_feature complement(2773555..2773887)
/gene="ygaC"
/locus_tag="SF2699"
/note="hypothetical protein; Provisional; Region:
PRK10556"
/db_xref="CDD:182545"
gene 2774039..2774368
/locus_tag="SF2700"
/pseudogene="unknown"
/db_xref="GeneID:1026803"
gene 2774616..2774861
/gene="nrdH"
/locus_tag="SF2701"
/db_xref="GeneID:1025701"
CDS 2774616..2774861
/gene="nrdH"
/locus_tag="SF2701"
/note="Code: O; COG: COG0695"
/codon_start=1
/transl_table=11
/product="glutaredoxin-like protein"
/protein_id="NP_708487.1"
/db_xref="GeneID:1025701"
/translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
misc_feature 2774616..2774858
/gene="nrdH"
/locus_tag="SF2701"
/note="glutaredoxin-like protein NrdH; Region: PRK10329"
/db_xref="CDD:182381"
misc_feature order(2774646..2774648,2774655..2774657)
/gene="nrdH"
/locus_tag="SF2701"
/note="catalytic residues [active]"
/db_xref="CDD:239274"
gene 2774858..2775268
/gene="nrdI"
/locus_tag="SF2702"
/db_xref="GeneID:1027460"
CDS 2774858..2775268
/gene="nrdI"
/locus_tag="SF2702"
/note="Code: F; COG: COG1780"
/codon_start=1
/transl_table=11
/product="ribonucleotide reductase stimulatory protein"
/protein_id="NP_708488.1"
/db_xref="GeneID:1027460"
/translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL
IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
misc_feature 2774867..2775262
/gene="nrdI"
/locus_tag="SF2702"
/note="Flavodoxin NrdI, NrdF-interacting activator of
class Ib ribonucleotide reductase [Nucleotide transport
and metabolism]; Region: NrdI; COG1780"
/db_xref="CDD:441386"
gene 2775280..2777385
/gene="nrdE"
/locus_tag="SF2703"
/db_xref="GeneID:1025704"
CDS 2775280..2777385
/gene="nrdE"
/locus_tag="SF2703"
/note="Code: F; COG: COG0209"
/codon_start=1
/transl_table=11
/product="ribonucleotide-diphosphate reductase subunit
alpha"
/protein_id="NP_708489.2"
/db_xref="GeneID:1025704"
/translation="MDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFS
SQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHTSGFRFQTFLGAWKFYTSYTLK
TFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRG
ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV
IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG
VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDELVADERIRKKYLNA
RDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLD
YARTGHDISCNLGSLNIAHTMDSPDFSRTVETAVRGLTAVSDMSHIRSVPSIEAGNAA
SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYTITWHALRTSMLLARERGETFA
GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSCITLPTREMWAQLRDDVMRYGIY
NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQD
AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR
LRQMALEGTEIEGCVSCAL"
misc_feature 2775283..2777382
/gene="nrdE"
/locus_tag="SF2703"
/note="ribonucleoside-diphosphate reductase, class 1b,
alpha subunit; Region: RNR_1b_NrdE; TIGR04170"
/db_xref="CDD:211905"
gene 2777395..2778354
/gene="nrdF"
/locus_tag="SF2704"
/db_xref="GeneID:1025695"
CDS 2777395..2778354
/gene="nrdF"
/locus_tag="SF2704"
/note="Code: F; COG: COG0208"
/codon_start=1
/transl_table=11
/product="ribonucleotide-diphosphate reductase subunit
beta"
/protein_id="NP_708490.1"
/db_xref="GeneID:1025695"
/translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHA
RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL
KSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNTNKALMNLGYEPLFPAEMA
EVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF"
misc_feature 2777410..2778351
/gene="nrdF"
/locus_tag="SF2704"
/note="ribonucleoside-diphosphate reductase, class 1b,
beta subunit; Region: RNR_1b_NrdF; TIGR04171"
/db_xref="CDD:275027"
misc_feature order(2777419..2777421,2777452..2777454,2777473..2777475,
2777668..2777673,2777680..2777682,2777689..2777694,
2777701..2777703,2777710..2777712,2777758..2777763,
2777770..2777772)
/gene="nrdF"
/locus_tag="SF2704"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153108"
misc_feature order(2777485..2777487,2777593..2777595,2777686..2777688,
2777695..2777697,2777707..2777709,2777962..2777967,
2777977..2777979)
/gene="nrdF"
/locus_tag="SF2704"
/note="putative radical transfer pathway [active]"
/db_xref="CDD:153108"
misc_feature order(2777593..2777595,2777686..2777688,2777695..2777697,
2777866..2777868,2777968..2777970,2777977..2777979)
/gene="nrdF"
/locus_tag="SF2704"
/note="diiron center [ion binding]; other site"
/db_xref="CDD:153108"
misc_feature 2777707..2777709
/gene="nrdF"
/locus_tag="SF2704"
/note="tyrosyl radical; other site"
/db_xref="CDD:153108"
gene 2778709..2779911
/gene="proV"
/locus_tag="SF2705"
/db_xref="GeneID:1027461"
CDS 2778709..2779911
/gene="proV"
/locus_tag="SF2705"
/note="Code: E; COG: COG1125"
/codon_start=1
/transl_table=11
/product="glycine betaine transporter ATP-binding subunit"
/protein_id="NP_708491.2"
/db_xref="GeneID:1027461"
/translation="MAIKLKIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
DREGVNNG"
misc_feature 2778709..2779908
/gene="proV"
/locus_tag="SF2705"
/note="proline/glycine betaine ABC transporter ATP-binding
protein ProV; Region: PRK10070"
/db_xref="CDD:182221"
gene 2779904..2780968
/gene="proW"
/locus_tag="SF2706"
/db_xref="GeneID:1023535"
CDS 2779904..2780968
/gene="proW"
/locus_tag="SF2706"
/note="Code: E; COG: COG1174"
/codon_start=1
/transl_table=11
/product="glycine betaine transporter membrane protein"
/protein_id="NP_708492.1"
/db_xref="GeneID:1023535"
/translation="MADQNNPWDTTPAADSAAQSADAWGTPTTAPADGGGADWLTSTP
APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL
GMPAPVAIIVFALITWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
GNRRWYTTGPVGLLTRPFIK"
misc_feature 2779904..2780965
/gene="proW"
/locus_tag="SF2706"
/note="proline/glycine betaine ABC transporter permease
ProW; Region: PRK10952"
/db_xref="CDD:236805"
misc_feature order(2780384..2780389,2780396..2780401,2780414..2780416,
2780441..2780452,2780456..2780485,2780492..2780497,
2780501..2780503,2780549..2780554,2780558..2780560,
2780564..2780566,2780573..2780578,2780582..2780584,
2780594..2780599,2780606..2780608,2780657..2780659,
2780699..2780704,2780711..2780713,2780732..2780743,
2780750..2780755,2780792..2780797,2780825..2780830,
2780837..2780842,2780846..2780851,2780858..2780863)
/gene="proW"
/locus_tag="SF2706"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119394"
misc_feature order(2780459..2780503,2780732..2780749)
/gene="proW"
/locus_tag="SF2706"
/note="conserved gate region [active]"
/db_xref="CDD:119394"
misc_feature order(2780501..2780503,2780534..2780536,2780750..2780752,
2780786..2780788,2780795..2780797,2780825..2780827)
/gene="proW"
/locus_tag="SF2706"
/note="putative PBP binding loops [active]"
/db_xref="CDD:119394"
misc_feature order(2780609..2780647,2780663..2780668,2780678..2780680)
/gene="proW"
/locus_tag="SF2706"
/note="ABC-ATPase subunit interface [active]"
/db_xref="CDD:119394"
gene 2781026..2782018
/gene="proX"
/locus_tag="SF2707"
/db_xref="GeneID:1027463"
CDS 2781026..2782018
/gene="proX"
/locus_tag="SF2707"
/note="Code: E; COG: COG2113"
/codon_start=1
/transl_table=11
/product="glycine betaine transporter periplasmic subunit"
/protein_id="NP_708493.2"
/db_xref="GeneID:1027463"
/translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
TLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKK
FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPG
WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLF
AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK"
misc_feature 2781026..2782015
/gene="proX"
/locus_tag="SF2707"
/note="proline/glycine betaine ABC transporter
substrate-binding protein ProX; Region: proX; PRK11119"
/db_xref="CDD:236852"
misc_feature order(2781137..2781139,2781143..2781145,2781281..2781283,
2781368..2781370,2781494..2781496,2781506..2781511,
2781650..2781652)
/gene="proX"
/locus_tag="SF2707"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:270356"
gene 2782210..2783389
/locus_tag="SF2708"
/pseudogene="unknown"
/db_xref="GeneID:1025699"
gene 2783513..2784250
/locus_tag="SF2709"
/db_xref="GeneID:1027468"
CDS 2783513..2784250
/locus_tag="SF2709"
/note="Code: E; COG: COG1296"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708495.1"
/db_xref="GeneID:1027468"
/translation="MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALSVMAMDVRHVLYGPSLRSRII
QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
VAILAGIVCGCLTALIQAFWQGAPDEL"
misc_feature 2783555..2784244
/locus_tag="SF2709"
/note="Predicted branched-chain amino acid permease
(azaleucine resistance) [Amino acid transport and
metabolism]; Region: AzlC; COG1296"
/db_xref="CDD:440907"
gene 2784240..2784575
/gene="ygaH"
/locus_tag="SF2710"
/db_xref="GeneID:1027459"
CDS 2784240..2784575
/gene="ygaH"
/locus_tag="SF2710"
/codon_start=1
/transl_table=11
/product="L-valine exporter"
/protein_id="NP_708496.1"
/db_xref="GeneID:1027459"
/translation="MSYEVLLLGLLVGAANYCFRYLPLRLRVGNARPTKRGAVGILLD
TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
LAWKVMAII"
misc_feature 2784240..2784569
/gene="ygaH"
/locus_tag="SF2710"
/note="L-valine transporter subunit YgaH; Region:
PRK10408"
/db_xref="CDD:182434"
gene 2784666..2785197
/locus_tag="SF2711"
/pseudogene="unknown"
/db_xref="GeneID:1025694"
gene 2785324..2786496
/gene="emrA"
/locus_tag="SF2712"
/pseudo
/db_xref="GeneID:1025702"
misc_feature 2785324..2786496
/gene="emrA"
/locus_tag="SF2712"
/note="Similar to Escherichia coli K12 multidrug
resistance secretion protein gi: 1789041 (391 aa). BLAST
with identity of 97% in 391 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene 2786513..2788051
/gene="emrB"
/locus_tag="SF2713"
/db_xref="GeneID:1027462"
CDS 2786513..2788051
/gene="emrB"
/locus_tag="SF2713"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="multidrug resistant protein emrB"
/protein_id="NP_708498.2"
/db_xref="GeneID:1027462"
/translation="MQQQKPLEGAQLVIMTIALSLATFMQVLNSTIANVAIPTIAGNL
GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSL
NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
MLDRGKELDCFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
RLVTFSFIMYAVCFYWRAYTFEPGMDFCASAWPQFIQGFAVVCFFMPLTTITLSGLPP
ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
GGAH"
misc_feature 2786522..2788018
/gene="emrB"
/locus_tag="SF2713"
/note="multidrug efflux MFS transporter permease subunit
EmrB; Region: EmrB; NF000391"
/db_xref="CDD:411083"
gene complement(2788115..2788630)
/gene="ygaG"
/locus_tag="SF2714"
/db_xref="GeneID:1025700"
CDS complement(2788115..2788630)
/gene="ygaG"
/locus_tag="SF2714"
/note="Code: T; COG: COG1854"
/codon_start=1
/transl_table=11
/product="S-ribosylhomocysteinase"
/protein_id="NP_708499.1"
/db_xref="GeneID:1025700"
/translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
KEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILEREVRINSNEELA
LPKEKLQELHI"
misc_feature complement(2788148..2788630)
/gene="ygaG"
/locus_tag="SF2714"
/note="S-ribosylhomocysteine lyase; Region: PRK02260"
/db_xref="CDD:179399"
gene complement(2788780..2790337)
/gene="gshA"
/locus_tag="SF2715"
/pseudogene="unknown"
/db_xref="GeneID:1027442"
gene complement(2790410..2790838)
/locus_tag="SF2716"
/db_xref="GeneID:1025717"
CDS complement(2790410..2790838)
/locus_tag="SF2716"
/note="Code: S; COG: COG1238"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708501.1"
/db_xref="GeneID:1025717"
/translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLV
LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
misc_feature complement(2790425..2790826)
/locus_tag="SF2716"
/note="Uncharacterized membrane protein YqaA, VTT domain
[Function unknown]; Region: YqaA; COG1238"
/db_xref="CDD:440851"
gene complement(2790835..2791401)
/gene="yqaB"
/locus_tag="SF2717"
/db_xref="GeneID:1025387"
CDS complement(2790835..2791401)
/gene="yqaB"
/locus_tag="SF2717"
/note="Code: R; COG: COG0637"
/codon_start=1
/transl_table=11
/product="fructose-1-P/6-phosphogluconate phosphatase"
/protein_id="NP_708502.1"
/db_xref="GeneID:1025387"
/translation="MYERYAGLIFDMDGTILDTAPTHRKAWREVLGHYGLQYDIQAMI
ALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGR
RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT
QCVVFEDADFGIQAARAAGMDAVDVRLL"
misc_feature complement(2790838..2791401)
/gene="yqaB"
/locus_tag="SF2717"
/note="fructose-1-phosphate/6-phosphogluconate
phosphatase; Region: PRK10725"
/db_xref="CDD:182679"
misc_feature complement(order(2790889..2790894,2790901..2790906,
2790976..2790978,2791072..2791077,2791357..2791371))
/gene="yqaB"
/locus_tag="SF2717"
/note="active site"
/db_xref="CDD:319808"
misc_feature complement(order(2790889..2790894,2790901..2790906,
2790976..2790978,2791072..2791077,2791357..2791371))
/gene="yqaB"
/locus_tag="SF2717"
/note="active site"
/db_xref="CDD:319808"
gene complement(2791549..2791625)
/locus_tag="SF4499"
/db_xref="GeneID:3161843"
tRNA complement(2791549..2791625)
/locus_tag="SF4499"
/product="tRNA-Arg"
/codon_recognized="CGU"
/db_xref="GeneID:3161843"
misc_feature 2791655..2792341
/note="potential protein location (hypothetical protein
SF2718 [Shigella flexneri 2a str. 301]) that overlaps RNA
(tRNA-R)"
gene complement(2791690..2791766)
/locus_tag="SF4500"
/db_xref="GeneID:3161805"
tRNA complement(2791690..2791766)
/locus_tag="SF4500"
/product="tRNA-Arg"
/codon_recognized="CGU"
/db_xref="GeneID:3161805"
gene complement(2791831..2791907)
/locus_tag="SF4501"
/db_xref="GeneID:3161795"
tRNA complement(2791831..2791907)
/locus_tag="SF4501"
/product="tRNA-Arg"
/codon_recognized="CGU"
/db_xref="GeneID:3161795"
gene complement(2791972..2792048)
/locus_tag="SF4502"
/db_xref="GeneID:3161818"
tRNA complement(2791972..2792048)
/locus_tag="SF4502"
/product="tRNA-Arg"
/codon_recognized="CGU"
/db_xref="GeneID:3161818"
gene complement(2792052..2792144)
/locus_tag="SF4503"
/db_xref="GeneID:3161791"
tRNA complement(2792052..2792144)
/locus_tag="SF4503"
/product="tRNA-Ser"
/codon_recognized="AGC"
/db_xref="GeneID:3161791"
gene complement(2792460..2792645)
/gene="csrA"
/locus_tag="SF2719"
/db_xref="GeneID:1027470"
CDS complement(2792460..2792645)
/gene="csrA"
/locus_tag="SF2719"
/note="Code: T; COG: COG1551"
/codon_start=1
/transl_table=11
/product="carbon storage regulator"
/protein_id="NP_708504.1"
/db_xref="GeneID:1027470"
/translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
EEIYQRIQAEKSQQSSY"
misc_feature complement(2792466..2792645)
/gene="csrA"
/locus_tag="SF2719"
/note="carbon storage regulator CsrA; Region: PRK01712"
/db_xref="CDD:234973"
gene complement(2792880..2795510)
/gene="alaS"
/locus_tag="SF2720"
/db_xref="GeneID:1025713"
CDS complement(2792880..2795510)
/gene="alaS"
/locus_tag="SF2720"
/note="Code: J; COG: COG0013"
/codon_start=1
/transl_table=11
/product="alanyl-tRNA synthetase"
/protein_id="NP_708505.2"
/db_xref="GeneID:1025713"
/translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
KGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSA
THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
PIETNIMNLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
AAALPAALASVKGWVSAKLQ"
misc_feature complement(2792886..2795504)
/gene="alaS"
/locus_tag="SF2720"
/note="Alanyl-tRNA synthetase [Translation, ribosomal
structure and biogenesis]; Region: AlaS; COG0013"
/db_xref="CDD:439784"
gene complement(2795638..2796138)
/gene="recX"
/locus_tag="SF2721"
/db_xref="GeneID:1025697"
CDS complement(2795638..2796138)
/gene="recX"
/locus_tag="SF2721"
/note="Code: R; COG: COG2137"
/codon_start=1
/transl_table=11
/product="recombination regulator RecX"
/protein_id="NP_708506.1"
/db_xref="GeneID:1025697"
/translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN
GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
REATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
WRNFAD"
misc_feature complement(2795641..2796132)
/gene="recX"
/locus_tag="SF2721"
/note="recombination regulator RecX; Reviewed; Region:
recX; PRK00117"
/db_xref="CDD:234646"
gene complement(2796381..2797442)
/gene="recA"
/locus_tag="SF2722"
/db_xref="GeneID:1027454"
CDS complement(2796381..2797442)
/gene="recA"
/locus_tag="SF2722"
/note="Code: L; COG: COG0468"
/codon_start=1
/transl_table=11
/product="recombinase A"
/protein_id="NP_708507.2"
/db_xref="GeneID:1027454"
/translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
TPDFSVDDSEGVAETNEDF"
misc_feature complement(2796399..2797442)
/gene="recA"
/locus_tag="SF2722"
/note="recombinase A; Provisional; Region: recA; PRK09354"
/db_xref="CDD:236476"
gene complement(2797522..2798019)
/gene="ygaD"
/locus_tag="SF2723"
/db_xref="GeneID:1025712"
CDS complement(2797522..2798019)
/gene="ygaD"
/locus_tag="SF2723"
/note="Code: R; COG: COG1546"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708508.2"
/db_xref="GeneID:1025712"
/translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSI
SGIAGPDGGSEEKPVGTVWFAFATARGEGITWRECFSGDRDAVRRQATAYALQTLWQQ
FLQNT"
misc_feature complement(2797528..2798019)
/gene="ygaD"
/locus_tag="SF2723"
/note="nicotinamide-nucleotide amidase; Region: PRK03661"
/db_xref="CDD:179627"
gene complement(2798164..2799249)
/gene="mltB"
/locus_tag="SF2724"
/db_xref="GeneID:1027450"
CDS complement(2798164..2799249)
/gene="mltB"
/locus_tag="SF2724"
/note="Code: M; COG: COG2951"
/codon_start=1
/transl_table=11
/product="murein hydrolase B"
/protein_id="NP_708509.2"
/db_xref="GeneID:1027450"
/translation="MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAIMAN
GQAPGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
ITRYNHSTHYAMAVWQLGQAVALARVQ"
misc_feature complement(2798167..2799249)
/gene="mltB"
/locus_tag="SF2724"
/note="murein hydrolase B; Provisional; Region: PRK10760"
/db_xref="CDD:236754"
gene 2799505..2800067
/gene="srlA"
/locus_tag="SF2725"
/pseudo
/db_xref="GeneID:1027448"
misc_feature 2799505..2800067
/gene="srlA"
/locus_tag="SF2725"
/note="'Similar to Escherichia coli K12 PTS system,
glucitol/sorbitol-specific IIC component, one of two gi:
1789054 (187 aa). BLAST with identity of 92% in 131 aa.
This CDS ontains frameshift. The sequence has been checked
and is believed to be correct.'"
/pseudo
gene 2800064..2801023
/gene="srlE"
/locus_tag="SF2726"
/db_xref="GeneID:1025710"
CDS 2800064..2801023
/gene="srlE"
/locus_tag="SF2726"
/codon_start=1
/transl_table=11
/product="PTS system glucitol/sorbitol-specific
transporter subunit IIBC"
/protein_id="NP_708510.1"
/db_xref="GeneID:1025710"
/translation="MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQ
LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
misc_feature 2800067..2801020
/gene="srlE"
/locus_tag="SF2726"
/note="PTS system, glucitol/sorbitol-specific, IIBC
component; Region: EIIBC-GUT; TIGR00825"
/db_xref="CDD:129905"
gene 2801034..2801405
/gene="srlB"
/locus_tag="SF2727"
/db_xref="GeneID:1025719"
CDS 2801034..2801405
/gene="srlB"
/locus_tag="SF2727"
/codon_start=1
/transl_table=11
/product="PTS system glucitol/sorbitol-specific
transporter subunit IIA"
/protein_id="NP_708511.1"
/db_xref="GeneID:1025719"
/translation="MTVIYQTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
HGELKGALHPGLQFSLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
AGPVPDDIAPGSVLKFESVKE"
misc_feature 2801034..2801393
/gene="srlB"
/locus_tag="SF2727"
/note="PTS glucitol/sorbitol transporter subunit IIA;
Region: PRK10377"
/db_xref="CDD:182419"
gene 2801409..2802188
/gene="srlD"
/locus_tag="SF2728"
/db_xref="GeneID:1027455"
CDS 2801409..2802188
/gene="srlD"
/locus_tag="SF2728"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="sorbitol-6-phosphate dehydrogenase"
/protein_id="NP_708512.1"
/db_xref="GeneID:1027455"
/translation="MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQ
EINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
GVGLTQSLALDLAEYGITVHSLMLGNLLKSRMFQSLLPQYATKLGIKPDQVEQYYIDK
VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
misc_feature 2801409..2802185
/gene="srlD"
/locus_tag="SF2728"
/note="sorbitol-6-phosphate dehydrogenase; Provisional;
Region: PRK12384"
/db_xref="CDD:183489"
gene 2802293..2802652
/gene="gutM"
/locus_tag="SF2729"
/db_xref="GeneID:1025714"
CDS 2802293..2802652
/gene="gutM"
/locus_tag="SF2729"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator GutM"
/protein_id="NP_708513.1"
/db_xref="GeneID:1025714"
/translation="MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVDR
SSGRFKPRVVVAIALDDQQCIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPH
DPLSQNALSLALKLKRG"
misc_feature 2802293..2802646
/gene="gutM"
/locus_tag="SF2729"
/note="transcriptional regulator GutM; Region: PRK10234"
/db_xref="CDD:182322"
gene 2802719..2803492
/gene="srlR"
/locus_tag="SF2730"
/db_xref="GeneID:1027469"
CDS 2802719..2803492
/gene="srlR"
/locus_tag="SF2730"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor SrlR"
/protein_id="NP_708514.1"
/db_xref="GeneID:1027469"
/translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
VLQIVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
FEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
misc_feature 2802719..2803486
/gene="srlR"
/locus_tag="SF2730"
/note="DNA-binding transcriptional repressor; Region:
srlR; PRK10434"
/db_xref="CDD:182457"
gene 2803524..2804450
/gene="gutQ"
/locus_tag="SF2731"
/db_xref="GeneID:1025715"
CDS 2803524..2804450
/gene="gutQ"
/locus_tag="SF2731"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708515.4"
/db_xref="GeneID:1025715"
/translation="MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIG
KKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDK
SIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQ
ARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLG
LVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVL
MKRKITAAPVVDENGKLTGAINLQDFYQAGII"
misc_feature 2803524..2804447
/gene="gutQ"
/locus_tag="SF2731"
/note="arabinose-5-phosphate isomerase GutQ; Region: gutQ;
PRK11543"
/db_xref="CDD:183186"
gene complement(2804447..2806036)
/gene="ygaA"
/locus_tag="SF2732"
/db_xref="GeneID:1027449"
CDS complement(2804447..2806036)
/gene="ygaA"
/locus_tag="SF2732"
/note="Code: T; COG: COG3604"
/codon_start=1
/transl_table=11
/product="2-component transcriptional regulator"
/protein_id="NP_708516.3"
/db_xref="GeneID:1027449"
/translation="MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGI
GHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLE
AIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFVGQNLIGALTLDGMQP
DQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDATPFEAVKQTQMIGLSPG
MTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESV
AESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQ
RVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVIL
LAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARATRNGD
EVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQNHHNWAACA
RMLETDVANLHRLAKRLGLKD"
misc_feature complement(2804450..2805955)
/gene="ygaA"
/locus_tag="SF2732"
/note="nitric oxide reductase transcriptional regulator
NorR; Region: PRK05022"
/db_xref="CDD:235331"
gene 2806148..2807587
/locus_tag="SF2733"
/db_xref="GeneID:1025213"
CDS 2806148..2807587
/locus_tag="SF2733"
/note="Code: C; COG: COG0426"
/codon_start=1
/transl_table=11
/product="anaerobic nitric oxide reductase
flavorubredoxin"
/protein_id="NP_708517.1"
/db_xref="GeneID:1025213"
/translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
FRNKRASAFGSHGWSGGAMDRLSTRLQDAGFEMSLSLKAKWRPDQDALELCREHGREI
ARQWALAPLPQSTVNTVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT
PWSEVPDNFLCPECSLGKDVFDELASEAK"
misc_feature 2806148..2807584
/locus_tag="SF2733"
/note="anaerobic nitric oxide reductase flavorubredoxin;
Provisional; Region: PRK05452"
/db_xref="CDD:235475"
gene 2807584..2808717
/gene="ygbD"
/locus_tag="SF2734"
/db_xref="GeneID:1027452"
CDS 2807584..2808717
/gene="ygbD"
/locus_tag="SF2734"
/note="Code: R; COG: COG0446"
/codon_start=1
/transl_table=11
/product="NADH:flavorubredoxin oxidoreductase"
/protein_id="NP_708518.1"
/db_xref="GeneID:1027452"
/translation="MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSIDEYNKP
DLSHVISQGQRADDLTRQTAGEFAGQFNLRLFPHTWVTDIDAEAHVVKSQNNQWQYDK
LVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDF
CRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILA
TLDHQRSIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNADIYALGDCAE
INGQVLPFLQPIQLSGMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLR
WQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFVLLKTLPV"
misc_feature 2807584..2808714
/gene="ygbD"
/locus_tag="SF2734"
/note="NADH:flavorubredoxin reductase NorW; Region:
PRK04965"
/db_xref="CDD:179902"
gene complement(2808845..2811097)
/gene="hypF"
/locus_tag="SF2735"
/db_xref="GeneID:1027457"
CDS complement(2808845..2811097)
/gene="hypF"
/locus_tag="SF2735"
/note="Code: O; COG: COG0068"
/codon_start=1
/transl_table=11
/product="transcriptional regulatory protein"
/protein_id="NP_708519.2"
/db_xref="GeneID:1027457"
/translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
GVEVRLLEDPETFLVQLHQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQI
VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
KGIGGFHLACDARNSNAVATLRERKHRPAKPLAVMLPVAESLPDAARQLLTTPAAPIV
LVDKKYVPELCDDIAPGLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
EQALADLQGIADGFLLHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALVLPPGFKNVP
PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYIV
HDVHPGYVSSQWASEMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE
NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPE
TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
LAASCDGVTHPVTMPRVDNQLDLATFWQQWLNWQALVNQRAWAFHDALAQGFAALMRE
QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
RWLAGEVQNG"
misc_feature complement(<2810954..2811073)
/gene="hypF"
/locus_tag="SF2735"
/note="Region: Acylphosphatase; cl00551"
/db_xref="CDD:444972"
misc_feature complement(2808881..2810974)
/gene="hypF"
/locus_tag="SF2735"
/note="[NiFe] hydrogenase maturation protein HypF; Region:
hypF; TIGR00143"
/db_xref="CDD:272929"
gene complement(2811250..2811777)
/gene="hydN"
/locus_tag="SF2736"
/db_xref="GeneID:1025721"
CDS complement(2811250..2811777)
/gene="hydN"
/locus_tag="SF2736"
/note="Code: C; COG: COG1142"
/codon_start=1
/transl_table=11
/product="formate dehydrogenase-H ferredoxin subunit"
/protein_id="NP_708520.2"
/db_xref="GeneID:1025721"
/translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVPVMQERCIGCKTCVVACPYG
AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
EQLSAEKRRRTALMF"
misc_feature complement(2811259..2811777)
/gene="hydN"
/locus_tag="SF2736"
/note="electron transport protein HydN; Region: PRK10330"
/db_xref="CDD:182382"
gene complement(2811926..2812936)
/gene="ascG"
/locus_tag="SF2737"
/db_xref="GeneID:1027456"
CDS complement(2811926..2812936)
/gene="ascG"
/locus_tag="SF2737"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="ascBF operon repressor"
/protein_id="NP_708521.2"
/db_xref="GeneID:1027456"
/translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESS
YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRNNSSHSVW
CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALSQHGIALNEKLIA
NGKWTPASGAEGVETLLERGAKFSALVASNDDMAIGAIKALHERGVAVPEQVSVIGFD
DIAIAPYIVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAL
SR"
misc_feature complement(2812730..2812933)
/gene="ascG"
/locus_tag="SF2737"
/note="helix_turn _helix lactose operon repressor; Region:
HTH_LACI; smart00354"
/db_xref="CDD:197675"
misc_feature complement(order(2812772..2812777,2812781..2812786,
2812793..2812795,2812802..2812804,2812841..2812843,
2812850..2812855,2812868..2812870,2812877..2812882,
2812886..2812900))
/gene="ascG"
/locus_tag="SF2737"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:143331"
misc_feature complement(2812775..2812804)
/gene="ascG"
/locus_tag="SF2737"
/note="domain linker motif [active]"
/db_xref="CDD:143331"
misc_feature complement(2811950..2812756)
/gene="ascG"
/locus_tag="SF2737"
/note="ligand binding domain of DNA transcription
iso-repressor GalS, which is one of two regulatory
proteins involved in galactose transport and metabolism;
Region: PBP1_GalS-like; cd06270"
/db_xref="CDD:380494"
misc_feature complement(order(2812085..2812090,2812166..2812168,
2812262..2812267,2812589..2812591,2812601..2812603,
2812643..2812645,2812649..2812660,2812685..2812687,
2812694..2812696,2812709..2812711,2812733..2812735,
2812754..2812756))
/gene="ascG"
/locus_tag="SF2737"
/note="dimer interface (closed form) [polypeptide
binding]; other site"
/db_xref="CDD:380494"
misc_feature complement(order(2812109..2812111,2812193..2812195,
2812271..2812273,2812346..2812348,2812565..2812567,
2812712..2812714))
/gene="ascG"
/locus_tag="SF2737"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:380494"
gene complement(2813079..2814788)
/gene="hycE"
/locus_tag="SF2738"
/db_xref="GeneID:1025709"
CDS complement(2813079..2814788)
/gene="hycE"
/locus_tag="SF2738"
/note="Code: C; COG: COG3261"
/codon_start=1
/transl_table=11
/product="hydrogenase 3 large subunit"
/protein_id="NP_708522.2"
/db_xref="GeneID:1025709"
/translation="MSEEKLGQHYLAALNEAFLGVVLDHAWQTKDQLTVTVKVNYLPE
VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
EVERLHPHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
MVRASGLARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
LRYMLRGNTVSYAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
PLK"
misc_feature complement(2813178..2814626)
/gene="hycE"
/locus_tag="SF2738"
/note="Ni,Fe-hydrogenase III large subunit [Energy
production and conversion]; Region: HycE2; COG3261"
/db_xref="CDD:442492"
gene complement(2814806..2815729)
/gene="hycD"
/locus_tag="SF2739"
/db_xref="GeneID:1027458"
CDS complement(2814806..2815729)
/gene="hycD"
/locus_tag="SF2739"
/note="Code: C; COG: COG0650"
/codon_start=1
/transl_table=11
/product="hydrogenase 3 membrane-spanning protein"
/protein_id="NP_708523.1"
/db_xref="GeneID:1027458"
/translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
DIIKLLGRQSVGPDASGWMFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
VMKWGISLKQLVVLQMFVGVFIPWGQMETFTVGGLLLALVIAIVKLVVGVLVIALFEN
SMARLRLDITPRITWAGFGFAFLAFVSLLAA"
misc_feature complement(2814815..2815729)
/gene="hycD"
/locus_tag="SF2739"
/note="Formate hydrogenlyase subunit HyfC [Energy
production and conversion]; Region: HyfC; COG0650"
/db_xref="CDD:440415"
gene complement(2815732..2817549)
/gene="hycC"
/locus_tag="SF2740"
/db_xref="GeneID:1027451"
CDS complement(2815732..2817549)
/gene="hycC"
/locus_tag="SF2740"
/note="Code: CP; COG: COG0651"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit 3"
/protein_id="NP_708524.2"
/db_xref="GeneID:1027451"
/translation="MSPPLFWHFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVG
VSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAA
AVCAVIASNLGMFVVMAEVMALCAVFLTSNSKEGKLWFALRRLGTLLLVIACWLLWQR
YGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALF
STVVMKIGLLGMLTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALMEHNIQRLLAYH
TLENIGIILLGLGLGLGLGLGLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKS
VLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIY
QSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATC
APLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLIACP
LLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKW
LNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA"
misc_feature complement(2815735..2817549)
/gene="hycC"
/locus_tag="SF2740"
/note="formate hydrogenlyase subunit 3; Reviewed; Region:
PRK08042"
/db_xref="CDD:181206"
gene complement(2817586..2818197)
/gene="hycB"
/locus_tag="SF2741"
/db_xref="GeneID:1025711"
CDS complement(2817586..2818197)
/gene="hycB"
/locus_tag="SF2741"
/note="Code: C; COG: COG1142"
/codon_start=1
/transl_table=11
/product="hydrogenase-3 iron-sulfur protein"
/protein_id="NP_708525.1"
/db_xref="GeneID:1025711"
/translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEK
ESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
RPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
TKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK"
misc_feature complement(2817697..2818188)
/gene="hycB"
/locus_tag="SF2741"
/note="HycB, HydN and similar proteins; Region: HycB_like;
cd10554"
/db_xref="CDD:319876"
gene complement(2818322..2818783)
/gene="hycA"
/locus_tag="SF2742"
/db_xref="GeneID:1025724"
CDS complement(2818322..2818783)
/gene="hycA"
/locus_tag="SF2742"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase regulatory protein HycA"
/protein_id="NP_708526.1"
/db_xref="GeneID:1025724"
/translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGM
IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA"
misc_feature complement(2818328..2818783)
/gene="hycA"
/locus_tag="SF2742"
/note="formate hydrogenlyase regulator HycA; Region:
PRK10198"
/db_xref="CDD:182298"
gene 2818983..2819345
/gene="hypA"
/locus_tag="SF2743"
/db_xref="GeneID:1025706"
CDS 2818983..2819345
/gene="hypA"
/locus_tag="SF2743"
/note="Code: R; COG: COG0375"
/codon_start=1
/transl_table=11
/product="hydrogenase nickel incorporation protein"
/protein_id="NP_708527.1"
/db_xref="GeneID:1025706"
/translation="MGGDMHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVE
TSSLAFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDML
QIVADDGLQIRRIEIDQE"
misc_feature 2818995..2819336
/gene="hypA"
/locus_tag="SF2743"
/note="hydrogenase/urease nickel incorporation protein
HypA; Region: hypA; PRK03681"
/db_xref="CDD:179630"
gene 2819349..2820221
/gene="hypB"
/locus_tag="SF2744"
/db_xref="GeneID:1027419"
CDS 2819349..2820221
/gene="hypB"
/locus_tag="SF2744"
/note="Code: OK; COG: COG0378"
/codon_start=1
/transl_table=11
/product="hydrogenase nickel incorporation protein HypB"
/protein_id="NP_708528.1"
/db_xref="GeneID:1027419"
/translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPQMKITGIK
APEFTPSQTEEGDLHYGHGEAGTHTPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
MDQWLNWLETQRCA"
misc_feature 2819349..2820218
/gene="hypB"
/locus_tag="SF2744"
/note="hydrogenase nickel incorporation protein HypB;
Provisional; Region: PRK10463"
/db_xref="CDD:182479"
misc_feature order(2819682..2819705,2819784..2819786,2819793..2819795,
2819919..2819921,2819928..2819930,2820060..2820065,
2820069..2820074,2820156..2820164)
/gene="hypB"
/locus_tag="SF2744"
/note="active site"
/db_xref="CDD:349775"
misc_feature order(2819682..2819690,2819766..2819774,2819781..2819786,
2819844..2819846,2819931..2819933,2819937..2819942,
2819949..2819951,2819994..2819999,2820015..2820020,
2820063..2820065,2820072..2820074,2820081..2820086,
2820162..2820164)
/gene="hypB"
/locus_tag="SF2744"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:349775"
misc_feature order(2819844..2819849,2819940..2819942)
/gene="hypB"
/locus_tag="SF2744"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:349775"
gene 2820212..2820484
/gene="hypC"
/locus_tag="SF2745"
/db_xref="GeneID:1023542"
CDS 2820212..2820484
/gene="hypC"
/locus_tag="SF2745"
/note="Code: O; COG: COG0298"
/codon_start=1
/transl_table=11
/product="hydrogenase assembly chaperone"
/protein_id="NP_708529.1"
/db_xref="GeneID:1023542"
/translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK"
misc_feature 2820212..2820481
/gene="hypC"
/locus_tag="SF2745"
/note="HypC/HybG/HupF family hydrogenase formation
chaperone; Region: PRK10409"
/db_xref="CDD:182435"
gene 2820484..2821605
/gene="hypD"
/locus_tag="SF2746"
/db_xref="GeneID:1027421"
CDS 2820484..2821605
/gene="hypD"
/locus_tag="SF2746"
/note="Code: O; COG: COG0409"
/codon_start=1
/transl_table=11
/product="hydrogenase isoenzymes formation protein HypD"
/protein_id="NP_708530.1"
/db_xref="GeneID:1027421"
/translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA"
misc_feature 2820487..2821590
/gene="hypD"
/locus_tag="SF2746"
/note="hydrogenase expression/formation protein HypD;
Region: hypD; TIGR00075"
/db_xref="CDD:272892"
gene 2821644..2822612
/gene="hypE"
/locus_tag="SF2747"
/db_xref="GeneID:1026811"
CDS 2821644..2822612
/gene="hypE"
/locus_tag="SF2747"
/note="Code: O; COG: COG0309"
/codon_start=1
/transl_table=11
/product="hydrogenase expression/formation protein HypE"
/protein_id="NP_708531.2"
/db_xref="GeneID:1026811"
/translation="MQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTD
SYVIDPLFFPGGNIGKLAICGTANDVAGSGAIPRYLSCGFILEEGLPMETLKAVVTSM
AETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSG
TLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVH
EFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAA
LHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC"
misc_feature 2821644..2822609
/gene="hypE"
/locus_tag="SF2747"
/note="hydrogenase expression/formation protein HypE;
Region: hypE; TIGR02124"
/db_xref="CDD:273984"
gene 2822686..2824764
/gene="fhlA"
/locus_tag="SF2748"
/db_xref="GeneID:1025757"
CDS 2822686..2824764
/gene="fhlA"
/locus_tag="SF2748"
/note="Code: T; COG: COG3604"
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase transcriptional activator
FhlA"
/protein_id="NP_708532.2"
/db_xref="GeneID:1025757"
/translation="MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALA
DNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFC
ETWPQLAAGGLYPKFGHYCLMPLAAGGHIFGGCEFIRYDERPWSEKEFNRLQTFTQIV
SVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYF
DIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINL
YERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLR
QIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVL
KQVEMVAQSDSTVLILGETGSGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL
FGHERGAFTGANAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSN
KIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAF
TFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDI
ALPEPETPPAATVVAQEGEDEYQLIVRVLKETNSVVAGPKGAAQRLGLKRTTLLSRMK
RLGIDKSALI"
misc_feature 2822695..2824752
/gene="fhlA"
/locus_tag="SF2748"
/note="formate hydrogenlyase transcriptional activator
FlhA; Region: PRK15429"
/db_xref="CDD:237965"
gene complement(2824801..2825154)
/gene="ygbA"
/locus_tag="SF2749"
/db_xref="GeneID:1027403"
CDS complement(2824801..2825154)
/gene="ygbA"
/locus_tag="SF2749"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708533.1"
/db_xref="GeneID:1027403"
/translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
VPELPEKYRPKKPRE"
misc_feature complement(2824831..2825145)
/gene="ygbA"
/locus_tag="SF2749"
/note="Nitrous oxide-stimulated promoter; Region: YgbA_NO;
pfam11756"
/db_xref="CDD:432053"
mobile_element complement(2825202..2825969)
/mobile_element_type="insertion sequence:IS1"
gene complement(2825217..2825720)
/gene="insB"
/locus_tag="SF2750"
/db_xref="GeneID:1025720"
CDS complement(2825217..2825720)
/gene="insB"
/locus_tag="SF2750"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708534.1"
/db_xref="GeneID:1025720"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature complement(2825220..2825612)
/gene="insB"
/locus_tag="SF2750"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2825948..2826142)
/locus_tag="SF2752a"
/db_xref="GeneID:16608351"
CDS complement(2825948..2826142)
/locus_tag="SF2752a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439274.1"
/db_xref="GeneID:16608351"
/translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIVSIG
EPFFFRVIVPFKIKVMLPTY"
gene 2826218..2828779
/gene="mutS"
/locus_tag="SF2752"
/db_xref="GeneID:1027453"
CDS 2826218..2828779
/gene="mutS"
/locus_tag="SF2752"
/note="Code: L; COG: COG0249"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein MutS"
/protein_id="NP_708536.1"
/db_xref="GeneID:1027453"
/translation="MSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDA
KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
ADRETMAAELQRSNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
TAELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
GVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
misc_feature 2826224..2828776
/gene="mutS"
/locus_tag="SF2752"
/note="DNA mismatch repair protein MutS; Provisional;
Region: PRK05399"
/db_xref="CDD:235444"
gene 2828885..2829537
/gene="pphB"
/locus_tag="SF2753"
/pseudo
/db_xref="GeneID:1025705"
misc_feature 2828885..2829537
/gene="pphB"
/locus_tag="SF2753"
/note="Similar to Escherichia coli K12 protein phosphatase
2 gi: 1789090 (219 aa). BLAST with identity of 95% in 218
aa. This CDS contains an in-frame stop codon. The sequence
has been checked and is believed to be correct."
/pseudo
gene complement(2829588..2830385)
/gene="ygbI"
/locus_tag="SF2754"
/db_xref="GeneID:1025726"
CDS complement(2829588..2830385)
/gene="ygbI"
/locus_tag="SF2754"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DeoR family transcriptional regulator"
/protein_id="NP_708537.1"
/db_xref="GeneID:1025726"
/translation="MSAGQRKEQKLIPVERRQIILEMVAEKGIVSIAELTDRINVSHM
TIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVLP
GSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENR
SCVGEAAATMLCSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDA
TKYGQVATWLALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
misc_feature complement(2829597..2830355)
/gene="ygbI"
/locus_tag="SF2754"
/note="DNA-binding transcriptional repressor YgbI; Region:
trans_reg_YgbI; NF040890"
/db_xref="CDD:468826"
gene 2830551..2831459
/locus_tag="SF2755"
/pseudo
/db_xref="GeneID:1025381"
misc_feature 2830551..2831459
/locus_tag="SF2755"
/note="Similar to Escherichia coli K12 dehydrogenase gi:
1789092 (303 aa). BLAST with identity of 99% in 303 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
mobile_element 2831677..2832940
/mobile_element_type="insertion sequence:IS600"
gene 2831741..2832043
/locus_tag="SF2756"
/db_xref="GeneID:1025725"
CDS 2831741..2832043
/locus_tag="SF2756"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_708538.1"
/db_xref="GeneID:1025725"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQW
VTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 2831741..2832013
/locus_tag="SF2756"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2832079..2832897
/locus_tag="SF2757"
/db_xref="GeneID:1025763"
CDS 2832079..2832897
/locus_tag="SF2757"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_708539.1"
/db_xref="GeneID:1025763"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVVPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMTA"
misc_feature <2832079..2832870
/locus_tag="SF2757"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2833131..2835227)
/locus_tag="SF2758"
/db_xref="GeneID:1025756"
CDS complement(2833131..2835227)
/locus_tag="SF2758"
/note="Code: L; COG: COG1425"
/codon_start=1
/transl_table=11
/product="phage transposase"
/protein_id="NP_708540.2"
/db_xref="GeneID:1025756"
/translation="MQSYVTVNDLLGVPGMPATTKGIRQALQRFSRDLGDVSRRREGT
KAIEYHIDCLPEITRKALRERYVEQLVATENNVSEVKAVTRKTRNPDAVQAIEAYRGS
PQLMEERLNALTENQRWVSEARAALVVEVLKLESAGNPGRLKAINFLVEKARKGELPE
RLQQAAVNANAKRGANRTISRDPLYQWVLKYNQSQNAAERLLLLAPGKRDEIKPEEIS
WLPEFLAQYRQVNGRPMSEAYEDFVAEWQRRHADEPYMLEVMPSYDVVRYAMKKLPEV
VKQKGRVTGSEYRQLEGFTRRDWTAMPVNYVWIGDGHGMKLKCAHPIHGRPFSPEVTF
VIDGGTRFVVGWSLDLAENVFAVAGAIQHGIRNHGKPFLYYSDNGSGETADMLDKEVV
GILPRLGIKHPTGIAGNPQGRGIIERLNRTLPMRIARRYRTYFGKGADRESLRVLNRD
LRSAFNALQQDKPLNDRQKAAMRELPSWAELIEAIREGVEWYNNRPHSELPMKPNGRH
YSPTEFRKKRQAEEDTEIEWLSDLELRDMFRPMVERPVRRCEIQWLNNIYYAPELRDE
HGRKVLISYDIHDAERITVRRKDGSFICEAIWNGNKRAAFAVSAEYHKQQQRIKGMRK
RAEEKIRDAEDEGIQILEHKQAEPWLSNVYRPVGNVVAVQQPEYEEEHDEEFERDFRL
GMQKLFAMQEEDDPLA"
misc_feature complement(2834757..2835200)
/locus_tag="SF2758"
/note="Helix-Turn-Helix DNA binding domain of
transcription regulators from the MerR superfamily;
Region: HTH_MerR-SF; cl02600"
/db_xref="CDD:470628"
misc_feature complement(2833665..>2834444)
/locus_tag="SF2758"
/note="Transposase InsO and inactivated derivatives
[Mobilome: prophages, transposons]; Region: Tra5; COG2801"
/db_xref="CDD:442053"
misc_feature complement(2833443..2833625)
/locus_tag="SF2758"
/note="Mu transposase, C-terminal; Region: Mu-transpos_C;
pfam09299"
/db_xref="CDD:430512"
gene complement(2835229..2835480)
/locus_tag="SF2759"
/db_xref="GeneID:1027441"
CDS complement(2835229..2835480)
/locus_tag="SF2759"
/note="Code: K; COG: COG3423"
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="NP_708541.1"
/db_xref="GeneID:1027441"
/translation="MRQREDSDRDWPSLKIQLALKDNGWSSFRELSLHAGYAQDSLKA
VVRTPNKKYERVISDAIGVPPEIIWPSRYRNDGFIRKAS"
misc_feature complement(2835259..2835465)
/locus_tag="SF2759"
/note="Predicted transcriptional regulator, lambda
repressor-like DNA-binding domain [Transcription]; Region:
SfsB; COG3423"
/db_xref="CDD:442649"
gene 2835645..2836208
/locus_tag="SF2760"
/db_xref="GeneID:1025718"
CDS 2835645..2836208
/locus_tag="SF2760"
/codon_start=1
/transl_table=11
/product="regulatory protein"
/protein_id="NP_708542.1"
/db_xref="GeneID:1025718"
/translation="MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGT
LKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTGEGDVELKDSKEPKKENADNVDA
QILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLP
DEKVREIYALSEAKGDHLNLPQKAASA"
misc_feature 2835699..2835893
/locus_tag="SF2760"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cl22854"
/db_xref="CDD:473980"
gene complement(2836385..2837428)
/locus_tag="SF2761"
/pseudogene="unknown"
/db_xref="GeneID:1027420"
gene complement(2837428..2838021)
/gene="padI"
/locus_tag="SF2762"
/db_xref="GeneID:1027443"
CDS complement(2837428..2838021)
/gene="padI"
/locus_tag="SF2762"
/note="Code: H; COG: COG0163"
/codon_start=1
/transl_table=11
/product="phenylacrylic acid decarboxylase-like protein"
/protein_id="NP_708544.1"
/db_xref="GeneID:1027443"
/translation="MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIE
LETPYSARDVAALADFSHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGL
VGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE"
misc_feature complement(2837467..2838018)
/gene="padI"
/locus_tag="SF2762"
/note="non-oxidative hydroxyarylic acid decarboxylases
subunit B; Region: VdcB; NF041206"
/db_xref="CDD:469110"
gene 2838168..2838575
/locus_tag="SF2763"
/db_xref="GeneID:1026814"
CDS 2838168..2838575
/locus_tag="SF2763"
/note="Code: K; COG: COG1846"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="NP_708545.1"
/db_xref="GeneID:1026814"
/translation="MALRNKAFHQLRQLFQQHTARWQHELPDLTKPQYAVMRAIADKP
GIEQVALIEAAVSTKATLAEMLARMENRGLVRREHDVADKRRRFVWLTAEGEKLLAAA
IPIGDSVDEEFLGRLSGEEQELFMQLVRKMMST"
misc_feature 2838189..2838566
/locus_tag="SF2763"
/note="DNA-binding transcriptional regulator, MarR family
[Transcription]; Region: MarR; COG1846"
/db_xref="CDD:441451"
gene complement(2838695..2839723)
/locus_tag="SF2764"
/db_xref="GeneID:1027440"
CDS complement(2838695..2839723)
/locus_tag="SF2764"
/note="Code: K; COG: COG0568"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor RpoS"
/protein_id="NP_708546.1"
/db_xref="GeneID:1027440"
/translation="MFRQGITGRSHLMSQNTLKVHDLNEDAEFDENGVEVFDEKALVE
EEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVAS
RRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATW
WIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPV
DDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLF
ELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGL
NIEALFRK"
misc_feature complement(2838704..2839678)
/locus_tag="SF2764"
/note="RNA polymerase sigma factor RpoS; Validated;
Region: PRK05657"
/db_xref="CDD:235548"
gene complement(2839750..2840889)
/gene="nlpD"
/locus_tag="SF2765"
/db_xref="GeneID:1025716"
CDS complement(2839750..2840889)
/gene="nlpD"
/locus_tag="SF2765"
/note="Code: M; COG: COG0739"
/codon_start=1
/transl_table=11
/product="lipoprotein NlpD"
/protein_id="NP_708547.2"
/db_xref="GeneID:1025716"
/translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
ANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENG
RIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVG
QTLQVGNASGTPITGGNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSA
NKMLPNNKPTATTVTAPVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASE
GGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLV
REQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR"
misc_feature complement(2839753..2840889)
/gene="nlpD"
/locus_tag="SF2765"
/note="murein hydrolase activator NlpD; Region: nlpD;
PRK10871"
/db_xref="CDD:236782"
gene complement(2841029..2841655)
/gene="pcm"
/locus_tag="SF2766"
/db_xref="GeneID:1025767"
CDS complement(2841029..2841655)
/gene="pcm"
/locus_tag="SF2766"
/note="Code: O; COG: COG2518"
/codon_start=1
/transl_table=11
/product="protein-L-isoaspartate O-methyltransferase"
/protein_id="NP_708548.1"
/db_xref="GeneID:1025767"
/translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLETGTGSGYQTAILAHLVQHVCS
VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
misc_feature complement(2841032..2841655)
/gene="pcm"
/locus_tag="SF2766"
/note="protein-L-isoaspartate(D-aspartate)
O-methyltransferase; Region: pcm; PRK00312"
/db_xref="CDD:178974"
misc_feature complement(order(2841212..2841214,2841260..2841268,
2841341..2841346,2841392..2841412))
/gene="pcm"
/locus_tag="SF2766"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(2841649..2842410)
/gene="surE"
/locus_tag="SF2767"
/db_xref="GeneID:1025770"
CDS complement(2841649..2842410)
/gene="surE"
/locus_tag="SF2767"
/note="Code: R; COG: COG0496"
/codon_start=1
/transl_table=11
/product="5'/3'-nucleotidase SurE"
/protein_id="NP_708549.2"
/db_xref="GeneID:1025770"
/translation="MRILLSNYDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
QDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
misc_feature complement(2841676..2842410)
/gene="surE"
/locus_tag="SF2767"
/note="5'(3')-nucleotidase/polyphosphatase; Provisional;
Region: surE; PRK00346"
/db_xref="CDD:234732"
gene complement(2842391..2843440)
/gene="truD"
/locus_tag="SF2768"
/db_xref="GeneID:1027447"
CDS complement(2842391..2843440)
/gene="truD"
/locus_tag="SF2768"
/note="Code: S; COG: COG0585"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase D"
/protein_id="NP_708550.1"
/db_xref="GeneID:1027447"
/translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
LVRILKNGCNTRFVADALAKFLKIHSREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
VVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQ
AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
RELINTTGDYAHIAE"
misc_feature complement(2842418..2843440)
/gene="truD"
/locus_tag="SF2768"
/note="tRNA pseudouridine synthase D; Reviewed; Region:
truD; PRK00984"
/db_xref="CDD:234884"
misc_feature complement(2843342..2843362)
/gene="truD"
/locus_tag="SF2768"
/note="Permutation of conserved domain. [active]"
/db_xref="CDD:211340"
misc_feature complement(2843201..2843212)
/gene="truD"
/locus_tag="SF2768"
/note="active site"
/db_xref="CDD:211340"
gene complement(2843437..2843916)
/gene="ispF"
/locus_tag="SF2769"
/db_xref="GeneID:1024297"
CDS complement(2843437..2843916)
/gene="ispF"
/locus_tag="SF2769"
/note="Code: I; COG: COG0245"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase"
/protein_id="NP_708551.1"
/db_xref="GeneID:1024297"
/translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
misc_feature complement(2843452..2843916)
/gene="ispF"
/locus_tag="SF2769"
/note="YgbB family; Region: YgbB; pfam02542"
/db_xref="CDD:460584"
gene complement(2843916..2844626)
/gene="ispD"
/locus_tag="SF2770"
/db_xref="GeneID:1025758"
CDS complement(2843916..2844626)
/gene="ispD"
/locus_tag="SF2770"
/note="Code: I; COG: COG1211"
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase"
/protein_id="NP_708552.1"
/db_xref="GeneID:1025758"
/translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
LLAHPRVTRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDVQWV
LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
DLALAEFYLTRTIHQENT"
misc_feature complement(2843931..2844605)
/gene="ispD"
/locus_tag="SF2770"
/note="D-ribitol-5-phosphate cytidylyltransferase; Region:
ispD; PRK00155"
/db_xref="CDD:234670"
misc_feature complement(order(2843988..2843990,2844303..2844311,
2844363..2844365,2844372..2844383,2844546..2844548,
2844567..2844584,2844588..2844590))
/gene="ispD"
/locus_tag="SF2770"
/note="substrate binding site [active]"
/db_xref="CDD:133009"
misc_feature complement(order(2844000..2844005,2844015..2844026,
2844039..2844041,2844048..2844053,2844057..2844062,
2844138..2844155,2844210..2844212,2844216..2844218,
2844240..2844242,2844300..2844302))
/gene="ispD"
/locus_tag="SF2770"
/note="dimer interface [active]"
/db_xref="CDD:133009"
gene complement(2844645..2844956)
/gene="ftsB"
/locus_tag="SF2771"
/db_xref="GeneID:1025759"
CDS complement(2844645..2844956)
/gene="ftsB"
/locus_tag="SF2771"
/note="Code: O; COG: COG2919"
/codon_start=1
/transl_table=11
/product="cell division protein FtsB"
/protein_id="NP_708553.1"
/db_xref="GeneID:1025759"
/translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAALQATNA
KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
R"
misc_feature complement(2844648..2844911)
/gene="ftsB"
/locus_tag="SF2771"
/note="cell division protein FtsB; Reviewed; Region: ftsB;
PRK00888"
/db_xref="CDD:179156"
gene complement(2845150..2845473)
/gene="ygbE"
/locus_tag="SF2772"
/db_xref="GeneID:1025768"
CDS complement(2845150..2845473)
/gene="ygbE"
/locus_tag="SF2772"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708554.1"
/db_xref="GeneID:1025768"
/translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
IYGSNTLFFFLYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
MWLLG"
misc_feature complement(2845153..2845473)
/gene="ygbE"
/locus_tag="SF2772"
/note="Protein of unknown function (DUF3561); Region:
DUF3561; pfam12084"
/db_xref="CDD:432318"
gene complement(2845523..2846128)
/gene="cysC"
/locus_tag="SF2773"
/db_xref="GeneID:1026815"
CDS complement(2845523..2846128)
/gene="cysC"
/locus_tag="SF2773"
/note="Code: P; COG: COG0529"
/codon_start=1
/transl_table=11
/product="adenylyl-sulfate kinase"
/protein_id="NP_708555.1"
/db_xref="GeneID:1026815"
/translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
AGALEEALHKLSVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
misc_feature complement(2845526..2846116)
/gene="cysC"
/locus_tag="SF2773"
/note="adenylylsulfate kinase; Provisional; Region:
PRK03846"
/db_xref="CDD:179661"
misc_feature complement(order(2845649..2845654,2845703..2845705,
2845799..2845807,2845874..2845876,2845883..2845885,
2845898..2845900,2845925..2845927,2846000..2846011,
2846015..2846020))
/gene="cysC"
/locus_tag="SF2773"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:238985"
gene complement(2846128..2847555)
/gene="cysN"
/locus_tag="SF2774"
/db_xref="GeneID:1027446"
CDS complement(2846128..2847555)
/gene="cysN"
/locus_tag="SF2774"
/note="Code: P; COG: COG2895"
/codon_start=1
/transl_table=11
/product="sulfate adenylyltransferase"
/protein_id="NP_708556.1"
/db_xref="GeneID:1027446"
/translation="MNTVLAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
KHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
SMPWYSGLTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGMLASGRVEVGQ
RVKVLPSGVESNVARIVTFDGDREEVFAGEAITLVLTDEIDISRGDLLLAADEALPAV
QSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNG
IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAASSEFSA
FELELNALVRRHFPHWGARDLLGDK"
misc_feature complement(2846137..2847555)
/gene="cysN"
/locus_tag="SF2774"
/note="sulfate adenylyltransferase subunit 1; Provisional;
Region: cysN; PRK05124"
/db_xref="CDD:235349"
gene complement(2847557..2848465)
/gene="cysD"
/locus_tag="SF2775"
/db_xref="GeneID:1025766"
CDS complement(2847557..2848465)
/gene="cysD"
/locus_tag="SF2775"
/note="Code: EH; COG: COG0175"
/codon_start=1
/transl_table=11
/product="sulfate adenylyltransferase"
/protein_id="NP_708557.1"
/db_xref="GeneID:1025766"
/translation="MAQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
TSERQGRVIDRDQAGSMELKKRQGYF"
misc_feature complement(2847560..2848465)
/gene="cysD"
/locus_tag="SF2775"
/note="sulfate adenylyltransferase subunit CysD; Region:
PRK05253"
/db_xref="CDD:235375"
gene 2848717..2849754
/gene="iap"
/locus_tag="SF2776"
/db_xref="GeneID:1027424"
CDS 2848717..2849754
/gene="iap"
/locus_tag="SF2776"
/note="Code: R; COG: COG2234"
/codon_start=1
/transl_table=11
/product="alkaline phosphatase"
/protein_id="NP_708558.1"
/db_xref="GeneID:1027424"
/translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIA
AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGIDDNAAGLGVMLELAERLKN
TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
EATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
LPLVKELAKAS"
misc_feature 2848717..2849751
/gene="iap"
/locus_tag="SF2776"
/note="alkaline phosphatase isozyme conversion
aminopeptidase; Provisional; Region: PRK10199"
/db_xref="CDD:182299"
gene complement(2849840..2850850)
/locus_tag="SF2777"
/db_xref="GeneID:1027445"
CDS complement(2849840..2850850)
/locus_tag="SF2777"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708559.1"
/db_xref="GeneID:1027445"
/translation="MGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKF
ARSFQQLYLPPEFKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLR
RVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPRIEIPTFWDDD
EGVELIKQLSWYISATVVLADWTGSSTRFFPRVAQAMDIEDYWQKALVQAQNALTVFP
PQAETAPFTGINTLFPFIENTTPLQQKVLDLDINQPGPQLFILEDVTGAGKTEAALIL
AHRLMAAGNAQGLFFGLPTMATANAMYDRLVKTWLAFYSPEVFPAPAEINRRNTVRFS
RK"
misc_feature complement(<2849933..2850763)
/locus_tag="SF2777"
/note="N-terminal helicase domain of the DEAD-box helicase
superfamily; Region: DEAD-like_helicase_N; cl28899"
/db_xref="CDD:475120"
gene complement(2851185..2851337)
/locus_tag="SF2777a"
/db_xref="GeneID:16608352"
CDS complement(2851185..2851337)
/locus_tag="SF2777a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439275.1"
/db_xref="GeneID:16608352"
/translation="MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVL
AYESKK"
misc_feature complement(2851200..2851322)
/locus_tag="SF2777a"
/note="Hok/gef family; Region: HOK_GEF; cl27487"
/db_xref="CDD:452751"
gene complement(2851601..2852335)
/gene="cysH"
/locus_tag="SF2778"
/db_xref="GeneID:1027439"
CDS complement(2851601..2852335)
/gene="cysH"
/locus_tag="SF2778"
/note="Code: EH; COG: COG0175"
/codon_start=1
/transl_table=11
/product="phosphoadenosine phosphosulfate reductase"
/protein_id="NP_708560.2"
/db_xref="GeneID:1027439"
/translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
PGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
RKWEPGMAEEETRFFGLKRECGLHEG"
misc_feature complement(2851604..2852320)
/gene="cysH"
/locus_tag="SF2778"
/note="phosphoadenylyl-sulfate reductase; Region:
PRK02090"
/db_xref="CDD:234997"
gene complement(2852409..2854121)
/gene="cysI"
/locus_tag="SF2779"
/db_xref="GeneID:1027406"
CDS complement(2852409..2854121)
/gene="cysI"
/locus_tag="SF2779"
/note="Code: P; COG: COG0155"
/codon_start=1
/transl_table=11
/product="sulfite reductase subunit beta"
/protein_id="NP_708561.1"
/db_xref="GeneID:1027406"
/translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKF
AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
LPSFIDNIDNLMVKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
DLWD"
misc_feature complement(2852415..2854109)
/gene="cysI"
/locus_tag="SF2779"
/note="NADPH-dependent assimilatory sulfite reductase
hemoprotein subunit; Region: PRK13504"
/db_xref="CDD:237402"
gene complement(2854121..2855920)
/gene="cysJ"
/locus_tag="SF2780"
/db_xref="GeneID:1027405"
CDS complement(2854121..2855920)
/gene="cysJ"
/locus_tag="SF2780"
/note="Code: P; COG: COG0369"
/codon_start=1
/transl_table=11
/product="sulfite reductase subunit alpha"
/protein_id="NP_708562.1"
/db_xref="GeneID:1027405"
/translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL
NQQPVALAVTPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
FCQSGKDFDSKLAELGGERLLDRVDSDVEYQAAASEWRARVVDALKSRAPVAAPSQSV
ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
GVWYQNDPALVKELVELLWLTGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
LTRSETLLPLVGDKAKLQHYAATTLIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
LETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKE
GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
LEVIAEFGGMDTEAADEFLSELRVERRYQRDVY"
misc_feature complement(2854124..2855920)
/gene="cysJ"
/locus_tag="SF2780"
/note="NADPH-dependent assimilatory sulfite reductase
flavoprotein subunit; Region: cysJ; PRK10953"
/db_xref="CDD:182862"
misc_feature complement(order(2854655..2854666,2854703..2854705,
2854709..2854711,2854754..2854765,2855096..2855098))
/gene="cysJ"
/locus_tag="SF2780"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99796"
misc_feature complement(order(2854754..2854759,2854763..2854765))
/gene="cysJ"
/locus_tag="SF2780"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99796"
misc_feature complement(order(2854124..2854126,2854130..2854132,
2854265..2854267,2854754..2854756))
/gene="cysJ"
/locus_tag="SF2780"
/note="catalytic residues [active]"
/db_xref="CDD:99796"
misc_feature complement(order(2854247..2854249,2854334..2854336,
2854340..2854342,2854361..2854366,2854451..2854456,
2854535..2854537,2854541..2854543,2854694..2854705))
/gene="cysJ"
/locus_tag="SF2780"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99796"
misc_feature complement(order(2854646..2854648,2854655..2854657,
2854664..2854666))
/gene="cysJ"
/locus_tag="SF2780"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99796"
misc_feature complement(order(2854523..2854525,2854529..2854540,
2854550..2854552))
/gene="cysJ"
/locus_tag="SF2780"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99796"
gene 2856239..2856601
/gene="ygcM"
/locus_tag="SF2781"
/db_xref="GeneID:1025773"
CDS 2856239..2856601
/gene="ygcM"
/locus_tag="SF2781"
/note="Code: H; COG: COG0720"
/codon_start=1
/transl_table=11
/product="6-carboxytetrahydropterin synthase QueD"
/protein_id="NP_708563.2"
/db_xref="GeneID:1025773"
/translation="MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
DPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLL
SAVMVKETCTAGCIYRGE"
misc_feature 2856242..2856598
/gene="ygcM"
/locus_tag="SF2781"
/note="Tunnelling fold (T-fold). The five known T-folds
are found in five different enzymes with different
functions: dihydroneopterin-triphosphate epimerase
(DHNTPE), dihydroneopterin aldolase (DHNA), GTP
cyclohydrolase I (GTPCH-1), 6-pyrovoyl...; Region: TFold;
cl00263"
/db_xref="CDD:469697"
misc_feature order(2856326..2856328,2856332..2856334,2856563..2856565,
2856581..2856583)
/gene="ygcM"
/locus_tag="SF2781"
/note="active site"
/db_xref="CDD:238351"
gene 2856649..2857950
/gene="ygcN"
/locus_tag="SF2782"
/db_xref="GeneID:1025764"
CDS 2856649..2857950
/gene="ygcN"
/locus_tag="SF2782"
/note="Code: C; COG: COG0644"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708564.1"
/db_xref="GeneID:1025764"
/translation="MLCSGYLGHDMEDDCDIIIIGAGIAGTACALRCARADLSVLLLE
RAEIPGSKNLSGRRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQP
GGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYV
VLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSG
GICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRTLIKNTE
SLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQ
TLISACQHREPQNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGRYRAWPALMQDIS
RDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL"
misc_feature 2856736..2857947
/gene="ygcN"
/locus_tag="SF2782"
/note="oxidoreductase; Provisional; Region: PRK10015"
/db_xref="CDD:182194"
gene 2857905..2858201
/gene="ygcO"
/locus_tag="SF2783"
/db_xref="GeneID:1025769"
CDS 2857905..2858201
/gene="ygcO"
/locus_tag="SF2783"
/note="Code: C; COG: COG2440"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708565.2"
/db_xref="GeneID:1025769"
/translation="MASGGRCYQESAMSVARNLWRVADAPHIVPADSVERQMVQRLIN
ACPVGLFSLTQEGDLRIDYRGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG"
misc_feature <2857974..2858198
/gene="ygcO"
/locus_tag="SF2783"
/note="4Fe-4S dicluster domain; Region: Fer4_8; cl19102"
/db_xref="CDD:473136"
gene 2858218..2858793
/gene="ygcP"
/locus_tag="SF2784"
/pseudo
/db_xref="GeneID:1027408"
misc_feature 2858218..2858793
/gene="ygcP"
/locus_tag="SF2784"
/note="Similar to Escherichia coli K12 anti-terminator
regulatory protein gi: 1789127 (192 aa). BLAST with
identity of 96% in 192 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2858941..2859834)
/gene="ygcQ"
/locus_tag="SF2785"
/db_xref="GeneID:1026925"
CDS complement(2858941..2859834)
/gene="ygcQ"
/locus_tag="SF2785"
/note="Code: C; COG: COG2025"
/codon_start=1
/transl_table=11
/product="flavoprotein"
/protein_id="NP_708566.1"
/db_xref="GeneID:1026925"
/translation="MAGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQ
IEPQPVVAEQVLDAMVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLD
IPTVSMRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPD
WLVSTEDLKNVSRDPLAEARRVLVVGQGGEADNQEIVMLAEKLGAEVGYSRARVMNGG
VDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFMVAINHDASAAVFSQADIG
VVDDWKVVLEALVTNIHAEYQ"
misc_feature complement(2858971..>2859681)
/gene="ygcQ"
/locus_tag="SF2785"
/note="Electron transfer flavoprotein, alpha subunit FixB
[Energy production and conversion]; Region: FixB; COG2025"
/db_xref="CDD:441628"
gene complement(2859798..2860577)
/gene="ygcR"
/locus_tag="SF2786"
/db_xref="GeneID:1026917"
CDS complement(2859798..2860577)
/gene="ygcR"
/locus_tag="SF2786"
/note="Code: C; COG: COG2086"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708567.2"
/db_xref="GeneID:1026917"
/translation="MNILLAFKAEPDAGMLAEKEWQAAAQGNSGPDVSLLRSLLGADE
QAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPE
FVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFI
TLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPA
MQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP"
misc_feature complement(2859936..2860577)
/gene="ygcR"
/locus_tag="SF2786"
/note="Adenine nucleotide alpha hydrolase (AANH)
superfamily; Region: AANH_superfamily; cl00292"
/db_xref="CDD:469708"
gene complement(2860555..2861964)
/gene="ygcS"
/locus_tag="SF2787"
/db_xref="GeneID:1024296"
CDS complement(2860555..2861964)
/gene="ygcS"
/locus_tag="SF2787"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708568.1"
/db_xref="GeneID:1024296"
/translation="MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRI
ATLTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWIS
DHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFS
PRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWG
TPESPRWLLCQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFN
SVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHR
KFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIR
SLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKA
LPLVAAGNVGGANEHSVSV"
misc_feature complement(2860636..2861832)
/gene="ygcS"
/locus_tag="SF2787"
/note="Metazoan Synaptic vesicle glycoprotein 2 (SV2) and
related small molecule transporters of the Major
Facilitator Superfamily; Region: MFS_SV2_like; cd17316"
/db_xref="CDD:340874"
misc_feature complement(order(2860744..2860746,2860753..2860758,
2860765..2860770,2860777..2860779,2860825..2860827,
2860837..2860839,2860849..2860854,2861002..2861004,
2861014..2861016,2861089..2861091,2861098..2861106,
2861113..2861118,2861125..2861127,2861425..2861427,
2861434..2861439,2861446..2861448,2861506..2861508,
2861515..2861523,2861527..2861532,2861680..2861682,
2861776..2861778,2861785..2861790,2861797..2861802))
/gene="ygcS"
/locus_tag="SF2787"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340874"
mobile_element 2862840..2863607
/mobile_element_type="insertion sequence:IS1"
gene 2863089..2863592
/gene="insB"
/locus_tag="SF2789"
/db_xref="GeneID:1025765"
CDS 2863089..2863592
/gene="insB"
/locus_tag="SF2789"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708570.1"
/db_xref="GeneID:1025765"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 2863197..2863589
/gene="insB"
/locus_tag="SF2789"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(2863631..2864302)
/gene="ygcF"
/locus_tag="SF2790"
/db_xref="GeneID:1026921"
CDS complement(2863631..2864302)
/gene="ygcF"
/locus_tag="SF2790"
/note="Code: O; COG: COG0602"
/codon_start=1
/transl_table=11
/product="7-carboxy-7-deazaguanine synthase QueE"
/protein_id="NP_708571.1"
/db_xref="GeneID:1026921"
/translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKH
PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
YLNIA"
misc_feature complement(2863634..2864278)
/gene="ygcF"
/locus_tag="SF2790"
/note="putative 7-cyano-7-deazaguanosine (preQ0)
biosynthesis protein QueE; Region: rSAM_QueE_Ecoli;
TIGR04322"
/db_xref="CDD:275126"
misc_feature complement(order(2863730..2863735,2863895..2863897,
2863943..2863951,2864018..2864023,2864027..2864029,
2864135..2864137,2864189..2864194,2864198..2864200,
2864204..2864206,2864210..2864212))
/gene="ygcF"
/locus_tag="SF2790"
/note="FeS/SAM binding site [active]"
/db_xref="CDD:100105"
mobile_element 2864641..2865408
/mobile_element_type="insertion sequence:IS1"
gene 2864696..2864971
/gene="insA"
/locus_tag="SF2791"
/db_xref="GeneID:1027411"
CDS 2864696..2864971
/gene="insA"
/locus_tag="SF2791"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708572.1"
/db_xref="GeneID:1027411"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2864717..>2864968
/gene="insA"
/locus_tag="SF2791"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 2864998..2865393
/gene="insB"
/locus_tag="SF2792"
/db_xref="GeneID:1025762"
CDS 2864998..2865393
/gene="insB"
/locus_tag="SF2792"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708573.1"
/db_xref="GeneID:1025762"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 2865001..2865390
/gene="insB"
/locus_tag="SF2792"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 2865395..2866280
/gene="ygcG"
/locus_tag="SF2793"
/pseudogene="unknown"
/db_xref="GeneID:1027410"
gene complement(2866264..2867562)
/gene="eno"
/locus_tag="SF2794"
/db_xref="GeneID:1027407"
CDS complement(2866264..2867562)
/gene="eno"
/locus_tag="SF2794"
/note="Code: G; COG: COG0148"
/codon_start=1
/transl_table=11
/product="enolase"
/protein_id="NP_708575.1"
/db_xref="GeneID:1027407"
/translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
misc_feature complement(2866273..2867562)
/gene="eno"
/locus_tag="SF2794"
/note="Enolase [Carbohydrate transport and metabolism];
Region: Eno; COG0148"
/db_xref="CDD:439918"
gene complement(2867650..2869287)
/gene="pyrG"
/locus_tag="SF2795"
/db_xref="GeneID:1025760"
CDS complement(2867650..2869287)
/gene="pyrG"
/locus_tag="SF2795"
/note="Code: F; COG: COG0504"
/codon_start=1
/transl_table=11
/product="CTP synthetase"
/protein_id="NP_708576.1"
/db_xref="GeneID:1025760"
/translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
misc_feature complement(2867659..2869281)
/gene="pyrG"
/locus_tag="SF2795"
/note="CTP synthetase; Validated; Region: pyrG; PRK05380"
/db_xref="CDD:235437"
gene complement(2869515..2870306)
/gene="mazG"
/locus_tag="SF2796"
/db_xref="GeneID:1026923"
CDS complement(2869515..2870306)
/gene="mazG"
/locus_tag="SF2796"
/note="Code: R; COG: COG1694"
/codon_start=1
/transl_table=11
/product="nucleoside triphosphate pyrophosphohydrolase"
/protein_id="NP_708577.1"
/db_xref="GeneID:1026923"
/translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
VNEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
misc_feature complement(2869521..2870306)
/gene="mazG"
/locus_tag="SF2796"
/note="nucleoside triphosphate pyrophosphohydrolase;
Reviewed; Region: mazG; PRK09562"
/db_xref="CDD:236569"
gene complement(2870402..2872636)
/gene="relA"
/locus_tag="SF2797"
/db_xref="GeneID:1027604"
CDS complement(2870402..2872636)
/gene="relA"
/locus_tag="SF2797"
/note="Code: TK; COG: COG0317"
/codon_start=1
/transl_table=11
/product="(p)ppGpp synthetase I/GTP pyrophosphokinase"
/protein_id="NP_708578.1"
/db_xref="GeneID:1027604"
/translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ
QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
LHGS"
misc_feature complement(2870408..2872636)
/gene="relA"
/locus_tag="SF2797"
/note="(p)ppGpp synthetase I/GTP pyrophosphokinase;
Provisional; Region: relA; PRK10872"
/db_xref="CDD:182797"
gene complement(2872684..2873985)
/gene="rumA"
/locus_tag="SF2798"
/db_xref="GeneID:1025761"
CDS complement(2872684..2873985)
/gene="rumA"
/locus_tag="SF2798"
/note="Code: J; COG: COG2265"
/codon_start=1
/transl_table=11
/product="23S rRNA (uracil(1939)-C(5))-methyltransferase
RlmD"
/protein_id="NP_708579.1"
/db_xref="GeneID:1025761"
/translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL
LPQENAEVAVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
SKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
QCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK
LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
RALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ
NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
misc_feature complement(2872693..2873982)
/gene="rumA"
/locus_tag="SF2798"
/note="23S rRNA (uracil(1939)-C(5))-methyltransferase
RlmD; Region: rumA; PRK13168"
/db_xref="CDD:237291"
gene 2874042..2876798
/gene="barA"
/locus_tag="SF2799"
/db_xref="GeneID:1026816"
CDS 2874042..2876798
/gene="barA"
/locus_tag="SF2799"
/codon_start=1
/transl_table=11
/product="hybrid sensory histidine kinase BarA"
/protein_id="NP_708580.1"
/db_xref="GeneID:1026816"
/translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
ALELDLKSVRLQQYKEIFISCVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
GSTFWFHINLDLNPNIIIEGPSIQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQR
QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLAGENPEGL
VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
KILG"
misc_feature 2874042..2876795
/gene="barA"
/locus_tag="SF2799"
/note="hybrid sensory histidine kinase BarA; Provisional;
Region: PRK11107"
/db_xref="CDD:236848"
gene complement(2877030..2878370)
/gene="ygcX"
/locus_tag="SF2800"
/db_xref="GeneID:1027402"
CDS complement(2877030..2878370)
/gene="ygcX"
/locus_tag="SF2800"
/note="Code: H; COG: COG1441"
/codon_start=1
/transl_table=11
/product="glucarate dehydratase"
/protein_id="NP_708581.1"
/db_xref="GeneID:1027402"
/translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIK
DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDASGRGLQ
TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKAT
PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
SIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
PEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR"
misc_feature complement(2877033..2878358)
/gene="ygcX"
/locus_tag="SF2800"
/note="glucarate dehydratase; Region: glucar-dehydr;
TIGR03247"
/db_xref="CDD:211799"
gene complement(2878391..2879731)
/gene="ygcY"
/locus_tag="SF2801"
/db_xref="GeneID:1025794"
CDS complement(2878391..2879731)
/gene="ygcY"
/locus_tag="SF2801"
/note="Code: H; COG: COG1441"
/codon_start=1
/transl_table=11
/product="glucarate dehydratase"
/protein_id="NP_708582.2"
/db_xref="GeneID:1025794"
/translation="MATQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
WTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
LPYLENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
VRALKKSFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE
FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
WGCHSNNHFDISLAIFTHVGAAAPGNPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVP
DAPGLGVELDWEQVQKAHEAYKRLPCGARNDAGPMQYLIPGWTFDRKRPVFGRH"
misc_feature complement(2878397..2879719)
/gene="ygcY"
/locus_tag="SF2801"
/note="glucarate dehydratase; Region: glucar-dehydr;
TIGR03247"
/db_xref="CDD:211799"
gene complement(2879733..2881100)
/locus_tag="SF2802"
/db_xref="GeneID:1025797"
CDS complement(2879733..2881100)
/locus_tag="SF2802"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708583.1"
/db_xref="GeneID:1025797"
/translation="MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGS
EMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSIFIWSM
FTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPVQERGTAVSIF
NSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQK
ELEYIAAGGALINMDQQSTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFF
ITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTP
IVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGG
LFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELK
PVAGQ"
misc_feature complement(2879778..2881022)
/locus_tag="SF2802"
/note="D-galactonate transporter; Region: 2A0114;
TIGR00893"
/db_xref="CDD:273326"
gene complement(2881534..2881983)
/locus_tag="SF2803"
/db_xref="GeneID:1025796"
CDS complement(2881534..2881983)
/locus_tag="SF2803"
/note="Code: C; COG: COG0716"
/codon_start=1
/transl_table=11
/product="flavodoxin"
/protein_id="NP_708584.1"
/db_xref="GeneID:1025796"
/translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS"
misc_feature complement(2881537..2881983)
/locus_tag="SF2803"
/note="flavodoxin; Provisional; Region: PRK08105"
/db_xref="CDD:181230"
gene complement(2882001..2882783)
/gene="yqcB"
/locus_tag="SF2804"
/db_xref="GeneID:1026915"
CDS complement(2882001..2882783)
/gene="yqcB"
/locus_tag="SF2804"
/note="Code: J; COG: COG0564"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase C"
/protein_id="NP_708585.1"
/db_xref="GeneID:1026915"
/translation="MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIG
QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
misc_feature complement(2882019..2882783)
/gene="yqcB"
/locus_tag="SF2804"
/note="tRNA pseudouridine synthase C; Provisional; Region:
PRK11112"
/db_xref="CDD:182971"
misc_feature complement(order(2882289..2882291,2882622..2882633))
/gene="yqcB"
/locus_tag="SF2804"
/note="probable active site [active]"
/db_xref="CDD:211333"
gene complement(2882783..2883112)
/locus_tag="SF2805"
/db_xref="GeneID:1025781"
CDS complement(2882783..2883112)
/locus_tag="SF2805"
/note="Code: S; COG: COG3098"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708586.1"
/db_xref="GeneID:1025781"
/translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
MEPLEWLQWGLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDA
LFADDAS"
misc_feature complement(2882786..2883112)
/locus_tag="SF2805"
/note="Uncharacterized conserved protein YqcC, DUF446
family [Function unknown]; Region: YqcC; COG3098"
/db_xref="CDD:442332"
gene complement(2883155..2883523)
/gene="csrB"
/locus_tag="SF4558"
/db_xref="GeneID:1025776"
ncRNA complement(2883155..2883523)
/ncRNA_class="other"
/gene="csrB"
/locus_tag="SF4558"
/product="CsrB RNA; inhibitor of CsrA"
/db_xref="GeneID:1025776"
gene complement(2883734..2884279)
/gene="syd"
/locus_tag="SF2806"
/db_xref="GeneID:1026928"
CDS complement(2883734..2884279)
/gene="syd"
/locus_tag="SF2806"
/codon_start=1
/transl_table=11
/product="SecY interacting protein Syd"
/protein_id="NP_708587.1"
/db_xref="GeneID:1026928"
/translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
RKRTNLASNLAEFLNQLKPLL"
misc_feature complement(2883737..2884267)
/gene="syd"
/locus_tag="SF2806"
/note="SecY interacting protein Syd; Provisional; Region:
PRK04968"
/db_xref="CDD:235324"
gene 2884347..2885195
/gene="queF"
/locus_tag="SF2807"
/db_xref="GeneID:1025777"
CDS 2884347..2885195
/gene="queF"
/locus_tag="SF2807"
/codon_start=1
/transl_table=11
/product="7-cyano-7-deazaguanine reductase"
/protein_id="NP_708588.1"
/db_xref="GeneID:1025777"
/translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
EFTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
TRLVRQ"
misc_feature 2884371..2885192
/gene="queF"
/locus_tag="SF2807"
/note="7-cyano-7-deazaguanine reductase; Provisional;
Region: queF; PRK11792"
/db_xref="CDD:236986"
gene 2885307..2886671
/gene="ygdH"
/locus_tag="SF2808"
/db_xref="GeneID:1024184"
CDS 2885307..2886671
/gene="ygdH"
/locus_tag="SF2808"
/note="Code: R; COG: COG1611"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708589.1"
/db_xref="GeneID:1024184"
/translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
EICT"
misc_feature 2885310..2886662
/gene="ygdH"
/locus_tag="SF2808"
/note="nucleotide 5'-monophosphate nucleosidase PpnN;
Region: Nsidase_PpnN; NF038390"
/db_xref="CDD:468501"
mobile_element 2886688..2888115
/mobile_element_type="insertion sequence:IS4"
gene 2886755..2888101
/locus_tag="SF2809"
/db_xref="GeneID:1025785"
CDS 2886755..2888101
/locus_tag="SF2809"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_708590.1"
/db_xref="GeneID:1025785"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNAWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMSDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature 2886845..2887843
/locus_tag="SF2809"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene 2888665..2889954
/gene="sdaC"
/locus_tag="SF2810"
/db_xref="GeneID:1025784"
CDS 2888665..2889954
/gene="sdaC"
/locus_tag="SF2810"
/note="Code: E; COG: COG0814"
/codon_start=1
/transl_table=11
/product="serine transporter"
/protein_id="NP_708591.1"
/db_xref="GeneID:1025784"
/translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
VFSFNHSPIISSFAVANREEYGDMAEQKCSKILAFAHIMMVLTEMIFVFICVLSLTPA
DLAAAKEHNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
misc_feature 2888716..2889918
/gene="sdaC"
/locus_tag="SF2810"
/note="serine transporter; Region: stp; TIGR00814"
/db_xref="CDD:273283"
gene 2890012..2891379
/gene="sdaB"
/locus_tag="SF2811"
/db_xref="GeneID:1025786"
CDS 2890012..2891379
/gene="sdaB"
/locus_tag="SF2811"
/note="Code: E; COG: COG1760"
/codon_start=1
/transl_table=11
/product="L-serine dehydratase"
/protein_id="NP_708592.1"
/db_xref="GeneID:1025786"
/translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
IVACD"
misc_feature 2890015..2891364
/gene="sdaB"
/locus_tag="SF2811"
/note="L-serine dehydratase, iron-sulfur-dependent, single
chain form; Region: sda_mono; TIGR00720"
/db_xref="CDD:273233"
gene 2891400..2892245
/gene="xni"
/locus_tag="SF2812"
/db_xref="GeneID:1025780"
CDS 2891400..2892245
/gene="xni"
/locus_tag="SF2812"
/note="Code: L; COG: COG0258"
/codon_start=1
/transl_table=11
/product="flap endonuclease-like protein"
/protein_id="NP_708593.1"
/db_xref="GeneID:1025780"
/translation="MRSLFLFSQPAIACSGIECYPYRLIFKGVIVAVHLLIVDALNLI
RRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKADRPP
MPEELHDEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGY
CQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPK
SATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQ
LRLVR"
misc_feature 2891490..2892242
/gene="xni"
/locus_tag="SF2812"
/note="flap endonuclease-like protein; Provisional;
Region: PRK09482"
/db_xref="CDD:181896"
gene complement(2892298..2893446)
/gene="fucO"
/locus_tag="SF2813"
/db_xref="GeneID:1026920"
CDS complement(2892298..2893446)
/gene="fucO"
/locus_tag="SF2813"
/note="Code: C; COG: COG1454"
/codon_start=1
/transl_table=11
/product="L-1,2-propanediol oxidoreductase"
/protein_id="NP_708594.2"
/db_xref="GeneID:1026920"
/translation="MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQC
GVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDT
CKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR
KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHI
KAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPH
GVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEGARNAAVEAVFALNRDVG
IPPHLRDVGVRKEDISALAQAALDDVCTGGNPREATLEDIVELYHTAW"
misc_feature complement(2892301..2893446)
/gene="fucO"
/locus_tag="SF2813"
/note="L-1,2-propanediol oxidoreductase; Provisional;
Region: PRK10624"
/db_xref="CDD:182595"
misc_feature complement(order(2892715..2892717,2892802..2892804,
2892931..2892933,2893408..2893422))
/gene="fucO"
/locus_tag="SF2813"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:341455"
misc_feature complement(order(2892619..2892621,2892661..2892663,
2892850..2892852,2892862..2892864,2892883..2892885,
2892907..2892909,2892964..2892966,2892991..2892993,
2893018..2893020,2893027..2893032,2893153..2893161,
2893333..2893335))
/gene="fucO"
/locus_tag="SF2813"
/note="active site"
/db_xref="CDD:341455"
misc_feature complement(order(2892619..2892621,2892661..2892663,
2892850..2892852,2892862..2892864))
/gene="fucO"
/locus_tag="SF2813"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:341455"
gene complement(2893474..2894121)
/gene="fucA"
/locus_tag="SF2814"
/db_xref="GeneID:1025774"
CDS complement(2893474..2894121)
/gene="fucA"
/locus_tag="SF2814"
/note="Code: G; COG: COG0235"
/codon_start=1
/transl_table=11
/product="L-fuculose phosphate aldolase"
/protein_id="NP_708595.1"
/db_xref="GeneID:1025774"
/translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
IPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
ILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIAC
EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
misc_feature complement(2893477..2894121)
/gene="fucA"
/locus_tag="SF2814"
/note="L-fuculose-phosphate aldolase; Region: PRK08087"
/db_xref="CDD:181226"
misc_feature complement(order(2893513..2893515,2893573..2893575,
2893594..2893596,2893606..2893608,2893627..2893629,
2893660..2893662,2893738..2893740,2893780..2893785,
2893789..2893791,2893810..2893818,2893831..2893836,
2893840..2893842,2893975..2893980,2893984..2893986,
2894050..2894052,2894074..2894076,2894086..2894088))
/gene="fucA"
/locus_tag="SF2814"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:238232"
misc_feature complement(order(2893657..2893659,2893840..2893842,
2893846..2893848,2893903..2893911,2893990..2893995,
2894035..2894037))
/gene="fucA"
/locus_tag="SF2814"
/note="active site"
/db_xref="CDD:238232"
misc_feature complement(order(2893657..2893659,2893840..2893842,
2893846..2893848))
/gene="fucA"
/locus_tag="SF2814"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:238232"
gene 2894668..2895984
/gene="fucP"
/locus_tag="SF2815"
/db_xref="GeneID:1025782"
CDS 2894668..2895984
/gene="fucP"
/locus_tag="SF2815"
/note="Code: G; COG: COG0738"
/codon_start=1
/transl_table=11
/product="L-fucose transporter"
/protein_id="NP_708596.1"
/db_xref="GeneID:1025782"
/translation="MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNL
NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA
LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSSHFRLNLAQT
FNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAI
VLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA
CWSYLIRYAVEEILGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI
AMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTII
GGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQTATN"
misc_feature 2894668..2895981
/gene="fucP"
/locus_tag="SF2815"
/note="L-fucose:H+ symporter permease; Region: PRK10133"
/db_xref="CDD:182260"
misc_feature order(2894758..2894760,2894767..2894772,2894779..2894781,
2894791..2894793,2894947..2894949,2894959..2894961,
2895067..2895072,2895079..2895084,2895142..2895144,
2895151..2895153,2895331..2895333,2895343..2895345)
/gene="fucP"
/locus_tag="SF2815"
/note="chemical substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:340952"
gene 2896017..2897792
/gene="fucI"
/locus_tag="SF2816"
/db_xref="GeneID:1027300"
CDS 2896017..2897792
/gene="fucI"
/locus_tag="SF2816"
/note="Code: G; COG: COG2407"
/codon_start=1
/transl_table=11
/product="L-fucose isomerase"
/protein_id="NP_708597.1"
/db_xref="GeneID:1027300"
/translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF
LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
WAAHGMDIEGQDYRACQNYGPLYKR"
misc_feature 2896023..2897786
/gene="fucI"
/locus_tag="SF2816"
/note="L-fucose isomerase; Provisional; Region: fucI;
PRK10991"
/db_xref="CDD:182885"
gene 2897871..2899320
/gene="fucK"
/locus_tag="SF2817"
/pseudo
/db_xref="GeneID:1026919"
misc_feature 2897871..2899320
/gene="fucK"
/locus_tag="SF2817"
/note="Similar to Escherichia coli K12 L-fuculokinase gi:
1789168 (483 aa). BLAST with identity of 98% in 483 aa.
This CDS contains an in-frame stop codon. The sequence has
been checked and is believed to be correct."
/pseudo
gene 2899322..2899744
/gene="fucU"
/locus_tag="SF2818"
/db_xref="GeneID:1025775"
CDS 2899322..2899744
/gene="fucU"
/locus_tag="SF2818"
/note="Code: G; COG: COG1869"
/codon_start=1
/transl_table=11
/product="L-fucose mutarotase"
/protein_id="NP_708598.1"
/db_xref="GeneID:1025775"
/translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMEPQVIR
ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
misc_feature 2899322..2899741
/gene="fucU"
/locus_tag="SF2818"
/note="L-fucose mutarotase; Provisional; Region: fucU;
PRK15420"
/db_xref="CDD:185318"
gene 2899802..2900533
/gene="fucR"
/locus_tag="SF2819"
/db_xref="GeneID:1025822"
CDS 2899802..2900533
/gene="fucR"
/locus_tag="SF2819"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator FucR"
/protein_id="NP_708599.2"
/db_xref="GeneID:1025822"
/translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
STCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQ
LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
RIGHLDEVTHIISDERQVATSLVTA"
misc_feature 2899802..2900521
/gene="fucR"
/locus_tag="SF2819"
/note="L-fucose operon activator; Region: PRK10411"
/db_xref="CDD:236684"
gene complement(2900577..2901677)
/gene="ygdE"
/locus_tag="SF2820"
/db_xref="GeneID:1026817"
CDS complement(2900577..2901677)
/gene="ygdE"
/locus_tag="SF2820"
/note="Code: R; COG: COG2933"
/codon_start=1
/transl_table=11
/product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
RlmM"
/protein_id="NP_708600.1"
/db_xref="GeneID:1026817"
/translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIY
ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
GYSYSNNNSPFYMGIPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
misc_feature complement(2900607..2901677)
/gene="ygdE"
/locus_tag="SF2820"
/note="putative 23S rRNA C2498 ribose 2'-O-ribose
methyltransferase; Provisional; Region: PRK11760"
/db_xref="CDD:236971"
gene complement(2901670..2902065)
/gene="ygdD"
/locus_tag="SF2821"
/db_xref="GeneID:1025771"
CDS complement(2901670..2902065)
/gene="ygdD"
/locus_tag="SF2821"
/note="Code: S; COG: COG2363"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708601.1"
/db_xref="GeneID:1025771"
/translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
misc_feature complement(2901673..2902065)
/gene="ygdD"
/locus_tag="SF2821"
/note="hypothetical protein; Provisional; Region:
PRK10873"
/db_xref="CDD:182798"
gene complement(2902084..2903001)
/gene="gcvA"
/locus_tag="SF2822"
/db_xref="GeneID:1025779"
CDS complement(2902084..2903001)
/gene="gcvA"
/locus_tag="SF2822"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator GcvA"
/protein_id="NP_708602.1"
/db_xref="GeneID:1025779"
/translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGFNHINVQQGP
IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
misc_feature complement(2902111..2903001)
/gene="gcvA"
/locus_tag="SF2822"
/note="DNA-binding transcriptional activator GcvA;
Provisional; Region: PRK11139"
/db_xref="CDD:182990"
gene 2903130..2903242
/gene="gcvB"
/locus_tag="SF4559"
/db_xref="GeneID:1025778"
ncRNA 2903130..2903242
/ncRNA_class="other"
/gene="gcvB"
/locus_tag="SF4559"
/product="gcvB RNA; regulator"
/db_xref="GeneID:1025778"
gene complement(2903352..2903582)
/locus_tag="SF2823"
/db_xref="GeneID:1025804"
CDS complement(2903352..2903582)
/locus_tag="SF2823"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708603.1"
/db_xref="GeneID:1025804"
/translation="MMKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQT
DNDIGMISYKDANGNKQQINRTDVKEMVELEQ"
misc_feature complement(2903361..2903576)
/locus_tag="SF2823"
/note="Bacterial protein of unknown function (DUF903);
Region: DUF903; cl05512"
/db_xref="CDD:471259"
gene 2903771..2904976
/locus_tag="SF2824"
/db_xref="GeneID:1025809"
CDS 2903771..2904976
/locus_tag="SF2824"
/note="Code: E; COG: COG0520"
/codon_start=1
/transl_table=11
/product="cysteine sulfinate desulfinase"
/protein_id="NP_708604.2"
/db_xref="GeneID:1025809"
/translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
RPRVQPGDEIIVSVAEHHANLVHWLMVAQQTRAKVVKLPLNAQRLPDVDLLPELITPR
SRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGTVHFPADVQQLDIDFYAF
SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
AGVIGLSAALEWLADYDINQAESWSRSLATLAEEALAKRPGFRSFRCQDSSLLAFDFA
GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
DRALELLVD"
misc_feature 2903771..2904973
/locus_tag="SF2824"
/note="cysteine desulfurase CsdA; Region: PRK10874"
/db_xref="CDD:182799"
misc_feature order(2904038..2904043,2904050..2904052,2904125..2904127,
2904356..2904358,2904362..2904367,2904425..2904427,
2904431..2904436)
/locus_tag="SF2824"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99746"
misc_feature 2904434..2904436
/locus_tag="SF2824"
/note="catalytic residue [active]"
/db_xref="CDD:99746"
gene 2904976..2905419
/gene="ygdK"
/locus_tag="SF2825"
/db_xref="GeneID:1025808"
CDS 2904976..2905419
/gene="ygdK"
/locus_tag="SF2825"
/note="Code: R; COG: COG2166"
/codon_start=1
/transl_table=11
/product="CsdA-binding activator"
/protein_id="NP_708605.1"
/db_xref="GeneID:1025808"
/translation="MTNPQFAGHPFGTTVTAETLRNTFAPLSQWEDKYRQLIMLGKQL
PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGNSEGRIVRGLLAVLLTAVEGK
TAAELQAQSPLALFDELGLRAQLSASRSQGLNALSEAIIAATKQV"
misc_feature 2904976..2905416
/gene="ygdK"
/locus_tag="SF2825"
/note="cysteine desulfurase sulfur acceptor subunit CsdE;
Region: PRK15019"
/db_xref="CDD:184980"
gene complement(2905470..2906276)
/gene="ygdL"
/locus_tag="SF2826"
/db_xref="GeneID:1025803"
CDS complement(2905470..2906276)
/gene="ygdL"
/locus_tag="SF2826"
/note="Code: H; COG: COG1179"
/codon_start=1
/transl_table=11
/product="sulfur acceptor protein CsdL"
/protein_id="NP_708606.1"
/db_xref="GeneID:1025803"
/translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGT
VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
misc_feature complement(2905473..2906276)
/gene="ygdL"
/locus_tag="SF2826"
/note="sulfur acceptor protein CsdL; Provisional; Region:
PRK15116"
/db_xref="CDD:185071"
gene complement(2906514..2907611)
/gene="mltA"
/locus_tag="SF2827"
/db_xref="GeneID:1027401"
CDS complement(2906514..2907611)
/gene="mltA"
/locus_tag="SF2827"
/note="Code: M; COG: COG2821"
/codon_start=1
/transl_table=11
/product="murein transglycosylase A"
/protein_id="NP_708607.2"
/db_xref="GeneID:1027401"
/translation="MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLV
NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
LGDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
misc_feature complement(2906550..2907611)
/gene="mltA"
/locus_tag="SF2827"
/note="murein transglycosylase A; Provisional; Region:
mltA; PRK11162"
/db_xref="CDD:236866"
gene 2907820..2907896
/locus_tag="SF4504"
/db_xref="GeneID:3161832"
tRNA 2907820..2907896
/locus_tag="SF4504"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161832"
gene 2907930..2908006
/locus_tag="SF4505"
/db_xref="GeneID:3161827"
tRNA 2907930..2908006
/locus_tag="SF4505"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161827"
gene complement(2908081..2909424)
/locus_tag="SF2828"
/db_xref="GeneID:1025787"
CDS complement(2908081..2909424)
/locus_tag="SF2828"
/note="Code: M; COG: COG0860"
/codon_start=1
/transl_table=11
/product="amidase"
/protein_id="NP_708608.1"
/db_xref="GeneID:1025787"
/translation="MTDYASFAKVSGQISRLLVTQLRFLLLGRGMSGSNTAISRRRLL
QGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVV
VDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAP
VAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPI
VIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEEEGNMKVYMTRNEDIFIPL
QVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDL
IGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVL
KAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG"
misc_feature complement(2908111..2909334)
/locus_tag="SF2828"
/note="N-acetylmuramoyl-L-alanine amidase AmiC; Region:
amidase_AmiC; NF038267"
/db_xref="CDD:468440"
gene 2909566..2910897
/gene="argA"
/locus_tag="SF2829"
/db_xref="GeneID:1025049"
CDS 2909566..2910897
/gene="argA"
/locus_tag="SF2829"
/note="Code: E; COG: COG0548"
/codon_start=1
/transl_table=11
/product="N-acetylglutamate synthase"
/protein_id="NP_708609.2"
/db_xref="GeneID:1025049"
/translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
LHRQLESGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS
GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
misc_feature 2909566..2910891
/gene="argA"
/locus_tag="SF2829"
/note="N-acetylglutamate synthase; Validated; Region:
PRK05279"
/db_xref="CDD:235386"
gene complement(2910959..2912785)
/gene="recD"
/locus_tag="SF2830"
/db_xref="GeneID:1025813"
CDS complement(2910959..2912785)
/gene="recD"
/locus_tag="SF2830"
/note="Code: L; COG: COG0507"
/codon_start=1
/transl_table=11
/product="exonuclease V subunit alpha"
/protein_id="NP_708610.1"
/db_xref="GeneID:1025813"
/translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
DAGEGHVCLPLSRLENNEASNPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
CGDRLYLNRMWCNERTVARFFNEVNHTIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG
THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
misc_feature complement(2910962..2912779)
/gene="recD"
/locus_tag="SF2830"
/note="exodeoxyribonuclease V subunit alpha; Region: recD;
PRK10875"
/db_xref="CDD:236783"
gene complement(2912785..2916327)
/gene="recB"
/locus_tag="SF2831"
/db_xref="GeneID:1025812"
CDS complement(2912785..2916327)
/gene="recB"
/locus_tag="SF2831"
/note="Code: L; COG: COG1074"
/codon_start=1
/transl_table=11
/product="exonuclease V subunit beta"
/protein_id="NP_708611.2"
/db_xref="GeneID:1025812"
/translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
GGSAAFPRPLIVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEPPVIKAPPPDDETL
ASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEE
TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLLITRALAE
IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
PGMVNSVNKLFSQTDDTFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
ALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPESVDLAEVERLAED
LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
VQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSDRDKQVEMEFYLPISEP
LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDLHFGGVIYLFLRGV
DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
misc_feature complement(2912788..2916327)
/gene="recB"
/locus_tag="SF2831"
/note="exonuclease V subunit beta; Provisional; Region:
recB; PRK10876"
/db_xref="CDD:236784"
gene complement(2916320..2919208)
/gene="ptr"
/locus_tag="SF2832"
/db_xref="GeneID:1025819"
CDS complement(2916320..2919208)
/gene="ptr"
/locus_tag="SF2832"
/note="Code: O; COG: COG1025"
/codon_start=1
/transl_table=11
/product="protease3"
/protein_id="NP_708612.1"
/db_xref="GeneID:1025819"
/translation="MPRSTWFKALLLFVALWAPLSQAETGWQPIQETIRKSDKDNRQY
QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
PQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIP
DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQ
VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMINANGYTQRLPQLFQALLEGY
FSYTATEEQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVD
KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQ
AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
misc_feature complement(2916329..2919208)
/gene="ptr"
/locus_tag="SF2832"
/note="protease3; Provisional; Region: PRK15101"
/db_xref="CDD:185056"
gene complement(2919384..2922752)
/gene="recC"
/locus_tag="SF2833"
/db_xref="GeneID:1025810"
CDS complement(2919384..2922752)
/gene="recC"
/locus_tag="SF2833"
/note="Code: L; COG: COG1330"
/codon_start=1
/transl_table=11
/product="exonuclease V subunit gamma"
/protein_id="NP_708613.1"
/db_xref="GeneID:1025810"
/translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
LEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE
AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
FRDSENAGQLFNSDGEQDVGNSLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
LLAMLEEAPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD
DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS
ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE
RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
FHTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDI
WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
misc_feature complement(2919387..2922752)
/gene="recC"
/locus_tag="SF2833"
/note="exodeoxyribonuclease V subunit gamma; Region: recC;
PRK11069"
/db_xref="CDD:236835"
gene complement(2922765..2923115)
/gene="ppdC"
/locus_tag="SF2834"
/db_xref="GeneID:1025807"
CDS complement(2922765..2923115)
/gene="ppdC"
/locus_tag="SF2834"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708614.2"
/db_xref="GeneID:1025807"
/translation="MSASLKNQQGFSLPEVMVAMVLMVLMVLMVLMVMIVTALSGIQR
TSMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGG
REGEMTRLHCPNCQ"
misc_feature complement(2922768..2923115)
/gene="ppdC"
/locus_tag="SF2834"
/note="prepilin-type N-terminal cleavage/methylation
domain-containing protein; Region: PRK10332"
/db_xref="CDD:182384"
gene complement(2923100..2923465)
/gene="ygdB"
/locus_tag="SF2835"
/db_xref="GeneID:1025836"
CDS complement(2923100..2923465)
/gene="ygdB"
/locus_tag="SF2835"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708615.4"
/db_xref="GeneID:1025836"
/translation="MLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWG
KMHSWQTQPAVQCSQYAGTDAQVCLRLLADNEALLIAGYEGVSLWRTGEVIDGKIVFS
PRGWSDFCPLKEGALCQLP"
misc_feature complement(2923103..2923435)
/gene="ygdB"
/locus_tag="SF2835"
/note="DUF2509 family protein; Region: PRK11521"
/db_xref="CDD:183174"
gene complement(2923504..2924067)
/locus_tag="SF2835a"
/db_xref="GeneID:16608353"
CDS complement(2923504..2924067)
/locus_tag="SF2835a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439276.1"
/db_xref="GeneID:16608353"
/translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
LALEDEIWLRVFTVAKHLQRAGYCHGSCTGEGLEIVGQGDCIIVQWDANSNGIWDREP
VKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVL
TVNMRAASKSEPQTVVDASYSVTGFNL"
misc_feature complement(2923507..2924067)
/locus_tag="SF2835a"
/note="prepilin peptidase-dependent protein; Region:
PRK10557"
/db_xref="CDD:236714"
gene complement(2924058..2924528)
/gene="ppdA"
/locus_tag="SF2836"
/pseudo
/db_xref="GeneID:1025788"
misc_feature complement(2924058..2924528)
/gene="ppdA"
/locus_tag="SF2836"
/note="Similar to Escherichia coli K12 prepilin peptidase
dependent protein A gi: 1789190 (157 aa). BLAST with
identity of 99% in 156 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(2924722..2925516)
/gene="thyA"
/locus_tag="SF2837"
/db_xref="GeneID:1025814"
CDS complement(2924722..2925516)
/gene="thyA"
/locus_tag="SF2837"
/note="Code: F; COG: COG0207"
/codon_start=1
/transl_table=11
/product="thymidylate synthase"
/protein_id="NP_708616.1"
/db_xref="GeneID:1025814"
/translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGVKAPVAI"
misc_feature complement(2924725..2925516)
/gene="thyA"
/locus_tag="SF2837"
/note="Thymidylate synthase [Nucleotide transport and
metabolism]; Region: ThyA; COG0207"
/db_xref="CDD:439977"
gene complement(2925523..2926398)
/gene="lgt"
/locus_tag="SF2838"
/db_xref="GeneID:1025806"
CDS complement(2925523..2926398)
/gene="lgt"
/locus_tag="SF2838"
/note="Code: M; COG: COG0682"
/codon_start=1
/transl_table=11
/product="prolipoprotein diacylglyceryl transferase"
/protein_id="NP_708617.1"
/db_xref="GeneID:1025806"
/translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
MMVWAYRRSPQQHVS"
misc_feature complement(2925535..2926386)
/gene="lgt"
/locus_tag="SF2838"
/note="prolipoprotein diacylglyceryl transferase;
Reviewed; Region: PRK00052"
/db_xref="CDD:234599"
gene complement(2926549..2928795)
/gene="ptsP"
/locus_tag="SF2839"
/db_xref="GeneID:1025805"
CDS complement(2926549..2928795)
/gene="ptsP"
/locus_tag="SF2839"
/note="Code: T; COG: COG3605"
/codon_start=1
/transl_table=11
/product="fused phosphoenolpyruvate-protein
phosphotransferase PtsP/GAF domain containing protein"
/protein_id="NP_708618.1"
/db_xref="GeneID:1025805"
/translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
LAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGE
LLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
LGSCIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
GLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLEAQLATEVRHQVAAFMERRGM
GGLIRGGL"
misc_feature complement(2926555..2928795)
/gene="ptsP"
/locus_tag="SF2839"
/note="phosphoenolpyruvate--protein phosphotransferase;
Region: PRK11061"
/db_xref="CDD:182937"
gene complement(2928808..2929338)
/gene="ygdP"
/locus_tag="SF2840"
/db_xref="GeneID:1025838"
CDS complement(2928808..2929338)
/gene="ygdP"
/locus_tag="SF2840"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="RNA pyrophosphohydrolase"
/protein_id="NP_708619.1"
/db_xref="GeneID:1025838"
/translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
NTPKPQNASAYRRKRG"
misc_feature complement(2928871..2929338)
/gene="ygdP"
/locus_tag="SF2840"
/note="RNA pyrophosphohydrolase; Reviewed; Region:
PRK00714"
/db_xref="CDD:234820"
gene 2930023..2930712
/gene="mutH"
/locus_tag="SF2841"
/db_xref="GeneID:1024298"
CDS 2930023..2930712
/gene="mutH"
/locus_tag="SF2841"
/note="Code: L; COG: COG3066"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein"
/protein_id="NP_708620.1"
/db_xref="GeneID:1024298"
/translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALDGLVTPENL
KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVARLTG
NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEE
LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
SALLARHSLIQ"
misc_feature 2930047..2930697
/gene="mutH"
/locus_tag="SF2841"
/note="DNA mismatch repair protein; Provisional; Region:
PRK05070"
/db_xref="CDD:179923"
misc_feature order(2930152..2930160,2930164..2930169,2930176..2930181,
2930188..2930190,2930212..2930226,2930230..2930232,
2930251..2930253,2930257..2930262,2930266..2930268,
2930293..2930298,2930302..2930304,2930311..2930313,
2930368..2930370,2930407..2930409,2930542..2930550,
2930566..2930568,2930572..2930595,2930599..2930604,
2930641..2930643,2930656..2930658,2930662..2930667)
/gene="mutH"
/locus_tag="SF2841"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:411704"
misc_feature order(2930188..2930190,2930230..2930232,2930251..2930253,
2930257..2930259,2930368..2930370)
/gene="mutH"
/locus_tag="SF2841"
/note="active site"
/db_xref="CDD:411704"
gene 2930781..2931494
/locus_tag="SF2842"
/db_xref="GeneID:1025800"
CDS 2930781..2931494
/locus_tag="SF2842"
/note="Code: P; COG: COG0861"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708621.1"
/db_xref="GeneID:1025800"
/translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
RAHARRLGLAGAMVMRLALLASISWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
FFSIAVESLNLIRNKKNPL"
misc_feature 2930796..2931446
/locus_tag="SF2842"
/note="Tellurite resistance membrane protein TerC
[Inorganic ion transport and metabolism]; Region: TerC;
COG0861"
/db_xref="CDD:440622"
gene 2931632..2931850
/locus_tag="SF2843"
/db_xref="GeneID:1025801"
CDS 2931632..2931850
/locus_tag="SF2843"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708622.1"
/db_xref="GeneID:1025801"
/translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
DTGLVSYHDQQGNAMQINRDDVSQIIER"
misc_feature 2931635..2931847
/locus_tag="SF2843"
/note="Bacterial protein of unknown function (DUF903);
Region: DUF903; cl05512"
/db_xref="CDD:471259"
gene 2931958..2932998
/gene="tas"
/locus_tag="SF2844"
/db_xref="GeneID:1025802"
CDS 2931958..2932998
/gene="tas"
/locus_tag="SF2844"
/note="Code: C; COG: COG0667"
/codon_start=1
/transl_table=11
/product="aldo/keto reductase"
/protein_id="NP_708623.1"
/db_xref="GeneID:1025802"
/translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVG
LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAA
YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
EAVHQVYTYPAP"
misc_feature 2931958..2932995
/gene="tas"
/locus_tag="SF2844"
/note="putative aldo-keto reductase; Provisional; Region:
tas; PRK10625"
/db_xref="CDD:236727"
misc_feature order(2932012..2932020,2932033..2932035,2932099..2932101,
2932114..2932116,2932216..2932218,2932351..2932353,
2932492..2932497,2932570..2932572,2932654..2932674,
2932681..2932683,2932687..2932689,2932714..2932722,
2932822..2932824,2932873..2932887,2932897..2932899,
2932909..2932911)
/gene="tas"
/locus_tag="SF2844"
/note="active site"
/db_xref="CDD:381320"
misc_feature order(2932099..2932101,2932114..2932116,2932216..2932218,
2932351..2932353)
/gene="tas"
/locus_tag="SF2844"
/note="catalytic tetrad [active]"
/db_xref="CDD:381320"
gene complement(2933031..2934221)
/gene="ygeD"
/locus_tag="SF2845"
/db_xref="GeneID:1025795"
CDS complement(2933031..2934221)
/gene="ygeD"
/locus_tag="SF2845"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="lysophospholipid transporter LplT"
/protein_id="NP_708624.1"
/db_xref="GeneID:1025795"
/translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
FYPEWSQPILQMVFVGAYILLAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASAIAAILLGSVAGGVLAD
WHVLVALAACALAYGGAVVANIYIPKLAARPGQSWNLINMTRSFLNACTSLWCNGETR
FSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLV
TLETVSRCMPAGILIGVVVPIFSLQHELLPAYALLMLIGVLGGFFVVPLNALLQERGK
KSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWIW
QRRH"
misc_feature complement(2933034..2934188)
/gene="ygeD"
/locus_tag="SF2845"
/note="lysophospholipid transporter LplT; Provisional;
Region: PRK11195"
/db_xref="CDD:236879"
misc_feature complement(order(2933160..2933162,2933169..2933174,
2933181..2933186,2933193..2933195,2933244..2933246,
2933256..2933258,2933268..2933273,2933427..2933429,
2933439..2933441,2933514..2933516,2933523..2933531,
2933538..2933543,2933550..2933552,2933778..2933780,
2933787..2933792,2933799..2933801,2933859..2933861,
2933868..2933876,2933880..2933885,2934024..2934026,
2934120..2934122,2934129..2934134,2934141..2934146))
/gene="ygeD"
/locus_tag="SF2845"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340863"
gene complement(2934214..2936373)
/gene="aas"
/locus_tag="SF2846"
/db_xref="GeneID:1026818"
CDS complement(2934214..2936373)
/gene="aas"
/locus_tag="SF2846"
/note="Code: IQ; COG: COG0318"
/codon_start=1
/transl_table=11
/product="bifunctional acyl-[acyl carrier protein]
synthetase/2-acylglycerophosphoethanolamine
acyltransferase"
/protein_id="NP_708625.1"
/db_xref="GeneID:1026818"
/translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
TLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPDL
VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPEL
AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
misc_feature complement(2934220..2936373)
/gene="aas"
/locus_tag="SF2846"
/note="bifunctional acyl-ACP--phospholipid
O-acyltransferase/long-chain-fatty-acid--ACP ligase;
Region: PRK08043"
/db_xref="CDD:181207"
gene 2936959..2937990
/gene="galR"
/locus_tag="SF2847"
/db_xref="GeneID:1025799"
CDS 2936959..2937990
/gene="galR"
/locus_tag="SF2847"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator GalR"
/protein_id="NP_708626.1"
/db_xref="GeneID:1025799"
/translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIPANDRLVTFGE
PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
EASHHATSD"
misc_feature 2936959..2937987
/gene="galR"
/locus_tag="SF2847"
/note="HTH-type transcriptional regulator GalR; Region:
PRK10727"
/db_xref="CDD:182681"
gene complement(2937997..2939259)
/gene="lysA"
/locus_tag="SF2848"
/db_xref="GeneID:1025821"
CDS complement(2937997..2939259)
/gene="lysA"
/locus_tag="SF2848"
/note="Code: E; COG: COG0019"
/codon_start=1
/transl_table=11
/product="diaminopimelate decarboxylase"
/protein_id="NP_708627.1"
/db_xref="GeneID:1025821"
/translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
QFEVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
VIDQATLERVSELQIPVNAGSVDTLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
LQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLL
PEVLFDNGQARLIRRRQTIEELLALELL"
misc_feature complement(2938027..2939256)
/gene="lysA"
/locus_tag="SF2848"
/note="diaminopimelate decarboxylase; Region: lysA;
TIGR01048"
/db_xref="CDD:273415"
misc_feature complement(order(2938102..2938104,2938114..2938116,
2938126..2938128,2938234..2938236,2938327..2938329,
2938339..2938341,2938447..2938458,2938579..2938584,
2938678..2938680,2938687..2938689,2938693..2938695,
2938834..2938836,2938960..2938962,2939041..2939043,
2939098..2939100,2939104..2939106))
/gene="lysA"
/locus_tag="SF2848"
/note="active site"
/db_xref="CDD:143501"
misc_feature complement(order(2938126..2938128,2938234..2938236,
2938447..2938458,2938579..2938584,2938678..2938680,
2938687..2938689,2938693..2938695,2938834..2938836,
2938960..2938962,2939041..2939043,2939098..2939100,
2939104..2939106))
/gene="lysA"
/locus_tag="SF2848"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143501"
misc_feature complement(order(2938102..2938104,2938114..2938116,
2938126..2938128,2938231..2938236,2938327..2938329,
2938339..2938341,2938447..2938449,2938678..2938680,
2938687..2938689,2939098..2939100))
/gene="lysA"
/locus_tag="SF2848"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143501"
misc_feature complement(order(2938234..2938236,2939098..2939100))
/gene="lysA"
/locus_tag="SF2848"
/note="catalytic residues [active]"
/db_xref="CDD:143501"
misc_feature complement(order(2938087..2938089,2938096..2938107,
2938111..2938119,2938222..2938224,2938228..2938245,
2938369..2938371,2938375..2938377,2938396..2938398,
2938402..2938404,2938765..2938776,2938885..2938887,
2938894..2938896,2938936..2938938,2938948..2938956,
2939023..2939028,2939032..2939037,2939080..2939085))
/gene="lysA"
/locus_tag="SF2848"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143501"
gene 2939381..2940316
/gene="lysR"
/locus_tag="SF2849"
/db_xref="GeneID:1025828"
CDS 2939381..2940316
/gene="lysR"
/locus_tag="SF2849"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_708628.1"
/db_xref="GeneID:1025828"
/translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPTGTER
TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
RMIVETHSAASVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
RPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA"
misc_feature 2939381..2940307
/gene="lysR"
/locus_tag="SF2849"
/note="DNA-binding transcriptional regulator LysR;
Provisional; Region: PRK11013"
/db_xref="CDD:236819"
gene complement(2940303..2940995)
/gene="ygeA"
/locus_tag="SF2850"
/db_xref="GeneID:1025833"
CDS complement(2940303..2940995)
/gene="ygeA"
/locus_tag="SF2850"
/note="Code: M; COG: COG1794"
/codon_start=1
/transl_table=11
/product="racemase"
/protein_id="NP_708629.1"
/db_xref="GeneID:1025833"
/translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQMLLHSVD
FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
IHAEDAVAFMLS"
misc_feature complement(2940306..2940995)
/gene="ygeA"
/locus_tag="SF2850"
/note="putative racemase; Provisional; Region: PRK10200"
/db_xref="CDD:182300"
gene complement(2941124..2942542)
/gene="araE"
/locus_tag="SF2851"
/db_xref="GeneID:1025850"
CDS complement(2941124..2942542)
/gene="araE"
/locus_tag="SF2851"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="low-affinity L-arabinose transport system proton
symport protein"
/protein_id="NP_708630.2"
/db_xref="GeneID:1025850"
/translation="MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIA
GALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLG
SIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLG
IVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVL
RMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNI
IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVM
ALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKC
RDFGITCSTTTNWVSNMIIGAAFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETK
NVTLEHIERKLMAGEKLRNIGV"
misc_feature complement(2941172..2942527)
/gene="araE"
/locus_tag="SF2851"
/note="MFS transporter, sugar porter (SP) family; Region:
SP; TIGR00879"
/db_xref="CDD:273317"
misc_feature complement(order(2941319..2941321,2941328..2941333,
2941400..2941402,2941412..2941417,2941424..2941429,
2941622..2941624,2941706..2941711,2941718..2941723,
2941733..2941738,2942060..2942062,2942069..2942074,
2942081..2942083,2942423..2942425,2942435..2942437))
/gene="araE"
/locus_tag="SF2851"
/note="chemical substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:340873"
gene complement(2942857..2943618)
/gene="kduD"
/locus_tag="SF2852"
/db_xref="GeneID:1025793"
CDS complement(2942857..2943618)
/gene="kduD"
/locus_tag="SF2852"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="2-deoxy-D-gluconate 3-dehydrogenase"
/protein_id="NP_708631.1"
/db_xref="GeneID:1025793"
/translation="MILSAFSLQGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE
PTETIEQVTALGRRFLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDAL
EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA
SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
GLPSDLMGPVVFLASSASDYVNGYTIAVDGGWLAR"
misc_feature complement(2942860..2943618)
/gene="kduD"
/locus_tag="SF2852"
/note="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;
Region: PRK08993"
/db_xref="CDD:181605"
misc_feature complement(order(2943031..2943042,2943046..2943057,
2943133..2943135,2943145..2943147,2943184..2943192,
2943274..2943276,2943334..2943345,2943421..2943429,
2943490..2943498,2943553..2943564,2943568..2943570))
/gene="kduD"
/locus_tag="SF2852"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187605"
misc_feature complement(order(2943091..2943099,2943103..2943111,
2943115..2943120,2943127..2943132,2943139..2943144,
2943151..2943156,2943172..2943180,2943235..2943237,
2943244..2943246,2943253..2943258,2943265..2943267,
2943280..2943282,2943289..2943294,2943301..2943303,
2943307..2943321,2943412..2943414))
/gene="kduD"
/locus_tag="SF2852"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:187605"
misc_feature complement(order(2943133..2943135,2943145..2943147,
2943184..2943186,2943271..2943273))
/gene="kduD"
/locus_tag="SF2852"
/note="active site"
/db_xref="CDD:187605"
gene complement(2943648..2944484)
/gene="kduI"
/locus_tag="SF2853"
/db_xref="GeneID:1025798"
CDS complement(2943648..2944484)
/gene="kduI"
/locus_tag="SF2853"
/codon_start=1
/transl_table=11
/product="5-keto-4-deoxyuronate isomerase"
/protein_id="NP_708632.1"
/db_xref="GeneID:1025798"
/translation="MDVRQSIHGAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDR
IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFNDMDHVGVKD
LR"
misc_feature complement(2943651..2944484)
/gene="kduI"
/locus_tag="SF2853"
/note="5-keto-4-deoxyuronate isomerase; Provisional;
Region: PRK00924"
/db_xref="CDD:179169"
gene complement(2944771..2945952)
/gene="yqeF"
/locus_tag="SF2854"
/db_xref="GeneID:1025837"
CDS complement(2944771..2945952)
/gene="yqeF"
/locus_tag="SF2854"
/note="Code: I; COG: COG0183"
/codon_start=1
/transl_table=11
/product="acyltransferase"
/protein_id="NP_708633.2"
/db_xref="GeneID:1025837"
/translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
QCGEADIVIAGGQENMSRAPHVLTDSRTGEQLGNSQLVDSLVHDGLWDAFNDYHIGVT
AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQ
PRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
E"
misc_feature complement(2944777..2945952)
/gene="yqeF"
/locus_tag="SF2854"
/note="putative acyltransferase; Provisional; Region:
PRK05790"
/db_xref="CDD:180261"
gene 2946207..2947436
/locus_tag="SF2855"
/pseudogene="unknown"
/db_xref="GeneID:1025834"
mobile_element 2948006..2949263
/mobile_element_type="insertion sequence:IS3"
gene 2948062..2948370
/locus_tag="SF2856"
/db_xref="GeneID:1025827"
CDS 2948062..2948370
/locus_tag="SF2856"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3 transposase InsE"
/protein_id="NP_708635.1"
/db_xref="GeneID:1025827"
/translation="MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSL
YESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK
"
misc_feature 2948095..2948352
/locus_tag="SF2856"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2948367..2949233
/locus_tag="SF2857"
/db_xref="GeneID:1025820"
CDS 2948367..2949233
/locus_tag="SF2857"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3A transposase InsF"
/protein_id="NP_708636.1"
/db_xref="GeneID:1025820"
/translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ
FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF
SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLPCDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM
SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG
LSPEQFENQNLA"
misc_feature <2948367..2949215
/locus_tag="SF2857"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(2949247..2949840)
/locus_tag="SF2858"
/db_xref="GeneID:1025831"
CDS complement(2949247..2949840)
/locus_tag="SF2858"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708637.1"
/db_xref="GeneID:1025831"
/translation="MVIYAFNKRLMDYFMKGKSALTLLLAGIFSCGTCQATEAEVTSE
SVFNILNSRGAATDKSYLSLNPDKYPNYRLLIHSAKLKNEIKSHYTKDETQGLLTLTE
NTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAK
KVLLTLWGYMSTPDQIKRMQDIISNPKRLDGILILPT"
gene complement(2950472..2951461)
/locus_tag="SF2859"
/db_xref="GeneID:1025826"
CDS complement(2950472..2951461)
/locus_tag="SF2859"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708638.1"
/db_xref="GeneID:1025826"
/translation="MNMTKNAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAK
TVKAMLNGVLKDAQDNIPFPVEVLPTRNSLPTPIIAHTLADRSVLVPVRGGKRPEVVT
APSGTEITVEPIEQAILVSHQTKLWDQKSTTGFTQGTLQQDALNICDNVIRTINSKMV
DVLESSKLLKTVELPALTGSLTAKADAIMDALYENTESSFGSEVSDYGIIAHESHLKA
LSRLAAKQGFGGEDAIVDMLGTDVAYYNGEDRGVFMMAKRFTALSFGCFRHDGESITV
VLSRDGDSQSHDLEILGKVFVVAEAATTIKMGTGSATAVLPVVKRLSFTKEAN"
gene complement(2951545..2952036)
/locus_tag="SF2860"
/db_xref="GeneID:1023543"
CDS complement(2951545..2952036)
/locus_tag="SF2860"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708639.1"
/db_xref="GeneID:1023543"
/translation="MMFNNNNWKLSVTDINLYENTVSLDGQSYPLSLAIKTLIPGYLS
GLPSTSREAMELLEALAEAGVTIGNFFSNDLMTAYQRRQMNKRAEAERIAKELASQKE
RTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRAAIVADLESGGNWM
DSL"
gene complement(2952334..2953080)
/locus_tag="SF2861"
/db_xref="GeneID:1025829"
CDS complement(2952334..2953080)
/locus_tag="SF2861"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708640.1"
/db_xref="GeneID:1025829"
/translation="MSQQEISIINLDQLVSMTSVEIAELTGKEHKHVLRDIRNMVEEL
NGAKTEHCSTLSSELNGSKFGLVGEEVYKDAKGESRTMYRLDRKHTFILVAGYSVHLR
AKCYDHIQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKTYGLPAQKLMTALLQHR
GLFRKNPISNEWSVNPKYSDCFRIIKPSDQKFSAGGYNFRFNAKGLEVFGKPEMVDKM
RGILIAFTGTDQQKQEHLLKLAQSGKVEGI"
misc_feature complement(<2952790..2953080)
/locus_tag="SF2861"
/note="Phage regulatory protein Rha [Mobilome: prophages,
transposons]; Region: pRha; COG3646"
/db_xref="CDD:442863"
mobile_element 2953406..2954658
/mobile_element_type="insertion sequence:IS911"
gene 2953442..2953780
/locus_tag="SF2862"
/db_xref="GeneID:1025817"
CDS 2953442..2953780
/locus_tag="SF2862"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS911 transposase
InsN"
/protein_id="NP_708641.1"
/db_xref="GeneID:1025817"
/translation="MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAM
DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATAL
LMSDSLNSSR"
misc_feature 2953481..2953750
/locus_tag="SF2862"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 2954073..2954650
/locus_tag="SF2864"
/pseudogene="unknown"
/db_xref="GeneID:1026819"
gene complement(2955455..2955787)
/locus_tag="SF2865"
/db_xref="GeneID:1025849"
CDS complement(2955455..2955787)
/locus_tag="SF2865"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708644.2"
/db_xref="GeneID:1025849"
/translation="MASEDWQREHHCRTGIIFTAFAIEAMFIFYRKQVDPGYDKTQKE
CRKTMHKNTLKLCGINNYMGTKPYQIIKECLEVRDAIAHGDSYTSSFNFSADHLDNQD
DIAKVSWR"
gene complement(2955906..2957516)
/locus_tag="SF2866"
/db_xref="GeneID:1025824"
CDS complement(2955906..2957516)
/locus_tag="SF2866"
/codon_start=1
/transl_table=11
/product="integrase"
/protein_id="NP_708645.1"
/db_xref="GeneID:1025824"
/translation="MLKSRTYLYQRNGVFYIRLRMKTTSRLTASLPSHNRYKLASVSL
RTKDRRTAMAHSRHIKSALKAIHADNPNASYEELREHLKTIVEWELSVSRDDLNDPES
YQLYVDQYDDIKSNLREAVATERLTVDQHRYINDVIGVLKACQDRLNGDSSGLLSYLE
PETGSLRPSVSLSVLAEPEVPEPKALTLASLIEQYEQENAQNWKPATLSENRASHSTL
IEIFDYLDIQDVGKATRADMLRVREVLQQLPKNRKQRFKSMPLSDLLNRESKTDCLDV
VTINNKYLIKMAAVFKWAVRNDLIAKNLTEGLELKVPQRKASDARDAFSPEQVGQLLV
AAKAYSQKTSGKPYHYYVTALAAITGARLNEVAQLQVKDVRTTEAGTVFIHINEDDSS
LPGKSIKNAHSDRCVPLVDGAYGFVLADFMSLVEDRRKTEGDNAMVFNGLKLMKNGYG
EQVSKWFNRTLLPKVLADRSGLAFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITY
DRYAKEVEVETLKEKLAESLSVKKIDGK"
misc_feature complement(2957322..2957498)
/locus_tag="SF2866"
/note="Domain of unknown function (DUF6538); Region:
DUF6538; pfam20172"
/db_xref="CDD:466323"
misc_feature complement(2955978..2956547)
/locus_tag="SF2866"
/note="Uncharacterized site-specific tyrosine recombinase,
C-terminal catalytic domain; Region: INT_C_like_1;
cd01184"
/db_xref="CDD:271184"
misc_feature complement(order(2955984..2955986,2956080..2956085,
2956092..2956094,2956431..2956433))
/locus_tag="SF2866"
/note="active site"
/db_xref="CDD:271184"
gene complement(2957651..2957724)
/locus_tag="SF4506"
/db_xref="GeneID:3161796"
tRNA complement(2957651..2957724)
/locus_tag="SF4506"
/product="tRNA-Gly"
/codon_recognized="GGG"
/db_xref="GeneID:3161796"
gene complement(2957803..2958582)
/locus_tag="SF2867"
/db_xref="GeneID:1025880"
CDS complement(2957803..2958582)
/locus_tag="SF2867"
/note="Code: M; COG: COG0739"
/codon_start=1
/transl_table=11
/product="lipoprotein"
/protein_id="NP_708646.1"
/db_xref="GeneID:1025880"
/translation="MFFKRGKILSAGRLNKKSLGIVMFLSVGLLLAGCSGSKSSDTGT
YSGSVYTVKRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTR
KSTAKSTTKTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISA
PRGTPIYAAGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQ
KIATMGSTDAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
misc_feature complement(2957806..2958540)
/locus_tag="SF2867"
/note="amidase activator ActS; Region: amid_act_ActS;
NF040883"
/db_xref="CDD:468819"
gene 2958973..2961270
/locus_tag="SF2868"
/db_xref="GeneID:1025870"
CDS 2958973..2961270
/locus_tag="SF2868"
/note="Code: C; COG: COG1529"
/codon_start=1
/transl_table=11
/product="xanthine dehydrogenase subunit XdhA"
/protein_id="NP_708647.1"
/db_xref="GeneID:1025870"
/translation="MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVR
SPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALL
TRHVRHHGDAVAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALTEDAAPIHNGGN
LLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
QIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKV
SLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGEN
KVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEI
RLRNAAREGDANPLTGKRICSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVA
CFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVS
DVRVISTQDTDVTPFDPGAFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNL
TLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVD
LTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGV
VRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMA
TGVAINTLPLTPKRLYEEFHLAGLI"
misc_feature 2958991..2961267
/locus_tag="SF2868"
/note="xanthine dehydrogenase subunit XdhA; Provisional;
Region: PRK09970"
/db_xref="CDD:236637"
gene 2961281..2962159
/gene="ygeT"
/locus_tag="SF2869"
/db_xref="GeneID:1025825"
CDS 2961281..2962159
/gene="ygeT"
/locus_tag="SF2869"
/note="Code: C; COG: COG1319"
/codon_start=1
/transl_table=11
/product="xanthine dehydrogenase subunit XdhB"
/protein_id="NP_708648.1"
/db_xref="GeneID:1025825"
/translation="MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHND
RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATFIAG
PQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL
EHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG
VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPHSSWRASKEFRLHLIQTMT
KKVISEAVAAAGGKLQ"
misc_feature 2961281..2962153
/gene="ygeT"
/locus_tag="SF2869"
/note="xanthine dehydrogenase subunit XdhB; Provisional;
Region: PRK09971"
/db_xref="CDD:182175"
gene 2962156..2962635
/locus_tag="SF2870"
/db_xref="GeneID:1025818"
CDS 2962156..2962635
/locus_tag="SF2870"
/note="Code: C; COG: COG2080"
/codon_start=1
/transl_table=11
/product="xanthine dehydrogenase subunit XdhC"
/protein_id="NP_708649.1"
/db_xref="GeneID:1025818"
/translation="MNHSETITTECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC
CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGTVQ
CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK"
misc_feature 2962156..2962632
/locus_tag="SF2870"
/note="xanthine dehydrogenase iron sulfur-binding subunit
XdhC; Region: PRK09908"
/db_xref="CDD:182139"
mobile_element 2962693..2963246
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene 2962748..2963023
/gene="insA"
/locus_tag="SF2871"
/db_xref="GeneID:1025816"
CDS 2962748..2963023
/gene="insA"
/locus_tag="SF2871"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708650.1"
/db_xref="GeneID:1025816"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 2962769..>2963020
/gene="insA"
/locus_tag="SF2871"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
mobile_element complement(2963247..2964577)
/mobile_element_type="insertion sequence:IS2"
gene complement(2963258..2964163)
/locus_tag="SF2872"
/db_xref="GeneID:1025815"
CDS complement(2963258..2964163)
/locus_tag="SF2872"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_708651.1"
/db_xref="GeneID:1025815"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature complement(2963261..2964163)
/locus_tag="SF2872"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene complement(2964121..2964531)
/locus_tag="SF2873"
/db_xref="GeneID:1025841"
CDS complement(2964121..2964531)
/locus_tag="SF2873"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_708652.3"
/db_xref="GeneID:1025841"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(2964124..2964486)
/locus_tag="SF2873"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
mobile_element 2964578..2964796
/note="partial"
/mobile_element_type="insertion sequence:IS1"
gene 2965213..2966730
/gene="ygfU"
/locus_tag="SF2874"
/db_xref="GeneID:1025886"
CDS 2965213..2966730
/gene="ygfU"
/locus_tag="SF2874"
/note="Code: F; COG: COG2233"
/codon_start=1
/transl_table=11
/product="permease"
/protein_id="NP_708653.1"
/db_xref="GeneID:1025886"
/translation="MCLDSFINVNGCFLFWRAKGETLMSAIDSQLPSSSGQDRPTDEV
DRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKDAIAMLISSDLFCCGIVTL
LQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAP
LIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFI
LLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFD
PVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIICGLRVDGVGTMIGGTFNSF
PHTSFSQNVGLVSVMRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVM
FGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSG
IMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLEVRTVRMWLLMRKLKKNEHGE"
misc_feature 2965381..2966610
/gene="ygfU"
/locus_tag="SF2874"
/note="xanthine permease; Region: pbuX; TIGR03173"
/db_xref="CDD:274468"
gene 2966980..2967528
/locus_tag="SF2875"
/db_xref="GeneID:1025913"
CDS 2966980..2967528
/locus_tag="SF2875"
/note="Code: I; COG: COG1443"
/codon_start=1
/transl_table=11
/product="isopentenyl-diphosphate delta-isomerase"
/protein_id="NP_708654.1"
/db_xref="GeneID:1025913"
/translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKG
QLLVTRRALSKKAWPGVWTNSVCGHPQLGESSEDAVIRRCRYELGVEITPPESIYPDF
RYRATDPRGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLRGIDATPWAFSP
WMVMQATNREARIRLSAFTQLK"
misc_feature 2966980..2967519
/locus_tag="SF2875"
/note="isopentenyl-diphosphate Delta-isomerase; Region:
PRK03759"
/db_xref="CDD:235156"
gene complement(2967571..2969088)
/gene="lysS"
/locus_tag="SF2876"
/db_xref="GeneID:1025848"
CDS complement(2967571..2969088)
/gene="lysS"
/locus_tag="SF2876"
/note="Code: J; COG: COG1190"
/codon_start=1
/transl_table=11
/product="lysyl-tRNA synthetase"
/protein_id="NP_708655.1"
/db_xref="GeneID:1025848"
/translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE
YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
misc_feature complement(2967580..2969049)
/gene="lysS"
/locus_tag="SF2876"
/note="lysyl-tRNA synthetase; Reviewed; Region: lysS;
PRK00484"
/db_xref="CDD:234778"
misc_feature complement(2968450..2968464)
/gene="lysS"
/locus_tag="SF2876"
/note="motif 1; other site"
/db_xref="CDD:238398"
misc_feature complement(order(2967646..2967648,2967802..2967804,
2967814..2967816,2967823..2967825,2967844..2967846,
2968264..2968266,2968276..2968278,2968294..2968296,
2968300..2968302,2968366..2968368))
/gene="lysS"
/locus_tag="SF2876"
/note="active site"
/db_xref="CDD:238398"
misc_feature complement(2968294..2968305)
/gene="lysS"
/locus_tag="SF2876"
/note="motif 2; other site"
/db_xref="CDD:238398"
misc_feature complement(2967646..2967657)
/gene="lysS"
/locus_tag="SF2876"
/note="motif 3; other site"
/db_xref="CDD:238398"
gene complement(2969098..2969979)
/locus_tag="SF2877"
/db_xref="GeneID:1025823"
CDS complement(2969098..2969979)
/locus_tag="SF2877"
/codon_start=1
/transl_table=11
/product="peptide chain release factor"
/protein_id="YP_008439277.1"
/db_xref="GeneID:1025823"
/translation="MKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFR
RMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVA
GIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDI
EINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQ
MKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAV
LDGSLDQFIEASLKAGL"
misc_feature complement(2969101..2969979)
/locus_tag="SF2877"
/note="This domain is found in peptide chain release
factors; Region: PCRF; cl40670"
/db_xref="CDD:477417"
gene complement(2970287..2972020)
/gene="recJ"
/locus_tag="SF2878"
/db_xref="GeneID:1025877"
CDS complement(2970287..2972020)
/gene="recJ"
/locus_tag="SF2878"
/note="Code: L; COG: COG0608"
/codon_start=1
/transl_table=11
/product="ssDNA exonuclease RecJ"
/protein_id="NP_708656.1"
/db_xref="GeneID:1025877"
/translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS
VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN
IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
HHLPGDTLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
GMQVEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
ELVTEWLAPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
LQIIIDNIWPI"
misc_feature complement(2970290..2972014)
/gene="recJ"
/locus_tag="SF2878"
/note="single-stranded-DNA-specific exonuclease RecJ;
Region: PRK11070"
/db_xref="CDD:182944"
gene complement(2972026..2972736)
/gene="dsbC"
/locus_tag="SF2879"
/db_xref="GeneID:1025889"
CDS complement(2972026..2972736)
/gene="dsbC"
/locus_tag="SF2879"
/note="Code: O; COG: COG1651"
/codon_start=1
/transl_table=11
/product="protein disulfide isomerase"
/protein_id="NP_708657.1"
/db_xref="GeneID:1025889"
/translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYK
APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIW
CAKDKNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQP
PKDMKEFLDEHQKMTSGK"
misc_feature complement(2972044..2972736)
/gene="dsbC"
/locus_tag="SF2879"
/note="protein disulfide isomerase II DsbC; Provisional;
Region: PRK10877"
/db_xref="CDD:182802"
misc_feature complement(order(2972521..2972604,2972611..2972637))
/gene="dsbC"
/locus_tag="SF2879"
/note="dimerization domain [polypeptide binding]; other
site"
/db_xref="CDD:239318"
misc_feature complement(2972521..2972544)
/gene="dsbC"
/locus_tag="SF2879"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:239318"
misc_feature complement(order(2972374..2972376,2972383..2972385))
/gene="dsbC"
/locus_tag="SF2879"
/note="catalytic residues [active]"
/db_xref="CDD:239318"
gene complement(2972761..2973657)
/gene="xerD"
/locus_tag="SF2880"
/db_xref="GeneID:1025811"
CDS complement(2972761..2973657)
/gene="xerD"
/locus_tag="SF2880"
/note="Code: L; COG: COG0582"
/codon_start=1
/transl_table=11
/product="site-specific tyrosine recombinase XerD"
/protein_id="NP_708658.1"
/db_xref="GeneID:1025811"
/translation="MKQELARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
QIYTHVATERLRQLHQQHHPRA"
misc_feature complement(2972764..2973657)
/gene="xerD"
/locus_tag="SF2880"
/note="tyrosine recombinase; Region: xerD; PRK00283"
/db_xref="CDD:234713"
misc_feature complement(order(2972821..2972823,2972914..2972919,
2972926..2972928,2973214..2973216))
/gene="xerD"
/locus_tag="SF2880"
/note="active site"
/db_xref="CDD:271179"
gene 2973769..2974290
/gene="fldB"
/locus_tag="SF2881"
/db_xref="GeneID:1026820"
CDS 2973769..2974290
/gene="fldB"
/locus_tag="SF2881"
/note="Code: C; COG: COG0716"
/codon_start=1
/transl_table=11
/product="flavodoxin FldB"
/protein_id="NP_708659.1"
/db_xref="GeneID:1026820"
/translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIIALYGLGDQLGYGEWFLDALG
MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW
CEQILNEMAEHYA"
misc_feature 2973769..2974284
/gene="fldB"
/locus_tag="SF2881"
/note="flavodoxin FldB; Provisional; Region: PRK12359"
/db_xref="CDD:183471"
gene complement(2974330..2974737)
/locus_tag="SF2882"
/db_xref="GeneID:1025845"
CDS complement(2974330..2974737)
/locus_tag="SF2882"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708660.1"
/db_xref="GeneID:1025845"
/translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
LLSLVVFDCVRSQRCINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR"
misc_feature complement(2974345..2974734)
/locus_tag="SF2882"
/note="Membrane-bound toxin component of toxin-antitoxin
system; Region: Cpta_toxin; pfam07254"
/db_xref="CDD:462123"
gene complement(2974718..2974984)
/gene="ygfY"
/locus_tag="SF2883"
/db_xref="GeneID:1025902"
CDS complement(2974718..2974984)
/gene="ygfY"
/locus_tag="SF2883"
/note="Code: S; COG: COG2938"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708661.1"
/db_xref="GeneID:1025902"
/translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
RLLECDDPDLFNWLMNHGKPADAELEIMVRLIQTRNRERGPVAI"
misc_feature complement(2974721..2974936)
/gene="ygfY"
/locus_tag="SF2883"
/note="FAD assembly factor SdhE; Region: PRK10878"
/db_xref="CDD:182803"
gene 2975227..2976207
/gene="ygfZ"
/locus_tag="SF2884"
/db_xref="GeneID:1025887"
CDS 2975227..2976207
/gene="ygfZ"
/locus_tag="SF2884"
/note="Code: R; COG: COG0354"
/codon_start=1
/transl_table=11
/product="global regulator"
/protein_id="NP_708662.1"
/db_xref="GeneID:1025887"
/translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
VTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
VFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAER
FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT
GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
misc_feature 2975227..2976204
/gene="ygfZ"
/locus_tag="SF2884"
/note="putative global regulator; Reviewed; Region:
PRK09559"
/db_xref="CDD:236567"
gene complement(2976403..2977062)
/locus_tag="SF2885"
/db_xref="GeneID:1025840"
CDS complement(2976403..2977062)
/locus_tag="SF2885"
/note="Code: R; COG: COG1272"
/codon_start=1
/transl_table=11
/product="hemolysin"
/protein_id="NP_708663.1"
/db_xref="GeneID:1025840"
/translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL
NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF
LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA
VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQ
A"
misc_feature complement(2976406..2977062)
/locus_tag="SF2885"
/note="hemolysin; Provisional; Region: PRK15087"
/db_xref="CDD:185044"
gene complement(2977226..2977536)
/gene="yqfB"
/locus_tag="SF2886"
/pseudo
/db_xref="GeneID:1025879"
misc_feature complement(2977226..2977536)
/gene="yqfB"
/locus_tag="SF2886"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789267 (104 aa). BLAST with
identity of 98% in 103 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 2977581..2979014
/gene="bglA"
/locus_tag="SF2887"
/db_xref="GeneID:1025852"
CDS 2977581..2979014
/gene="bglA"
/locus_tag="SF2887"
/note="Code: G; COG: COG2723"
/codon_start=1
/transl_table=11
/product="6-phospho-beta-glucosidase"
/protein_id="NP_708664.2"
/db_xref="GeneID:1025852"
/translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTCGAHG
VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
QPNEEGLKFYDSLFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKFVDFFVRFAE
VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHDNPEETMYQVLHHQFV
ASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLCGY
YPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFE
GSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSIND
DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDD
GTGDMSRSRKKSFNWYKEVIASNGEKL"
misc_feature 2977581..2979011
/gene="bglA"
/locus_tag="SF2887"
/note="6-phospho-beta-glucosidase BglA; Provisional;
Region: PRK15014"
/db_xref="CDD:184975"
gene complement(2979071..2979814)
/gene="ygfF"
/locus_tag="SF2888"
/db_xref="GeneID:1025832"
CDS complement(2979071..2979814)
/gene="ygfF"
/locus_tag="SF2888"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="NAD(P)-binding oxidoreductase"
/protein_id="NP_708665.2"
/db_xref="GeneID:1025832"
/translation="MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMN
LIMQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAE
RINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASK
GAIDSLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQA
EEVAQAIVWLLSDKASYVTGSFIDLAGGK"
misc_feature complement(2979074..2979814)
/gene="ygfF"
/locus_tag="SF2888"
/note="SDR family oxidoreductase; Region: PRK09730"
/db_xref="CDD:182051"
misc_feature complement(order(2979239..2979244,2979248..2979259,
2979335..2979337,2979347..2979349,2979389..2979397,
2979485..2979487,2979551..2979559,2979635..2979643,
2979713..2979721,2979776..2979787,2979791..2979793))
/gene="ygfF"
/locus_tag="SF2888"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature complement(order(2979335..2979337,2979347..2979349,
2979389..2979391,2979482..2979484))
/gene="ygfF"
/locus_tag="SF2888"
/note="active site"
/db_xref="CDD:212491"
gene complement(2980081..2982954)
/gene="gcvP"
/locus_tag="SF2889"
/db_xref="GeneID:1025878"
CDS complement(2980081..2982954)
/gene="gcvP"
/locus_tag="SF2889"
/codon_start=1
/transl_table=11
/product="glycine dehydrogenase"
/protein_id="NP_708666.1"
/db_xref="GeneID:1025878"
/translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM
LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
AKRVSKLKNANRFFVASNVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
VEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
LGSCTMKLNAAAEMIPITWTEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
AFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLM
VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ"
misc_feature complement(2980105..2982906)
/gene="gcvP"
/locus_tag="SF2889"
/note="glycine dehydrogenase (decarboxylating); Region:
gcvP; TIGR00461"
/db_xref="CDD:273089"
gene complement(2983073..2983462)
/gene="gcvH"
/locus_tag="SF2890"
/db_xref="GeneID:1025851"
CDS complement(2983073..2983462)
/gene="gcvH"
/locus_tag="SF2890"
/note="Code: E; COG: COG0509"
/codon_start=1
/transl_table=11
/product="glycine cleavage system protein H"
/protein_id="NP_708667.2"
/db_xref="GeneID:1025851"
/translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
FKIKASDESELESLLDATAYEALLEDE"
misc_feature complement(2983076..2983459)
/gene="gcvH"
/locus_tag="SF2890"
/note="Glycine cleavage system protein H (lipoate-binding)
[Amino acid transport and metabolism]; Region: GcvH;
COG0509"
/db_xref="CDD:440275"
gene complement(2983486..2984580)
/gene="gcvT"
/locus_tag="SF2891"
/db_xref="GeneID:1025944"
CDS complement(2983486..2984580)
/gene="gcvT"
/locus_tag="SF2891"
/note="Code: E; COG: COG0404"
/codon_start=1
/transl_table=11
/product="glycine cleavage system aminomethyltransferase
T"
/protein_id="NP_708668.1"
/db_xref="GeneID:1025944"
/translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY
YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
NDAQRQAVEGMKPFFGVQVGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPTDRDFIGREALEVQREH
GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
misc_feature complement(2983495..2984580)
/gene="gcvT"
/locus_tag="SF2891"
/note="glycine cleavage system aminomethyltransferase
GcvT; Region: gcvT; PRK00389"
/db_xref="CDD:234742"
gene complement(2985028..2986230)
/gene="visC"
/locus_tag="SF2892"
/db_xref="GeneID:1025846"
CDS complement(2985028..2986230)
/gene="visC"
/locus_tag="SF2892"
/note="Code: HC; COG: COG0654"
/codon_start=1
/transl_table=11
/product="2-octaprenylphenol hydroxylase"
/protein_id="NP_708669.1"
/db_xref="GeneID:1025846"
/translation="MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAVDA
LPQLRVSAINAASEKLLTRLGVWQDILARRASCYHGMEVWDKDSFGHISFDDQSMGYS
HLGHIVENSVIHYALWNKAQQSSDITLLAPTELQQVAWGENETFLTLKDGSMLTARLV
IGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA
RQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
YERSRKHSAALMLAGMQGFRDLFSGANPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
NDLPEWLR"
misc_feature complement(2985031..2986230)
/gene="visC"
/locus_tag="SF2892"
/note="oxidoreductase; Provisional; Region: PRK08013"
/db_xref="CDD:236139"
gene complement(2986253..2987431)
/gene="ubiH"
/locus_tag="SF2893"
/db_xref="GeneID:1025867"
CDS complement(2986253..2987431)
/gene="ubiH"
/locus_tag="SF2893"
/note="Code: HC; COG: COG0654"
/codon_start=1
/transl_table=11
/product="2-octaprenyl-6-methoxyphenyl hydroxylase"
/protein_id="NP_708670.1"
/db_xref="GeneID:1025867"
/translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
GQVVELHNVGQRLFALLRKAPGVMLHCPDRVANVARTQSHVEVTLESGEMLTGRVLIA
ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGQITHAGKRSAYPLALTRAARP
ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQ
RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
"
misc_feature complement(2986256..2987431)
/gene="ubiH"
/locus_tag="SF2893"
/note="2-octaprenyl-6-methoxyphenyl hydroxylase;
Validated; Region: PRK05732"
/db_xref="CDD:235584"
gene complement(2987428..2988753)
/gene="pepP"
/locus_tag="SF2894"
/db_xref="GeneID:1025847"
CDS complement(2987428..2988753)
/gene="pepP"
/locus_tag="SF2894"
/note="Code: E; COG: COG0006"
/codon_start=1
/transl_table=11
/product="proline aminopeptidase P II"
/protein_id="NP_708671.1"
/db_xref="GeneID:1025847"
/translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY
RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVNSALEKLRKGSRQNLTAP
ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH
EFNRHGARYPSYNTIVGSGENGCILHYTENESELRDGDLVLIDAGCEYKGYAGDITRT
FPVNGKFTQAQREIYDIVLESLETSLHLYRPGTSILEVTGEVVRIMVSGLVKLGILKG
NVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
ADVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
misc_feature complement(2987431..2988744)
/gene="pepP"
/locus_tag="SF2894"
/note="proline aminopeptidase P II; Provisional; Region:
PRK10879"
/db_xref="CDD:182804"
gene complement(2988779..2989357)
/gene="ygfB"
/locus_tag="SF2895"
/db_xref="GeneID:1025842"
CDS complement(2988779..2989357)
/gene="ygfB"
/locus_tag="SF2895"
/note="Code: S; COG: COG3079"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708672.2"
/db_xref="GeneID:1025842"
/translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
misc_feature complement(2988782..2989354)
/gene="ygfB"
/locus_tag="SF2895"
/note="hypothetical protein; Reviewed; Region: PRK01736"
/db_xref="CDD:234976"
gene 2989525..2989854
/gene="ygfE"
/locus_tag="SF2896"
/db_xref="GeneID:1025844"
CDS 2989525..2989854
/gene="ygfE"
/locus_tag="SF2896"
/note="Code: S; COG: COG3027"
/codon_start=1
/transl_table=11
/product="Z-ring-associated protein"
/protein_id="NP_708673.1"
/db_xref="GeneID:1025844"
/translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
KTNQNFE"
misc_feature 2989525..2989851
/gene="ygfE"
/locus_tag="SF2896"
/note="cell division protein ZapA; Region: PRK10972"
/db_xref="CDD:182874"
gene 2989896..2990079
/gene="ssrS"
/locus_tag="SF4560"
/db_xref="GeneID:1025835"
ncRNA 2989896..2990079
/ncRNA_class="other"
/gene="ssrS"
/locus_tag="SF4560"
/product="6S RNA"
/db_xref="GeneID:1025835"
gene 2990154..2990702
/gene="ygfA"
/locus_tag="SF2897"
/db_xref="GeneID:1025876"
CDS 2990154..2990702
/gene="ygfA"
/locus_tag="SF2897"
/note="Code: H; COG: COG0212"
/codon_start=1
/transl_table=11
/product="5-formyltetrahydrofolate cyclo-ligase"
/protein_id="NP_708674.2"
/db_xref="GeneID:1025876"
/translation="MIRQRRRALTPEQQLEMGQQAATRMMTYPPVVMAHTVAVFLSFD
GELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVR
DVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEK
LPVEEWDIPLPAVVTPSKVWEW"
misc_feature 2990154..2990699
/gene="ygfA"
/locus_tag="SF2897"
/note="5-formyltetrahydrofolate cyclo-ligase family
protein; Provisional; Region: PRK10333"
/db_xref="CDD:182385"
gene complement(2991483..2992715)
/gene="serA"
/locus_tag="SF2898"
/db_xref="GeneID:1025927"
CDS complement(2991483..2992715)
/gene="serA"
/locus_tag="SF2898"
/note="Code: E; COG: COG0111"
/codon_start=1
/transl_table=11
/product="D-3-phosphoglycerate dehydrogenase"
/protein_id="NP_708675.1"
/db_xref="GeneID:1025927"
/translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
ALQAMKAIPGTIRARLLY"
misc_feature complement(2991486..2992715)
/gene="serA"
/locus_tag="SF2898"
/note="phosphoglycerate dehydrogenase; Region: PRK11790"
/db_xref="CDD:236985"
misc_feature complement(order(2992392..2992394,2992461..2992469,
2992533..2992538))
/gene="serA"
/locus_tag="SF2898"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:240653"
misc_feature complement(order(2991831..2991836,2991840..2991842,
2991924..2991926,2991996..2992004,2992056..2992058,
2992065..2992070,2992080..2992088,2992161..2992163,
2992170..2992178,2992230..2992244,2992380..2992382,
2992392..2992394,2992398..2992400,2992464..2992466))
/gene="serA"
/locus_tag="SF2898"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:240653"
misc_feature complement(order(2991813..2991815,2991819..2991830,
2991834..2991857,2991864..2991866,2991870..2991875,
2991885..2991890,2991897..2991899,2991906..2991911,
2991918..2991920,2992197..2992202,2992260..2992262,
2992266..2992301,2992305..2992307,2992311..2992316,
2992323..2992328,2992335..2992337,2992341..2992343,
2992350..2992355,2992359..2992367,2992371..2992376,
2992383..2992388))
/gene="serA"
/locus_tag="SF2898"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:240653"
gene complement(2992971..2993630)
/gene="rpiA"
/locus_tag="SF2899"
/db_xref="GeneID:1025914"
CDS complement(2992971..2993630)
/gene="rpiA"
/locus_tag="SF2899"
/note="Code: G; COG: COG0120"
/codon_start=1
/transl_table=11
/product="ribose-5-phosphate isomerase A"
/protein_id="NP_708676.2"
/db_xref="GeneID:1025914"
/translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV
VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
K"
misc_feature complement(2992980..2993630)
/gene="rpiA"
/locus_tag="SF2899"
/note="ribose-5-phosphate isomerase RpiA; Region:
PRK00702"
/db_xref="CDD:234816"
misc_feature complement(order(2993130..2993132,2993142..2993144,
2993148..2993150,2993157..2993162,2993340..2993345,
2993424..2993426,2993430..2993432,2993457..2993462,
2993469..2993471,2993547..2993549))
/gene="rpiA"
/locus_tag="SF2899"
/note="tetramer (dimer of dimers) interface [polypeptide
binding]; other site"
/db_xref="CDD:238692"
misc_feature complement(order(2993268..2993270,2993322..2993324,
2993340..2993351,2993379..2993381,2993385..2993390,
2993538..2993543,2993547..2993549))
/gene="rpiA"
/locus_tag="SF2899"
/note="active site"
/db_xref="CDD:238692"
misc_feature complement(order(2993052..2993054,2993067..2993072,
2993196..2993198,2993205..2993213,2993217..2993222,
2993304..2993306,2993325..2993327,2993409..2993411,
2993421..2993423))
/gene="rpiA"
/locus_tag="SF2899"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238692"
gene complement(2993686..2993870)
/gene="yqfE"
/locus_tag="SF2900"
/pseudo
/db_xref="GeneID:1026821"
misc_feature complement(2993686..2993870)
/gene="yqfE"
/locus_tag="SF2900"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789281 (77 aa). BLAST with
identity of 97% in 61 aa. This CDS contains deletion. The
sequence has been checked and is believed to be correct."
/pseudo
gene 2994013..2994906
/gene="iciA"
/locus_tag="SF2901"
/db_xref="GeneID:1025934"
CDS 2994013..2994906
/gene="iciA"
/locus_tag="SF2901"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="chromosome replication initiation inhibitor
protein"
/protein_id="NP_708677.2"
/db_xref="GeneID:1025934"
/translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
RMMRKVTDALLDYGHKVLRQD"
misc_feature 2994019..2994897
/gene="iciA"
/locus_tag="SF2901"
/note="ArgP/LysG family DNA-binding transcriptional
regulator; Region: PRK03635"
/db_xref="CDD:235144"
gene 2995110..2997254
/gene="sbm"
/locus_tag="SF2902"
/db_xref="GeneID:1025843"
CDS 2995110..2997254
/gene="sbm"
/locus_tag="SF2902"
/note="Code: I; COG: COG1884"
/codon_start=1
/transl_table=11
/product="methylmalonyl-CoA mutase"
/protein_id="NP_708678.2"
/db_xref="GeneID:1025843"
/translation="MSNEQEWQQLANKELSRREKTVDSLVQQTAEGIAIKPLYTEADL
DNLEVTGTLPGLPPYVRGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGL
SVAFDLATHRGYDSDNPRVAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAV
LPVLAFYIVAAEEQGVTPDKLTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCS
GNMPRFNTISISGYHMGEAGANCVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSLF
FGIGMDLFMNVAMLRAARYLWSEAVSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNV
IRTTIEALAATLGGTQSLHTNAFDEALGLPTDFSARIARNTQIIIQEESELCHTVDPL
AGSYYIESLTDQIVKQARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQSLIDQGK
RVIVGVNKYKLDHEDETDVLEIDNVMVRNEQIASLERIRATRDDAAVTAALNALTHAA
QHNENLLAAAVNAARVRATLGEISDALEVAFDRYLVPSQCVTGVIAQSYHQSEKSASE
FDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRGAKVIASAYSDLGFDVDLSPMFSTP
EEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAF
LQERGVAAIYGPGTPMLDSVRDVLNLISQHHD"
misc_feature 2995110..2997251
/gene="sbm"
/locus_tag="SF2902"
/note="methylmalonyl-CoA mutase; Reviewed; Region:
PRK09426"
/db_xref="CDD:236508"
gene 2997247..2998242
/gene="ygfD"
/locus_tag="SF2903"
/db_xref="GeneID:1025928"
CDS 2997247..2998242
/gene="ygfD"
/locus_tag="SF2903"
/note="Code: E; COG: COG1703"
/codon_start=1
/transl_table=11
/product="membrane ATPase/protein kinase"
/protein_id="NP_708679.1"
/db_xref="GeneID:1025928"
/translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
DAIMPFCGNALRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
GEKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGIAQS
ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLLVINKDDGDNHTNVAIARHMYE
SALHILRRKYDEWQPRGLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVE
WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD"
misc_feature 2997247..2998236
/gene="ygfD"
/locus_tag="SF2903"
/note="methylmalonyl Co-A mutase-associated GTPase MeaB;
Region: PRK09435"
/db_xref="CDD:236515"
misc_feature order(2997367..2997369,2997376..2997381,2997655..2997657,
2997793..2997798,2997805..2997822,2997892..2997897,
2997904..2997912,2997943..2997945)
/gene="ygfD"
/locus_tag="SF2903"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:349768"
misc_feature order(2997430..2997453,2997844..2997849,2997853..2997855,
2997961..2997969)
/gene="ygfD"
/locus_tag="SF2903"
/note="active site"
/db_xref="CDD:349768"
gene 2998211..2999038
/gene="ygfG"
/locus_tag="SF2904"
/db_xref="GeneID:1025930"
CDS 2998211..2999038
/gene="ygfG"
/locus_tag="SF2904"
/note="Code: I; COG: COG1024"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708680.4"
/db_xref="GeneID:1025930"
/translation="MNLSRRNILIKGIFMSYQYVNVATINKVAVIEFNYGRKLNALSK
VFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQI
TRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIH
NLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPL
AIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
misc_feature 2998253..2999035
/gene="ygfG"
/locus_tag="SF2904"
/note="methylmalonyl-CoA decarboxylase; Provisional;
Region: PRK11423"
/db_xref="CDD:236908"
misc_feature order(2998325..2998327,2998331..2998333,2998430..2998432,
2998442..2998456,2998568..2998570,2998574..2998582,
2998646..2998651,2998658..2998660)
/gene="ygfG"
/locus_tag="SF2904"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:119339"
misc_feature order(2998448..2998450,2998580..2998582)
/gene="ygfG"
/locus_tag="SF2904"
/note="oxyanion hole (OAH) forming residues [active]"
/db_xref="CDD:119339"
misc_feature order(2998520..2998522,2998544..2998546,2998607..2998618,
2998652..2998663,2998679..2998681,2998685..2998693,
2998697..2998702,2998715..2998720,2998724..2998729,
2998733..2998738,2998745..2998747,2998778..2998780,
2998787..2998789,2998832..2998834,2998841..2998846)
/gene="ygfG"
/locus_tag="SF2904"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:119339"
gene 2999062..3000540
/gene="ygfH"
/locus_tag="SF2905"
/pseudo
/db_xref="GeneID:1025915"
misc_feature 2999062..3000540
/gene="ygfH"
/locus_tag="SF2905"
/note="Similar to Escherichia coli K12 coenzyme A
transferase gi: 1789287 (493 aa). BLAST with identity of
98% in 493 aa. This CDS contains an in-frame stop codon.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(3000482..3001432)
/gene="ygfI"
/locus_tag="SF2906"
/db_xref="GeneID:1025932"
CDS complement(3000482..3001432)
/gene="ygfI"
/locus_tag="SF2906"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_708681.2"
/db_xref="GeneID:1025932"
/translation="MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEE
QIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT
YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN
LTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGIN
PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI
RNHRYTATIFSILLKIVTGQTINPASSRLQLNYGVSRRRG"
misc_feature complement(3000578..3001432)
/gene="ygfI"
/locus_tag="SF2906"
/note="DNA-binding transcriptional regulator, LysR family
[Transcription]; Region: LysR; COG0583"
/db_xref="CDD:440348"
gene complement(3001599..3002339)
/gene="yggE"
/locus_tag="SF2907"
/db_xref="GeneID:1025894"
CDS complement(3001599..3002339)
/gene="yggE"
/locus_tag="SF2907"
/note="Code: S; COG: COG2968"
/codon_start=1
/transl_table=11
/product="oxidative stress defense protein"
/protein_id="NP_708682.1"
/db_xref="GeneID:1025894"
/translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI
ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
misc_feature complement(3001638..3002318)
/gene="yggE"
/locus_tag="SF2907"
/note="oxidative stress defense protein; Provisional;
Region: PRK11087"
/db_xref="CDD:236840"
gene complement(3002432..3003067)
/gene="yggA"
/locus_tag="SF2908"
/db_xref="GeneID:1025919"
CDS complement(3002432..3003067)
/gene="yggA"
/locus_tag="SF2908"
/note="Code: R; COG: COG1279"
/codon_start=1
/transl_table=11
/product="arginine exporter protein"
/protein_id="NP_708683.2"
/db_xref="GeneID:1025919"
/translation="MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCA
ISDLVLICAGIFGGSALLMQSPWLLALVTWGGVVFLLWYGFGAFKTAMSSNIELASAE
VLKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWF
FGLAILAAWLAPRLRTAKSQRIINLVVGCVMWFIALQLARDGIAHAQALFS"
misc_feature complement(3002447..3003067)
/gene="yggA"
/locus_tag="SF2908"
/note="arginine exporter ArgO; Region: PRK09304"
/db_xref="CDD:236463"
gene complement(3003206..3004066)
/gene="yggB"
/locus_tag="SF2909"
/db_xref="GeneID:1025924"
CDS complement(3003206..3004066)
/gene="yggB"
/locus_tag="SF2909"
/note="Code: M; COG: COG0668"
/codon_start=1
/transl_table=11
/product="mechanosensitive ion channel MscS"
/protein_id="NP_708684.1"
/db_xref="GeneID:1025924"
/translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
FKRVKEDKAA"
misc_feature complement(3003209..3004066)
/gene="yggB"
/locus_tag="SF2909"
/note="small-conductance mechanosensitive channel MscS;
Region: PRK10334"
/db_xref="CDD:182386"
gene complement(3004257..3005336)
/gene="fba"
/locus_tag="SF2910"
/db_xref="GeneID:1025905"
CDS complement(3004257..3005336)
/gene="fba"
/locus_tag="SF2910"
/note="Code: G; COG: COG0191"
/codon_start=1
/transl_table=11
/product="fructose-bisphosphate aldolase"
/protein_id="NP_708685.2"
/db_xref="GeneID:1025905"
/translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIK
DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
LRAGQTSMIARLEKAFQELNAIDVL"
misc_feature complement(3004260..3005309)
/gene="fba"
/locus_tag="SF2910"
/note="fructose-bisphosphate aldolase; Provisional;
Region: PRK09197"
/db_xref="CDD:236406"
misc_feature complement(order(3004467..3004472,3004476..3004478,
3004533..3004535,3004539..3004544,3004647..3004649,
3004653..3004661,3004788..3004799,3004806..3004808,
3004812..3004814,3004902..3004904,3005004..3005009,
3005229..3005231))
/gene="fba"
/locus_tag="SF2910"
/note="active site"
/db_xref="CDD:238476"
misc_feature complement(order(3004425..3004427,3004434..3004436,
3004446..3004448,3004455..3004460,3004464..3004469,
3004788..3004790,3005046..3005051,3005058..3005060,
3005070..3005072,3005127..3005135,3005142..3005144,
3005205..3005207,3005214..3005222))
/gene="fba"
/locus_tag="SF2910"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:238476"
misc_feature complement(order(3004542..3004544,3004656..3004658,
3004791..3004793,3004812..3004814,3004902..3004904,
3005004..3005006))
/gene="fba"
/locus_tag="SF2910"
/note="zinc binding site [ion binding]; other site"
/db_xref="CDD:238476"
misc_feature complement(order(3004533..3004535,3004539..3004541,
3004647..3004649,3004653..3004655,3004659..3004661))
/gene="fba"
/locus_tag="SF2910"
/note="Na+ binding site [ion binding]; other site"
/db_xref="CDD:238476"
gene complement(3005551..3006714)
/gene="pgk"
/locus_tag="SF2911"
/db_xref="GeneID:1025922"
CDS complement(3005551..3006714)
/gene="pgk"
/locus_tag="SF2911"
/note="Code: G; COG: COG0126"
/codon_start=1
/transl_table=11
/product="phosphoglycerate kinase"
/protein_id="NP_708686.2"
/db_xref="GeneID:1025922"
/translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND
VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
misc_feature complement(3005566..3006708)
/gene="pgk"
/locus_tag="SF2911"
/note="phosphoglycerate kinase; Provisional; Region: pgk;
PRK00073"
/db_xref="CDD:234613"
misc_feature complement(order(3006376..3006378,3006538..3006540,
3006607..3006609,3006646..3006648,3006652..3006654))
/gene="pgk"
/locus_tag="SF2911"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238195"
misc_feature complement(order(3005632..3005640,3006172..3006183))
/gene="pgk"
/locus_tag="SF2911"
/note="hinge regions; other site"
/db_xref="CDD:238195"
misc_feature complement(order(3005686..3005694,3005773..3005784,
3005788..3005790,3005794..3005796,3005866..3005868,
3006067..3006069))
/gene="pgk"
/locus_tag="SF2911"
/note="ADP binding site [chemical binding]; other site"
/db_xref="CDD:238195"
misc_feature complement(3005689..3005691)
/gene="pgk"
/locus_tag="SF2911"
/note="catalytic site [active]"
/db_xref="CDD:238195"
gene complement(3006764..3007783)
/gene="epd"
/locus_tag="SF2912"
/db_xref="GeneID:1025918"
CDS complement(3006764..3007783)
/gene="epd"
/locus_tag="SF2912"
/note="Code: G; COG: COG0057"
/codon_start=1
/transl_table=11
/product="erythrose 4-phosphate dehydrogenase"
/protein_id="NP_708687.2"
/db_xref="GeneID:1025918"
/translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
TVAFR"
misc_feature complement(3006782..3007780)
/gene="epd"
/locus_tag="SF2912"
/note="erythrose 4-phosphate dehydrogenase; Provisional;
Region: PRK13535"
/db_xref="CDD:184122"
gene 3008317..3008586
/locus_tag="SF2913"
/db_xref="GeneID:1025925"
CDS 3008317..3008586
/locus_tag="SF2913"
/note="Code: R; COG: COG1661"
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="NP_708688.1"
/db_xref="GeneID:1025925"
/translation="MRYAGQEGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTML
GGHMMPGCTVRTTLELVIGSLEELAFSRQPCALSGYDELHISPVK"
misc_feature <3008317..3008565
/locus_tag="SF2913"
/note="Domain of unknown function found in archaea,
bacteria, and plants; Region: DUF296; cl00720"
/db_xref="CDD:469889"
gene 3008609..3009187
/locus_tag="SF2914"
/db_xref="GeneID:1025218"
CDS 3008609..3009187
/locus_tag="SF2914"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708689.1"
/db_xref="GeneID:1025218"
/translation="MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVSGWLARAGWFRTLPKV
VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
VDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR"
gene 3009188..3009895
/locus_tag="SF2915"
/pseudo
/db_xref="GeneID:1025935"
misc_feature 3009188..3009895
/locus_tag="SF2915"
/note="Similar to Escherichia coli O157:H7 EDL933
conserved hypothetical protein ref: NP_289497.1 (235 aa).
BLAST with identity of 97% in 236 aa. This CDS contains an
in-frame stop codon. The sequence has been checked and is
believed to be correct."
/pseudo
gene 3009883..3010560
/locus_tag="SF2916"
/db_xref="GeneID:1026013"
CDS 3009883..3010560
/locus_tag="SF2916"
/note="Code: P; COG: COG1122"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_708690.2"
/db_xref="GeneID:1026013"
/translation="MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTL
AQLMAGWYPDFLPREITGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVE
EEVAFGPENLCLAEAEIMARIDAALTLTECQPLRHRHPATLSGGETQRVIIACAIAMQ
PKLLILDEAFSRLTPQASEMLLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQN
GALQPLC"
misc_feature 3009958..3010539
/locus_tag="SF2916"
/note="First domain of the ATP-binding cassette component
of cobalt transport system; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:213192"
misc_feature 3009985..3010008
/locus_tag="SF2916"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213192"
misc_feature order(3009994..3009999,3010003..3010011,3010144..3010146,
3010381..3010386,3010486..3010488)
/locus_tag="SF2916"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213192"
misc_feature 3010135..3010146
/locus_tag="SF2916"
/note="Q-loop/lid; other site"
/db_xref="CDD:213192"
misc_feature 3010309..3010338
/locus_tag="SF2916"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213192"
misc_feature 3010369..3010386
/locus_tag="SF2916"
/note="Walker B; other site"
/db_xref="CDD:213192"
misc_feature 3010393..3010404
/locus_tag="SF2916"
/note="D-loop; other site"
/db_xref="CDD:213192"
misc_feature order(3010471..3010482,3010486..3010494)
/locus_tag="SF2916"
/note="H-loop/switch region; other site"
/db_xref="CDD:213192"
gene 3010554..3011231
/locus_tag="SF2917"
/db_xref="GeneID:1025910"
CDS 3010554..3011231
/locus_tag="SF2917"
/note="Code: P; COG: COG1122"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_708691.2"
/db_xref="GeneID:1025910"
/translation="MLTLNKISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
LLRVMAGLLTPTAGTVMLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFG
LKLQKCPADEITQRTHAALQCCQLADTANSHPLDLHNAQRRMVAVACLEALSPPLLLL
DEPSRDFDENWLSVFESWLEKCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGVIRNVN
PPDDIHP"
misc_feature 3010563..3011189
/locus_tag="SF2917"
/note="First domain of the ATP-binding cassette component
of cobalt transport system; Region:
ABC_cobalt_CbiO_domain1; cd03225"
/db_xref="CDD:213192"
misc_feature 3010659..3010682
/locus_tag="SF2917"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213192"
misc_feature order(3010668..3010673,3010677..3010685,3010803..3010805,
3011034..3011039,3011133..3011135)
/locus_tag="SF2917"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:213192"
misc_feature 3010794..3010805
/locus_tag="SF2917"
/note="Q-loop/lid; other site"
/db_xref="CDD:213192"
misc_feature 3010962..3010991
/locus_tag="SF2917"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:213192"
misc_feature 3011022..3011039
/locus_tag="SF2917"
/note="Walker B; other site"
/db_xref="CDD:213192"
misc_feature 3011046..3011057
/locus_tag="SF2917"
/note="D-loop; other site"
/db_xref="CDD:213192"
misc_feature 3011121..3011141
/locus_tag="SF2917"
/note="H-loop/switch region; other site"
/db_xref="CDD:213192"
gene complement(3011203..3011916)
/gene="frcK"
/locus_tag="SF2918"
/db_xref="GeneID:1026822"
CDS complement(3011203..3011916)
/gene="frcK"
/locus_tag="SF2918"
/note="Code: H; COG: COG1072"
/codon_start=1
/transl_table=11
/product="nucleoside triphosphate hydrolase
domain-containing protein"
/protein_id="NP_708692.1"
/db_xref="GeneID:1026822"
/translation="MKIELTVNGLNVQAQYHDEEIERVHKLLLRMLAALQTVNPQRRT
VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQALPMDGFHHYNSWLDAHQLRPFKGA
PETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
WCQLAQFCDFSIFINAPAAALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRGLEES
LPANLTLMMTATGEYRLVD"
misc_feature complement(3011212..3011889)
/gene="frcK"
/locus_tag="SF2918"
/note="nucleoside triphosphate hydrolase domain-containing
protein; Reviewed; Region: PRK09270"
/db_xref="CDD:236442"
misc_feature complement(3011743..3011754)
/gene="frcK"
/locus_tag="SF2918"
/note="active site"
/db_xref="CDD:238977"
gene complement(3011913..3012422)
/gene="yggD"
/locus_tag="SF2919"
/db_xref="GeneID:1026023"
CDS complement(3011913..3012422)
/gene="yggD"
/locus_tag="SF2919"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator"
/protein_id="NP_708693.1"
/db_xref="GeneID:1026023"
/translation="MATLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVD
NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQYWHYLNEQD
ETPGFADDITWDFISNVNSITRNATLYDALKAMKFADFAVWSEARFSGMVKTALTLAV
TTTLKELTP"
misc_feature complement(3011916..3012416)
/gene="yggD"
/locus_tag="SF2919"
/note="putative DNA-binding transcriptional regulator;
Provisional; Region: PRK10022"
/db_xref="CDD:182199"
gene complement(3012444..3013409)
/gene="yggF"
/locus_tag="SF2920"
/pseudogene="unknown"
/db_xref="GeneID:1025929"
gene complement(3013406..3014647)
/locus_tag="SF2921"
/db_xref="GeneID:1025917"
CDS complement(3013406..3014647)
/locus_tag="SF2921"
/note="Code: ER; COG: COG1063"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_708695.3"
/db_xref="GeneID:1025917"
/translation="MESLPEFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVP
DDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSGYSAGYSYEYFGG
NATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYHTTQYVYEHRMGV
KPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVDLAASK
GIELVYVNTKGMSDPIQMLRALTGDVGFDDIFVYAAVPAVVEMADELLAEDGCLNFFA
GLTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQLQPSFMVTHIGGL
DAVPETVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKELARLVEETHGIW
NEQAEKYLLAQFGVDIGEAAQ"
misc_feature complement(3013439..3014644)
/locus_tag="SF2921"
/note="L-sorbose-1-phosphate reductase; Region:
sorbose_phosphate_red; cd08238"
/db_xref="CDD:176200"
misc_feature complement(order(3013736..3013744,3013820..3013825,
3013883..3013885,3013889..3013894,3013967..3013969,
3014042..3014044,3014054..3014059,3014120..3014137,
3014234..3014236,3014246..3014248,3014552..3014554,
3014561..3014569))
/locus_tag="SF2921"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:176200"
misc_feature complement(order(3014246..3014248,3014480..3014482,
3014561..3014563,3014567..3014569))
/locus_tag="SF2921"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176200"
mobile_element complement(3014634..3015401)
/mobile_element_type="insertion sequence:IS1"
gene complement(3014649..3015044)
/gene="insB"
/locus_tag="SF2922"
/db_xref="GeneID:1025898"
CDS complement(3014649..3015044)
/gene="insB"
/locus_tag="SF2922"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708696.1"
/db_xref="GeneID:1025898"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(3014652..3015041)
/gene="insB"
/locus_tag="SF2922"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(3015071..3015346)
/gene="insA"
/locus_tag="SF2923"
/db_xref="GeneID:1026007"
CDS complement(3015071..3015346)
/gene="insA"
/locus_tag="SF2923"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708697.1"
/db_xref="GeneID:1026007"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<3015074..3015325)
/gene="insA"
/locus_tag="SF2923"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3015837..3016745
/locus_tag="SF2924"
/db_xref="GeneID:1025907"
CDS 3015837..3016745
/locus_tag="SF2924"
/codon_start=1
/transl_table=11
/product="serine protease"
/protein_id="NP_708698.1"
/db_xref="GeneID:1025907"
/translation="MKAPVSLTSFRPQKSLAIAIGVLAVVVLPFLSYYTVNEGERGIL
LRYGKIVKVAEPGLGFKIPFMESVEKISTRNQAVVYQGLQAYSRDQQPAQMTVSVSFH
IKPSEAGAVYTTYNTIEALKDRLIVRQLPTQLENIFGQYTAISAVQDRTKLVQDLQNA
MRKAVVGPVVIDGVQIENIDFSDAYEKSIENRMKAEVAIATRKQNLETEKIQAQIAVT
QAQAEADSKLAAAKAEAETIRVRGAAEAETIRLKSAAEAEAIRLRGEALRDNPGLVAL
TTAERWDGKLPDTMIPGSTVPFISTK"
misc_feature 3015933..3016514
/locus_tag="SF2924"
/note="Prohibitin family; SPFH (stomatin, prohibitin,
flotillin, and HflK/C) superfamily; Region:
SPFH_prohibitin; cd03401"
/db_xref="CDD:259799"
gene complement(3016791..3018782)
/gene="tktA"
/locus_tag="SF2925"
/db_xref="GeneID:1025939"
CDS complement(3016791..3018782)
/gene="tktA"
/locus_tag="SF2925"
/note="Code: G; COG: COG0021"
/codon_start=1
/transl_table=11
/product="transketolase"
/protein_id="NP_708699.2"
/db_xref="GeneID:1025939"
/translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
LNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKALL"
misc_feature complement(3016794..3018782)
/gene="tktA"
/locus_tag="SF2925"
/note="Transketolase [Carbohydrate transport and
metabolism]; Region: TktA; COG0021"
/db_xref="CDD:439792"
gene 3018934..3019818
/gene="yggG"
/locus_tag="SF2926"
/db_xref="GeneID:1025881"
CDS 3018934..3019818
/gene="yggG"
/locus_tag="SF2926"
/note="Code: O; COG: COG0501"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708700.2"
/db_xref="GeneID:1025881"
/translation="MLACCAICSPVRCAFPYTETERRFTCKRRIFRIILTLCGRENMK
IRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKA
TIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDM
MTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGDLG
EKLVNSQFSQRQEAEADDYSYDLLHQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPA
SAERAQHIRDRISADGIK"
misc_feature 3019147..3019794
/gene="yggG"
/locus_tag="SF2926"
/note="Peptidase M48C Ste24p loiP-like, integral membrane
protein; Region: M48C_loiP_like; cd07334"
/db_xref="CDD:320693"
misc_feature order(3019447..3019452,3019459..3019461,3019624..3019626,
3019636..3019638,3019753..3019755)
/gene="yggG"
/locus_tag="SF2926"
/note="putative active site [active]"
/db_xref="CDD:320693"
misc_feature order(3019447..3019449,3019459..3019461,3019624..3019626,
3019753..3019755)
/gene="yggG"
/locus_tag="SF2926"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:320693"
gene complement(3020024..3020944)
/gene="speB"
/locus_tag="SF2927"
/db_xref="GeneID:1025911"
CDS complement(3020024..3020944)
/gene="speB"
/locus_tag="SF2927"
/note="Code: E; COG: COG0010"
/codon_start=1
/transl_table=11
/product="agmatinase"
/protein_id="NP_708701.1"
/db_xref="GeneID:1025911"
/translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ
IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
PAYDQSEITALAAATLALEMLYIQAAKKGE"
misc_feature complement(3020027..3020926)
/gene="speB"
/locus_tag="SF2927"
/note="agmatinase; Provisional; Region: PRK02190"
/db_xref="CDD:235011"
misc_feature complement(order(3020123..3020125,3020249..3020251,
3020255..3020257,3020453..3020458,3020486..3020494,
3020498..3020500,3020567..3020569))
/gene="speB"
/locus_tag="SF2927"
/note="putative active site [active]"
/db_xref="CDD:212538"
gene complement(3021080..3021454)
/locus_tag="SF2928"
/db_xref="GeneID:1026022"
CDS complement(3021080..3021454)
/locus_tag="SF2928"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708702.2"
/db_xref="GeneID:1026022"
/translation="MNYQLYVRNYSRNTNYEIVATADGLDVLNGKQGSLNNNGYIVNA
GDSLVIKGFRKDKHTEAAFQFANVADSYAANSAQGDVRNTGVIGFAAFELQGPAQNAL
PPCSGQAFPADNNGYAPPPCRK"
mobile_element complement(3021465..3022228)
/mobile_element_type="insertion sequence:IS1"
gene complement(3021480..3021875)
/gene="insB"
/locus_tag="SF2929"
/db_xref="GeneID:1025992"
CDS complement(3021480..3021875)
/gene="insB"
/locus_tag="SF2929"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708703.1"
/db_xref="GeneID:1025992"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKPLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(3021483..3021872)
/gene="insB"
/locus_tag="SF2929"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(3021902..3022177)
/gene="insA"
/locus_tag="SF2930"
/db_xref="GeneID:1025945"
CDS complement(3021902..3022177)
/gene="insA"
/locus_tag="SF2930"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708704.1"
/db_xref="GeneID:1025945"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<3021905..3022156)
/gene="insA"
/locus_tag="SF2930"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(3022206..3024212)
/gene="speA"
/locus_tag="SF2931"
/db_xref="GeneID:1026003"
CDS complement(3022206..3024212)
/gene="speA"
/locus_tag="SF2931"
/note="Code: E; COG: COG1166"
/codon_start=1
/transl_table=11
/product="arginine decarboxylase"
/protein_id="NP_708705.1"
/db_xref="GeneID:1026003"
/translation="MRFAMSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYN
IAWWGNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQH
RLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELM
AVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLN
VVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFH
LGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNY
GLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPT
APVEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERA
WAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQL
FPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGF
FMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTL
LTQFRDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDDAANLLI"
misc_feature complement(3022227..3024137)
/gene="speA"
/locus_tag="SF2931"
/note="biosynthetic arginine decarboxylase; Region:
PRK05354"
/db_xref="CDD:235427"
misc_feature complement(order(3022467..3022475,3022482..3022490,
3022608..3022610,3022614..3022622,3022626..3022628,
3022728..3022730,3022737..3022739,3022743..3022745,
3022749..3022751,3022764..3022766,3023064..3023072,
3023469..3023480,3023586..3023588,3023598..3023600,
3023610..3023612,3023670..3023672,3023739..3023744,
3023748..3023753,3023820..3023822,3023943..3023945))
/gene="speA"
/locus_tag="SF2931"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143503"
misc_feature complement(order(3022473..3022475,3022485..3022487,
3022497..3022499,3022614..3022619,3023112..3023123,
3023265..3023270,3023376..3023378,3023385..3023387,
3023535..3023537,3023685..3023687,3023757..3023759,
3023820..3023822,3023826..3023828))
/gene="speA"
/locus_tag="SF2931"
/note="active site"
/db_xref="CDD:143503"
misc_feature complement(order(3022497..3022499,3022617..3022619,
3023112..3023123,3023265..3023270,3023376..3023378,
3023385..3023387,3023535..3023537,3023685..3023687,
3023757..3023759,3023820..3023822,3023826..3023828))
/gene="speA"
/locus_tag="SF2931"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143503"
misc_feature complement(order(3022617..3022619,3023820..3023822))
/gene="speA"
/locus_tag="SF2931"
/note="catalytic residues [active]"
/db_xref="CDD:143503"
misc_feature complement(order(3022473..3022475,3022485..3022487,
3022497..3022499,3022614..3022619,3023112..3023114,
3023376..3023378))
/gene="speA"
/locus_tag="SF2931"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143503"
gene complement(3024209..3024355)
/gene="yqgB"
/locus_tag="SF2932"
/db_xref="GeneID:1025957"
CDS complement(3024209..3024355)
/gene="yqgB"
/locus_tag="SF2932"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708706.1"
/db_xref="GeneID:1025957"
/translation="MLNNVMKKKPVAQSERQHTLLENPCAYGLLSQFQAATVVNCFTL
NKII"
misc_feature complement(3024212..3024340)
/gene="yqgB"
/locus_tag="SF2932"
/note="Virulence promoting factor; Region: YqgB; cl12603"
/db_xref="CDD:416600"
gene complement(3024688..3024939)
/locus_tag="SF2932a"
/db_xref="GeneID:16608354"
CDS complement(3024688..3024939)
/locus_tag="SF2932a"
/codon_start=1
/transl_table=11
/product="membrane protein"
/protein_id="YP_008439278.1"
/db_xref="GeneID:16608354"
/translation="MVADPTTTLQVKNTGSLSVNRYGWINIWMAILGQFFTRFPLFFE
SCLILLKTWLEIFPDNAGILRIYLLQFSAIVGYKTRRAA"
gene 3024995..3026149
/gene="metK"
/locus_tag="SF2933"
/db_xref="GeneID:1025940"
CDS 3024995..3026149
/gene="metK"
/locus_tag="SF2933"
/note="Code: H; COG: COG0192"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine synthetase"
/protein_id="NP_708707.2"
/db_xref="GeneID:1025940"
/translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
SATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK"
misc_feature 3025001..3026140
/gene="metK"
/locus_tag="SF2933"
/note="S-adenosylmethionine synthetase [Coenzyme transport
and metabolism]; Region: MetK; COG0192"
/db_xref="CDD:439962"
gene 3026625..3027980
/gene="galP"
/locus_tag="SF2934"
/db_xref="GeneID:1025946"
CDS 3026625..3027980
/gene="galP"
/locus_tag="SF2934"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="MFS family galactose:proton symporter"
/protein_id="NP_708708.2"
/db_xref="GeneID:1025946"
/translation="MTFFVCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWV
VSSMMFGAAVGAVGIGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLL
GLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWM
LGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRES
LQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQ
MWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSA
QYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATF
LTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERNLMKGRKLREIGAH
D"
misc_feature 3026625..3027926
/gene="galP"
/locus_tag="SF2934"
/note="MFS transporter, sugar porter (SP) family; Region:
SP; TIGR00879"
/db_xref="CDD:273317"
misc_feature order(3026670..3026672,3026682..3026684,3027024..3027026,
3027033..3027038,3027045..3027047,3027369..3027374,
3027384..3027389,3027396..3027401,3027483..3027485,
3027669..3027674,3027681..3027686,3027696..3027698,
3027765..3027770,3027777..3027779)
/gene="galP"
/locus_tag="SF2934"
/note="chemical substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:340873"
gene 3028057..3028554
/gene="sprT"
/locus_tag="SF2935"
/db_xref="GeneID:1025996"
CDS 3028057..3028554
/gene="sprT"
/locus_tag="SF2935"
/note="Code: S; COG: COG3091"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708709.1"
/db_xref="GeneID:1025996"
/translation="MKISRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
MESVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAIYRCVHCGE
QLVAK"
misc_feature 3028084..3028551
/gene="sprT"
/locus_tag="SF2935"
/note="SprT family zinc-dependent metalloprotease; Region:
PRK04860"
/db_xref="CDD:179886"
gene 3028649..3029356
/gene="endA"
/locus_tag="SF2936"
/db_xref="GeneID:1024412"
CDS 3028649..3029356
/gene="endA"
/locus_tag="SF2936"
/note="Code: L; COG: COG2356"
/codon_start=1
/transl_table=11
/product="DNA-specific endonuclease I"
/protein_id="NP_708710.2"
/db_xref="GeneID:1024412"
/translation="MYRYLSIAAVVLSAAFSGPTLAEGINSFSQAKAAAVKVHADAPG
TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
QGNHNPYVQRACQARKS"
misc_feature 3028649..3029353
/gene="endA"
/locus_tag="SF2936"
/note="DNA-specific endonuclease I; Provisional; Region:
PRK15137"
/db_xref="CDD:185091"
gene 3029436..3030167
/gene="yggJ"
/locus_tag="SF2937"
/db_xref="GeneID:1025941"
CDS 3029436..3030167
/gene="yggJ"
/locus_tag="SF2937"
/note="Code: S; COG: COG1385"
/codon_start=1
/transl_table=11
/product="16S ribosomal RNA methyltransferase RsmE"
/protein_id="NP_708711.2"
/db_xref="GeneID:1025941"
/translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
GSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
PRVLRTETTALTAITALQVRFGDLG"
misc_feature 3029439..3030161
/gene="yggJ"
/locus_tag="SF2937"
/note="RNA methyltransferase, RsmE family; Region:
TIGR00046"
/db_xref="CDD:272873"
gene 3030180..3031130
/gene="gshB"
/locus_tag="SF2938"
/db_xref="GeneID:1023882"
CDS 3030180..3031130
/gene="gshB"
/locus_tag="SF2938"
/note="Code: HJ; COG: COG0189"
/codon_start=1
/transl_table=11
/product="glutathione synthetase"
/protein_id="NP_708712.1"
/db_xref="GeneID:1023882"
/translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYIL
ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTCYCMAQNYLPAIKDGDKRVLVVDGEP
VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
misc_feature 3030180..3031127
/gene="gshB"
/locus_tag="SF2938"
/note="glutathione synthetase; Provisional; Region:
PRK05246"
/db_xref="CDD:235371"
gene 3031167..3031802
/gene="yqgE"
/locus_tag="SF2939"
/db_xref="GeneID:1026000"
CDS 3031167..3031802
/gene="yqgE"
/locus_tag="SF2939"
/note="Code: K; COG: COG1678"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708713.3"
/db_xref="GeneID:1026000"
/translation="MTAPFFPRILGAVAFLNQETEPLTMNLQHHFLIAMPALQDPIFR
RSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPL
AEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKG
QLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA"
misc_feature 3031230..3031799
/gene="yqgE"
/locus_tag="SF2939"
/note="YqgE/AlgH family protein; Region: PRK00228"
/db_xref="CDD:234694"
gene 3031802..3032218
/gene="yqgF"
/locus_tag="SF2940"
/db_xref="GeneID:1025943"
CDS 3031802..3032218
/gene="yqgF"
/locus_tag="SF2940"
/note="Code: L; COG: COG0816"
/codon_start=1
/transl_table=11
/product="Holliday junction resolvase-like protein"
/protein_id="NP_708714.1"
/db_xref="GeneID:1025943"
/translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
misc_feature 3031802..3032209
/gene="yqgF"
/locus_tag="SF2940"
/note="Holliday junction resolvase RuvX; Region: PRK00109"
/db_xref="CDD:234639"
misc_feature order(3031832..3031840,3031901..3031903,3031985..3031993,
3032015..3032020,3032090..3032092,3032156..3032158)
/gene="yqgF"
/locus_tag="SF2940"
/note="putative nucleic acid substrate binding site
[nucleotide binding]; other site"
/db_xref="CDD:438564"
misc_feature order(3031874..3031882,3032147..3032149,3032159..3032161,
3032168..3032173,3032180..3032185,3032192..3032194,
3032204..3032206)
/gene="yqgF"
/locus_tag="SF2940"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:438564"
gene complement(3032394..3033419)
/gene="yggR"
/locus_tag="SF2942"
/db_xref="GeneID:1025948"
CDS complement(3032394..3033419)
/gene="yggR"
/locus_tag="SF2942"
/note="Code: N; COG: COG2805"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708715.2"
/db_xref="GeneID:1025948"
/translation="MPGYAQYRSFSEDLSMNMEEIVALSVKHNVSDLHLCSAWPARWR
IRGRMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRQ
GISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLN
QHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELR
DSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVL
SQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQKVGMLTFQQSYQQ
RVGEGRL"
misc_feature complement(3032397..3033371)
/gene="yggR"
/locus_tag="SF2942"
/note="Members of the P-loop NTPase domain superfamily are
characterized by a conserved nucleotide phosphate-binding
motif, also referred to as the Walker A motif
(GxxxxGK[S/T], where x is any residue), and the Walker B
motif (hhhh[D/E], where h is a...; Region: P-loop
containing Nucleoside Triphosphate Hydrolases; cl38936"
/db_xref="CDD:476819"
misc_feature complement(order(3032550..3032552,3032556..3032558,
3032580..3032582,3032697..3032699,3032895..3032897,
3032970..3032993,3033057..3033059))
/gene="yggR"
/locus_tag="SF2942"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:410875"
misc_feature complement(order(3032502..3032504,3032511..3032513,
3032610..3032612,3032622..3032624,3032631..3032633,
3032724..3032729,3032790..3032792,3032796..3032804,
3032811..3032813,3032823..3032825,3032841..3032843,
3032853..3032870,3032886..3032891,3032898..3032900,
3032922..3032927,3032988..3032993))
/gene="yggR"
/locus_tag="SF2942"
/note="hexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:410875"
gene 3033392..3034096
/gene="yggS"
/locus_tag="SF2941"
/db_xref="GeneID:1026823"
CDS 3033392..3034096
/gene="yggS"
/locus_tag="SF2941"
/note="Code: R; COG: COG0325"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708716.1"
/db_xref="GeneID:1026823"
/translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA
EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
IDRLRIATRLNEQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
RGLMAIPALESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
VRIGTAIFGARDYSKK"
misc_feature 3033398..3034075
/gene="yggS"
/locus_tag="SF2941"
/note="Pyridoxal 5-phosphate (PLP)-binding TIM barrel
domain of Type III PLP-Dependent Enzymes, Yggs-like
proteins; Region: PLPDE_III_Yggs_like; cd06824"
/db_xref="CDD:143497"
misc_feature order(3033491..3033493,3033497..3033499,3033560..3033562,
3033635..3033637,3033887..3033889,3034001..3034003,
3034049..3034051,3034055..3034060)
/gene="yggS"
/locus_tag="SF2941"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143497"
misc_feature 3033497..3033499
/gene="yggS"
/locus_tag="SF2941"
/note="catalytic residue [active]"
/db_xref="CDD:143497"
gene 3034114..3034680
/gene="yggT"
/locus_tag="SF2943"
/db_xref="GeneID:1026030"
CDS 3034114..3034680
/gene="yggT"
/locus_tag="SF2943"
/note="Code: S; COG: COG0762"
/codon_start=1
/transl_table=11
/product="resistance protein"
/protein_id="NP_708717.1"
/db_xref="GeneID:1026030"
/translation="MNTLTFLLSTVIELYTMVLLLRIWMQCAHCDFYTPFSQFVVKVA
QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFEVVTFLPIIWIAGLLILLKTI
GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
LLYAINMGVAEVLQATGNMLLPGLWMAL"
misc_feature 3034138..3034347
/gene="yggT"
/locus_tag="SF2943"
/note="YGGT family; Region: YGGT; pfam02325"
/db_xref="CDD:460533"
misc_feature 3034387..3034635
/gene="yggT"
/locus_tag="SF2943"
/note="Cytochrome b6 maturation protein CCB3/Ycf19 and
related maturases, YggT family [Posttranslational
modification, protein turnover, chaperones]; Region:
Ycf19; COG0762"
/db_xref="CDD:440525"
gene 3034665..3034967
/gene="yggU"
/locus_tag="SF2944"
/db_xref="GeneID:1026326"
CDS 3034665..3034967
/gene="yggU"
/locus_tag="SF2944"
/note="Code: S; COG: COG1872"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708718.3"
/db_xref="GeneID:1026326"
/translation="MDGVMSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITA
PPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
misc_feature 3034677..3034961
/gene="yggU"
/locus_tag="SF2944"
/note="hypothetical protein; Validated; Region: PRK05090"
/db_xref="CDD:179931"
gene 3034975..3035568
/gene="yggV"
/locus_tag="SF2945"
/db_xref="GeneID:1025936"
CDS 3034975..3035568
/gene="yggV"
/locus_tag="SF2945"
/note="Code: F; COG: COG0127"
/codon_start=1
/transl_table=11
/product="dITP/XTP pyrophosphatase"
/protein_id="NP_708719.1"
/db_xref="GeneID:1025936"
/translation="MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGL
TFIENAILKARHAAKVTGLPAIADDSGLAVDALGGAPGIYSARYSGEDATDQKNLQKL
LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
misc_feature 3034978..3035565
/gene="yggV"
/locus_tag="SF2945"
/note="dITP/XTP pyrophosphatase; Reviewed; Region:
PRK00120"
/db_xref="CDD:234648"
misc_feature order(3035002..3035004,3035008..3035013,3035020..3035022,
3035182..3035190,3035227..3035232,3035326..3035328,
3035434..3035436,3035440..3035445,3035518..3035523)
/gene="yggV"
/locus_tag="SF2945"
/note="active site"
/db_xref="CDD:238285"
misc_feature order(3035095..3035103,3035203..3035208,3035215..3035217,
3035224..3035226,3035233..3035235)
/gene="yggV"
/locus_tag="SF2945"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238285"
gene 3035561..3036697
/gene="yggW"
/locus_tag="SF2946"
/db_xref="GeneID:1025947"
CDS 3035561..3036697
/gene="yggW"
/locus_tag="SF2946"
/note="Code: H; COG: COG0635"
/codon_start=1
/transl_table=11
/product="HemN family oxidoreductase"
/protein_id="NP_708720.1"
/db_xref="GeneID:1025947"
/translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
CDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLC
EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE"
misc_feature 3035561..3036694
/gene="yggW"
/locus_tag="SF2946"
/note="Coproporphyrinogen-III oxidase HemN
(oxygen-independent) or related Fe-S oxidoreductase
[Coenzyme transport and metabolism]; Region: HemN;
COG0635"
/db_xref="CDD:440400"
misc_feature 3036652..3040655
/note="SI#48"
gene 3037011..3037974
/locus_tag="SF2947"
/pseudogene="unknown"
/db_xref="GeneID:1026497"
gene 3038019..3038522
/locus_tag="SF2949"
/db_xref="GeneID:1025942"
CDS 3038019..3038522
/locus_tag="SF2949"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708723.2"
/db_xref="GeneID:1025942"
/translation="MIFNRLKLAVDRVIATFSVAVMLALVVCVVWQVFSRYVLNQPST
LTDELARFLMIWVGLLGAAYTVGAQRHLSIDLFALALNKRKQLLLSIVINVLILGFAG
SVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGVVMMFYALCFINQSIQQLK
QPAQEAS"
misc_feature 3038022..3038465
/locus_tag="SF2949"
/note="TRAP-type C4-dicarboxylate transport system, small
permease component YiaM [Carbohydrate transport and
metabolism]; Region: DctM; COG3090"
/db_xref="CDD:442324"
mobile_element complement(3038530..3039297)
/mobile_element_type="insertion sequence:IS1"
gene complement(3038545..3038940)
/gene="insB"
/locus_tag="SF2950"
/db_xref="GeneID:1025949"
CDS complement(3038545..3038940)
/gene="insB"
/locus_tag="SF2950"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708724.1"
/db_xref="GeneID:1025949"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(3038548..3038937)
/gene="insB"
/locus_tag="SF2950"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(3038967..3039242)
/gene="insA"
/locus_tag="SF2951"
/db_xref="GeneID:1026173"
CDS complement(3038967..3039242)
/gene="insA"
/locus_tag="SF2951"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708725.1"
/db_xref="GeneID:1026173"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<3038970..3039221)
/gene="insA"
/locus_tag="SF2951"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3039299..3040600
/locus_tag="SF2952"
/db_xref="GeneID:1025938"
CDS 3039299..3040600
/locus_tag="SF2952"
/note="Code: S; COG: COG1593"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708726.2"
/db_xref="GeneID:1025938"
/translation="MDSYIAITLFGCFFVLVFIGVPISFSIGIATVASMLLMFPWDIA
AITVSQRLANGLDNFALLAIPFFIFAGTLMNSGGIAIRLINLAQVMVGRVPGSLGHVN
VLANMMFGSISGSAVAAAAAVGGTLNPIQTKEGYDPAFSTAVNVSSCITGLLIPPSNV
LIVFSLTAGGVSVASLFMAGYLPGILMGLAVMIVCGIIAKRRGYPLSERATFAQACKA
FLDALPSLLLVFIVMGGILGGIFTATEASAIAVVYTFILSVLIYREVKWRHLPKLILE
SVVTTSIVLLLIGFSVGMSWAMTNADIPYMISDALMGISDNPLIILLLINIVLLIVGI
FMDMTPAVLIFTPIFLPIAQELGMDPVHFGIMMVANLCIGLLTPPVGSALFVGCSISG
VKIQHLIKPLLLFYAALLVALMMITYIPQISLFIPQLLGLM"
misc_feature 3039311..3040594
/locus_tag="SF2952"
/note="TRAP-type C4-dicarboxylate transport system, large
permease component [Carbohydrate transport and
metabolism]; Region: DctQ; COG1593"
/db_xref="CDD:441201"
gene complement(3040701..3041663)
/gene="yggM"
/locus_tag="SF2953"
/db_xref="GeneID:1026312"
CDS complement(3040701..3041663)
/gene="yggM"
/locus_tag="SF2953"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708727.2"
/db_xref="GeneID:1026312"
/translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK
LDAISLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM
LTSKGTPASGWSVNFYSFQAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNK
QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANER"
misc_feature complement(3040704..3041624)
/gene="yggM"
/locus_tag="SF2953"
/note="Protein of unknown function (DUF1202); Region:
DUF1202; pfam06717"
/db_xref="CDD:284194"
gene complement(3041780..3042826)
/gene="ansB"
/locus_tag="SF2954"
/db_xref="GeneID:1025950"
CDS complement(3041780..3042826)
/gene="ansB"
/locus_tag="SF2954"
/note="Code: EJ; COG: COG0252"
/codon_start=1
/transl_table=11
/product="L-asparaginase II"
/protein_id="NP_708728.1"
/db_xref="GeneID:1025950"
/translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINADCDKT
DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF
DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
TKDPQQIQQIFNQY"
misc_feature complement(3041783..3042823)
/gene="ansB"
/locus_tag="SF2954"
/note="L-asparaginase II; Provisional; Region: ansB;
PRK11096"
/db_xref="CDD:182958"
misc_feature complement(order(3042275..3042277,3042419..3042421,
3042491..3042499,3042584..3042589,3042725..3042730))
/gene="ansB"
/locus_tag="SF2954"
/note="active site"
/db_xref="CDD:199205"
misc_feature complement(order(3041852..3041854,3041861..3041866,
3041930..3041935,3041948..3041950,3042011..3042013,
3042017..3042019,3042023..3042031,3042035..3042037,
3042059..3042061,3042068..3042073,3042080..3042085,
3042089..3042091,3042101..3042109,3042113..3042121,
3042263..3042277,3042416..3042418,3042479..3042481,
3042488..3042493,3042563..3042565,3042572..3042586,
3042590..3042592))
/gene="ansB"
/locus_tag="SF2954"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:199205"
gene complement(3043002..3043718)
/gene="yggN"
/locus_tag="SF2955"
/db_xref="GeneID:1025933"
CDS complement(3043002..3043718)
/gene="yggN"
/locus_tag="SF2955"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708729.2"
/db_xref="GeneID:1025933"
/translation="MRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGEN
GNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALD
KIIVQEMGDSSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVN
QAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKD
VCSRVVTLEDSRKALVGNLK"
misc_feature complement(3043005..3043718)
/gene="yggN"
/locus_tag="SF2955"
/note="hypothetical protein; Provisional; Region:
PRK10626"
/db_xref="CDD:182597"
gene complement(3043905..3044261)
/gene="yggL"
/locus_tag="SF2956"
/db_xref="GeneID:1026362"
CDS complement(3043905..3044261)
/gene="yggL"
/locus_tag="SF2956"
/note="Code: S; COG: COG3171"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708730.3"
/db_xref="GeneID:1026362"
/translation="MGLNVREGEIMAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTS
EEQIDKIVDDFINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEEC
KLDEVRTSELFDVWWD"
misc_feature complement(3043908..3044231)
/gene="yggL"
/locus_tag="SF2956"
/note="hypothetical protein; Provisional; Region:
PRK11702"
/db_xref="CDD:183281"
gene complement(3044231..3044950)
/gene="trmB"
/locus_tag="SF2957"
/db_xref="GeneID:1026825"
CDS complement(3044231..3044950)
/gene="trmB"
/locus_tag="SF2957"
/note="Code: R; COG: COG0220"
/codon_start=1
/transl_table=11
/product="tRNA (guanine-N(7)-)-methyltransferase"
/protein_id="NP_708731.1"
/db_xref="GeneID:1026825"
/translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
CLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
FEQRGHRLGHGVWDLMFERVK"
misc_feature complement(3044243..3044863)
/gene="trmB"
/locus_tag="SF2957"
/note="tRNA G46 N7-methylase TrmB [Translation, ribosomal
structure and biogenesis]; Region: TrmB; COG0220"
/db_xref="CDD:439990"
gene 3045111..3046163
/gene="mutY"
/locus_tag="SF2958"
/db_xref="GeneID:1026355"
CDS 3045111..3046163
/gene="mutY"
/locus_tag="SF2958"
/note="Code: L; COG: COG1194"
/codon_start=1
/transl_table=11
/product="A/G-specific adenine glycosylase"
/protein_id="NP_708732.2"
/db_xref="GeneID:1026355"
/translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
VATVIPYFERFMAHFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAATNNSWSL
YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRHWLAQ
RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
APVERLLQQLRTGAPV"
misc_feature 3045111..3046160
/gene="mutY"
/locus_tag="SF2958"
/note="adenine DNA glycosylase; Region: PRK10880"
/db_xref="CDD:182805"
gene 3046191..3046466
/gene="yggX"
/locus_tag="SF2959"
/db_xref="GeneID:1026548"
CDS 3046191..3046466
/gene="yggX"
/locus_tag="SF2959"
/note="Code: S; COG: COG2924"
/codon_start=1
/transl_table=11
/product="oxidative damage protection protein"
/protein_id="NP_708733.1"
/db_xref="GeneID:1026548"
/translation="MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
misc_feature 3046191..3046460
/gene="yggX"
/locus_tag="SF2959"
/note="oxidative damage protection protein; Provisional;
Region: PRK05408"
/db_xref="CDD:180059"
gene 3046528..3047610
/gene="mltC"
/locus_tag="SF2960"
/db_xref="GeneID:1026499"
CDS 3046528..3047610
/gene="mltC"
/locus_tag="SF2960"
/note="Code: M; COG: COG0741"
/codon_start=1
/transl_table=11
/product="murein transglycosylase C"
/protein_id="NP_708734.1"
/db_xref="GeneID:1026499"
/translation="MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQ
FAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRR
AIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLL
KNRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTE
SSFNPYAVSRSDALGLMQVVQNTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLA
MLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTL
TTRHPSAESRRYLYKVNTAQKSYRRR"
misc_feature 3046531..3047607
/gene="mltC"
/locus_tag="SF2960"
/note="membrane-bound lytic murein transglycosylase MltC;
Region: mltC; PRK11671"
/db_xref="CDD:183271"
gene 3047764..3049068
/gene="nupG"
/locus_tag="SF2961"
/db_xref="GeneID:1027502"
CDS 3047764..3049068
/gene="nupG"
/locus_tag="SF2961"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="nucleosides permease"
/protein_id="NP_708735.1"
/db_xref="GeneID:1027502"
/translation="MCFFKHSSASRCEEINMNLKLQLKILSFLQFCLWGSWLTTLGSY
MFVTLKFDGASIGAVYSSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMA
AQVTTPEAMFLVILINSFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFI
MAMWVVSLSGFELSHMQLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAF
ALFKNKRMAIFFIFSMLLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSIS
QISETLFILTIPFFLSRYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVY
GCAFDFFNISGSVFVEKEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNG
ITDWQTVWLIFAGYSVVLAFAFMAMFKYKHVRVPTGTQTVSH"
misc_feature 3047812..3049065
/gene="nupG"
/locus_tag="SF2961"
/note="nucleoside transporter; Region: 2A0110; TIGR00889"
/db_xref="CDD:129967"
misc_feature order(3047851..3047856,3047863..3047868,3047875..3047877,
3047974..3047976,3048127..3048132,3048136..3048144,
3048151..3048153,3048217..3048219,3048226..3048231,
3048238..3048240,3048460..3048462,3048469..3048474,
3048481..3048489,3048496..3048498,3048601..3048603,
3048613..3048615,3048772..3048777,3048787..3048789,
3048799..3048801,3048847..3048849,3048856..3048861,
3048868..3048873,3048880..3048882)
/gene="nupG"
/locus_tag="SF2961"
/note="putative chemical substrate binding pocket
[chemical binding]; other site"
/db_xref="CDD:340866"
gene complement(3049117..3051312)
/gene="speC"
/locus_tag="SF2962"
/db_xref="GeneID:1025998"
CDS complement(3049117..3051312)
/gene="speC"
/locus_tag="SF2962"
/note="Code: E; COG: COG1982"
/codon_start=1
/transl_table=11
/product="ornithine decarboxylase"
/protein_id="NP_708736.2"
/db_xref="GeneID:1025998"
/translation="MGQGFPPCPVFLLPRNGFALMKSMNIAASSELVSRLSSHRRVVA
LGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNE
QQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYD
FFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVV
TNALLTRGDLVLFDRNNHKSNHHGALIQAGTTPVYLEASRNPFGFIGGIDAHCFNEEY
LRQQIRDVAPEKADLPRPFRLTIIQLGTYDGTVYNARQVIDTIGHLCDYILFDSAWVG
YEQFISMMADSSPLLLELNENDPGIFVTQLVHKQQAGFSQTSQIHKKDNHIRGQARFC
PHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELGIESRKAILAR
CKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKL
LLTTPGINAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAESHEKLAQ
LVAMLAQFEQHIEDDSSLAEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDVKDLQ
KAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLCVVPG
EVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK"
misc_feature complement(3049120..3051252)
/gene="speC"
/locus_tag="SF2962"
/note="ornithine decarboxylase; Provisional; Region:
PRK13578"
/db_xref="CDD:237434"
gene 3051650..3052357
/gene="yqgA"
/locus_tag="SF2963"
/db_xref="GeneID:1026404"
CDS 3051650..3052357
/gene="yqgA"
/locus_tag="SF2963"
/note="Code: R; COG: COG1811"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708737.1"
/db_xref="GeneID:1026404"
/translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLG
IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESF
IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
SIPLLIIQLTLAWAAALILPLITPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
ALLLAMPLSAAWTAWFA"
misc_feature 3051650..3052348
/gene="yqgA"
/locus_tag="SF2963"
/note="Uncharacterized membrane protein YqgA, affects
biofilm formation [Function unknown]; Region: YqgA;
COG1811"
/db_xref="CDD:441416"
gene 3052463..3052538
/locus_tag="SF4507"
/db_xref="GeneID:3161811"
tRNA 3052463..3052538
/locus_tag="SF4507"
/product="tRNA-Phe"
/codon_recognized="UUC"
/db_xref="GeneID:3161811"
gene 3052736..3053998
/locus_tag="SF2964"
/db_xref="GeneID:1026309"
CDS 3052736..3053998
/locus_tag="SF2964"
/note="Code: L; COG: COG0582"
/codon_start=1
/transl_table=11
/product="P4-type integrase"
/protein_id="NP_708738.1"
/db_xref="GeneID:1026309"
/translation="MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRI
LGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLSFEHIA
RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEI
ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALELSRLPELLSRIDG
YKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGS
KMRTPHLVPLSKQVVAILAELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDT
TQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLML
QWWADFLDANREKGISPFEYAKINNPLK"
misc_feature 3052739..3053953
/locus_tag="SF2964"
/note="Integrase/recombinase, includes phage integrase
[Replication, recombination and repair, Mobilome:
prophages, transposons]; Region: FimB; COG0582"
/db_xref="CDD:440347"
gene 3054451..3057966
/locus_tag="SF2965"
/db_xref="GeneID:1026317"
CDS 3054451..3057966
/locus_tag="SF2965"
/codon_start=1
/transl_table=11
/product="superfamily I DNA helicase"
/protein_id="NP_708739.1"
/db_xref="GeneID:1026317"
/translation="MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGR
LDEAIVSKFFEGEKDDVETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSR
EGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETD
EEREARYAALQQEWRQYLYDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASS
HILSLYDHLLVCNKDVPLFNRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQR
DALSHFLDARHGDILAVNGPPGTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQ
AVTNIIEAFGKDFSQGSGAMAGRWLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVE
SKEYVEDALLFYLEKAKAAFPGKECSSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQ
IRAARELIANDIEQYLDNLNKLLSGQEQKVTLLKSAKTEWKKYRAGESLIYSLFSWLP
AVRNKRQYQIQLFLEDKLGALIAGNQWSDPETIERNIDGLLNSAEREQTTYRQQIDSA
HEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQADELADTQIRFPAFLLTTHYWEGRW
LMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKF
EKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVIGDTEQIPPIWSIAPAIDVGN
MLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQFASRYQYDPELARGMYLYE
HRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHIDGKGELASSGSRYNLLE
AETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVLGKQDISTGTNEKSL
TVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAKDSFLVFGDMDLF
EVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVEQHDNFLNQTF
ENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEHNDFEKRKE
KQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREARYERYDT
SMVYCGDNLKGEIEAIYNSLERRQV"
misc_feature 3054919..3057414
/locus_tag="SF2965"
/note="Superfamily I DNA and/or RNA helicase [Replication,
recombination and repair]; Region: DNA2; COG1112"
/db_xref="CDD:440729"
misc_feature 3057511..3057957
/locus_tag="SF2965"
/note="C-terminal domain of Escherichia coli
uncharacterized protein yjhR and similar proteins; Region:
PLDc_yjhR_C_like; cd09118"
/db_xref="CDD:197217"
misc_feature order(3057790..3057792,3057796..3057798,3057835..3057837,
3057841..3057843,3057883..3057885)
/locus_tag="SF2965"
/note="putative active site [active]"
/db_xref="CDD:197217"
misc_feature 3057790..3057792
/locus_tag="SF2965"
/note="catalytic site [active]"
/db_xref="CDD:197217"
mobile_element 3058106..3058321
/note="partial"
/mobile_element_type="insertion sequence:IS600"
gene complement(3059000..3059248)
/locus_tag="SF2967a"
/db_xref="GeneID:16608355"
CDS complement(3059000..3059248)
/locus_tag="SF2967a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439279.1"
/db_xref="GeneID:16608355"
/translation="MCVTEVPEVFFQACGSLRNTVVTFDGAVEGLPLITDPVGVVGDI
IRIGELRADGRKQDAGLMRDAKSTMYISVLKARRRKKL"
gene 3059315..3060076
/locus_tag="SF2967"
/db_xref="GeneID:1026553"
CDS 3059315..3060076
/locus_tag="SF2967"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708741.2"
/db_xref="GeneID:1026553"
/translation="MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACA
RTALITDVGIALATELETAGQKWSLGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHN
TKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH
NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFT
AGVGISPFDVVHLDVAGLIGTDNTYGAVAQFQFTF"
misc_feature <3059330..3059827
/locus_tag="SF2967"
/note="F plasmid transfer operon, TraF, protein; Region:
TraF_2; cl16365"
/db_xref="CDD:472910"
gene 3060437..3064294
/gene="sigA"
/locus_tag="SF2968"
/db_xref="GeneID:1026065"
CDS 3060437..3064294
/gene="sigA"
/locus_tag="SF2968"
/codon_start=1
/transl_table=11
/product="serine protease"
/protein_id="NP_708742.1"
/db_xref="GeneID:1026065"
/translation="MNKIYSLKYSHITGGLVAVSELTRKVSVGTSRKKVILGIILSSI
YGSYGETAFAAMLDINNIWTRDYLDLAQNRGEFRPGATNVQLMMKDGKIFHFPELPVP
DFSAVSNKGATTSIGGAYSVTATHNGTQHHAITTQSWDQTAYKASNRVSSGDFSVHRL
NKFVVETTGVTESADFSLSPEDAMKRYGVNYNGKEQIIGFRAGAGTTSTILNGKQYLF
GQNYNPDLLSASLFNLDWKNKSYIYTNRTPFKNSPIFGDSGSGSYLYDKEQQKWVFHG
VTSTVGFISSTNIAWTNYSLFNNILVNNLKKNFTNTMQLDGKKQELSSIIKDKDLSVS
GGGVLTLKQDTDLGIGGLIFDKNQTYKVYGKDKSYKGAGIDIDNNTTVEWNVKGVAGD
NLHKIGSGTLDVKIAQGNNLKIGNGTVILSAEKAFNKIYMAGGKGTVKINAKDALSES
GNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGTTVTNSNVKQSTLSLTNTDAYMYHGN
VSGNISINHIINTTQQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKEGN
NNCPIPFLCQKDYSAAIKDQESTVNKRYNTEYKSNNQIASFSQPDWESRKFNFRKLNL
ENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRNITGEGFGFRQQLRSGDSA
GESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIINKGATVTAQGKMYVDKAIE
LAGTLTLTGTPTENNKYSPAIYMSDGYNMTEDGATLKAQNYAWVNGNIKSDKKASILF
GVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAASASMYNTLWRVNGQSALQS
LKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQSVNQSDKLIVKNQLTGS
NNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFSNISPVISTKEDQEH
TTWTLTGYKVAENTASSGAAKSYMSGNYKAFLTEVNNLNKRMGDLRDTNGEAGAWARI
MSGAGSASGGYSDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASSNAFSGKTKSV
GAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGAEAGYRYHV
TEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKSFSGKDW
KVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLRFGLE
FEKSAFGKYNVDNAINANFRYSF"
misc_feature 3060437..>3060544
/gene="sigA"
/locus_tag="SF2968"
/note="Extended Signal Peptide of Type V secretion system;
Region: ESPR; pfam13018"
/db_xref="CDD:463773"
misc_feature 3060635..3062374
/gene="sigA"
/locus_tag="SF2968"
/note="Immunoglobulin A1 protease; Region: Peptidase_S6;
pfam02395"
/db_xref="CDD:396804"
misc_feature 3062705..3063385
/gene="sigA"
/locus_tag="SF2968"
/note="Pertactin-like passenger domains (virulence
factors), C-terminal, subgroup 1, of autotransporter
proteins of the type V secretion system of Gram-negative
bacteria. This subgroup includes the passenger domains of
Neisseria and Haemophilus IgA1 proteases; Region:
PL1_Passenger_AT; cd01343"
/db_xref="CDD:238653"
misc_feature 3063047..3064291
/gene="sigA"
/locus_tag="SF2968"
/note="outer membrane autotransporter barrel domain;
Region: autotrans_barl; TIGR01414"
/db_xref="CDD:273608"
gene 3064341..3065082
/locus_tag="SF2969"
/pseudogene="unknown"
/db_xref="GeneID:1025230"
gene complement(3065325..3065672)
/locus_tag="SF2970"
/db_xref="GeneID:1026294"
CDS complement(3065325..3065672)
/locus_tag="SF2970"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708744.1"
/db_xref="GeneID:1026294"
/translation="MKTQSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENAL
RAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRV
SELLPWRIALPAE"
misc_feature complement(3065400..>3065660)
/locus_tag="SF2970"
/note="IS66 family transposase; Region: transpos_IS66;
NF033517"
/db_xref="CDD:468053"
gene 3065798..3066304
/locus_tag="SF2971"
/db_xref="GeneID:1026282"
CDS 3065798..3066304
/locus_tag="SF2971"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708745.1"
/db_xref="GeneID:1026282"
/translation="MVARGFTGSETIVRDAVAKWRKGWNPPVTTAVRLPSVSRVSRWL
MPWRITRDEENYASRFISLMCEKEPELKIAQQLALEFYRILKTQNKSQLSSWFTRVHE
SGSAEFRRVAAGMEADAAAICEAISSRWSNGVVEGHVNRLKKMLKRQMYGRAGFELLR
QRVMSPLA"
misc_feature <3065918..3066289
/locus_tag="SF2971"
/note="Transposase [Mobilome: prophages, transposons];
Region: COG3464"
/db_xref="CDD:442687"
gene 3066391..3067305
/locus_tag="SF2972"
/db_xref="GeneID:1026256"
CDS 3066391..3067305
/locus_tag="SF2972"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708746.1"
/db_xref="GeneID:1026256"
/translation="MELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVP
VQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQA
DAYGGYRALYESGRITEAACMAHARRKIHDVHARVPTDITTEALQRIGELYTIEAEVR
GCSAEQRLAARKARAAPLMQSLYDRIQQQMKTLSRHSDTAKAFAYLLKQWKALNVYCS
NGWVEIDNNIAENALRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLNDVDPESYL
RHVLGVIADWPVNRVSELLPWRIALPAE"
misc_feature <3066394..3067230
/locus_tag="SF2972"
/note="IS66 family transposase; Region: transpos_IS66;
NF033517"
/db_xref="CDD:468053"
gene complement(3067737..3071855)
/gene="pic"
/locus_tag="SF2973"
/db_xref="GeneID:1026598"
CDS complement(3067737..3071855)
/gene="pic"
/locus_tag="SF2973"
/codon_start=1
/transl_table=11
/product="serine protease"
/protein_id="NP_708747.3"
/db_xref="GeneID:1026598"
/translation="MNKVYSLKYCPVTGGLIAVSELARRVIKKTCRRLTHILLAGIPA
ICLCYSQISQAGIVRSDIAYQIYRDFAENKGLFVPGANDIPVYDKDGKLVGRLGKAPM
ADFSSVSSNGVATLVSPQYIVSVKHNGGYRSVSFGNGKNTYSLVDRNNHPSIDFHAPR
LNKLVTEVIPSAVTSEGTKANAYKYTERYTAFYRVGSGTQYTKDKDGNLVKVAGGYAF
KTGGTTGVPLISDATIVSNPGQTYNPVNGPLPDYGAPGDSGSPLFAYDKQQKKWVIVA
VLRAYAGINGATNWWNVIPTDYLNQVMQDDFDAPVDFVSGLGPLNWTYDKTSGTGTLS
QGSKNWTMHGQKDNDLNAGKNLVFSGQNGAIILKDSVTQGAGYLEFKDSYTVSAESGK
TWTGAGIITDKGTNVTWKVNGVAGDNLHKLGEGTLTINGTGVNPGGLKTGDGIVVLNQ
QADTAGNIQAFSSVNLASGRPTVVLGDARQVNPDNISWGYRGGKLDLNGNAVTFTRLQ
AADYGAVITNNAQQKSQLLLDLKAQDTNVSEPTIGNISPFGGTGTPGNLYSMILNSQT
RFYILKSASYGNTLWGNSLNDPAQWEFVGMNKNKAVQTVKDRILAGRAKQPVIFHGQL
TGNMDVAIPQVPGGRKVIFDGSVNLPEGTLSQDSGTLIFQGHPVIHASISGSAPVSLN
QKDWENRQFTMKTLSLKDADFHLSRNASLNSDIKSDNSHITLGSDRAFVDKNDGTGNY
VIPEEGTSVPDTVNDRSQYEGNITLNHNSALDIGSRFTGGIDAYDSAVSITSPDVLLT
APGAFAGSSLTVHDGGHLTALNGLFSDGHIQAGKNGKITLSGTPVKDTANQYAPAVYL
TDGYDLTGDNAALEITRGAHASGDIHASAASTVTIGSDTPAELASAETAASAFAGSLL
EGYNAAFNGAITGGRADVSMHNALWTLGGDSAIHSLTVRNSRISSEGDRTFRTLTVNK
LDATGSDFVLRTDLKNADKINVTEKATGSDNSLNVSFMNNPAQGQALNIPLVTAPAGT
SAEMFKAGTRVTGFSRVTPTLHVDTSGGNTKWILDGFKAEADKAAAAKADSFMNAGYK
NFMTEVNNLNKRMGDLRDTNGDAGAWARIMSGAGSADGGYSDNYTHVQVGFDKKHELD
GVDLFTGVTMTYTDSSADSHAFSGKTKSVGGGLYASALFESGAYIDLIGKYIHHDNDY
TGNFASLGTKHYNTHSWYAGAETGYRYHLTEDTFIEPQAELVYGAVSGKTFRWKDGDM
DLSMKNRDFSPLVGRTGVELGKTFSGKDWSVTARAGTSWQFDLLNNGETVLRDASGEK
RIKGEKDSRMLFNVGMNAQIKDNMRFGLEFEKSAFGKYNVDNAVNANFRYMF"
misc_feature complement(<3071757..3071855)
/gene="pic"
/locus_tag="SF2973"
/note="Extended Signal Peptide of Type V secretion system;
Region: ESPR; pfam13018"
/db_xref="CDD:463773"
misc_feature complement(3069534..3071690)
/gene="pic"
/locus_tag="SF2973"
/note="Immunoglobulin A1 protease; Region: Peptidase_S6;
pfam02395"
/db_xref="CDD:396804"
misc_feature complement(3068655..3069383)
/gene="pic"
/locus_tag="SF2973"
/note="Pertactin-like passenger domains (virulence
factors), C-terminal, subgroup 1, of autotransporter
proteins of the type V secretion system of Gram-negative
bacteria. This subgroup includes the passenger domains of
Neisseria and Haemophilus IgA1 proteases; Region:
PL1_Passenger_AT; cd01343"
/db_xref="CDD:238653"
misc_feature complement(3067740..3068966)
/gene="pic"
/locus_tag="SF2973"
/note="outer membrane autotransporter barrel domain;
Region: autotrans_barl; TIGR01414"
/db_xref="CDD:273608"
mobile_element complement(3071978..3072492)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(3072020..3072466)
/locus_tag="SF2974"
/pseudogene="unknown"
/db_xref="GeneID:1026594"
gene complement(3072583..3074091)
/locus_tag="SF2976"
/db_xref="GeneID:1026107"
CDS complement(3072583..3074091)
/locus_tag="SF2976"
/note="Code: L; COG: COG3344"
/codon_start=1
/transl_table=11
/product="reverse transcriptase-like protein"
/protein_id="NP_708749.1"
/db_xref="GeneID:1026107"
/translation="MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAH
TPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALR
DRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEG
DLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVI
SPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCR
YADDFVLIVKGTKAQAEAIREECRGVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIR
KRSRYGEMRVVSTIPQEKARNFAASLTALLSGNYSESKVDMAEQLNRKLKGWAMFYQF
VDFKAKVFSYIDRVVFWKLAHWLARKYRTGIASLMRWWCKSPKPGQSKTWVLFGKTNH
GKLSGEILYRLVGQGKKLFRWRLPEGNPYLRTETRNTYTSRFTEVAMAFASI"
misc_feature complement(3072835..3074004)
/locus_tag="SF2976"
/note="group II intron reverse transcriptase/maturase;
Region: group_II_RT_mat; TIGR04416"
/db_xref="CDD:275209"
misc_feature complement(order(3073105..3073110,3073252..3073257,
3073261..3073263,3073447..3073452,3073594..3073611))
/locus_tag="SF2976"
/note="putative active site [active]"
/db_xref="CDD:238828"
misc_feature complement(order(3073255..3073257,3073450..3073452,
3073594..3073611))
/locus_tag="SF2976"
/note="putative NTP binding site [chemical binding]; other
site"
/db_xref="CDD:238828"
misc_feature complement(3073447..3073449)
/locus_tag="SF2976"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:238828"
gene 3074520..3074771
/locus_tag="SF2977"
/db_xref="GeneID:1026021"
CDS 3074520..3074771
/locus_tag="SF2977"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708751.1"
/db_xref="GeneID:1026021"
/translation="MFFSLSVLNLEDHLGLVISPQSPLSAGYITLRACRRSLPLRFST
VTPGGIVGFLIVSYRFNIPDRLAVHLSIHARPELRAHRK"
mobile_element complement(3074763..3075553)
/note="partial"
/mobile_element_type="insertion sequence:IS629"
gene complement(3075173..3075499)
/locus_tag="SF2979"
/db_xref="GeneID:1026036"
CDS complement(3075173..3075499)
/locus_tag="SF2979"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS629 protein"
/protein_id="NP_708753.1"
/db_xref="GeneID:1026036"
/translation="MTKNTRFSPEVRQRAVRMVLESQSEYDSQWATICSIAPKIGCTP
ETLRVWVRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEF
DRLWKK"
misc_feature complement(3075209..3075496)
/locus_tag="SF2979"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene complement(3075782..3076207)
/locus_tag="SF2980"
/db_xref="GeneID:1026544"
CDS complement(3075782..3076207)
/locus_tag="SF2980"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708754.1"
/db_xref="GeneID:1026544"
/translation="MNGIKTGLGITPGEHIISADSALSRNIRQCFCLSCHGRLILQTD
AQGAWFEHDLHALSEQQKADCVVLNPEKSHPYIEDMAMFLSPLPVVLEWHCVMCEQFF
HGKKFCEACGTGIYCRAVCTKSVYSYQPDLFEDCGGAST"
misc_feature complement(3075848..3076165)
/locus_tag="SF2980"
/note="Probable zinc-ribbon; Region: zinc_ribbon_11;
pfam11682"
/db_xref="CDD:288524"
gene complement(3076204..3076587)
/locus_tag="SF2981"
/db_xref="GeneID:1026599"
CDS complement(3076204..3076587)
/locus_tag="SF2981"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708755.1"
/db_xref="GeneID:1026599"
/translation="MYAKSFLALDGNGRLTGARTAQTAPYDSYTCHLCGSALRYHPQY
DTERPWFEHADEGLTEHGHECPYVRPERREIRLIKRLQQFVPDTLPVVRKASWHCRQC
HHDYYGEQYCTHCQTGRFSEEGGAE"
misc_feature complement(3076225..3076578)
/locus_tag="SF2981"
/note="Probable zinc-ribbon; Region: zinc_ribbon_11;
pfam11682"
/db_xref="CDD:288524"
gene complement(3076960..3077559)
/locus_tag="SF2982"
/db_xref="GeneID:1026568"
CDS complement(3076960..3077559)
/locus_tag="SF2982"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708756.1"
/db_xref="GeneID:1026568"
/translation="MQTYNTNPAYEMAPQLLEHFNQHLDSLFGVYSKLLPFRMDFAYR
KNTLSYRCACRYAMCAEMLQLINEVGEKLVGYAWVMEYTERKGLHIHFVGYLNGQSHR
SSYLVSRLMGDIWRRVTEGNGYYHWCRFNKNYPVNINHVIHYSDHKAVNDLRYAISYL
AKREQKECGIILKCSGLPEKSNRGRPRLDSPLPGICALV"
misc_feature complement(3077062..>3077355)
/locus_tag="SF2982"
/note="Inovirus Gp2; Region: Inovirus_Gp2; pfam11726"
/db_xref="CDD:432027"
mobile_element complement(3077704..3079032)
/mobile_element_type="insertion sequence:iso-IS10R"
gene complement(3077717..3078925)
/locus_tag="SF2983"
/db_xref="GeneID:1026549"
CDS complement(3077717..3078925)
/locus_tag="SF2983"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_708757.1"
/db_xref="GeneID:1026549"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature complement(3077756..3078811)
/locus_tag="SF2983"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
mobile_element 3079523..3080854
/mobile_element_type="insertion sequence:IS2"
gene 3079569..3079979
/locus_tag="SF2984"
/db_xref="GeneID:1026607"
CDS 3079569..3079979
/locus_tag="SF2984"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_708758.3"
/db_xref="GeneID:1026607"
/translation="MIVLILVFRLVIGVQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 3079614..3079976
/locus_tag="SF2984"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 3080055..3080843
/locus_tag="SF2985"
/db_xref="GeneID:1026829"
CDS 3080055..3080843
/locus_tag="SF2985"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion element IS2 transposase InsD"
/protein_id="NP_708759.1"
/db_xref="GeneID:1026829"
/translation="MAPRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDG
MPAINAKRVYRLMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNG
ERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDN
GSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAA
KNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI"
misc_feature 3080055..3080840
/locus_tag="SF2985"
/note="insertion element IS2 transposase InsD;
Provisional; Region: PRK14702"
/db_xref="CDD:237792"
gene 3081530..3082321
/locus_tag="SF2986"
/db_xref="GeneID:1026264"
CDS 3081530..3082321
/locus_tag="SF2986"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708760.1"
/db_xref="GeneID:1026264"
/translation="MTTRITFSMTSDETLRIVDEYCHTHKLSRSKVINALLSATAPVL
NDINCYYQLAGELQSRLLNGVYQRDLPRKRNVVSAEKYCLEIWENKLFTRRILEFDSS
NGVLYALKHKRHYRRDKMIGRVESRCIKDICEYQMQLSGEKTKYACFIYIERTIYNHD
NPSDKIPVKAAVGNAVILLAKDVIYNEYFFDLRQSFFVSVTDLMVSGAKGIPETQTYP
DVYCWIPLFSINSGVLITPVYKIDPLKPVTVKKPDKITVVCNYRE"
gene 3082707..3082913
/locus_tag="SF2987"
/db_xref="GeneID:1026498"
CDS 3082707..3082913
/locus_tag="SF2987"
/note="Code: K; COG: COG3311"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708761.1"
/db_xref="GeneID:1026498"
/translation="MNTPVSLMDDQMVDMSFITQLTGLTDKWFYKLIKHGAFPPPIKL
GRSSRWLKSEVEAWLQARIAQSRP"
misc_feature 3082722..3082907
/locus_tag="SF2987"
/note="DNA-binding transcriptional regulator AlpA
[Transcription, Mobilome: prophages, transposons]; Region:
AlpA; COG3311"
/db_xref="CDD:442540"
gene 3082999..3083571
/locus_tag="SF2988"
/db_xref="GeneID:1026518"
CDS 3082999..3083571
/locus_tag="SF2988"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708762.1"
/db_xref="GeneID:1026518"
/translation="MQQLENRCDLLLIQHQKWMTSVTRLIVAHGMGSPHLHGYHRLTL
AHFFLPEKGSVISVAPQGLYQVVNPGTPPFIPAIQEGLMTSIQTHEIMLLTHFNLGGV
LLSELHRLGENRLANRLNSLLRRFDDRDLYHTLIWLCWYDLMCAHSMQPWTEELKHKS
HAELENWAVARKREKRELELMIDEYLLYAC"
gene 3085140..3086159
/locus_tag="SF2989"
/db_xref="GeneID:1024416"
CDS 3085140..3086159
/locus_tag="SF2989"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708763.1"
/db_xref="GeneID:1024416"
/translation="MNNEQMLIKCRDPRKCRFYAEYLNHKYPNEFPHFAPDNPQNCIR
NVNLFLKEKYCNVSPPPFGTFGTTEEEALNNEINELEIIAGQAILPEESFLWLKTDEL
ATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP
SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMC
QWFWTRLKQKQDEKHPVHNPVTRWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRI
NHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRTGEFFEMLITEKYLE
HKRRK"
gene 3086269..3087141
/gene="sap"
/locus_tag="SF2990"
/db_xref="GeneID:1026540"
CDS 3086269..3087141
/gene="sap"
/locus_tag="SF2990"
/note="Code: R; COG: COG3596"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708764.1"
/db_xref="GeneID:1026540"
/translation="MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGK
SGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLSGHGHSMVITDLPEVGESRDRDA
EYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPC
HEWDMAGIQPSPAQEQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALP
DHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDT
VVSVARAVWNWIFF"
misc_feature 3086269..3087111
/gene="sap"
/locus_tag="SF2990"
/note="Predicted GTPase [General function prediction
only]; Region: YeeP; COG3596"
/db_xref="CDD:442815"
gene 3087469..3090597
/locus_tag="SF2991"
/db_xref="GeneID:1026602"
CDS 3087469..3090597
/locus_tag="SF2991"
/codon_start=1
/transl_table=11
/product="outer membrane fluffing protein"
/protein_id="NP_708765.1"
/db_xref="GeneID:1026602"
/translation="MLMKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGVAVALSL
AAVTSLPVLAADIVVHPGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTG
GQWIKAGGTGRNTTVTANGRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQW
VHGGGKAAGTIINQDGYQTIKHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTT
INKNGRQVIWSSGMARDTLIYAGGDQTVHGEAHNTRLEGGNQYVHNGGTATETLINRD
GWQVIKEGGTAAHTTINQKGKLQVNAGGKASDVTQNTGGALVTSTAATVTGTNRLGAF
SVVEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLA
DSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGT
LAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGALTGNGSVEKSGSGTLTVSNT
TLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATW
NIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQ
NNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQVVEAINGATTEEGAFIQGN
KLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGV
SGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAG
VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKA
SSDNNDFRVRGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNASYVKFG
HGSAQHVRAGFRLGSHHDMNFGKGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSS
RGDMSMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGVQASYAHSINGSSAE
GYNSQATLNVTF"
misc_feature 3087475..3090594
/locus_tag="SF2991"
/note="Ag43/Cah family autotransporter adhesin; Region:
auto_Ag43; NF033177"
/db_xref="CDD:467980"
misc_feature 3089026..3089598
/locus_tag="SF2991"
/note="Pertactin-like passenger domains (virulence
factors), C-terminal, subgroup 2, of autotransporter
proteins of the type V secretion system of Gram-negative
bacteria. This subgroup includes the passenger domains of
the nonprotease autotransporters, Ag43; Region:
PL2_Passenger_AT; cd01344"
/db_xref="CDD:238654"
gene 3090718..3093234
/locus_tag="SF2992"
/db_xref="GeneID:1026597"
CDS 3090718..3093234
/locus_tag="SF2992"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708766.2"
/db_xref="GeneID:1026597"
/translation="MLQIVGALILLIAGFAILRLLFRALTSTASALAGFILLCLFGPA
LLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTT
ALAAGLLALPVQIRTIQQNGLTPEDISKEINGYYCCFYTAFFLMACSAYAPLIALQFD
ISPSLMWWGGLLYWLAALVTLLWAASQIQALKRLTSAISQTLEEQPVLNSKSWLSSLQ
NDYSLPETLTERIWLTLISQRISRGELREFELADGNWLLNNAWYERNMAGFNEQLKEN
LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICA
SCGLTEVHHAPENHKPAPEWYCSSLCHETETLCQDIYERSYTGFISDATANGLILMKL
PETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEI
QTKYCSTAARSVGAAFDGQNGQYRYMGNHGPMQLEVPRDQYAGAVETMKNKIREGKVP
GVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFALTAS
VFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLTVVQGMLKHIDFSTASPT
VRQALQKGTGAGNISALNKVMKGTLVTSLALVAVTTSPDMIKMLRGRISGAQFIRNLA
VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEED
RVKILAMIQEQVTWLAGSFLLTGHEIENLNANLARVIDQNALEIIFAAGIQQRAATNM
LIKPLVVSIIRQRPVMEYDASHLGKMVNRLEEAFPPELPA"
gene 3093310..3093765
/locus_tag="SF2993"
/db_xref="GeneID:1026551"
CDS 3093310..3093765
/locus_tag="SF2993"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708767.1"
/db_xref="GeneID:1026551"
/translation="MIHLFKTCMITAFILGLTWSAPLRAQDQRYISIRNTDTIWLPGN
ICAYQFRLDNGGNGEGFGPLTITLQLKDKYGQTLVTRKMETEAFGDSNATRTTDAFLE
TECVENVATTEIIKATEESNGHRVSLPLSVFDPQDYHPLLITVSGKNVN"
misc_feature 3093400..3093717
/locus_tag="SF2993"
/note="interleukin receptor mimic protein A; Region: IrmA;
pfam18673"
/db_xref="CDD:436657"
gene complement(3093884..3094072)
/locus_tag="SF2993a"
/db_xref="GeneID:16608356"
CDS complement(3093884..3094072)
/locus_tag="SF2993a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439280.1"
/db_xref="GeneID:16608356"
/translation="MSEKPSTGEPRIKLFSGISFRVPAASASLTFRVADNPTEMHSRV
ILDKHIAVSGYDSNRLPV"
gene 3094176..3094994
/locus_tag="SF2994"
/db_xref="GeneID:1026630"
CDS 3094176..3094994
/locus_tag="SF2994"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708768.1"
/db_xref="GeneID:1026630"
/translation="MQLVSRFGYANQIRRDRPLTHEELMHHVPGIFGEEKHTSRSQNY
TYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIIL
LNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWS
TYQTIQENMLKGGISGRSAKGKRIHTRAIHNIDTDIKLNRALWVMAETLLESLR"
misc_feature 3094281..3094958
/locus_tag="SF2994"
/note="Domain of unknown function (DUF932); Region:
DUF932; pfam06067"
/db_xref="CDD:461817"
gene 3095336..3095809
/locus_tag="SF2995"
/db_xref="GeneID:1026555"
CDS 3095336..3095809
/locus_tag="SF2995"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708769.2"
/db_xref="GeneID:1026555"
/translation="MKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIP
QWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGN
RAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID"
misc_feature 3095519..3095806
/locus_tag="SF2995"
/note="Antirestriction protein; Region: Antirestrict;
pfam03230"
/db_xref="CDD:427206"
gene 3095810..3096301
/gene="yeeS"
/locus_tag="SF2996"
/db_xref="GeneID:1026615"
CDS 3095810..3096301
/gene="yeeS"
/locus_tag="SF2996"
/note="Code: L; COG: COG2003"
/codon_start=1
/transl_table=11
/product="RADC family DNA repair protein"
/protein_id="NP_708770.1"
/db_xref="GeneID:1026615"
/translation="MVAGTMQQLSFLPGEMTTRERSLILRALKTLDRHLHEPGVAFTS
THAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALY
HNAAAVVLAHNHPSGEVPPSKADRLITERLVQALALVDIRVPDHLIVGGSQVFSFAEH
GLL"
misc_feature <3095906..3096298
/gene="yeeS"
/locus_tag="SF2996"
/note="DNA repair protein RadC; Region: PRK00024"
/db_xref="CDD:178801"
gene 3096388..3096609
/gene="yeeT"
/locus_tag="SF2997"
/db_xref="GeneID:1026552"
CDS 3096388..3096609
/gene="yeeT"
/locus_tag="SF2997"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708771.1"
/db_xref="GeneID:1026552"
/translation="MKIITRGEAMRIHRQHPASRLFPFCTGKYRWHGSTDTYTGREVQ
DIPGVLAVFAERRKDSFGPYVRLMSVTLN"
misc_feature 3096388..3096582
/gene="yeeT"
/locus_tag="SF2997"
/note="Protein of unknown function (DUF987); Region:
DUF987; pfam06174"
/db_xref="CDD:368775"
gene 3096689..3097066
/gene="yeeU"
/locus_tag="SF2998"
/db_xref="GeneID:1026538"
CDS 3096689..3097066
/gene="yeeU"
/locus_tag="SF2998"
/codon_start=1
/transl_table=11
/product="structural protein"
/protein_id="NP_708772.1"
/db_xref="GeneID:1026538"
/translation="MSDTLPGTTPPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYL
ADRAGIRGRFSDVDAYHLDQAFPLLMKQLELMLTGGELNPRHQHTVTLYAKGLTCEAD
TLGSCGYVYLAVYPTPAAPATTV"
misc_feature 3096740..3097042
/gene="yeeU"
/locus_tag="SF2998"
/note="type IV, cytoskeleton bundling-enhancing factor A;
Region: CbeA_antitoxin; pfam06154"
/db_xref="CDD:399275"
gene 3097113..3097490
/gene="yeeV"
/locus_tag="SF2999"
/db_xref="GeneID:1026503"
CDS 3097113..3097490
/gene="yeeV"
/locus_tag="SF2999"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708773.1"
/db_xref="GeneID:1026503"
/translation="MNTLPDTHVREASGCPSPITIWQTLLTRLLDQHYGLTLNDTPFA
DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSAGAPSQLINSIDILRARRATG
LMTRDNYRTVNNITRGKHPEAKQ"
misc_feature 3097113..3097436
/gene="yeeV"
/locus_tag="SF2999"
/note="CbtA_toxin of type IV toxin-antitoxin system;
Region: CbtA_toxin; pfam06755"
/db_xref="CDD:369065"
gene 3097487..3097975
/gene="yeeW"
/locus_tag="SF3000"
/db_xref="GeneID:1026500"
CDS 3097487..3097975
/gene="yeeW"
/locus_tag="SF3000"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708774.1"
/db_xref="GeneID:1026500"
/translation="MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYS
LRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDNAWLYSLSHQTNDDGETEWIHFT
GSGYLLRTDAWSYPVLRLKRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGFPTF
DW"
misc_feature 3097490..3097972
/gene="yeeW"
/locus_tag="SF3000"
/note="Family of unknown function (DUF5983); Region:
DUF5983; pfam19419"
/db_xref="CDD:437251"
gene 3097995..3098192
/locus_tag="SF3001"
/db_xref="GeneID:1026360"
CDS 3097995..3098192
/locus_tag="SF3001"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708775.1"
/db_xref="GeneID:1026360"
/translation="MKLLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPC
IEQAREDIRTLRQLQFLQQNR"
gene 3098277..3099119
/locus_tag="SF3002"
/db_xref="GeneID:1026405"
CDS 3098277..3099119
/locus_tag="SF3002"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708776.1"
/db_xref="GeneID:1026405"
/translation="MSEITASRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQ
LAEVSAMTESIRGKTALDWAMKQDFRCGCWLMEKPETAMKAITRNLDRELWRDLMQRS
GMLSLMDAQTRDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFKGLS
WDYKTNSPCKFGSKIIVNNLVRWDRWGFHLITGQQTDRLVDLERMLHLFSGKPIPDNR
ENITIRLDGHIQSVQGKERYEDEMFIIKYFKKGSAHITFKRLELIDRINDIIARYFPS
VLSA"
misc_feature 3098541..3099098
/locus_tag="SF3002"
/note="Domain of unknown function (DUF4942); Region:
DUF4942; pfam13708"
/db_xref="CDD:433419"
mobile_element 3099615..3100943
/mobile_element_type="insertion sequence:iso-IS10R"
gene 3099722..3100930
/locus_tag="SF3003"
/db_xref="GeneID:1026833"
CDS 3099722..3100930
/locus_tag="SF3003"
/codon_start=1
/transl_table=11
/product="insertion element iso-IS10R transposase"
/protein_id="NP_708777.1"
/db_xref="GeneID:1026833"
/translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTEL
GRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIR
EQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLAALASILPSNTTPLIVS
DAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKR
LTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIR
TPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWL
AGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNL
FTHGYVLGKL"
misc_feature 3099836..3100891
/locus_tag="SF3003"
/note="IS4 family transposase; Region: transpos_IS4_2;
NF033591"
/db_xref="CDD:468100"
gene 3101189..3101479
/locus_tag="SF3004"
/db_xref="GeneID:1026592"
CDS 3101189..3101479
/locus_tag="SF3004"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708778.1"
/db_xref="GeneID:1026592"
/translation="MDATGNTTVTCLSHKMKYKEVACGKQRMHWLALQFVDENNNPVS
GLNVQLEYHPRAMAAELALWARGRHTQFDPTPPPPPVGVTDSQGLVRFDDLY"
mobile_element 3101817..3103074
/mobile_element_type="insertion sequence:IS3"
gene 3101873..3102181
/locus_tag="SF3005"
/db_xref="GeneID:1026617"
CDS 3101873..3102181
/locus_tag="SF3005"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3 transposase InsE"
/protein_id="NP_708779.1"
/db_xref="GeneID:1026617"
/translation="MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSL
YESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK
"
misc_feature 3101906..3102163
/locus_tag="SF3005"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 3102178..3103044
/locus_tag="SF3006"
/db_xref="GeneID:1026623"
CDS 3102178..3103044
/locus_tag="SF3006"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence IS3A transposase InsF"
/protein_id="NP_708780.1"
/db_xref="GeneID:1026623"
/translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ
FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF
SPVSYRAHGLPVSENLLEQDFYASGPNQKWPGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLPCDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM
SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG
LSPEQFENQNLA"
misc_feature <3102178..3103026
/locus_tag="SF3006"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene complement(3103148..3103615)
/locus_tag="SF3007"
/db_xref="GeneID:1026608"
CDS complement(3103148..3103615)
/locus_tag="SF3007"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708781.1"
/db_xref="GeneID:1026608"
/translation="MYGTWSLSMAAIWLLRVDLLFVALFLIFISWGDILLRIISHRYL
LVLTVLIFLALILQHQKPNLVAAGSVLLVGFFLFSAGIIGGGDVKLLTVLSLAIDEHE
LANFLVAMTFCGALVVLAGLLFFRKSIRENGVPYAVPISLAFLLTYPVFPLFC"
misc_feature complement(3103154..3103561)
/locus_tag="SF3007"
/note="Flp pilus assembly protein, peptidase CpaA
[Posttranslational modification, protein turnover,
chaperones, Signal transduction mechanisms]; Region: CpaA;
COG4960"
/db_xref="CDD:443986"
gene complement(3103681..3103920)
/locus_tag="SF3008"
/db_xref="GeneID:1025238"
CDS complement(3103681..3103920)
/locus_tag="SF3008"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708782.1"
/db_xref="GeneID:1025238"
/translation="MNTFITKYYGKTKQCFARFAKDERGVTAIEYALIGVAMATLLAF
IFGDQNSGFLGAIKDAFDAIAAAIQQVTISGTSNP"
misc_feature complement(3103750..3103884)
/locus_tag="SF3008"
/note="Flp pilus assembly protein, pilin Flp
[Intracellular trafficking, secretion, and vesicular
transport, Extracellular structures]; Region: Flp;
COG3847"
/db_xref="CDD:443057"
gene complement(3104055..3104660)
/locus_tag="SF3009"
/db_xref="GeneID:1026616"
CDS complement(3104055..3104660)
/locus_tag="SF3009"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708783.1"
/db_xref="GeneID:1026616"
/translation="MSDDRFYFSLGQGVKFYPASRRITTSTGNVINLSENGYRFLLLL
LQGESDKQHIINEVWREQKGSVSDSSYYGQIYMLRKALDVAGLSSSLIKTIPRKGVRY
LGKVEKHVCENERDSDEDSSSYTNDSEAREVNTDANIPENDNSQEFSTEELLPIKHTD
KNIEWYRTKQWSVFISVLTVLAVCWLTTLVFLVLLFLNQDK"
misc_feature complement(3104340..3104624)
/locus_tag="SF3009"
/note="DNA-binding winged helix-turn-helix (wHTH) domain
[Transcription]; Region: CadC1; COG3710"
/db_xref="CDD:442924"
mobile_element complement(3104760..3105528)
/mobile_element_type="insertion sequence:IS1"
gene complement(3105198..3105473)
/gene="insA"
/locus_tag="SF3011"
/db_xref="GeneID:1026619"
CDS complement(3105198..3105473)
/gene="insA"
/locus_tag="SF3011"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708785.1"
/db_xref="GeneID:1026619"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<3105201..3105452)
/gene="insA"
/locus_tag="SF3011"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
mobile_element complement(3105529..3106297)
/mobile_element_type="insertion sequence:IS1"
gene complement(3105967..3106242)
/gene="insA"
/locus_tag="SF3013"
/db_xref="GeneID:1026603"
CDS complement(3105967..3106242)
/gene="insA"
/locus_tag="SF3013"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708787.1"
/db_xref="GeneID:1026603"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<3105970..3106221)
/gene="insA"
/locus_tag="SF3013"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene complement(3107699..3109287)
/gene="yghK"
/locus_tag="SF3014"
/pseudogene="unknown"
/db_xref="GeneID:1026600"
gene complement(3109642..3111813)
/gene="glcB"
/locus_tag="SF3015"
/db_xref="GeneID:1026622"
CDS complement(3109642..3111813)
/gene="glcB"
/locus_tag="SF3015"
/note="Code: C; COG: COG2225"
/codon_start=1
/transl_table=11
/product="malate synthase G"
/protein_id="NP_708789.1"
/db_xref="GeneID:1026622"
/translation="MSQTITQGRLRIDANFKRFVDGEVLPGVELDAAAFWHNVDEIVH
DLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPERVTVET
TGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDP
QRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVG
YRGDAAAPTCILLKNNGLHIELQIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVA
AVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRQYTAADGSEISLHGRSL
LFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPK
MHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN
TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGM
WAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHHTNVQSVQANIAQTEFS
AEFEPLLDDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIH
NVALMEDRATLRISSQHIANWLRHGILTKEQVQASLENMAKVVDQQNAGDPAYRPMAG
NFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREKESH"
misc_feature complement(3109645..3111813)
/gene="glcB"
/locus_tag="SF3015"
/note="malate synthase G; Provisional; Region: PRK02999"
/db_xref="CDD:235097"
misc_feature complement(order(3109921..3109923,3110449..3110451,
3110455..3110457,3110533..3110535,3110800..3110802))
/gene="glcB"
/locus_tag="SF3015"
/note="active site"
/db_xref="CDD:238370"
gene complement(3111835..3112239)
/gene="glcG"
/locus_tag="SF3016"
/db_xref="GeneID:1026625"
CDS complement(3111835..3112239)
/gene="glcG"
/locus_tag="SF3016"
/note="Code: S; COG: COG3193"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708790.2"
/db_xref="GeneID:1026625"
/translation="MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLAL
SRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVV
VDGQIIGAVGVSGLTGAQDAQVAKVAAAVLAK"
misc_feature complement(3111838..3112239)
/gene="glcG"
/locus_tag="SF3016"
/note="hypothetical protein; Provisional; Region:
PRK09732"
/db_xref="CDD:170072"
gene complement(3112244..3113463)
/gene="glcF"
/locus_tag="SF3017"
/pseudo
/db_xref="GeneID:1026609"
misc_feature complement(3112244..3113463)
/gene="glcF"
/locus_tag="SF3017"
/note="Similar to Escherichia coli K12 glycolate oxidase
iron-sulfur subunit gi: 1789350 (762 aa). BLAST with
identity of 98% in 760 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(3113474..3114526)
/locus_tag="SF3017a"
/db_xref="GeneID:16608357"
CDS complement(3113474..3114526)
/locus_tag="SF3017a"
/codon_start=1
/transl_table=11
/product="glycolate oxidase FAD binding subunit"
/protein_id="YP_008439281.1"
/db_xref="GeneID:16608357"
/translation="MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQT
LDVRCHRGIVNYDPTELVITARAGTPLVAIEAALESAGQMLPCEPPHYGEEATWGGMV
ACGLAGPRRPWSGSVRDFVLGTRIITGTGKHLRFGGEVMKNVAGYDLSRLMAGSYGCL
GVLTEISMKVLPRPRASLSLRREISLQEAMSEIAEWQLQPLPISGLCYFDNALWIRLE
GGEGSVKAARELLGGEEVVGQFWQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQ
LIDWGGALRWLKSTADDNQIHRIARNAGGHATRFSAGDGGFAPLSAPLFRYHQQLKQQ
LDPCGVFNPGRMYAEL"
misc_feature complement(3113477..3114511)
/locus_tag="SF3017a"
/note="glycolate oxidase FAD binding subunit; Provisional;
Region: glcE; PRK11282"
/db_xref="CDD:236893"
gene complement(3114533..3116025)
/gene="glcD"
/locus_tag="SF3018"
/pseudo
/db_xref="GeneID:1026620"
misc_feature complement(3114533..3116025)
/gene="glcD"
/locus_tag="SF3018"
/note="Similar to Escherichia coli K12 glycolate oxidase
subunit D gi: 1789351 (500 aa). BLAST with identity of 98%
in 497 aa. This CDS contains an in-frame stop codon. The
sequence has been checked and is believed to be correct."
/pseudo
gene 3116276..3117046
/gene="glcC"
/locus_tag="SF3019"
/db_xref="GeneID:1026618"
CDS 3116276..3117046
/gene="glcC"
/locus_tag="SF3019"
/note="Code: K; COG: COG2186"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator GlcC"
/protein_id="NP_708791.2"
/db_xref="GeneID:1026618"
/translation="MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFS
SSALREGLTVLRGRGIIETAQGRDSHVARLNREQDTSPLIHLFSTQPRTLYDLLDVRA
LLEGESARLAATLGTQADFVVITRCYEKMLAASENHKEISLIEHAQLDHAFHLAICQA
SHNQVLVFTLQSLTDLMFNSVFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQ
RAARDHVRTVKKNLHDIELEGHHLIRSAVPLEMNKVGM"
misc_feature 3116276..3117025
/gene="glcC"
/locus_tag="SF3019"
/note="DNA-binding transcriptional regulator GlcC;
Provisional; Region: PRK09990"
/db_xref="CDD:182186"
gene complement(3117170..3118271)
/locus_tag="SF3020"
/pseudo
/db_xref="GeneID:1026611"
misc_feature complement(3117170..3118271)
/locus_tag="SF3020"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789354 (391 aa). BLAST with
identity of 99% in 367 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 3118715..3120403
/locus_tag="SF3021"
/db_xref="GeneID:1026649"
CDS 3118715..3120403
/locus_tag="SF3021"
/note="Code: IQ; COG: COG0318"
/codon_start=1
/transl_table=11
/product="acyl-CoA synthetase"
/protein_id="NP_708792.2"
/db_xref="GeneID:1026649"
/translation="MRYADFPTLVDALDYAALSRAGMNFYDRRCQLEDQLEYQTLKTR
AEAGAKRLLSLNLKKGERVALIAETSSGFVEAFFACQYAGLVAVPLAIPMGVGQRDSW
SAKLQGLLASCQPAAIITGDEWLPLVNAATHNNPELHVLSHAWFKALPEADVALQRPV
PNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPSDRCVSWQPFYHDMG
LVGFLLPPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNE
KDLAELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMPCYGLAENALAVSF
SDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIRNEAGMPV
AERVVGHICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYLLDGYLYVTGRIKDLI
IIRGRNIWPQDIEYIAEQEPEIHSGDAIAFVTAQEKIILQIQCRISDEERRGQLIHAL
AARIQSEFGVTAAIDLLPPHSIPRTSSGKPARAEAKKRYQKAYAASLNVQESLA"
misc_feature 3118715..3120400
/locus_tag="SF3021"
/note="fatty acyl-AMP ligase; Region: PRK09192"
/db_xref="CDD:236403"
gene 3120418..3121314
/locus_tag="SF3022"
/db_xref="GeneID:1026639"
CDS 3120418..3121314
/locus_tag="SF3022"
/note="Code: MG; COG: COG0702"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708793.1"
/db_xref="GeneID:1026639"
/translation="MTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGS
LEDTHSLSELVAGASVVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESGFCQRFLF
ISSLAARHPELSWYAKSKYVAEQRLAAMADEITLGVFRPTAVYGPGDKELKPLFDWML
RGLLPRLGAPDTQLSFLHVTDFAQAVGQWLSAETVQTQTYELCDGVAGGYDWQRVRQL
AAKARCGSVRMVDIPLPVLTGLADISTALSRLAGKEPMLTRSKIRELTHADWSASNNR
ISEDINWFPGISLEHALRNGLF"
misc_feature 3120421..3121299
/locus_tag="SF3022"
/note="Nucleoside-diphosphate-sugar epimerase [Cell
wall/membrane/envelope biogenesis]; Region: WcaG; COG0451"
/db_xref="CDD:440220"
gene 3121347..3121595
/locus_tag="SF3023"
/db_xref="GeneID:1026612"
CDS 3121347..3121595
/locus_tag="SF3023"
/note="Code: IQ; COG: COG0236"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708794.1"
/db_xref="GeneID:1026612"
/translation="MVNREIVMDYILSCLQDLVENGVEIKPDSDLVNDLGLESIKVMD
LLMMLEDRFDISIPINILLDVKTPAQLMETLLPWLENK"
misc_feature 3121353..3121571
/locus_tag="SF3023"
/note="Acyl carrier protein [Lipid transport and
metabolism]; Region: AcpP; COG0236"
/db_xref="CDD:440006"
gene 3121595..3122766
/locus_tag="SF3025"
/pseudogene="unknown"
/db_xref="GeneID:1026614"
gene 3121595..3121945
/locus_tag="SF3024"
/db_xref="GeneID:1026605"
CDS 3121595..3121945
/locus_tag="SF3024"
/codon_start=1
/transl_table=11
/product="class II aminotransferase"
/protein_id="NP_708795.1"
/db_xref="GeneID:1026605"
/translation="MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKK
VILAGTNNYLGLTFNHDAISEGQAALAAQGTGTTGSRMANGSYAPHLALEKEIAEFFN
RPTAIVFQPVIPLI"
misc_feature 3121613..>3121924
/locus_tag="SF3024"
/note="7-keto-8-aminopelargonate synthetase or related
enzyme [Coenzyme transport and metabolism]; Region: BioF;
COG0156"
/db_xref="CDD:439926"
gene complement(3122802..3123881)
/locus_tag="SF3026"
/db_xref="GeneID:1026610"
CDS complement(3122802..3123881)
/locus_tag="SF3026"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708797.1"
/db_xref="GeneID:1026610"
/translation="MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDGVSPGGY
RWTQAVLVVLMTLPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV
ALVAGILWTVSLGAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVT
VKSLNEQGQPVGVEIFHYRDDLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETL
ETLDNLAWQSAFTSMNLEELSMPGNTFSVRQLNHYIHYLQETGQPSSEYHLALWEKLG
QPILTLAMILLAVPFTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAP
VTALGLPVAFVLVALSLVYWYDRQH"
misc_feature complement(3122820..3123794)
/locus_tag="SF3026"
/note="LPS export ABC transporter permease LptG; Region:
LptG_lptG; TIGR04408"
/db_xref="CDD:275201"
gene complement(3123878..3124948)
/locus_tag="SF3027"
/db_xref="GeneID:1026593"
CDS complement(3123878..3124948)
/locus_tag="SF3027"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708798.1"
/db_xref="GeneID:1026593"
/translation="MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTL
ALDVVLDIVFYKVLIALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKA
VLYLAIPLSIFVTLLSMYGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMIL
SQTVDQDNNRLTDALIYTSTANRTRIFRAGSVDVVDPSPEKPTVMLHNGTAYLLDHQG
RDDNEQIYRNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLTALL
MALLAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPG
LMLMGLLILVARDFSLLQKFSR"
misc_feature complement(3123950..3124939)
/locus_tag="SF3027"
/note="LPS export ABC transporter permease LptF; Region:
LptF_YjgP; TIGR04407"
/db_xref="CDD:275200"
gene complement(3124979..3125539)
/locus_tag="SF3028"
/db_xref="GeneID:1026604"
CDS complement(3124979..3125539)
/locus_tag="SF3028"
/note="Code: R; COG: COG3054"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708799.2"
/db_xref="GeneID:1026604"
/translation="MSSRLIIALIIMLLAPGVQAHNFVTGKTVTPVYIQEGGELLLNS
DDEIHYQKWNSTQLAGKVRIIQYIAGRKSAKKKNSLLIKAVEAANFPQDRFQPTTIVN
TDDAIFGTGYFVVGKIEKNKRRYPWAQFVIDGNGQGRVAWRLPEQSSTILVLNKAGQI
QWAKDGSLTPEEVDHVIALAQKLINE"
misc_feature complement(3124982..3125488)
/locus_tag="SF3028"
/note="Predicted transcriptional regulator YtfJ [General
function prediction only]; Region: YtfJ; COG3054"
/db_xref="CDD:442288"
gene complement(3125551..3126375)
/locus_tag="SF3029"
/db_xref="GeneID:1026641"
CDS complement(3125551..3126375)
/locus_tag="SF3029"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708800.1"
/db_xref="GeneID:1026641"
/translation="MMRKYFPLEASERLFVAIEEDDVVDAQVSLPPTIALSCTTEIIH
DNYALCLQFWLNGVDRQELLRLVRKQAKGDELTADERKQFKYMRARYKHLRFAQRLYL
KKHQAGFLFGKTTVFLGRFQDGFRNGKKNIVSYYGNLLRIYLSSPVWSLVNYSLRHSQ
LESVSSFIAYRQKQMHTLKEIIAKPRLTGREFHDVRKIISQQVSYYDTLRSLDPENKE
ALQISRFLAAINGLMGDKHDDMVADDMENRQSYYAPLALDSDICQRLELLISRFPL"
gene complement(3126375..3127724)
/gene="yghQ"
/locus_tag="SF3030"
/db_xref="GeneID:1026606"
CDS complement(3126375..3127724)
/gene="yghQ"
/locus_tag="SF3030"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708801.1"
/db_xref="GeneID:1026606"
/translation="MAGFNIKHWFADGAFRTIIRNSAWLGSSNVESALLGLLALSCAG
KGMTPAMFGVLVIVQSYAKSISDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFS
LDIVSGAVAIVGGIALLPFLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDR
FDLIAVQQATKPFLRAAGSVAAWYFDFGFVGFVIAWYVSNLVGGTMYWWFAARELRRR
NIHNAFKLNLFESARHIKGAWSFVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFK
IAMTFFDAAGTPAGLLGKSFYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLI
VGKPLISLVFGVKYLEAYDLIQVMLGAIVISMLGFPQESLLLMAGKQRAFLVAQTIAS
IGYIVLLFMFCHLFGVLGAAFAYFGGQCLDVALSLIPTLKAFFQRHSLLYNAAGEKS"
misc_feature complement(3126444..3127682)
/gene="yghQ"
/locus_tag="SF3030"
/note="Membrane protein involved in the export of
O-antigen and teichoic acid [Cell wall/membrane/envelope
biogenesis]; Region: RfbX; COG2244"
/db_xref="CDD:441845"
gene complement(3127770..3128528)
/gene="yghR"
/locus_tag="SF3031"
/db_xref="GeneID:1026595"
CDS complement(3127770..3128528)
/gene="yghR"
/locus_tag="SF3031"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708802.1"
/db_xref="GeneID:1026595"
/translation="MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKS
LQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAV
IMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMF
LAQRERSLYQKMAQYRPELIIRLGIDIDTAISRKPDHEYAELQDKIGVMSTIGYNGTK
ILEIDSRAPYSEVLEQVQKAVSLVAIVSDRRSLT"
misc_feature complement(3127812..3128462)
/gene="yghR"
/locus_tag="SF3031"
/note="Nucleoside/nucleotide kinase (NK) is a protein
superfamily consisting of multiple families of enzymes
that share structural similarity and are functionally
related to the catalysis of the reversible phosphate group
transfer from nucleoside triphosphates...; Region: NK;
cl17190"
/db_xref="CDD:450170"
misc_feature complement(order(3128421..3128432,3128445..3128447))
/gene="yghR"
/locus_tag="SF3031"
/note="active site"
/db_xref="CDD:238977"
gene complement(3128560..3129273)
/gene="yghS"
/locus_tag="SF3032"
/db_xref="GeneID:1026644"
CDS complement(3128560..3129273)
/gene="yghS"
/locus_tag="SF3032"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708803.1"
/db_xref="GeneID:1026644"
/translation="MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPT
EHIYLGQSSGRIGEWISQLPVIGAPCGCYLRSKAAHVHEKPLTPPGNITALVIYLLSC
WRAYKFRKMLCKSQQGYLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELK
LYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGR
QPADEIMQASLRAIHAALS"
misc_feature complement(3128572..3129231)
/gene="yghS"
/locus_tag="SF3032"
/note="Thymidine monophosphate kinase (TMPK), also known
as thymidylate kinase, catalyzes the phosphorylation of
thymidine monophosphate (TMP) to thymidine diphosphate
(TDP) utilizing ATP as its preferred phophoryl donor. TMPK
represents the rate-limiting step...; Region: TMPK;
cd01672"
/db_xref="CDD:238835"
misc_feature complement(order(3128704..3128706,3128875..3128877,
3128899..3128904,3128962..3128964,3128974..3128976,
3129190..3129192))
/gene="yghS"
/locus_tag="SF3032"
/note="TMP-binding site [active]"
/db_xref="CDD:238835"
misc_feature complement(order(3128623..3128625,3128716..3128718,
3129187..3129189))
/gene="yghS"
/locus_tag="SF3032"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238835"
gene 3129447..3130139
/gene="yghT"
/locus_tag="SF3033"
/db_xref="GeneID:1026650"
CDS 3129447..3130139
/gene="yghT"
/locus_tag="SF3033"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708804.1"
/db_xref="GeneID:1026650"
/translation="MQSITPPLIAVIGSDASGKSTVCEHLITVVEKYGAAERVHLGKQ
AGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLA
CRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDL
VIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEK
AITDFMTARGYH"
misc_feature 3129468..3130112
/gene="yghT"
/locus_tag="SF3033"
/note="Thymidine monophosphate kinase (TMPK), also known
as thymidylate kinase, catalyzes the phosphorylation of
thymidine monophosphate (TMP) to thymidine diphosphate
(TDP) utilizing ATP as its preferred phophoryl donor. TMPK
represents the rate-limiting step...; Region: TMPK;
cd01672"
/db_xref="CDD:238835"
misc_feature order(3129504..3129506,3129708..3129710,3129720..3129722,
3129783..3129788,3129810..3129812,3129978..3129980)
/gene="yghT"
/locus_tag="SF3033"
/note="TMP-binding site [active]"
/db_xref="CDD:238835"
misc_feature order(3129507..3129509,3129966..3129968,3130059..3130061)
/gene="yghT"
/locus_tag="SF3033"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238835"
gene complement(3130188..3131687)
/gene="pitB"
/locus_tag="SF3034"
/db_xref="GeneID:1025243"
CDS complement(3130188..3131687)
/gene="pitB"
/locus_tag="SF3034"
/note="Code: P; COG: COG0306"
/codon_start=1
/transl_table=11
/product="low-affinity phosphate transport protein"
/protein_id="NP_708805.1"
/db_xref="GeneID:1025243"
/translation="MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
TRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPIDLLLNMGSTHGLAMVFSMLL
AAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLI
VSPIVGLVIAGGLIFLLRRFWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSA
AGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQ
HPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSV
SQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVAL
ALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVL
SSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI"
misc_feature complement(3130191..3131687)
/gene="pitB"
/locus_tag="SF3034"
/note="Phosphate transporter family; Region: PHO4;
cl27575"
/db_xref="CDD:474944"
gene complement(3131979..3133838)
/gene="gsp"
/locus_tag="SF3035"
/db_xref="GeneID:1026646"
CDS complement(3131979..3133838)
/gene="gsp"
/locus_tag="SF3035"
/note="Code: E; COG: COG0754"
/codon_start=1
/transl_table=11
/product="bifunctional glutathionylspermidine
amidase/glutathionylspermidine synthetase"
/protein_id="NP_708806.2"
/db_xref="GeneID:1026646"
/translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN
KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK"
misc_feature complement(3131985..3133838)
/gene="gsp"
/locus_tag="SF3035"
/note="bifunctional glutathionylspermidine
amidase/glutathionylspermidine synthetase; Provisional;
Region: PRK10507"
/db_xref="CDD:182504"
gene 3133995..3134909
/locus_tag="SF3036"
/db_xref="GeneID:1026653"
CDS 3133995..3134909
/locus_tag="SF3036"
/note="Code: O; COG: COG0625"
/codon_start=1
/transl_table=11
/product="S-transferase"
/protein_id="NP_708807.1"
/db_xref="GeneID:1026653"
/translation="MTCYTASTLPLRRQLTMTDNTYQPAKVWTWDKSAGGAFANINRP
FSGPTHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGD
QFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETL
NWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAG
NEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNR
TNGPLNEQLHERHDASDFETNTEDKRQG"
misc_feature 3134043..3134834
/locus_tag="SF3036"
/note="putative S-transferase; Provisional; Region:
PRK11752"
/db_xref="CDD:183298"
gene complement(3135032..3135280)
/gene="hybG"
/locus_tag="SF3037"
/db_xref="GeneID:1026635"
CDS complement(3135032..3135280)
/gene="hybG"
/locus_tag="SF3037"
/note="Code: O; COG: COG0298"
/codon_start=1
/transl_table=11
/product="hydrogenase 2 accessory protein HypG"
/protein_id="NP_708808.1"
/db_xref="GeneID:1026635"
/translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
misc_feature complement(3135035..3135280)
/gene="hybG"
/locus_tag="SF3037"
/note="hydrogenase maturation factor HybG; Region:
PRK10413"
/db_xref="CDD:182438"
gene complement(3135414..3135755)
/gene="hypA"
/locus_tag="SF3038"
/db_xref="GeneID:1026631"
CDS complement(3135414..3135755)
/gene="hypA"
/locus_tag="SF3038"
/note="Code: R; COG: COG0375"
/codon_start=1
/transl_table=11
/product="hydrogenase nickel incorporation protein HybF"
/protein_id="NP_708809.2"
/db_xref="GeneID:1026631"
/translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG
DSLIVKSIEVE"
misc_feature complement(3135417..3135755)
/gene="hypA"
/locus_tag="SF3038"
/note="hydrogenase/urease nickel incorporation protein;
Region: PRK12380"
/db_xref="CDD:183485"
gene complement(3135748..3136236)
/gene="hybE"
/locus_tag="SF3039"
/db_xref="GeneID:1026648"
CDS complement(3135748..3136236)
/gene="hybE"
/locus_tag="SF3039"
/codon_start=1
/transl_table=11
/product="hydrogenase 2-specific chaperone"
/protein_id="NP_708810.1"
/db_xref="GeneID:1026648"
/translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRRGE
NA"
misc_feature complement(3135760..3136236)
/gene="hybE"
/locus_tag="SF3039"
/note="hydrogenase-2 assembly chaperone; Region: PRK10465"
/db_xref="CDD:182480"
gene complement(3136229..3136723)
/gene="hybD"
/locus_tag="SF3040"
/db_xref="GeneID:1026836"
CDS complement(3136229..3136723)
/gene="hybD"
/locus_tag="SF3040"
/note="Code: C; COG: COG0680"
/codon_start=1
/transl_table=11
/product="hydrogenase 2 maturation endopeptidase"
/protein_id="NP_708811.1"
/db_xref="GeneID:1026836"
/translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
AIHD"
misc_feature complement(3136232..3136723)
/gene="hybD"
/locus_tag="SF3040"
/note="HyaD/HybD family hydrogenase maturation
endopeptidase; Region: hybD; PRK10466"
/db_xref="CDD:182481"
misc_feature complement(order(3136598..3136606,3136652..3136654,
3136694..3136696))
/gene="hybD"
/locus_tag="SF3040"
/note="putative substrate-binding site [active]"
/db_xref="CDD:99873"
misc_feature complement(order(3136445..3136447,3136538..3136540,
3136676..3136678))
/gene="hybD"
/locus_tag="SF3040"
/note="nickel binding site [ion binding]; other site"
/db_xref="CDD:99873"
gene complement(3136723..3138426)
/gene="hybC"
/locus_tag="SF3041"
/db_xref="GeneID:1026601"
CDS complement(3136723..3138426)
/gene="hybC"
/locus_tag="SF3041"
/note="Code: C; COG: COG0374"
/codon_start=1
/transl_table=11
/product="hydrogenase 2 large subunit"
/protein_id="NP_708812.1"
/db_xref="GeneID:1026601"
/translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG
KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
L"
misc_feature complement(3136726..3138426)
/gene="hybC"
/locus_tag="SF3041"
/note="hydrogenase 2 large subunit; Provisional; Region:
PRK10467"
/db_xref="CDD:182482"
gene complement(3138423..3139601)
/gene="hybB"
/locus_tag="SF3042"
/db_xref="GeneID:1026636"
CDS complement(3138423..3139601)
/gene="hybB"
/locus_tag="SF3042"
/codon_start=1
/transl_table=11
/product="hydrogenase 2 b cytochrome subunit"
/protein_id="NP_708813.1"
/db_xref="GeneID:1026636"
/translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
VSLQRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIGLRFGELIYRDKLS
LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
VAFNPGGGYAYFPTWEELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
"
misc_feature complement(3138426..3139601)
/gene="hybB"
/locus_tag="SF3042"
/note="Ni/Fe-hydrogenase cytochrome b subunit; Region:
PRK10881"
/db_xref="CDD:236785"
gene complement(3139591..3140577)
/gene="hybA"
/locus_tag="SF3043"
/db_xref="GeneID:1026628"
CDS complement(3139591..3140577)
/gene="hybA"
/locus_tag="SF3043"
/note="Code: C; COG: COG0437"
/codon_start=1
/transl_table=11
/product="hydrogenase 2 protein HybA"
/protein_id="NP_708814.1"
/db_xref="GeneID:1026628"
/translation="MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDS
TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
misc_feature complement(3139594..3140577)
/gene="hybA"
/locus_tag="SF3043"
/note="hydrogenase 2 operon protein HybA; Region:
PRK10882"
/db_xref="CDD:236786"
gene complement(3140580..3141698)
/locus_tag="SF3044"
/db_xref="GeneID:1025036"
CDS complement(3140580..3141698)
/locus_tag="SF3044"
/note="Code: C; COG: COG1740"
/codon_start=1
/transl_table=11
/product="hydrogenase 2 small subunit"
/protein_id="NP_708815.1"
/db_xref="GeneID:1025036"
/translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGSAAIIAIGSCSAW
GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
FCDVGGVWPVAIGHPCYGCNEKGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
misc_feature complement(3140586..3141698)
/locus_tag="SF3044"
/note="hydrogenase 2 small subunit; Provisional; Region:
PRK10468"
/db_xref="CDD:182483"
gene complement(3141887..3142174)
/locus_tag="SF3045"
/db_xref="GeneID:1026642"
CDS complement(3141887..3142174)
/locus_tag="SF3045"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708816.1"
/db_xref="GeneID:1026642"
/translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
misc_feature complement(3141896..3142174)
/locus_tag="SF3045"
/note="Protein of unknown function (DUF2623); Region:
DUF2623; pfam11115"
/db_xref="CDD:431663"
gene complement(3142293..3143219)
/locus_tag="SF3046"
/db_xref="GeneID:1026652"
CDS complement(3142293..3143219)
/locus_tag="SF3046"
/note="Code: Q; COG: COG0412"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708817.3"
/db_xref="GeneID:1026652"
/translation="MLCLKKHQLRNATMPRLTAKDFPQELLDYYDYYVHGKISKREFL
NLAAKYAVGGMTALALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLV
KPAKMSGKTPAVGVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKG
RELQQQVDPTKLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACA
VPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGWPPYEAALKDNNKVYEAYIYPGVN
HGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS"
misc_feature complement(3142299..3143174)
/locus_tag="SF3046"
/note="YghX family hydrolase; Region: hydrolase_YghX;
NF041440"
/db_xref="CDD:469331"
gene 3143337..3144377
/locus_tag="SF3047"
/db_xref="GeneID:1026629"
CDS 3143337..3144377
/locus_tag="SF3047"
/note="Code: C; COG: COG0667"
/codon_start=1
/transl_table=11
/product="L-glyceraldehyde 3-phosphate reductase"
/protein_id="NP_708818.1"
/db_xref="GeneID:1026629"
/translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
RGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTEELAQIDQHIAD
GELNLWQASSDK"
misc_feature 3143337..3144374
/locus_tag="SF3047"
/note="L-glyceraldehyde 3-phosphate reductase;
Provisional; Region: PRK09912"
/db_xref="CDD:182140"
misc_feature order(3143427..3143435,3143439..3143441,3143517..3143519,
3143529..3143534,3143634..3143636,3143748..3143750,
3143838..3143840,3143913..3143915,3144000..3144017,
3144027..3144029,3144033..3144035,3144180..3144182,
3144231..3144245,3144255..3144257,3144264..3144269)
/locus_tag="SF3047"
/note="active site"
/db_xref="CDD:381376"
misc_feature order(3143517..3143519,3143532..3143534,3143625..3143627,
3143748..3143750)
/locus_tag="SF3047"
/note="catalytic tetrad [active]"
/db_xref="CDD:381376"
gene complement(3144417..3144911)
/gene="yqhA"
/locus_tag="SF3048"
/db_xref="GeneID:1026626"
CDS complement(3144417..3144911)
/gene="yqhA"
/locus_tag="SF3048"
/note="Code: S; COG: COG2862"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708819.2"
/db_xref="GeneID:1026626"
/translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN
IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLKWLGKMDA
TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
RHNH"
misc_feature complement(3144420..3144911)
/gene="yqhA"
/locus_tag="SF3048"
/note="Uncharacterized membrane protein YqhA [Function
unknown]; Region: YqhA; COG2862"
/db_xref="CDD:442109"
gene 3145102..3145986
/gene="yghA"
/locus_tag="SF3049"
/db_xref="GeneID:1026633"
CDS 3145102..3145986
/gene="yghA"
/locus_tag="SF3049"
/note="Code: QR; COG: COG1028"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_708820.1"
/db_xref="GeneID:1026633"
/translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPIPDCGEKTYVGS
GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
VFALFWLTQEAIPLLPKGASVITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA
EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQKTPMKRAGQPAELAPVYVYLASQE
SSYVTAEVHGVCGGEHLG"
misc_feature 3145102..3145983
/gene="yghA"
/locus_tag="SF3049"
/note="SDR family oxidoreductase; Region: PRK07985"
/db_xref="CDD:181188"
gene complement(3146258..3146683)
/gene="exbD"
/locus_tag="SF3050"
/db_xref="GeneID:1026651"
CDS complement(3146258..3146683)
/gene="exbD"
/locus_tag="SF3050"
/note="Code: N; COG: COG0848"
/codon_start=1
/transl_table=11
/product="biopolymer transport protein ExbD"
/protein_id="NP_708821.1"
/db_xref="GeneID:1026651"
/translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI
FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
misc_feature complement(3146261..3146683)
/gene="exbD"
/locus_tag="SF3050"
/note="biopolymer transport protein ExbD; Provisional;
Region: PRK11267"
/db_xref="CDD:183064"
gene complement(3146690..3147424)
/gene="exbB"
/locus_tag="SF3051"
/db_xref="GeneID:1026666"
CDS complement(3146690..3147424)
/gene="exbB"
/locus_tag="SF3051"
/note="Code: N; COG: COG0811"
/codon_start=1
/transl_table=11
/product="biopolymer transport protein ExbB"
/protein_id="NP_708822.1"
/db_xref="GeneID:1026666"
/translation="MGNNLMQTDLSVWGMYQYADIVVKCVMIGLILASVVTWAIFFSK
SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSD
DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
LQSRDLDLEASAAAHPVRVAQKLRAG"
misc_feature complement(3146693..3147424)
/gene="exbB"
/locus_tag="SF3051"
/note="biopolymer transporter ExbB; Region: PRK10414"
/db_xref="CDD:236685"
gene complement(3147417..3147572)
/locus_tag="SF3052"
/db_xref="GeneID:1026643"
CDS complement(3147417..3147572)
/locus_tag="SF3052"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708823.1"
/db_xref="GeneID:1026643"
/translation="MLVTFLLRKRKEKKAKVRQYANSNENDYQFDVVLILLCADFVTC
VLEIHSG"
gene 3147676..3148863
/gene="metC"
/locus_tag="SF3053"
/db_xref="GeneID:1026637"
CDS 3147676..3148863
/gene="metC"
/locus_tag="SF3053"
/note="Code: E; COG: COG0626"
/codon_start=1
/transl_table=11
/product="cystathionine beta-lyase"
/protein_id="NP_708824.1"
/db_xref="GeneID:1026637"
/translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFESMEAKKH
ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGD
HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW
LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNDEELANYLDNFSLF
SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA
RIV"
misc_feature 3147676..3148860
/gene="metC"
/locus_tag="SF3053"
/note="cystathionine beta-lyase; Provisional; Region:
PRK08114"
/db_xref="CDD:181231"
misc_feature order(3147763..3147774,3147778..3147783,3147841..3147843,
3147847..3147849,3147925..3147930,3147934..3147939,
3148006..3148008,3148021..3148023,3148030..3148032,
3148300..3148302,3148324..3148326,3148330..3148332,
3148378..3148380,3148408..3148410,3148414..3148419,
3148660..3148662)
/gene="metC"
/locus_tag="SF3053"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99738"
misc_feature order(3147928..3147936,3148006..3148008,3148135..3148137,
3148228..3148230,3148294..3148296,3148300..3148305,
3148330..3148332)
/gene="metC"
/locus_tag="SF3053"
/note="substrate-cofactor binding pocket [active]"
/db_xref="CDD:99738"
misc_feature order(3147928..3147936,3148006..3148008,3148228..3148230,
3148237..3148239,3148294..3148296,3148300..3148305)
/gene="metC"
/locus_tag="SF3053"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99738"
misc_feature 3148303..3148305
/gene="metC"
/locus_tag="SF3053"
/note="catalytic residue [active]"
/db_xref="CDD:99738"
gene 3149003..3149662
/gene="yghB"
/locus_tag="SF3054"
/db_xref="GeneID:1026624"
CDS 3149003..3149662
/gene="yghB"
/locus_tag="SF3054"
/note="Code: S; COG: COG0586"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708825.1"
/db_xref="GeneID:1026624"
/translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGSWLGNTKTVKGW
LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCN
A"
misc_feature 3149072..3149587
/gene="yghB"
/locus_tag="SF3054"
/note="Membrane integrity protein DedA, putative
transporter, DedA/Tvp38 family [Cell
wall/membrane/envelope biogenesis]; Region: DedA; COG0586"
/db_xref="CDD:440351"
gene complement(3149702..3150829)
/gene="yqhC"
/locus_tag="SF3056"
/db_xref="GeneID:1026627"
CDS complement(3149702..3150829)
/gene="yqhC"
/locus_tag="SF3056"
/note="Code: K; COG: COG2207"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="NP_708826.1"
/db_xref="GeneID:1026627"
/translation="MRVGVCRLKLFITCSLCWANMRAENDLPDVFHCDRQRPGSQCSF
LPMSCLFLQSAGEMLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSE
LLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPF
ECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCA
AERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI
ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK
ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN"
misc_feature complement(3150065..3150520)
/gene="yqhC"
/locus_tag="SF3056"
/note="AraC-type transcriptional regulator N-terminus;
Region: AraC_N; pfam06719"
/db_xref="CDD:461994"
misc_feature complement(3149738..3149983)
/gene="yqhC"
/locus_tag="SF3056"
/note="helix_turn_helix, arabinose operon control protein;
Region: HTH_ARAC; smart00342"
/db_xref="CDD:197666"
gene 3150795..3151958
/gene="yqhD"
/locus_tag="SF3055"
/db_xref="GeneID:1026664"
CDS 3150795..3151958
/gene="yqhD"
/locus_tag="SF3055"
/note="Code: C; COG: COG1979"
/codon_start=1
/transl_table=11
/product="aldehyde reductase"
/protein_id="NP_708827.2"
/db_xref="GeneID:1026664"
/translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT
GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK
FIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK
QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE
GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGTGVPQDWATHMLGHELTAM
HGLDHAQTLAIVLPALWNEKRETKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF
EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR"
misc_feature 3150795..3151955
/gene="yqhD"
/locus_tag="SF3055"
/note="alcohol dehydrogenase; Region: PRK15138"
/db_xref="CDD:185092"
misc_feature order(3150819..3150821,3150825..3150830,3150834..3150839,
3151458..3151460,3151470..3151472,3151518..3151523,
3151530..3151532)
/gene="yqhD"
/locus_tag="SF3055"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:341466"
misc_feature order(3150906..3150914,3150993..3150998,3151074..3151082,
3151089..3151091,3151206..3151211,3151218..3151220,
3151224..3151226,3151233..3151235,3151239..3151241,
3151245..3151247,3151272..3151274,3151329..3151331,
3151338..3151343,3151374..3151376,3151386..3151388,
3151593..3151595,3151635..3151637)
/gene="yqhD"
/locus_tag="SF3055"
/note="active site"
/db_xref="CDD:341466"
misc_feature order(3151374..3151376,3151386..3151388,3151593..3151595,
3151635..3151637)
/gene="yqhD"
/locus_tag="SF3055"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:341466"
gene 3152180..3152890
/gene="yqhE"
/locus_tag="SF3057"
/db_xref="GeneID:1026689"
CDS 3152180..3152890
/gene="yqhE"
/locus_tag="SF3057"
/note="Code: R; COG: COG0656"
/codon_start=1
/transl_table=11
/product="2,5-didehydrogluconate reductase A"
/protein_id="NP_708828.4"
/db_xref="GeneID:1026689"
/translation="MGYRSIDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHK
RPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQ
IHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQ
KVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGKI
AKLDQGKRLGPDPDQFGG"
misc_feature 3152183..3152887
/gene="yqhE"
/locus_tag="SF3057"
/note="2,5-didehydrogluconate reductase DkgA; Region:
dkgA; PRK11565"
/db_xref="CDD:183203"
misc_feature order(3152198..3152200,3152213..3152215,3152288..3152290,
3152381..3152383,3152474..3152479,3152540..3152542,
3152618..3152638,3152702..3152704,3152747..3152758,
3152771..3152773,3152780..3152785)
/gene="yqhE"
/locus_tag="SF3057"
/note="active site"
/db_xref="CDD:381357"
misc_feature order(3152198..3152200,3152213..3152215,3152288..3152290,
3152381..3152383)
/gene="yqhE"
/locus_tag="SF3057"
/note="catalytic tetrad [active]"
/db_xref="CDD:381357"
gene 3153090..3154016
/gene="yqhG"
/locus_tag="SF3058"
/db_xref="GeneID:1026676"
CDS 3153090..3154016
/gene="yqhG"
/locus_tag="SF3058"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708829.2"
/db_xref="GeneID:1026676"
/translation="MKIILLFLAALASFTVHAQPPSQTVEQTVRQIYQNYKSDASTPY
FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD
VDHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA
ALASLQKEQPESFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM
QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR
REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ"
misc_feature 3153162..3153518
/gene="yqhG"
/locus_tag="SF3058"
/note="Protein of unknown function (DUF3828); Region:
DUF3828; pfam12883"
/db_xref="CDD:403935"
gene 3154067..3154324
/gene="yqhH"
/locus_tag="SF3059"
/db_xref="GeneID:1026673"
CDS 3154067..3154324
/gene="yqhH"
/locus_tag="SF3059"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="NP_708830.1"
/db_xref="GeneID:1026673"
/translation="MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE
QDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE"
misc_feature 3154067..3154321
/gene="yqhH"
/locus_tag="SF3059"
/note="lipoprotein YqhH; Region: PRK09973"
/db_xref="CDD:170188"
gene complement(3154367..3156586)
/locus_tag="SF3060"
/db_xref="GeneID:1026838"
CDS complement(3154367..3156586)
/locus_tag="SF3060"
/note="Code: C; COG: COG1032"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708831.3"
/db_xref="GeneID:1026838"
/translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDS
CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
DVRNTAIIVKEALPGWSGVDSTRLDTLGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
VIVQPPRQKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
VWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF
CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYK
SEGVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
misc_feature complement(3154652..3156502)
/locus_tag="SF3060"
/note="uncharacterized radical SAM protein YgiQ; Region:
SAM_YgiQ; TIGR03904"
/db_xref="CDD:274847"
misc_feature complement(3154391..3154807)
/locus_tag="SF3060"
/note="Domain of unknown function (DUF3362); Region:
DUF3362; pfam11842"
/db_xref="CDD:432120"
gene complement(3156697..3158109)
/gene="sufI"
/locus_tag="SF3061"
/db_xref="GeneID:1026663"
CDS complement(3156697..3158109)
/gene="sufI"
/locus_tag="SF3061"
/note="Code: Q; COG: COG2132"
/codon_start=1
/transl_table=11
/product="FtsI repressor"
/protein_id="NP_708832.1"
/db_xref="GeneID:1026663"
/translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
SPYVEVSRGWVRLRLLNASNSRRYQLQMSDGRPLHVISGDQGFLPAPVSVKQLSLAPG
ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
SLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE
PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
QTLEMADRGSIGQLLVNPVP"
misc_feature complement(3156700..3158109)
/gene="sufI"
/locus_tag="SF3061"
/note="FtsI repressor; Provisional; Region: PRK10883"
/db_xref="CDD:182808"
gene complement(3158184..3158921)
/gene="plsC"
/locus_tag="SF3062"
/db_xref="GeneID:1026672"
CDS complement(3158184..3158921)
/gene="plsC"
/locus_tag="SF3062"
/note="Code: I; COG: COG0204"
/codon_start=1
/transl_table=11
/product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
/protein_id="NP_708833.1"
/db_xref="GeneID:1026672"
/translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP
FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
AHCRSIMEQKIAELDKEVAEREAAGKV"
misc_feature complement(3158187..3158921)
/gene="plsC"
/locus_tag="SF3062"
/note="1-acyl-sn-glycerol-3-phosphate acyltransferase;
Provisional; Region: PRK15018"
/db_xref="CDD:184979"
misc_feature complement(order(3158472..3158480,3158631..3158642,
3158688..3158690,3158694..3158696,3158703..3158705))
/gene="plsC"
/locus_tag="SF3062"
/note="putative acyl-acceptor binding pocket [active]"
/db_xref="CDD:153251"
gene complement(3159155..3161413)
/gene="parC"
/locus_tag="SF3063"
/db_xref="GeneID:1026670"
CDS complement(3159155..3161413)
/gene="parC"
/locus_tag="SF3063"
/note="Code: L; COG: COG0188"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase IV subunit A"
/protein_id="NP_708834.1"
/db_xref="GeneID:1026670"
/translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
LASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMG
WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG
EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
SPRRASSGDSEE"
misc_feature complement(3159200..3161401)
/gene="parC"
/locus_tag="SF3063"
/note="DNA topoisomerase IV, A subunit, proteobacterial;
Region: parC_Gneg; TIGR01062"
/db_xref="CDD:130134"
misc_feature complement(3159800..3159919)
/gene="parC"
/locus_tag="SF3063"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
misc_feature complement(3159653..3159793)
/gene="parC"
/locus_tag="SF3063"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
misc_feature complement(3159506..3159640)
/gene="parC"
/locus_tag="SF3063"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
misc_feature complement(3159335..3159496)
/gene="parC"
/locus_tag="SF3063"
/note="GyrA_CTD repeat [structural motif]; Region:
GyrA_CTD repeat"
/db_xref="CDD:293790"
gene complement(3161959..3162441)
/locus_tag="SF3064"
/db_xref="GeneID:1026682"
CDS complement(3161959..3162441)
/locus_tag="SF3064"
/note="Code: L; COG: COG3449"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708835.1"
/db_xref="GeneID:1026682"
/translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
GLSPVNQSQTFGVAWDAPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
RHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA
"
misc_feature complement(3161962..>3162429)
/locus_tag="SF3064"
/note="DNA gyrase inhibitor GyrI/SbmC [Replication,
recombination and repair]; Region: SbmC; COG3449"
/db_xref="CDD:442672"
gene complement(3162494..3162886)
/gene="ygiW"
/locus_tag="SF3065"
/db_xref="GeneID:1024418"
CDS complement(3162494..3162886)
/gene="ygiW"
/locus_tag="SF3065"
/note="Code: S; COG: COG3111"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708836.2"
/db_xref="GeneID:1024418"
/translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSVTQSQAGGFQGPNG
SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
misc_feature complement(3162506..3162883)
/gene="ygiW"
/locus_tag="SF3065"
/note="TIGR00156 family protein; Region: TIGR00156"
/db_xref="CDD:129260"
gene 3163038..3163697
/gene="ygiX"
/locus_tag="SF3066"
/db_xref="GeneID:1026634"
CDS 3163038..3163697
/gene="ygiX"
/locus_tag="SF3066"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator QseB"
/protein_id="NP_708837.1"
/db_xref="GeneID:1026634"
/translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
YDAVILDLTLPGMDGRDILREWREKGQREPVLNLTARDALAERVEGLRLGADDYLCKP
FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL
LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
K"
misc_feature 3163038..3163694
/gene="ygiX"
/locus_tag="SF3066"
/note="two-component system response regulator QseB;
Region: PRK10336"
/db_xref="CDD:182387"
gene 3163694..3164968
/gene="ygiY"
/locus_tag="SF3067"
/db_xref="GeneID:1026638"
CDS 3163694..3164968
/gene="ygiY"
/locus_tag="SF3067"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="sensor protein QseC"
/protein_id="NP_708838.1"
/db_xref="GeneID:1026638"
/translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDG
DNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV
AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRP
LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
VRLTLNAHGIKRTGQPLLLSLLVRNLLDNGPGVTPEALARIGERFYRPPGQTATGSGL
GLSIVQRIAKLHDMNVEFGNAEQGGFEAKVSW"
misc_feature 3163694..3164965
/gene="ygiY"
/locus_tag="SF3067"
/note="sensor protein QseC; Provisional; Region: PRK10337"
/db_xref="CDD:182388"
gene complement(3165014..3165346)
/locus_tag="SF3067a"
/db_xref="GeneID:16608358"
CDS complement(3165014..3165346)
/locus_tag="SF3067a"
/codon_start=1
/transl_table=11
/product="membrane protein"
/protein_id="YP_008439282.1"
/db_xref="GeneID:16608358"
/translation="MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICS
IPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMREMFEFWLYVFSLVICLVCGWWLF
WGRFIFCY"
gene 3165665..3166246
/gene="mdaB"
/locus_tag="SF3068"
/db_xref="GeneID:1026839"
CDS 3165665..3166246
/gene="mdaB"
/locus_tag="SF3068"
/note="Code: R; COG: COG2249"
/codon_start=1
/transl_table=11
/product="modulator of drug activity B"
/protein_id="NP_708839.1"
/db_xref="GeneID:1026839"
/translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
DSDYNVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
DPSKKYGSGSLVQDKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM
EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG"
misc_feature 3165668..3166228
/gene="mdaB"
/locus_tag="SF3068"
/note="Flavodoxin-like fold; Region: Flavodoxin_2;
pfam02525"
/db_xref="CDD:426816"
gene 3166277..3166591
/gene="ygiN"
/locus_tag="SF3069"
/db_xref="GeneID:1026660"
CDS 3166277..3166591
/gene="ygiN"
/locus_tag="SF3069"
/note="Code: S; COG: COG1359"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708840.1"
/db_xref="GeneID:1026660"
/translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
GI"
misc_feature 3166280..3166579
/gene="ygiN"
/locus_tag="SF3069"
/note="Quinol monooxygenase YgiN [Energy production and
conversion]; Region: YgiN; COG1359"
/db_xref="CDD:440970"
gene complement(3166639..3168531)
/gene="parE"
/locus_tag="SF3070"
/db_xref="GeneID:1026661"
CDS complement(3166639..3168531)
/gene="parE"
/locus_tag="SF3070"
/note="Code: L; COG: COG0187"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase IV subunit B"
/protein_id="NP_708841.2"
/db_xref="GeneID:1026661"
/translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRN
TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
SGPALPGKLADCTAQGLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL
GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
MAEIEV"
misc_feature complement(3166654..3168528)
/gene="parE"
/locus_tag="SF3070"
/note="DNA topoisomerase IV, B subunit, proteobacterial;
Region: parE_Gneg; TIGR01055"
/db_xref="CDD:130127"
gene complement(3168560..3169141)
/gene="yqiA"
/locus_tag="SF3071"
/db_xref="GeneID:1026678"
CDS complement(3168560..3169141)
/gene="yqiA"
/locus_tag="SF3071"
/note="Code: R; COG: COG3150"
/codon_start=1
/transl_table=11
/product="esterase"
/protein_id="NP_708842.1"
/db_xref="GeneID:1026678"
/translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
misc_feature complement(3168572..3169141)
/gene="yqiA"
/locus_tag="SF3071"
/note="esterase YqiA; Provisional; Region: PRK11071"
/db_xref="CDD:182945"
gene complement(3169141..3169968)
/gene="icc"
/locus_tag="SF3072"
/db_xref="GeneID:1026679"
CDS complement(3169141..3169968)
/gene="icc"
/locus_tag="SF3072"
/note="Code: R; COG: COG1409"
/codon_start=1
/transl_table=11
/product="cyclic 3',5'-adenosine monophosphate
phosphodiesterase"
/protein_id="NP_708843.1"
/db_xref="GeneID:1026679"
/translation="MESLLTLPLAGEARGRILQITDTHLFAQKHEALLGVNTWESYQA
VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
misc_feature complement(3169144..3169968)
/gene="icc"
/locus_tag="SF3072"
/note="cyclic 3',5'-adenosine monophosphate
phosphodiesterase; Provisional; Region: PRK11148"
/db_xref="CDD:182997"
misc_feature complement(order(3169294..3169296,3169354..3169356,
3169360..3169362,3169477..3169479,3169684..3169689,
3169768..3169770,3169777..3169779,3169897..3169899,
3169903..3169905))
/gene="icc"
/locus_tag="SF3072"
/note="active site"
/db_xref="CDD:277347"
misc_feature complement(order(3169354..3169356,3169360..3169362,
3169477..3169479,3169687..3169689,3169777..3169779,
3169897..3169899,3169903..3169905))
/gene="icc"
/locus_tag="SF3072"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:277347"
misc_feature complement(order(3169213..3169215,3169219..3169221,
3169228..3169230,3169315..3169317,3169321..3169329,
3169336..3169350,3169369..3169371,3169375..3169377,
3169456..3169461,3169465..3169467,3169732..3169734,
3169759..3169761,3169768..3169770,3169825..3169830,
3169837..3169842,3169849..3169851,3169858..3169860))
/gene="icc"
/locus_tag="SF3072"
/note="homohexamer interface [polypeptide binding]; other
site"
/db_xref="CDD:277347"
gene complement(3169993..3170415)
/gene="yqiB"
/locus_tag="SF3073"
/db_xref="GeneID:1026665"
CDS complement(3169993..3170415)
/gene="yqiB"
/locus_tag="SF3073"
/note="Code: S; COG: COG3151"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="NP_708844.1"
/db_xref="GeneID:1026665"
/translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
YRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY
DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
misc_feature complement(3169996..3170415)
/gene="yqiB"
/locus_tag="SF3073"
/note="DUF1249 family protein; Region: PRK11039"
/db_xref="CDD:182921"
gene complement(3170416..3171045)
/gene="nudF"
/locus_tag="SF3074"
/db_xref="GeneID:1026699"
CDS complement(3170416..3171045)
/gene="nudF"
/locus_tag="SF3074"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="ADP-ribose pyrophosphatase"
/protein_id="NP_708845.1"
/db_xref="GeneID:1026699"
/translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQ
MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA"
misc_feature complement(3170419..3171021)
/gene="nudF"
/locus_tag="SF3074"
/note="ADP-ribose pyrophosphatase NudF; Provisional;
Region: nudF; PRK10729"
/db_xref="CDD:182682"
gene 3171250..3172731
/gene="tolC"
/locus_tag="SF3075"
/db_xref="GeneID:1026668"
CDS 3171250..3172731
/gene="tolC"
/locus_tag="SF3075"
/note="Code: MN; COG: COG1538"
/codon_start=1
/transl_table=11
/product="outer membrane channel protein"
/protein_id="NP_708846.2"
/db_xref="GeneID:1026668"
/translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSK
WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLEREQIRQAQDGHLPTLDLTAST
GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
SEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
misc_feature 3171250..3172602
/gene="tolC"
/locus_tag="SF3075"
/note="outer membrane channel protein; Reviewed; Region:
tolC; PRK09465"
/db_xref="CDD:236529"
gene 3172731..3172991
/gene="ygiA"
/locus_tag="SF3076"
/db_xref="GeneID:1023552"
CDS 3172731..3172991
/gene="ygiA"
/locus_tag="SF3076"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708847.1"
/db_xref="GeneID:1023552"
/translation="MTTTGLRPRLNVRQRKDTGYLPHSSPFSLQFRPAILYSDGYLPL
VPEDKNETDKIHTPRIVPQKLERTPSDTSRSRGCHCFYAGWL"
gene 3172846..3173550
/gene="ygiB"
/locus_tag="SF3077"
/db_xref="GeneID:1026662"
CDS 3172846..3173550
/gene="ygiB"
/locus_tag="SF3077"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708848.4"
/db_xref="GeneID:1026662"
/translation="MGIYHWSRKTKMKRTKSIRHASFRKNWSARHLTPVALAVATVFM
LAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAE
FGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSS
KNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQS
TMQRSATGTSSRSMGG"
misc_feature 3172879..3173547
/gene="ygiB"
/locus_tag="SF3077"
/note="DUF1190 family protein; Region: PRK11653"
/db_xref="CDD:236948"
gene 3173556..3174716
/gene="ygiC"
/locus_tag="SF3078"
/db_xref="GeneID:1026667"
CDS 3173556..3174716
/gene="ygiC"
/locus_tag="SF3078"
/note="Code: E; COG: COG0754"
/codon_start=1
/transl_table=11
/product="synthetase/amidase"
/protein_id="NP_708849.1"
/db_xref="GeneID:1026667"
/translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQ
VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDEIGLGEKGQ
FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE"
misc_feature 3173556..3174713
/gene="ygiC"
/locus_tag="SF3078"
/note="Glutathionylspermidine synthase, CHAP domain [Amino
acid transport and metabolism]; Region: Gsp; COG0754"
/db_xref="CDD:440517"
gene complement(3174754..3175569)
/gene="ygiD"
/locus_tag="SF3079"
/db_xref="GeneID:1026654"
CDS complement(3174754..3175569)
/gene="ygiD"
/locus_tag="SF3079"
/note="Code: S; COG: COG3384"
/codon_start=1
/transl_table=11
/product="LigB family dioxygenase"
/protein_id="NP_708850.1"
/db_xref="GeneID:1026654"
/translation="MTPLVKDIIMSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMT
LPRPQAIVVVSAHWFTRGTGVTAMETPLTIHDFGGFPQALYDTHYPAPGSPALAQRLV
ELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLA
ALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVN
YLDHEGGALSNPTPEHYLPLLYVLGVWDGQEPITIPVDGIEMGSLSMLSVQIG"
misc_feature complement(order(3174781..3174786,3174868..3174870,
3175039..3175041,3175207..3175209,3175399..3175401,
3175498..3175506))
/gene="ygiD"
/locus_tag="SF3079"
/note="putative active site [active]"
/db_xref="CDD:153375"
misc_feature complement(order(3174868..3174870,3175399..3175401,
3175504..3175506))
/gene="ygiD"
/locus_tag="SF3079"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:153375"
misc_feature complement(3174757..3175494)
/gene="ygiD"
/locus_tag="SF3079"
/note="LigB family dioxygenase; Provisional; Region:
PRK10628"
/db_xref="CDD:182598"
gene 3175685..3176458
/gene="ygiE"
/locus_tag="SF3080"
/db_xref="GeneID:1026695"
CDS 3175685..3176458
/gene="ygiE"
/locus_tag="SF3080"
/note="Code: P; COG: COG0428"
/codon_start=1
/transl_table=11
/product="zinc transporter ZupT"
/protein_id="NP_708851.2"
/db_xref="GeneID:1026695"
/translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
LLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQLLP
KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVD
ELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
misc_feature 3175685..3176440
/gene="ygiE"
/locus_tag="SF3080"
/note="zinc transporter ZupT; Provisional; Region:
PRK04201"
/db_xref="CDD:235253"
gene complement(3176516..3176710)
/locus_tag="SF3080a"
/db_xref="GeneID:16608359"
CDS complement(3176516..3176710)
/locus_tag="SF3080a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439283.1"
/db_xref="GeneID:16608359"
/translation="MLNIKGKRMFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDAL
LEARNKYLNSTREETAEKVE"
gene complement(3176947..3177600)
/gene="ribB"
/locus_tag="SF3081"
/db_xref="GeneID:1026655"
CDS complement(3176947..3177600)
/gene="ribB"
/locus_tag="SF3081"
/note="Code: H; COG: COG0108"
/codon_start=1
/transl_table=11
/product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
/protein_id="NP_708852.1"
/db_xref="GeneID:1026655"
/translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
misc_feature complement(3176968..3177570)
/gene="ribB"
/locus_tag="SF3081"
/note="3,4-dihydroxy-2-butanone 4-phosphate synthase
[Coenzyme transport and metabolism]; Region: RibB;
COG0108"
/db_xref="CDD:439878"
gene 3177914..3178264
/locus_tag="SF3082"
/db_xref="GeneID:1026698"
CDS 3177914..3178264
/locus_tag="SF3082"
/note="Code: S; COG: COG2960"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708853.1"
/db_xref="GeneID:1026698"
/translation="MTYPYRTTMVLNTYQYRETTMIDPKKIEQIARQVHESMPKGIRE
FGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRISELENRSTE
IKKQPDPETLPPTL"
misc_feature 3177974..3178210
/locus_tag="SF3082"
/note="Ubiquinone biosynthesis accessory factor UbiK
[Coenzyme transport and metabolism]; Region: UbiK;
COG2960"
/db_xref="CDD:442200"
mobile_element 3178429..3179689
/note="partial"
/mobile_element_type="insertion sequence:IS2"
gene 3178475..3178885
/locus_tag="SF3083"
/db_xref="GeneID:1026669"
CDS 3178475..3178885
/locus_tag="SF3083"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_708854.3"
/db_xref="GeneID:1026669"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMKNELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 3178520..3178882
/locus_tag="SF3083"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 3178843..3179694
/locus_tag="SF3084"
/db_xref="GeneID:1026645"
CDS 3178843..3179694
/locus_tag="SF3084"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion element IS2 transposase InsD"
/protein_id="NP_708855.1"
/db_xref="GeneID:1026645"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPRG"
misc_feature 3178843..3179688
/locus_tag="SF3084"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
mobile_element 3179690..3180457
/mobile_element_type="insertion sequence:IS1"
gene 3179745..3180020
/gene="insA"
/locus_tag="SF3085"
/db_xref="GeneID:1026680"
CDS 3179745..3180020
/gene="insA"
/locus_tag="SF3085"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708856.1"
/db_xref="GeneID:1026680"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 3179766..>3180017
/gene="insA"
/locus_tag="SF3085"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3180047..3180442
/gene="insB"
/locus_tag="SF3086"
/db_xref="GeneID:1027391"
CDS 3180047..3180442
/gene="insB"
/locus_tag="SF3086"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708857.1"
/db_xref="GeneID:1027391"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 3180050..3180439
/gene="insB"
/locus_tag="SF3086"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
mobile_element 3180458..3180741
/note="partial"
/mobile_element_type="insertion sequence:IS4"
gene 3180748..3181071
/gene="yqiI"
/locus_tag="SF3088"
/pseudo
/db_xref="GeneID:1026705"
misc_feature 3180748..3181071
/gene="yqiI"
/locus_tag="SF3088"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789427 (355 aa). BLAST with
identity of 95% in 108 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(3181114..3181314)
/gene="glgS"
/locus_tag="SF3089"
/db_xref="GeneID:1026658"
CDS complement(3181114..3181314)
/gene="glgS"
/locus_tag="SF3089"
/codon_start=1
/transl_table=11
/product="glycogen synthesis protein GlgS"
/protein_id="NP_708859.2"
/db_xref="GeneID:1026658"
/translation="MEHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTW
FCARYAWYCQQMMQARELELEH"
misc_feature complement(3181117..3181314)
/gene="glgS"
/locus_tag="SF3089"
/note="Glycogen synthesis protein; Region: GlgS;
pfam08971"
/db_xref="CDD:401064"
mobile_element 3181581..3182348
/mobile_element_type="insertion sequence:IS1"
gene 3181636..3182333
/gene="insB"
/locus_tag="SF3090"
/pseudogene="unknown"
/db_xref="GeneID:1026657"
gene 3182349..3183258
/locus_tag="SF3091"
/pseudo
/db_xref="GeneID:1026717"
misc_feature 3182349..3183258
/locus_tag="SF3091"
/note="Similar to Escherichia coli K12 membrane protein
gi: 1789430 (554 aa). BLAST with identity of 96% in 303
aa. This CDS has been truncated. The sequence has been
checked and is believed to be correct."
/pseudo
gene complement(3184444..3185877)
/locus_tag="SF3093"
/db_xref="GeneID:1026686"
CDS complement(3184444..3185877)
/locus_tag="SF3093"
/note="Code: M; COG: COG2870"
/codon_start=1
/transl_table=11
/product="bifunctional heptose 7-phosphate kinase/heptose
1-phosphate adenyltransferase"
/protein_id="NP_708862.1"
/db_xref="GeneID:1026686"
/translation="MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP
TITKLRVLSRNQQLIRLDFEEGFEGVDPQPMHERINQALSSIGALVLSDYAKGALASV
QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA
ARKRGEKVVMTNGVFDILHAGHVFYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
GEVLVLNFEDGCSTTNIIKKIQQDKKG"
misc_feature complement(3184459..3185877)
/locus_tag="SF3093"
/note="bifunctional
D-glycero-beta-D-manno-heptose-7-phosphate
kinase/D-glycero-beta-D-manno-heptose 1-phosphate
adenylyltransferase HldE; Region: PRK11316"
/db_xref="CDD:183085"
gene complement(3185925..3188765)
/gene="glnE"
/locus_tag="SF3094"
/db_xref="GeneID:1026840"
CDS complement(3185925..3188765)
/gene="glnE"
/locus_tag="SF3094"
/note="Code: OT; COG: COG1391"
/codon_start=1
/transl_table=11
/product="bifunctional glutamine-synthetase
adenylyltransferase/deadenyltransferase"
/protein_id="NP_708863.2"
/db_xref="GeneID:1026840"
/translation="MKPLSSPLQQYWQTVVERLPELLAEESLSAQAKSVLTFSDFVQD
SVIAHPEWLTELESQPPQADEWQHYSVWLQEALSNVSDEAGLMRELRLFRRRIMVRIA
WAQTLALVTEESILQQLSYLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF
VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
LIRGGREPLLQSRSLLPTLSAIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTMIADFRKELDKRTIGPRGRQVLDHLM
PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA
SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ
LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWGQMVARYGKPNHLNEREGRG
FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFS
TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ
LTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHRNRFDIKADEGGITDIE
FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
ALQELPGHVSEDCFTAERDLVRASWQKWLVEE"
misc_feature complement(3185934..3188765)
/gene="glnE"
/locus_tag="SF3094"
/note="bifunctional [glutamate--ammonia
ligase]-adenylyl-L-tyrosine
phosphorylase/[glutamate--ammonia-ligase]
adenylyltransferase; Region: PRK11072"
/db_xref="CDD:236836"
gene complement(3188788..3190089)
/gene="ygiF"
/locus_tag="SF3095"
/db_xref="GeneID:1026707"
CDS complement(3188788..3190089)
/gene="ygiF"
/locus_tag="SF3095"
/note="Code: S; COG: COG3025"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708864.1"
/db_xref="GeneID:1026707"
/translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
DNWLRRHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEI
WPNGELPADLASRVQSLFSTDFYREKWLVEIDGSRIEIALDQGEVKAGEFAEPICELE
LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
ADVEQGLEAALELVLAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKA
STHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKI
SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLMRDIDSILLLAGYYDPVVAQ
AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
misc_feature complement(3189316..3190089)
/gene="ygiF"
/locus_tag="SF3095"
/note="Inorganic triphosphatase YgiF, contains CYTH and
CHAD domains [Inorganic ion transport and metabolism];
Region: PPPi; COG3025"
/db_xref="CDD:442261"
gene 3190331..3190951
/gene="ygiM"
/locus_tag="SF3096"
/db_xref="GeneID:1026697"
CDS 3190331..3190951
/gene="ygiM"
/locus_tag="SF3096"
/note="Code: T; COG: COG3103"
/codon_start=1
/transl_table=11
/product="SH3 domain-containing protein"
/protein_id="NP_708865.1"
/db_xref="GeneID:1026697"
/translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY
RLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV
KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV
QLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN"
misc_feature 3190331..3190948
/gene="ygiM"
/locus_tag="SF3096"
/note="SH3 domain-containing protein; Provisional; Region:
PRK10884"
/db_xref="CDD:182809"
gene 3191015..3192253
/gene="cca"
/locus_tag="SF3097"
/db_xref="GeneID:1026690"
CDS 3191015..3192253
/gene="cca"
/locus_tag="SF3097"
/note="Code: J; COG: COG0617"
/codon_start=1
/transl_table=11
/product="multifunctional tRNA nucleotidyl
transferase/2'3'-cyclic
phosphodiesterase/2'nucleotidase/phosphatase"
/protein_id="NP_708866.1"
/db_xref="GeneID:1026690"
/translation="MKIYLVGGAVRDALLGLSVKDRDWVVVGSTPQEMLDAGYQQVGR
DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYTAPDVTLEDDLKRRDLTINALAQDD
NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLM
REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA
PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIRTFPMLNPKTIVKLFDSIDAWRKPQR
VEQLALTSEADVRGRTGFESADYPQGRWLREGWEVAQSVPTKAVVEAGFKGVEIREEL
TRRRIAAVASWKEQRCPKPD"
misc_feature 3191015..3192241
/gene="cca"
/locus_tag="SF3097"
/note="multifunctional CCA addition/repair protein;
Region: cca; PRK10885"
/db_xref="CDD:182810"
gene complement(3192416..3193237)
/gene="uppP"
/locus_tag="SF3098"
/db_xref="GeneID:1026703"
CDS complement(3192416..3193237)
/gene="uppP"
/locus_tag="SF3098"
/note="Code: S; COG: COG1968"
/codon_start=1
/transl_table=11
/product="undecaprenyl pyrophosphate phosphatase"
/protein_id="NP_708867.2"
/db_xref="GeneID:1026703"
/translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
misc_feature complement(3192419..3193231)
/gene="uppP"
/locus_tag="SF3098"
/note="undecaprenyl-diphosphate phosphatase; Region:
PRK00281"
/db_xref="CDD:234712"
gene complement(3193328..3193696)
/gene="folB"
/locus_tag="SF3099"
/db_xref="GeneID:1026693"
CDS complement(3193328..3193696)
/gene="folB"
/locus_tag="SF3099"
/note="Code: H; COG: COG1539"
/codon_start=1
/transl_table=11
/product="bifunctional dihydroneopterin
aldolase/dihydroneopterin triphosphate 2'-epimerase"
/protein_id="NP_708868.2"
/db_xref="GeneID:1026693"
/translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
ARAANVGVIIERGNNLKENN"
misc_feature complement(3193340..3193696)
/gene="folB"
/locus_tag="SF3099"
/note="bifunctional dihydroneopterin
aldolase/7,8-dihydroneopterin epimerase; Region: folB;
PRK11593"
/db_xref="CDD:183219"
misc_feature complement(order(3193361..3193387,3193394..3193399,
3193619..3193645,3193661..3193693))
/gene="folB"
/locus_tag="SF3099"
/note="homooctamer interface [polypeptide binding]; other
site"
/db_xref="CDD:238298"
misc_feature complement(order(3193367..3193369,3193403..3193405,
3193478..3193489,3193634..3193636,3193643..3193651))
/gene="folB"
/locus_tag="SF3099"
/note="active site"
/db_xref="CDD:238298"
gene 3193801..3194418
/gene="ygiH"
/locus_tag="SF3100"
/db_xref="GeneID:1026683"
CDS 3193801..3194418
/gene="ygiH"
/locus_tag="SF3100"
/note="Code: S; COG: COG0344"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate acyltransferase PlsY"
/protein_id="NP_708869.1"
/db_xref="GeneID:1026683"
/translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
KGGKGVATAFGAIAPISWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
misc_feature 3193801..3194388
/gene="ygiH"
/locus_tag="SF3100"
/note="glycerol-3-phosphate 1-O-acyltransferase PlsY;
Region: PRK00220"
/db_xref="CDD:234691"
gene complement(3194361..3195362)
/gene="ygiP"
/locus_tag="SF3101"
/db_xref="GeneID:1026706"
CDS complement(3194361..3195362)
/gene="ygiP"
/locus_tag="SF3101"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="transcriptional activator TtdR"
/protein_id="NP_708870.1"
/db_xref="GeneID:1026706"
/translation="MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQIL
ENTLATTLLNRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGC
SFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAH
LLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVK
VSGHLSSNSGEIVLQWALEGKGIMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYR
ELLYRSMKFVSARNFWRHGASNGWASPMKAIRSCRSTRNHSGSFSRFLLNFVQIFVS"
misc_feature complement(3194433..3195362)
/gene="ygiP"
/locus_tag="SF3101"
/note="LysR family transcriptional regulator; Region:
PRK09801"
/db_xref="CDD:182085"
gene 3195572..3196381
/gene="ttdA"
/locus_tag="SF3102"
/db_xref="GeneID:1026711"
CDS 3195572..3196381
/gene="ttdA"
/locus_tag="SF3102"
/note="Code: C; COG: COG1951"
/codon_start=1
/transl_table=11
/product="tartrate dehydratase subunit alpha"
/protein_id="NP_708871.2"
/db_xref="GeneID:1026711"
/translation="MSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAET
SSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEE
ATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGR
SKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIG
SRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGASSRHAAGSCRSHL"
misc_feature 3195584..3196375
/gene="ttdA"
/locus_tag="SF3102"
/note="tartrate dehydratase subunit alpha; Validated;
Region: PRK08230"
/db_xref="CDD:181309"
gene 3196409..3197014
/gene="ttdB"
/locus_tag="SF3103"
/db_xref="GeneID:1023469"
CDS 3196409..3197014
/gene="ttdB"
/locus_tag="SF3103"
/note="Code: C; COG: COG1838"
/codon_start=1
/transl_table=11
/product="L(+)-tartrate dehydratase subunit beta"
/protein_id="NP_708872.1"
/db_xref="GeneID:1023469"
/translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK
RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGK
GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEF
GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK"
misc_feature 3196409..3197011
/gene="ttdB"
/locus_tag="SF3103"
/note="L(+)-tartrate dehydratase subunit beta; Validated;
Region: PRK08228"
/db_xref="CDD:236192"
gene 3197062..3198525
/gene="ygjE"
/locus_tag="SF3104"
/db_xref="GeneID:1026696"
CDS 3197062..3198525
/gene="ygjE"
/locus_tag="SF3104"
/note="Code: P; COG: COG0471"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708873.1"
/db_xref="GeneID:1026696"
/translation="MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVI
VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSV
IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL
QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN
KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVTLIVVFYLLRY
FFASATAYTCALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
misc_feature 3197071..3198522
/gene="ygjE"
/locus_tag="SF3104"
/note="Sodium:sulfate symporter transmembrane region;
Region: Na_sulph_symp; pfam00939"
/db_xref="CDD:279307"
misc_feature order(3197359..3197412,3197482..3197526,3197530..3197535,
3197539..3197550,3197554..3197571,3197578..3197601,
3197617..3197622,3197641..3197658,3197659..3197703,
3197767..3197769,3197770..3197808,3197821..3197838,
3197929..3197949,3197971..3198000,3198007..3198021,
3198067..3198123,3198196..3198243,3198298..3198327,
3198334..3198363,3198451..3198489)
/gene="ygjE"
/locus_tag="SF3104"
/note="transmembrane helices; other site"
/db_xref="CDD:238535"
gene complement(3198567..3199580)
/gene="ygjD"
/locus_tag="SF3105"
/db_xref="GeneID:1026694"
CDS complement(3198567..3199580)
/gene="ygjD"
/locus_tag="SF3105"
/note="Code: O; COG: COG0533"
/codon_start=1
/transl_table=11
/product="UGMP family protein"
/protein_id="NP_708874.1"
/db_xref="GeneID:1026694"
/translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
PAA"
misc_feature complement(3198588..3199580)
/gene="ygjD"
/locus_tag="SF3105"
/note="tRNA A37 threonylcarbamoyltransferase TsaD
[Translation, ribosomal structure and biogenesis]; Region:
TsaD; COG0533"
/db_xref="CDD:440299"
gene 3199818..3200033
/gene="rpsU"
/locus_tag="SF3106"
/db_xref="GeneID:1027192"
CDS 3199818..3200033
/gene="rpsU"
/locus_tag="SF3106"
/note="Code: J; COG: COG0828"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S21"
/protein_id="NP_708875.1"
/db_xref="GeneID:1027192"
/translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
RKRAKASAVKRHAKKLARENARRTRLY"
misc_feature 3199818..3200003
/gene="rpsU"
/locus_tag="SF3106"
/note="Ribosomal protein S21 [Translation, ribosomal
structure and biogenesis]; Region: RpsU; COG0828"
/db_xref="CDD:440590"
gene 3200144..3201889
/gene="dnaG"
/locus_tag="SF3107"
/db_xref="GeneID:1026671"
CDS 3200144..3201889
/gene="dnaG"
/locus_tag="SF3107"
/note="Code: L; COG: COG0358"
/codon_start=1
/transl_table=11
/product="DNA primase"
/protein_id="NP_708876.1"
/db_xref="GeneID:1026671"
/translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN
EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF
APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR
GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
ERLELWTLNQELAKK"
misc_feature 3200153..3201418
/gene="dnaG"
/locus_tag="SF3107"
/note="DNA primase (bacterial type) [Replication,
recombination and repair]; Region: DnaG; COG0358"
/db_xref="CDD:440127"
misc_feature 3201494..3201868
/gene="dnaG"
/locus_tag="SF3107"
/note="DNA primase DnaG DnaB-binding; Region:
DnaG_DnaB_bind; smart00766"
/db_xref="CDD:197866"
gene 3202084..3203925
/gene="rpoD"
/locus_tag="SF3108"
/db_xref="GeneID:1026692"
CDS 3202084..3203925
/gene="rpoD"
/locus_tag="SF3108"
/note="Code: K; COG: COG0568"
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor RpoD"
/protein_id="NP_708877.1"
/db_xref="GeneID:1026692"
/translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR
EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
misc_feature 3202084..3203922
/gene="rpoD"
/locus_tag="SF3108"
/note="RNA polymerase sigma factor RpoD; Validated;
Region: PRK05658"
/db_xref="CDD:235549"
mobile_element 3203996..3205423
/mobile_element_type="insertion sequence:IS4"
gene 3204063..3205409
/locus_tag="SF3109"
/db_xref="GeneID:1026674"
CDS 3204063..3205409
/locus_tag="SF3109"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_708878.1"
/db_xref="GeneID:1026674"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIGQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLSKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature 3204153..3205151
/locus_tag="SF3109"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene complement(3205441..3205947)
/gene="ygjF"
/locus_tag="SF3110"
/pseudo
/db_xref="GeneID:1027193"
misc_feature complement(3205441..3205947)
/gene="ygjF"
/locus_tag="SF3110"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789449 (169 aa). BLAST with
identity of 99% in 168 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 3206072..3206147
/locus_tag="SF4508"
/db_xref="GeneID:3161849"
tRNA 3206072..3206147
/locus_tag="SF4508"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161849"
gene complement(3206201..3206946)
/gene="yqjH"
/locus_tag="SF3111"
/pseudo
/db_xref="GeneID:1026681"
misc_feature complement(3206201..3206946)
/gene="yqjH"
/locus_tag="SF3111"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789450 (255 aa). BLAST with
identity of 99% in 248 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 3207223..3207846
/gene="yqjI"
/locus_tag="SF3112"
/db_xref="GeneID:1023574"
CDS 3207223..3207846
/gene="yqjI"
/locus_tag="SF3112"
/note="Code: K; COG: COG1695"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708879.1"
/db_xref="GeneID:1023574"
/translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG
GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD"
misc_feature 3207400..3207675
/gene="yqjI"
/locus_tag="SF3112"
/note="DNA-binding transcriptional regulator, PadR family
[Transcription]; Region: PadR; COG1695"
/db_xref="CDD:441301"
gene complement(3208000..3209520)
/gene="aer"
/locus_tag="SF3113"
/pseudo
/db_xref="GeneID:1027194"
misc_feature complement(3208000..3209520)
/gene="aer"
/locus_tag="SF3113"
/note="'Similar to Escherichia coli K12 aerotaxis sensor
receptor, flavoprotein gi: 1789453 (507 aa). BLAST with
identity of 98% in 506 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct.'"
/pseudo
gene 3210028..3211317
/gene="ygjG"
/locus_tag="SF3114"
/db_xref="GeneID:1027200"
CDS 3210028..3211317
/gene="ygjG"
/locus_tag="SF3114"
/note="Code: E; COG: COG0160"
/codon_start=1
/transl_table=11
/product="ornithine aminotransferase"
/protein_id="NP_708880.4"
/db_xref="GeneID:1027200"
/translation="MKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLN
TLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKT
LAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGVFHGKSLGALSA
TAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVIL
PPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGV
MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGD
MLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNA
KTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA"
misc_feature 3210028..3211284
/gene="ygjG"
/locus_tag="SF3114"
/note="putrescine aminotransferase; Region:
putres_am_tran; TIGR03372"
/db_xref="CDD:132415"
gene 3211908..3212891
/gene="ebgR"
/locus_tag="SF3115"
/db_xref="GeneID:1027203"
CDS 3211908..3212891
/gene="ebgR"
/locus_tag="SF3115"
/note="Code: K; COG: COG1609"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor EbgR"
/protein_id="NP_708881.2"
/db_xref="GeneID:1027203"
/translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK
LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLAIELTN
CYEHNGLPDIKNVTGILIVGKPTPALRAAASALTDNICFIDFHEPGSGYDAVDIDLAR
ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS
SSGYELAKQMLAREDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR
FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR"
misc_feature 3211908..3212888
/gene="ebgR"
/locus_tag="SF3115"
/note="DNA-binding transcriptional repressor EbgR;
Provisional; Region: PRK10339"
/db_xref="CDD:182389"
gene 3213074..3216160
/gene="ebgA"
/locus_tag="SF3116"
/db_xref="GeneID:1026724"
CDS 3213074..3216160
/gene="ebgA"
/locus_tag="SF3116"
/note="Code: G; COG: COG3250"
/codon_start=1
/transl_table=11
/product="cryptic beta-D-galactosidase subunit alpha"
/protein_id="NP_708882.1"
/db_xref="GeneID:1026724"
/translation="MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPL
SSQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVP
FVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF
DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRT
DFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASF
AFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYV
MLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGL
FVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNES
GYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPR
IICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGD
YGDYPNNYNFCLDGLIYSDQTPGSGLKEYKQVIAPVKIHALTRGELKVENKLWFTTLD
DYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTR
YSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKMSG
KPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSD
GEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMG
INGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTA
LTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLGSN
SWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ"
misc_feature 3213074..3216130
/gene="ebgA"
/locus_tag="SF3116"
/note="cryptic beta-D-galactosidase subunit alpha;
Reviewed; Region: ebgA; PRK10340"
/db_xref="CDD:236673"
gene 3216157..3216606
/gene="ebgC"
/locus_tag="SF3117"
/db_xref="GeneID:1027199"
CDS 3216157..3216606
/gene="ebgC"
/locus_tag="SF3117"
/note="Code: S; COG: COG2731"
/codon_start=1
/transl_table=11
/product="cryptic beta-D-galactosidase subunit beta"
/protein_id="NP_708883.1"
/db_xref="GeneID:1027199"
/translation="MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDS
LTYRVENDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK
GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
misc_feature 3216157..3216603
/gene="ebgC"
/locus_tag="SF3117"
/note="beta-galactosidase subunit beta; Region: ebgC;
PRK10202"
/db_xref="CDD:182302"
gene 3216669..3218102
/gene="ygjI"
/locus_tag="SF3118"
/db_xref="GeneID:1026721"
CDS 3216669..3218102
/gene="ygjI"
/locus_tag="SF3118"
/note="Code: E; COG: COG0531"
/codon_start=1
/transl_table=11
/product="oxidoreductase"
/protein_id="NP_708884.1"
/db_xref="GeneID:1026721"
/translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF
LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS
LLPRVIAYASYAFLGYEYIMTPVATTVISMVLFAFSTWVSTNGAKMLGPITSVTSTLM
LLLTLSYILLAGTALVGGVQPADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY
VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY
FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA
RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD
HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFA
WWKYSKYIKGLTAEERHIEATPASNVD"
misc_feature 3216669..3218045
/gene="ygjI"
/locus_tag="SF3118"
/note="Amino acid permease; Region: AA_permease_2;
cl45918"
/db_xref="CDD:459263"
gene 3218236..3219307
/gene="ygjJ"
/locus_tag="SF3119"
/pseudo
/db_xref="GeneID:1026227"
misc_feature 3218236..3219307
/gene="ygjJ"
/locus_tag="SF3119"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789461 (357 aa). BLAST with
identity of 97% in 357 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 3219324..3221675
/gene="ygjK"
/locus_tag="SF3120"
/db_xref="GeneID:1024277"
CDS 3219324..3221675
/gene="ygjK"
/locus_tag="SF3120"
/codon_start=1
/transl_table=11
/product="alpha-glucosidase"
/protein_id="NP_708885.1"
/db_xref="GeneID:1024277"
/translation="MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDY
DYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQD
GKKVNFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEY
QVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAF
YLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVNYNTVTPSVT
GRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDL
IAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWL
RNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDS
LEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLG
YSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQ
FYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFN
TFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAK
GLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ"
misc_feature 3219324..3221669
/gene="ygjK"
/locus_tag="SF3120"
/note="alpha-glucosidase; Provisional; Region: PRK10137"
/db_xref="CDD:236653"
gene 3221901..3223919
/gene="ygjL"
/locus_tag="SF3121"
/db_xref="GeneID:1026687"
CDS 3221901..3223919
/gene="ygjL"
/locus_tag="SF3121"
/codon_start=1
/transl_table=11
/product="NADPH dehydrogenase"
/protein_id="NP_708886.1"
/db_xref="GeneID:1026687"
/translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY
AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
LHTGRYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFARCAQLAREAGYDGVE
VMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRTVRERVGNDFIIIYRLSM
LDLVEGGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL
KGHVSLPLVTTNRINDPQVADDILSRGDADIVSMARPFLADAELLSKAQSGRADEINT
CIGCNQGCLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN
AAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT
ADQLQAFDETILASGIVPRVPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
DTAMYLSQPGESTSQNIARFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC
AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI"
misc_feature 3221916..3222974
/gene="ygjL"
/locus_tag="SF3121"
/note="2,4-dienoyl-CoA reductase (DCR) FMN-binding domain.
DCR in E. coli is an iron-sulfur flavoenzyme which
contains FMN, FAD, and a 4Fe-4S cluster. It is also a
monomer, unlike that of its eukaryotic counterparts which
form homotetramers and lack the...; Region: DCR_FMN;
cd02930"
/db_xref="CDD:239240"
misc_feature order(3221973..3221975,3221979..3221981,3222075..3222077,
3222201..3222203,3222393..3222395,3222399..3222401,
3222426..3222428,3222543..3222545,3222657..3222659,
3222666..3222668,3222831..3222836,3222903..3222905,
3222912..3222914,3222924..3222926,3222960..3222962)
/gene="ygjL"
/locus_tag="SF3121"
/note="active site"
/db_xref="CDD:239240"
misc_feature order(3221973..3221975,3221979..3221981,3222075..3222077,
3222201..3222203,3222543..3222545,3222831..3222836)
/gene="ygjL"
/locus_tag="SF3121"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:239240"
misc_feature order(3222393..3222395,3222399..3222401,3222426..3222428,
3222657..3222659,3222666..3222668)
/gene="ygjL"
/locus_tag="SF3121"
/note="2,4-decadienoyl-CoA binding site; other site"
/db_xref="CDD:239240"
misc_feature 3222399..3222401
/gene="ygjL"
/locus_tag="SF3121"
/note="catalytic residue [active]"
/db_xref="CDD:239240"
misc_feature order(3222903..3222905,3222912..3222914,3222924..3222926,
3222960..3222962)
/gene="ygjL"
/locus_tag="SF3121"
/note="4Fe-4S cluster binding site [ion binding]; other
site"
/db_xref="CDD:239240"
misc_feature <3222984..>3223436
/gene="ygjL"
/locus_tag="SF3121"
/note="NADPH-dependent glutamate synthase beta chain or
related oxidoreductase [Amino acid transport and
metabolism, General function prediction only]; Region:
GltD; COG0493"
/db_xref="CDD:440259"
misc_feature 3223095..>3223856
/gene="ygjL"
/locus_tag="SF3121"
/note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur
reductase, or a related oxidoreductase [Lipid transport
and metabolism]; Region: FadH2; COG0446"
/db_xref="CDD:440215"
gene complement(3223964..3224380)
/gene="ygjM"
/locus_tag="SF3122"
/db_xref="GeneID:1026701"
CDS complement(3223964..3224380)
/gene="ygjM"
/locus_tag="SF3122"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708887.1"
/db_xref="GeneID:1026701"
/translation="MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLND
PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG
SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID"
misc_feature complement(3223967..3224347)
/gene="ygjM"
/locus_tag="SF3122"
/note="Antitoxin component HigA of the HigAB
toxin-antitoxin module, contains an N-terminal HTH domain
[Defense mechanisms]; Region: HigA; COG5499"
/db_xref="CDD:444250"
gene complement(3224377..3224691)
/gene="ygjN"
/locus_tag="SF3123"
/db_xref="GeneID:1026710"
CDS complement(3224377..3224691)
/gene="ygjN"
/locus_tag="SF3123"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708888.2"
/db_xref="GeneID:1026710"
/translation="MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAV
FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG
KK"
misc_feature complement(3224416..3224688)
/gene="ygjN"
/locus_tag="SF3123"
/note="mRNA-degrading endonuclease (mRNA interferase)
HigB, toxic component of the HigAB toxin-antitoxin module
[Translation, ribosomal structure and biogenesis, Defense
mechanisms]; Region: HigB; COG4680"
/db_xref="CDD:443716"
gene complement(3224976..3226112)
/gene="ygjO"
/locus_tag="SF3124"
/db_xref="GeneID:1026843"
CDS complement(3224976..3226112)
/gene="ygjO"
/locus_tag="SF3124"
/note="Code: J; COG: COG2813"
/codon_start=1
/transl_table=11
/product="SAM-dependent 23S ribosomal RNA mG1835
methyltransferase"
/protein_id="NP_708889.1"
/db_xref="GeneID:1026843"
/translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
LGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG
PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM
PEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARRCLKING
ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR"
misc_feature complement(3224979..3226112)
/gene="ygjO"
/locus_tag="SF3124"
/note="23S rRNA (guanine(1835)-N(2))-methyltransferase
RlmG; Region: PRK15001"
/db_xref="CDD:184963"
gene 3226161..3226700
/gene="ygjP"
/locus_tag="SF3125"
/db_xref="GeneID:1027201"
CDS 3226161..3226700
/gene="ygjP"
/locus_tag="SF3125"
/note="Code: R; COG: COG1451"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708890.1"
/db_xref="GeneID:1027201"
/translation="MSIPFFSFSWAVMSNLTYLQGYPEQLLSQVRTLINEQRLGDVLA
KRYPGTHDYATDKALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRV
QGSKLKAKAEIRVATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQ
LEFDTRLWLTQLSLGQDKI"
misc_feature <3226524..3226676
/gene="ygjP"
/locus_tag="SF3125"
/note="Peptidase M48 YhfN-like, a novel minigluzincin;
Region: M48_yhfN_like; cd07344"
/db_xref="CDD:320703"
misc_feature order(3226557..3226562,3226569..3226571,3226587..3226589)
/gene="ygjP"
/locus_tag="SF3125"
/note="active site"
/db_xref="CDD:320703"
misc_feature order(3226557..3226559,3226569..3226571,3226587..3226589)
/gene="ygjP"
/locus_tag="SF3125"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:320703"
gene 3226777..3227469
/gene="ygjQ"
/locus_tag="SF3126"
/db_xref="GeneID:1027197"
CDS 3226777..3227469
/gene="ygjQ"
/locus_tag="SF3126"
/note="Code: S; COG: COG2949"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708891.1"
/db_xref="GeneID:1027197"
/translation="MLRAFARLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNAS
KQLTWGDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKN
YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRT
IWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMI
GPFSEHGCPAKE"
misc_feature 3226822..3227430
/gene="ygjQ"
/locus_tag="SF3126"
/note="Uncharacterized periplasmic protein SanA, affects
membrane permeability for vancomycin [Cell
wall/membrane/envelope biogenesis]; Region: SanA; COG2949"
/db_xref="CDD:442192"
gene 3227530..3228546
/gene="ygjR"
/locus_tag="SF3127"
/db_xref="GeneID:1026708"
CDS 3227530..3228546
/gene="ygjR"
/locus_tag="SF3127"
/note="Code: R; COG: COG0673"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708892.1"
/db_xref="GeneID:1026708"
/translation="MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQ
AQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKIHVICEKPL
ASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKAGKLRKVFFNYCQYSS
RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAH
GVVVMDYGDFSVTLQHSKVSDSVLGSEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDL
TQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
YLPK"
misc_feature 3227548..3228297
/gene="ygjR"
/locus_tag="SF3127"
/note="Predicted dehydrogenase [General function
prediction only]; Region: MviM; COG0673"
/db_xref="CDD:440437"
gene 3228817..3229779
/gene="ygjT"
/locus_tag="SF3128"
/db_xref="GeneID:1027180"
CDS 3228817..3229779
/gene="ygjT"
/locus_tag="SF3128"
/note="Code: P; COG: COG0861"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708893.1"
/db_xref="GeneID:1027180"
/translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRG"
misc_feature 3228832..3229752
/gene="ygjT"
/locus_tag="SF3128"
/note="integral membrane protein, TerC family; Region:
R_switched_Alx; TIGR03718"
/db_xref="CDD:274743"
gene 3230377..3231621
/gene="ygjU"
/locus_tag="SF3129"
/db_xref="GeneID:1026702"
CDS 3230377..3231621
/gene="ygjU"
/locus_tag="SF3129"
/note="Code: E; COG: COG3633"
/codon_start=1
/transl_table=11
/product="serine/threonine transporter SstT"
/protein_id="NP_708894.1"
/db_xref="GeneID:1026702"
/translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPFGIFGLVSSTLATTGFSTLWGYAQL
LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
VLFTAAACQAEDDRLANSALRN"
misc_feature 3230383..3231588
/gene="ygjU"
/locus_tag="SF3129"
/note="serine/threonine transporter SstT; Provisional;
Region: PRK13628"
/db_xref="CDD:184190"
gene complement(3231626..3232177)
/gene="ygjV"
/locus_tag="SF3130"
/db_xref="GeneID:1026722"
CDS complement(3231626..3232177)
/gene="ygjV"
/locus_tag="SF3130"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708895.1"
/db_xref="GeneID:1026722"
/translation="MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVH
FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
TIVSTWALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
RMQKRGIDPFKVEKTPPAIDERG"
misc_feature complement(3231701..3232165)
/gene="ygjV"
/locus_tag="SF3130"
/note="Bacterial inner membrane protein; Region: Imp-YgjV;
pfam10688"
/db_xref="CDD:431436"
gene complement(3232260..3233747)
/gene="uxaA"
/locus_tag="SF3131"
/db_xref="GeneID:1027198"
CDS complement(3232260..3233747)
/gene="uxaA"
/locus_tag="SF3131"
/note="Code: G; COG: COG2721"
/codon_start=1
/transl_table=11
/product="altronate hydrolase"
/protein_id="NP_708896.1"
/db_xref="GeneID:1027198"
/translation="MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKF
ALTDIAKGANVIKYGLPIGYALADIAAGEHVHAHNTRTNLSDLDQYRYQLDFQDLPAQ
AADPEVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLF
SHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPER
VHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITAN
PMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIA
HDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAP
GNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQL
IHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL"
misc_feature complement(3232263..3233747)
/gene="uxaA"
/locus_tag="SF3131"
/note="Altronate dehydratase [Carbohydrate transport and
metabolism]; Region: UxaA; COG2721"
/db_xref="CDD:442034"
gene complement(3233762..3235174)
/gene="uxaC"
/locus_tag="SF3132"
/db_xref="GeneID:1027178"
CDS complement(3233762..3235174)
/gene="uxaC"
/locus_tag="SF3132"
/note="Code: G; COG: COG1904"
/codon_start=1
/transl_table=11
/product="glucuronate isomerase"
/protein_id="NP_708897.2"
/db_xref="GeneID:1027178"
/translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK
TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
EMVKNICFNNARDYFAIELN"
misc_feature complement(3233780..3235159)
/gene="uxaC"
/locus_tag="SF3132"
/note="Glucuronate isomerase [Carbohydrate transport and
metabolism]; Region: UxaC; COG1904"
/db_xref="CDD:441508"
gene 3235659..3236957
/gene="exuT"
/locus_tag="SF3133"
/db_xref="GeneID:1027182"
CDS 3235659..3236957
/gene="exuT"
/locus_tag="SF3133"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="hexuronates transporter"
/protein_id="NP_708898.2"
/db_xref="GeneID:1027182"
/translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST
QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLA
VARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM
SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA
DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSP
LFAVLAVFDLLGALVIWTVLQNKPAIEVAQETHNDPAPQH"
misc_feature 3235707..3236894
/gene="exuT"
/locus_tag="SF3133"
/note="D-galactonate transporter; Region: 2A0114;
TIGR00893"
/db_xref="CDD:273326"
gene complement(3237045..3237677)
/locus_tag="SF3134"
/db_xref="GeneID:1027175"
CDS complement(3237045..3237677)
/locus_tag="SF3134"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708899.2"
/db_xref="GeneID:1027175"
/translation="MKNLPIGGVWKGKVKLHSNSPAQDYFANITLNTLDPNHIDVFFP
EFAHATPRVQLDLHPTGSVNGSNYAQDLTMLDMCLYDGFNGNAISYEIMLKDEGRPAA
GRRDGYFSIYRQGGTTTDEGERIDYRVKMYNPETGGQIDVRNNENMVWNSINLKRVRP
VVLPGIRYAVMCVPTPLTLAVDKFSVMDKQAGYYMGKLSVIFTPSLPTIN"
misc_feature complement(3237060..>3237677)
/locus_tag="SF3134"
/note="CblD like pilus biogenesis initiator; Region: CblD;
cl06460"
/db_xref="CDD:471445"
mobile_element 3237769..3238536
/mobile_element_type="insertion sequence:IS1"
gene 3237824..3238099
/gene="insA"
/locus_tag="SF3135"
/db_xref="GeneID:1025937"
CDS 3237824..3238099
/gene="insA"
/locus_tag="SF3135"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708900.1"
/db_xref="GeneID:1025937"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHLRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 3237845..>3238096
/gene="insA"
/locus_tag="SF3135"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3238126..3238521
/gene="insB"
/locus_tag="SF3136"
/db_xref="GeneID:1026739"
CDS 3238126..3238521
/gene="insB"
/locus_tag="SF3136"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708901.1"
/db_xref="GeneID:1026739"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 3238129..3238518
/gene="insB"
/locus_tag="SF3136"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 3238629..3239405
/gene="exuR"
/locus_tag="SF3137"
/db_xref="GeneID:1026725"
CDS 3238629..3239405
/gene="exuR"
/locus_tag="SF3137"
/note="Code: K; COG: COG2186"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor ExuR"
/protein_id="NP_708902.1"
/db_xref="GeneID:1026725"
/translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK"
misc_feature 3238629..3239387
/gene="exuR"
/locus_tag="SF3137"
/note="transcriptional regulator ExuR; Region: PRK11523"
/db_xref="CDD:183176"
gene 3239750..3240412
/gene="yqjA"
/locus_tag="SF3138"
/db_xref="GeneID:1025266"
CDS 3239750..3240412
/gene="yqjA"
/locus_tag="SF3138"
/note="Code: S; COG: COG0586"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708903.1"
/db_xref="GeneID:1025266"
/translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
RG"
misc_feature 3239819..>3240280
/gene="yqjA"
/locus_tag="SF3138"
/note="Membrane integrity protein DedA, putative
transporter, DedA/Tvp38 family [Cell
wall/membrane/envelope biogenesis]; Region: DedA; COG0586"
/db_xref="CDD:440351"
gene 3240431..3240799
/gene="yqjB"
/locus_tag="SF3139"
/db_xref="GeneID:1026716"
CDS 3240431..3240799
/gene="yqjB"
/locus_tag="SF3139"
/codon_start=1
/transl_table=11
/product="EnvZ/OmpR regulon moderator"
/protein_id="NP_708904.2"
/db_xref="GeneID:1026716"
/translation="MSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTM
PDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQD
NNSQAMQWLTRLRDNSHRFG"
misc_feature 3240431..3240796
/gene="yqjB"
/locus_tag="SF3139"
/note="EnvZ/OmpR regulon moderator MzrA; Region: PRK10629"
/db_xref="CDD:236728"
gene 3240931..3241300
/gene="yqjC"
/locus_tag="SF3140"
/pseudo
/db_xref="GeneID:1027191"
misc_feature 3240931..3241300
/gene="yqjC"
/locus_tag="SF3140"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 2367195 (128 aa). BLAST with
identity of 99% in 123 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene 3241338..3241643
/gene="yqjD"
/locus_tag="SF3141"
/db_xref="GeneID:1025270"
CDS 3241338..3241643
/gene="yqjD"
/locus_tag="SF3141"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708905.2"
/db_xref="GeneID:1025270"
/translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
misc_feature 3241341..3241640
/gene="yqjD"
/locus_tag="SF3141"
/note="Membrane-anchored ribosome-binding protein ElaB,
inhibits growth in stationary phase, YqjD/DUF883 family
[Translation, ribosomal structure and biogenesis]; Region:
ElaB; COG4575"
/db_xref="CDD:443632"
gene 3241646..3242050
/gene="yqjE"
/locus_tag="SF3142"
/db_xref="GeneID:1027183"
CDS 3241646..3242050
/gene="yqjE"
/locus_tag="SF3142"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708906.1"
/db_xref="GeneID:1027183"
/translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
misc_feature 3241646..3242035
/gene="yqjE"
/locus_tag="SF3142"
/note="Uncharacterized membrane protein YqjE [Function
unknown]; Region: YqjE; COG5393"
/db_xref="CDD:444153"
gene 3242040..3242339
/locus_tag="SF3143"
/db_xref="GeneID:1026845"
CDS 3242040..3242339
/locus_tag="SF3143"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708907.1"
/db_xref="GeneID:1026845"
/translation="MSSKVERERRKAQLLSQIQQQRLDLSASSREWLEATGAYDRRWN
MLLSLRSWALVGSRVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
misc_feature 3242079..3242294
/locus_tag="SF3143"
/note="YqjK-like protein; Region: YqjK; pfam13997"
/db_xref="CDD:464063"
gene 3242435..3242821
/locus_tag="SF3144"
/db_xref="GeneID:1027190"
CDS 3242435..3242821
/locus_tag="SF3144"
/note="Code: S; COG: COG2259"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708908.1"
/db_xref="GeneID:1027190"
/translation="MILSIDSNDANSAPLHKKTISSLSGAVESMMKKLEDVGVLVAHI
LMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLLTAFLFHSNFAEGVNSLMFMKNLT
ISGGFLLLAITGPGAYSIGRLLNKKW"
misc_feature 3242519..3242818
/locus_tag="SF3144"
/note="Uncharacterized membrane protein YphA, DoxX/SURF4
family [Function unknown]; Region: DoxX; COG2259"
/db_xref="CDD:441860"
gene 3242891..3243877
/gene="yqjG"
/locus_tag="SF3145"
/db_xref="GeneID:1027184"
CDS 3242891..3243877
/gene="yqjG"
/locus_tag="SF3145"
/note="Code: O; COG: COG0435"
/codon_start=1
/transl_table=11
/product="transferase"
/protein_id="NP_708909.2"
/db_xref="GeneID:1027184"
/translation="MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTG
TGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSF
PGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF
DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLA
RLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRD
IYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG"
misc_feature 3242891..3243874
/gene="yqjG"
/locus_tag="SF3145"
/note="Glutathionyl-hydroquinone reductase [Energy
production and conversion]; Region: ECM4; COG0435"
/db_xref="CDD:440204"
gene 3244170..3244538
/gene="yhaH"
/locus_tag="SF3146"
/db_xref="GeneID:1026709"
CDS 3244170..3244538
/gene="yhaH"
/locus_tag="SF3146"
/note="Code: S; COG: COG3152"
/codon_start=1
/transl_table=11
/product="cytochrome"
/protein_id="NP_708910.2"
/db_xref="GeneID:1026709"
/translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
GWQRAGGEGILTIIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
CQAGTPGENRFGPDPKLEQE"
misc_feature 3244173..3244523
/gene="yhaH"
/locus_tag="SF3146"
/note="Uncharacterized membrane protein YhaH, DUF805
family [Function unknown]; Region: yhaH; COG3152"
/db_xref="CDD:442386"
gene complement(3244745..3245641)
/gene="yhaJ"
/locus_tag="SF3147"
/db_xref="GeneID:1026704"
CDS complement(3244745..3245641)
/gene="yhaJ"
/locus_tag="SF3147"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="NP_708911.1"
/db_xref="GeneID:1026704"
/translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIV
TEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSS
EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD
KQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWR
RDSMGEAKSWCLREIPKLFAGK"
misc_feature complement(3245438..3245617)
/gene="yhaJ"
/locus_tag="SF3147"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:459683"
misc_feature complement(3244769..3245347)
/gene="yhaJ"
/locus_tag="SF3147"
/note="Type 2 periplasmic binding fold superfamily;
Region: Periplasmic_Binding_Protein_Type_2; cl21456"
/db_xref="CDD:473866"
misc_feature complement(order(3244931..3244936,3244940..3244945,
3244961..3244978,3245249..3245269,3245270..3245272,
3245282..3245284,3245291..3245296,3245300..3245305))
/gene="yhaJ"
/locus_tag="SF3147"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176102"
gene 3245746..3246447
/gene="yhaK"
/locus_tag="SF3148"
/db_xref="GeneID:1026543"
CDS 3245746..3246447
/gene="yhaK"
/locus_tag="SF3148"
/note="Code: R; COG: COG1741"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708912.1"
/db_xref="GeneID:1026543"
/translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS
EHNLSKDKPLTRMQLWLDTCPQRENPLIQKLALNMDKQQLIASPEGAMGSLQLRQQVW
LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
VADSPLRALLIDLPV"
misc_feature 3245794..3246150
/gene="yhaK"
/locus_tag="SF3148"
/note="RmlC-like cupin superfamily; Region:
cupin_RmlC-like; cl40423"
/db_xref="CDD:477354"
misc_feature 3246220..3246441
/gene="yhaK"
/locus_tag="SF3148"
/note="Escherichia coli YhhW and YhaK and related
proteins, pirin-like bicupin, C-terminal cupin domain;
Region: cupin_Yhhw_C; cd20311"
/db_xref="CDD:380445"
misc_feature order(3246226..3246228,3246289..3246291,3246295..3246303,
3246325..3246327,3246352..3246357,3246364..3246366,
3246370..3246372,3246418..3246420,3246424..3246426,
3246430..3246432,3246436..3246441)
/gene="yhaK"
/locus_tag="SF3148"
/note="intramolecular domain interface [polypeptide
binding]; other site"
/db_xref="CDD:380445"
gene 3246470..3246634
/gene="yhaL"
/locus_tag="SF3149"
/db_xref="GeneID:1027195"
CDS 3246470..3246634
/gene="yhaL"
/locus_tag="SF3149"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708913.2"
/db_xref="GeneID:1027195"
/translation="MSKKSTKKRQPAKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
TRLAEDEATA"
gene complement(3246846..3248156)
/gene="yhaM"
/locus_tag="SF3150"
/db_xref="GeneID:1027189"
CDS complement(3246846..3248156)
/gene="yhaM"
/locus_tag="SF3150"
/note="Code: S; COG: COG3681"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708914.3"
/db_xref="GeneID:1027189"
/translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL
EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ
AIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNG
VVFTHQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG
LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ
GITAIMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA
GMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
misc_feature complement(3246849..3248138)
/gene="yhaM"
/locus_tag="SF3150"
/note="L-cysteine desulfidase YhaM [Amino acid transport
and metabolism]; Region: CdsB; COG3681"
/db_xref="CDD:442897"
gene complement(3248184..3249515)
/gene="yhaO"
/locus_tag="SF3151"
/db_xref="GeneID:1027176"
CDS complement(3248184..3249515)
/gene="yhaO"
/locus_tag="SF3151"
/note="Code: E; COG: COG0814"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_708915.1"
/db_xref="GeneID:1027176"
/translation="MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMS
IGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSV
ISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
VLICILVAISSRGEKLLFKISTDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLV
KNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFF
YAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFG
VYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSSIVLNAPVLSFTS
ICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSLFLAFS"
misc_feature complement(3248217..3249419)
/gene="yhaO"
/locus_tag="SF3151"
/note="Solute carrier families 5 and 6-like; solute
binding domain; Region: SLC5-6-like_sbd; cl00456"
/db_xref="CDD:444915"
gene complement(3249790..3251154)
/locus_tag="SF3152"
/db_xref="GeneID:1023528"
CDS complement(3249790..3251154)
/locus_tag="SF3152"
/note="Code: E; COG: COG1760"
/codon_start=1
/transl_table=11
/product="L-serine dehydratase TdcG"
/protein_id="NP_708916.2"
/db_xref="GeneID:1023528"
/translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH
IVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA
HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLS
HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD
GIERGMNTEGVLPGPLNVPCRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA
AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG
AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC
IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
VVCG"
misc_feature complement(3249793..3251154)
/locus_tag="SF3152"
/note="L-serine ammonia-lyase; Region: PRK15040"
/db_xref="CDD:185000"
gene complement(3251226..3251615)
/gene="yhaR"
/locus_tag="SF3153"
/db_xref="GeneID:1027187"
CDS complement(3251226..3251615)
/gene="yhaR"
/locus_tag="SF3153"
/note="Code: J; COG: COG0251"
/codon_start=1
/transl_table=11
/product="endoribonuclease L-PSP"
/protein_id="NP_708917.2"
/db_xref="GeneID:1027187"
/translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA
DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY
PTRSCVQVARLPKDVKLEIEAIAVRSA"
misc_feature complement(3251229..3251615)
/gene="yhaR"
/locus_tag="SF3153"
/note="enamine/imine deaminase; Region: PRK11401"
/db_xref="CDD:105214"
misc_feature complement(order(3251244..3251246,3251250..3251252,
3251256..3251258,3251286..3251309,3251343..3251345,
3251352..3251354,3251385..3251387,3251391..3251393,
3251397..3251402,3251406..3251408,3251523..3251528,
3251532..3251534,3251538..3251540,3251547..3251549,
3251553..3251555,3251562..3251567))
/gene="yhaR"
/locus_tag="SF3153"
/note="homotrimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:100004"
misc_feature complement(order(3251256..3251258,3251301..3251303,
3251352..3251354,3251364..3251366,3251565..3251567))
/gene="yhaR"
/locus_tag="SF3153"
/note="putative active site [active]"
/db_xref="CDD:100004"
gene complement(3251629..3253923)
/gene="tdcE"
/locus_tag="SF3154"
/db_xref="GeneID:1027169"
CDS complement(3251629..3253923)
/gene="tdcE"
/locus_tag="SF3154"
/note="Code: C; COG: COG1882"
/codon_start=1
/transl_table=11
/product="formate acetyltransferase 3"
/protein_id="NP_708918.1"
/db_xref="GeneID:1027169"
/translation="MKVDIDTSDKLYADAWLGFKGTDWKSEINVRDFIQHNYTPYEGD
ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV
GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD
MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL
EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG
GAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA
AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK
YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG
EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT
PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGY
AVRFNALTREQQQDVISRTFTQAL"
misc_feature complement(3251644..3253881)
/gene="tdcE"
/locus_tag="SF3154"
/note="Pyruvate formate lyase 1; Region: PFL1; cd01678"
/db_xref="CDD:153087"
misc_feature complement(order(3253426..3253431,3253438..3253440,
3253453..3253455,3253459..3253464,3253471..3253476,
3253558..3253563))
/gene="tdcE"
/locus_tag="SF3154"
/note="coenzyme A binding site [chemical binding]; other
site"
/db_xref="CDD:153087"
misc_feature complement(order(3252091..3252093,3252097..3252099,
3252604..3252606,3252613..3252615,3252655..3252657,
3252910..3252912,3252928..3252930,3253090..3253095,
3253381..3253383))
/gene="tdcE"
/locus_tag="SF3154"
/note="active site"
/db_xref="CDD:153087"
misc_feature complement(order(3251707..3251709,3252652..3252657))
/gene="tdcE"
/locus_tag="SF3154"
/note="catalytic residues [active]"
/db_xref="CDD:153087"
misc_feature complement(3251704..3251718)
/gene="tdcE"
/locus_tag="SF3154"
/note="glycine loop [active]"
/db_xref="CDD:153087"
gene complement(3253957..3255165)
/gene="tdcD"
/locus_tag="SF3155"
/db_xref="GeneID:1027186"
CDS complement(3253957..3255165)
/gene="tdcD"
/locus_tag="SF3155"
/note="Code: C; COG: COG0282"
/codon_start=1
/transl_table=11
/product="kinase"
/protein_id="NP_708919.4"
/db_xref="GeneID:1027186"
/translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD
EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS
SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI
RRLVMEHLAVLGVEIDTEMNNRSNSFGERIVSSENAHVICVVIPTNEEKMIALDAIHL
GKVNAPAEFA"
misc_feature complement(3253978..3255165)
/gene="tdcD"
/locus_tag="SF3155"
/note="propionate kinase; Region: PRK12379"
/db_xref="CDD:183484"
gene complement(3255191..3256522)
/gene="tdcC"
/locus_tag="SF3156"
/db_xref="GeneID:1027153"
CDS complement(3255191..3256522)
/gene="tdcC"
/locus_tag="SF3156"
/note="Code: E; COG: COG0814"
/codon_start=1
/transl_table=11
/product="threonine/serine transporter TdcC"
/protein_id="NP_708920.1"
/db_xref="GeneID:1027153"
/translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
YLGTLEGLNGLILKFGYKGDKTKVSLGKLNTLSMIFIMGSTWVVAYANPNILDLIEAM
GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
misc_feature complement(3255194..3256522)
/gene="tdcC"
/locus_tag="SF3156"
/note="threonine/serine transporter TdcC; Provisional;
Region: PRK13629"
/db_xref="CDD:184191"
gene complement(3256544..3257533)
/gene="tdcB"
/locus_tag="SF3157"
/db_xref="GeneID:1027202"
CDS complement(3256544..3257533)
/gene="tdcB"
/locus_tag="SF3157"
/note="Code: E; COG: COG1171"
/codon_start=1
/transl_table=11
/product="threonine dehydratase"
/protein_id="NP_708921.1"
/db_xref="GeneID:1027202"
/translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
misc_feature complement(3256553..3257533)
/gene="tdcB"
/locus_tag="SF3157"
/note="bifunctional threonine ammonia-lyase/L-serine
ammonia-lyase TdcB; Region: PRK08638"
/db_xref="CDD:236317"
misc_feature complement(order(3256586..3256597,3256694..3256702,
3256712..3256714,3256721..3256726,3256733..3256735,
3256940..3256945,3257381..3257386,3257477..3257482,
3257489..3257491,3257498..3257503))
/gene="tdcB"
/locus_tag="SF3157"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:107205"
misc_feature complement(order(3256601..3256603,3256970..3256984,
3257279..3257281,3257360..3257362))
/gene="tdcB"
/locus_tag="SF3157"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:107205"
misc_feature complement(3257360..3257362)
/gene="tdcB"
/locus_tag="SF3157"
/note="catalytic residue [active]"
/db_xref="CDD:107205"
gene complement(3257632..3258570)
/gene="tdcA"
/locus_tag="SF3158"
/db_xref="GeneID:1027154"
CDS complement(3257632..3258570)
/gene="tdcA"
/locus_tag="SF3158"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator TdcA"
/protein_id="NP_708922.1"
/db_xref="GeneID:1027154"
/translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKL
QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
WSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG"
misc_feature complement(3257635..3258570)
/gene="tdcA"
/locus_tag="SF3158"
/note="transcriptional regulator TdcA; Region: PRK10341"
/db_xref="CDD:182391"
gene 3258760..3259104
/gene="tdcR"
/locus_tag="SF3159"
/db_xref="GeneID:1027181"
CDS 3258760..3259104
/gene="tdcR"
/locus_tag="SF3159"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional activator TdcR"
/protein_id="NP_708923.1"
/db_xref="GeneID:1027181"
/translation="MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMS
KFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
DRTSFCECNRFP"
misc_feature 3258760..3259101
/gene="tdcR"
/locus_tag="SF3159"
/note="DNA-binding transcriptional activator TdcR;
Provisional; Region: PRK11424"
/db_xref="CDD:236909"
gene 3259922..3261099
/gene="yhaC"
/locus_tag="SF3160"
/pseudo
/db_xref="GeneID:1027185"
misc_feature 3259922..3261099
/gene="yhaC"
/locus_tag="SF3160"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789509 (396 aa). BLAST with
identity of 96% in 393 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene complement(3261709..3262085)
/gene="rnpB"
/locus_tag="SF4561"
/db_xref="GeneID:1027161"
ncRNA complement(3261709..3262085)
/ncRNA_class="RNase_P_RNA"
/gene="rnpB"
/locus_tag="SF4561"
/product="RNase P, RNA component"
/note="'M1 RNA; processes tRNA, 4.5S RNA'"
/db_xref="GeneID:1027161"
gene complement(3262118..3263344)
/gene="yhaD"
/locus_tag="SF3161"
/db_xref="GeneID:1025646"
CDS complement(3262118..3263344)
/gene="yhaD"
/locus_tag="SF3161"
/note="Code: G; COG: COG1929"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708924.3"
/db_xref="GeneID:1025646"
/translation="MAYCNPGLESRPNKRNALRRHVVTGIGMKIVIAPDSYKESLSAS
EVAQAIEKGFREIFPDAQYVSIPVADGGEGTVEAMIAATQGSERHAWVTGPLGEKVNA
SWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGI
GGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVA
CDVTNPLVGDNGASRIFGPQKGASEAMIVELDNNLSHYADVIKKALHVDVKDVPGAGA
AGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEGRIDSQSIHGKVPIG
VANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYDNICRA
SRNIAATLAIGMRNTG"
misc_feature complement(3262121..3263263)
/gene="yhaD"
/locus_tag="SF3161"
/note="glycerate kinase I; Provisional; Region: PRK10342"
/db_xref="CDD:182392"
gene complement(3263360..3264259)
/gene="yhaE"
/locus_tag="SF3162"
/db_xref="GeneID:1027188"
CDS complement(3263360..3264259)
/gene="yhaE"
/locus_tag="SF3162"
/note="Code: I; COG: COG2084"
/codon_start=1
/transl_table=11
/product="2-hydroxy-3-oxopropionate reductase"
/protein_id="NP_708925.3"
/db_xref="GeneID:1027188"
/translation="MIDMTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADV
IAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIA
PLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAG
SVVHTGAIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGST
VLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADG
LGTADHSALVCYYEKLAKVEVTR"
misc_feature complement(3263363..3264250)
/gene="yhaE"
/locus_tag="SF3162"
/note="tartronate semialdehyde reductase; Provisional;
Region: garR; PRK11559"
/db_xref="CDD:183197"
gene complement(3264280..3265050)
/gene="yhaF"
/locus_tag="SF3163"
/pseudo
/db_xref="GeneID:1027162"
misc_feature complement(3264280..3265050)
/gene="yhaF"
/locus_tag="SF3163"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789514 (257 aa). BLAST with
identity of 99% in 256 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(3265066..3266400)
/gene="yhaU"
/locus_tag="SF3164"
/db_xref="GeneID:1024440"
CDS complement(3265066..3266400)
/gene="yhaU"
/locus_tag="SF3164"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_708926.1"
/db_xref="GeneID:1024440"
/translation="MILDTVDEKRKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEV
AKELQLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGF
VDMFPLAWAGISMFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFS
LALFSPLLGWLTFAWGWEHVFTVMGVICFVLTALWIKLIHNPTDHPRMSEEELKFISE
NGAVVDMDHKKPGSAAASGPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIY
LVQEKGMSILKVGLVASIPALCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLL
ASTIILCNYTNNTTLVVMLMALAFFGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGN
VASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCYLFVVGDIKRMELQK"
misc_feature complement(3265099..3266328)
/gene="yhaU"
/locus_tag="SF3164"
/note="D-galactonate transporter; Region: 2A0114;
TIGR00893"
/db_xref="CDD:273326"
gene 3266775..3268346
/gene="yhaG"
/locus_tag="SF3165"
/db_xref="GeneID:1026846"
CDS 3266775..3268346
/gene="yhaG"
/locus_tag="SF3165"
/note="Code: G; COG: COG2721"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="NP_708927.2"
/db_xref="GeneID:1026846"
/translation="MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLE
LIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTL
PLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDL
LPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKL
QPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRET
CPASELVVGMHCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTP
RAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGK
SAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVP
VIKMAPRTELANRWFDLMDINAGTIATGEETIEEEGWKLFHFILDVASGKKKTFSDQW
GLHNQLAVFNPAPVT"
misc_feature 3266817..3268343
/gene="yhaG"
/locus_tag="SF3165"
/note="galactarate dehydratase; Region: galactar-dH20;
TIGR03248"
/db_xref="CDD:274491"
gene complement(3268398..3269222)
/gene="agaR"
/locus_tag="SF3166"
/db_xref="GeneID:1027165"
CDS complement(3268398..3269222)
/gene="agaR"
/locus_tag="SF3166"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator AgaR"
/protein_id="NP_708928.1"
/db_xref="GeneID:1027165"
/translation="MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVS
TVTIRNDLAFLEKQGIAVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVE
LIQPGHRVILDSGTTTFEIARLMRKYTDVIAMTNGMNVANALLEAEGVELLMTGGHLR
RQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGVSTHNEDEARLSRRMCEVAERII
VVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIPADSLEGLRKAGVEVILVGDHASSL"
misc_feature complement(3268416..3269222)
/gene="agaR"
/locus_tag="SF3166"
/note="DeoR family transcriptional regulator; Region:
PRK09802"
/db_xref="CDD:182086"
gene 3269471..3270751
/gene="agaZ"
/locus_tag="SF3167"
/db_xref="GeneID:1027164"
CDS 3269471..3270751
/gene="agaZ"
/locus_tag="SF3167"
/codon_start=1
/transl_table=11
/product="tagatose 6-phosphate aldolase subunit KbaZ"
/protein_id="NP_708929.1"
/db_xref="GeneID:1027164"
/translation="MKHLTEMVRQHKAGKTNAIYAVCSAHPLVLEAAIRYASANQTPL
LIEATSNQVDQFGGYTGMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPA
AQAMANADDLIKSYVAAGFKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCR
EHFGEADLEYVIGTEVPVPGGAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWP
RIIALVVQPGVEFDHTNVIDYQPAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLV
IDHFAILKVGPALTFALREALFSLAAIEEELVPAKACSGLRQVLENVMLDRPEYWQSH
YHGDGNARRLARGYSYSDRVRYYWPDSQIDDAFAHLVRNLADSPIPLPLISQYLPLQY
VKVRSGELQPTPRELIINHIQDILAQYHTACEGQ"
misc_feature 3269471..3270748
/gene="agaZ"
/locus_tag="SF3167"
/note="tagatose 6-phosphate aldolase subunit KbaZ;
Provisional; Region: PRK15458"
/db_xref="CDD:185355"
gene 3270738..3271247
/gene="agaV"
/locus_tag="SF3168"
/db_xref="GeneID:1027160"
CDS 3270738..3271247
/gene="agaV"
/locus_tag="SF3168"
/note="Code: G; COG: COG3444"
/codon_start=1
/transl_table=11
/product="PTS system N-acetylgalactosamine-specific
transporter subunit IIB"
/protein_id="NP_708930.1"
/db_xref="GeneID:1027160"
/translation="MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVL
VANDEVAEDPVQQNLMEMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFL
TLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTE
PAVDLFKLL"
misc_feature 3270774..3271244
/gene="agaV"
/locus_tag="SF3168"
/note="PTS N-acetylgalactosamine transporter subunit IIB;
Region: PRK11425"
/db_xref="CDD:183129"
misc_feature order(3270795..3270797,3270807..3270809,3270816..3270818)
/gene="agaV"
/locus_tag="SF3168"
/note="active site"
/db_xref="CDD:237975"
misc_feature 3270816..3270818
/gene="agaV"
/locus_tag="SF3168"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:237975"
gene 3271258..3272037
/gene="agaW"
/locus_tag="SF3169"
/db_xref="GeneID:1023770"
CDS 3271258..3272037
/gene="agaW"
/locus_tag="SF3169"
/codon_start=1
/transl_table=11
/product="PTS system N-acetylgalactosamine-specific
transporter subunit IIC"
/protein_id="NP_708931.1"
/db_xref="GeneID:1023770"
/translation="MEISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLG
DLHTGILTGDTLELVWMGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPF
AVAVQMGITFLFSVMSGVMSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIY
FGAEHAKTIIDVLPQRLIDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAATW
LKLPVLAIAAAALAMALIDLLRKSPEPTQPAAQKEEFEDGI"
misc_feature 3271288..3272034
/gene="agaW"
/locus_tag="SF3169"
/note="PTS N-acetylgalactosamine transporter subunit IIC;
Region: AgaW; NF040757"
/db_xref="CDD:468717"
gene 3272027..3272836
/gene="agaE"
/locus_tag="SF3170"
/db_xref="GeneID:1027151"
CDS 3272027..3272836
/gene="agaE"
/locus_tag="SF3170"
/codon_start=1
/transl_table=11
/product="PTS system N-acetylgalactosamine-specific
transporter subunit IID"
/protein_id="NP_708932.2"
/db_xref="GeneID:1027151"
/translation="MASNQTTLPNVSENEETLLTGVNENVYEDRSIAAELTKKDINRV
AWRSMLLQASFNYERMQASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVT
FVIGIILAMERSKQDVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGS
ILGAVVFIVLFNVVHLGLRFGLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGA
LVATYVRLSTTLEITAGDAVVKLQADVIDKLMPAFLPLVYTLTMFWLVRRG"
misc_feature 3272027..3272833
/gene="agaE"
/locus_tag="SF3170"
/note="PTS N-acetylgalactosamine transporter subunit IID;
Region: AgaE; NF040760"
/db_xref="CDD:468720"
gene 3272923..3273357
/gene="agaF"
/locus_tag="SF3171"
/db_xref="GeneID:1027196"
CDS 3272923..3273357
/gene="agaF"
/locus_tag="SF3171"
/note="Code: G; COG: COG2893"
/codon_start=1
/transl_table=11
/product="PTS system N-acetylgalactosamine-specific
transporter subunit IIA"
/protein_id="NP_708933.1"
/db_xref="GeneID:1027196"
/translation="MLSIILTGHGGFASGMEKAMKQILGDQSQFIAIDFPETSSAALL
TSQLEEAIAQLDCEDGIVFLTDLLGGTPFRVASTLAMQKPGCEVITGTNLQLLLEMVL
EREGLSGEEFRVQALECGHRGLTSLVDELGRCHEECPVEEGI"
misc_feature 3272923..3273354
/gene="agaF"
/locus_tag="SF3171"
/note="PTS galactosamine/N-acetylgalactosamine transporter
subunit IIA; Region: AgaF; NF040761"
/db_xref="CDD:468721"
gene 3273354..3273797
/gene="agaA"
/locus_tag="SF3172"
/db_xref="GeneID:1025960"
CDS 3273354..3273797
/gene="agaA"
/locus_tag="SF3172"
/codon_start=1
/transl_table=11
/product="N-acetylglucosamine-6-phosphate deacetylase"
/protein_id="NP_708934.2"
/db_xref="GeneID:1025960"
/translation="MTHVLRARRLLTEEGWFDDHQLRVADGVIAAIEPIPVGVTERDA
ERLCPAYIDTHVHGGAGVDVMDDAPDVLDKLAMHKAREGVGSWLPTTVTAPLNTIHAA
LKRIAQRCQRGGPGAQVLGSYLEGPYFTPQNKGAHPPGNAANLLI"
misc_feature 3273363..>3273770
/gene="agaA"
/locus_tag="SF3172"
/note="N-acetylglucosamine-6-phosphate deacetylase
[Carbohydrate transport and metabolism]; Region: NagA;
COG1820"
/db_xref="CDD:441425"
mobile_element 3273771..3274538
/mobile_element_type="insertion sequence:IS1"
gene 3273826..3274101
/gene="insA"
/locus_tag="SF3173"
/db_xref="GeneID:1027173"
CDS 3273826..3274101
/gene="insA"
/locus_tag="SF3173"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708935.1"
/db_xref="GeneID:1027173"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature 3273847..>3274098
/gene="insA"
/locus_tag="SF3173"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3274128..3274523
/gene="insB"
/locus_tag="SF3174"
/db_xref="GeneID:1027163"
CDS 3274128..3274523
/gene="insB"
/locus_tag="SF3174"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708936.1"
/db_xref="GeneID:1027163"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 3274131..3274520
/gene="insB"
/locus_tag="SF3174"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 3274778..3275581
/gene="agaC"
/locus_tag="SF3175"
/db_xref="GeneID:1027152"
CDS 3274778..3275581
/gene="agaC"
/locus_tag="SF3175"
/codon_start=1
/transl_table=11
/product="PTS system N-acetylgalactosamine-specific
transporter subunit IIC"
/protein_id="NP_708937.1"
/db_xref="GeneID:1027152"
/translation="MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAIL
GDIQTGLITGGLTELAFAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLP
FSLLMQYVILFFYSAFSLFMTKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCT
YLAQGAMQALVKAMPAWLTHGFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVC
YIRVSNLLPVAVLGAGFAVYEFFNAKSRQQAQPQPVASKNEEEDYSNGI"
misc_feature 3274778..3275578
/gene="agaC"
/locus_tag="SF3175"
/note="PTS N-acetylgalactosamine transporter subunit IIC;
Region: PRK09757"
/db_xref="CDD:236621"
gene 3275571..3276362
/gene="agaD"
/locus_tag="SF3176"
/db_xref="GeneID:1025066"
CDS 3275571..3276362
/gene="agaD"
/locus_tag="SF3176"
/codon_start=1
/transl_table=11
/product="PTS system N-acetylgalactosamine-specific
transporter subunit IID"
/protein_id="NP_708938.2"
/db_xref="GeneID:1025066"
/translation="MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKK
IYKDDKPGLSAAMKDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPI
AGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGV
KAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFDK
VFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL"
misc_feature 3275571..3276359
/gene="agaD"
/locus_tag="SF3176"
/note="PTS N-acetylgalactosamine transporter subunit IID;
Region: PRK09855"
/db_xref="CDD:182115"
gene 3276363..3277118
/gene="agaI"
/locus_tag="SF3177"
/db_xref="GeneID:1027174"
CDS 3276363..3277118
/gene="agaI"
/locus_tag="SF3177"
/note="Code: G; COG: COG0363"
/codon_start=1
/transl_table=11
/product="galactosamine-6-phosphate isomerase"
/protein_id="NP_708939.1"
/db_xref="GeneID:1027174"
/translation="MERGTASGGASLLKEFHPVQTLQQVENYTALSERASEYLLAVIR
SKPDAVICLATGATPLLTYHYLVEKIHQQQVDISQLTFVKLDEWVDLPLTMPGTCETF
LQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARKGGLDLCVLGLGKNGHLGLN
EPGESLQPACHISQLDARTQQHEMLKTTGRPVTRGITLGLKDILNAREVLLLVTGEGK
QDATERFLTAKVSTAIPASFLWLHSNFICLINT"
misc_feature 3276420..3277115
/gene="agaI"
/locus_tag="SF3177"
/note="galactosamine-6-phosphate isomerase; Provisional;
Region: PRK09762"
/db_xref="CDD:182064"
misc_feature order(3276525..3276536,3276615..3276620,3276810..3276815,
3276828..3276830,3276834..3276836,3276912..3276914,
3277014..3277016)
/gene="agaI"
/locus_tag="SF3177"
/note="active site"
/db_xref="CDD:238693"
misc_feature order(3276849..3276851,3276855..3276860,3276882..3276884,
3277038..3277058,3277080..3277088)
/gene="agaI"
/locus_tag="SF3177"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:238693"
misc_feature order(3276852..3276857,3276873..3276884)
/gene="agaI"
/locus_tag="SF3177"
/note="allosteric site [active]"
/db_xref="CDD:238693"
misc_feature order(3276888..3276890,3276897..3276899,3276900..3276926,
3276933..3276938)
/gene="agaI"
/locus_tag="SF3177"
/note="active site lid [active]"
/db_xref="CDD:238693"
misc_feature 3277519..3278880
/note="Similar to Escherichia coli K12 fimbrial-like
protein gi: 1789531 (195 aa). BLAST with identity of 96%
in 454 aa. This CDS has been disrupted by insertion. The
sequence has been checked and is believed to be correct."
mobile_element complement(3277612..3278379)
/mobile_element_type="insertion sequence:IS1"
gene complement(3277627..3278022)
/gene="insB"
/locus_tag="SF3179"
/db_xref="GeneID:1027168"
CDS complement(3277627..3278022)
/gene="insB"
/locus_tag="SF3179"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_708940.1"
/db_xref="GeneID:1027168"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(3277630..3278019)
/gene="insB"
/locus_tag="SF3179"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(3278049..3278324)
/gene="insA"
/locus_tag="SF3180"
/db_xref="GeneID:1027170"
CDS complement(3278049..3278324)
/gene="insA"
/locus_tag="SF3180"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_708941.1"
/db_xref="GeneID:1027170"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<3278052..3278303)
/gene="insA"
/locus_tag="SF3180"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3278960..3279655
/locus_tag="SF3181"
/db_xref="GeneID:1026847"
CDS 3278960..3279655
/locus_tag="SF3181"
/codon_start=1
/transl_table=11
/product="chaperone"
/protein_id="YP_008439285.1"
/db_xref="GeneID:1026847"
/translation="MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAAL
PVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEASDDSSLRIIKTADNLPENK
ESLFYINVRAIPAKKKSDDVNANELTLVFKTRVKMFYRPAHLKGRVNDAWKSLEFKRS
DHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAIND
YGGSSGTETRPLQ"
misc_feature 3278966..3279628
/locus_tag="SF3181"
/note="P pilus assembly protein, chaperone PapD
[Extracellular structures]; Region: FimC; COG3121"
/db_xref="CDD:442355"
misc_feature 3279684..3283536
/note="Similar to Escherichia coli K12 outer membrane
protein gi: 1789533 (839 aa). BLAST with identity of 98%
in 1284 aa. This CDS has been disrupted by insertion. The
sequence has been checked and is believed to be correct."
mobile_element complement(3281409..3282739)
/mobile_element_type="insertion sequence:IS2"
gene complement(3281420..3282259)
/locus_tag="SF3184"
/pseudogene="unknown"
/db_xref="GeneID:1027167"
gene complement(3282283..3282693)
/locus_tag="SF3185"
/db_xref="GeneID:1027157"
CDS complement(3282283..3282693)
/locus_tag="SF3185"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_708945.3"
/db_xref="GeneID:1027157"
/translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMKNELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature complement(3282286..3282648)
/locus_tag="SF3185"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 3283547..3284638
/gene="yraK"
/locus_tag="SF3186"
/db_xref="GeneID:1027166"
CDS 3283547..3284638
/gene="yraK"
/locus_tag="SF3186"
/codon_start=1
/transl_table=11
/product="fimbrial protein"
/protein_id="NP_708946.2"
/db_xref="GeneID:1027166"
/translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT
VNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLND
SLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTA
PQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMR
IDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVN
MRAWPVNLVGGELETGKFQGTATITVMVR"
misc_feature 3283610..3284635
/gene="yraK"
/locus_tag="SF3186"
/note="fimbrial protein; Region: PRK15297"
/db_xref="CDD:185197"
misc_feature 3284174..3284626
/gene="yraK"
/locus_tag="SF3186"
/note="Fimbrial protein; Region: Fimbrial; pfam00419"
/db_xref="CDD:425671"
gene complement(3284681..3285541)
/gene="yraL"
/locus_tag="SF3187"
/db_xref="GeneID:1027135"
CDS complement(3284681..3285541)
/gene="yraL"
/locus_tag="SF3187"
/note="Code: R; COG: COG0313"
/codon_start=1
/transl_table=11
/product="SAM-dependent 16S ribosomal RNA C1402 ribose
2'-O-methyltransferase"
/protein_id="NP_708947.1"
/db_xref="GeneID:1027135"
/translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRTLEVLQAVDLIAAE
DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNA
LYKYALEQQG"
misc_feature complement(3284684..3285541)
/gene="yraL"
/locus_tag="SF3187"
/note="SAM-dependent 16S ribosomal RNA C1402 ribose
2'-O-methyltransferase; Provisional; Region: PRK14994"
/db_xref="CDD:184956"
misc_feature complement(order(3284927..3284929,3284933..3284935,
3284945..3284947,3285116..3285133,3285137..3285157,
3285161..3285166,3285176..3285184,3285188..3285199,
3285221..3285226,3285233..3285235,3285245..3285259,
3285443..3285445,3285452..3285469,3285473..3285475,
3285494..3285496))
/gene="yraL"
/locus_tag="SF3187"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:381175"
misc_feature complement(order(3284855..3284863,3284948..3284959,
3285035..3285040,3285113..3285115,3285158..3285160,
3285170..3285175,3285242..3285250,3285257..3285265,
3285323..3285325,3285479..3285481))
/gene="yraL"
/locus_tag="SF3187"
/note="putative active site [active]"
/db_xref="CDD:381175"
misc_feature complement(order(3284855..3284863,3284942..3284944,
3284948..3284953,3284957..3284959,3285032..3285037,
3285110..3285112,3285170..3285175,3285242..3285250,
3285257..3285265,3285479..3285481))
/gene="yraL"
/locus_tag="SF3187"
/note="SAM binding site [chemical binding]; other site"
/db_xref="CDD:381175"
gene 3285606..3287642
/gene="yraM"
/locus_tag="SF3188"
/db_xref="GeneID:1027136"
CDS 3285606..3287642
/gene="yraM"
/locus_tag="SF3188"
/note="Code: R; COG: COG3107"
/codon_start=1
/transl_table=11
/product="glycosylase"
/protein_id="NP_708948.2"
/db_xref="GeneID:1027136"
/translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQ
ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKT
LLAAEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
QEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI
QQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTADSVASPAQASVSDLTGDQPAAQ
PVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNV
EELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIP
RSALGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITPRATT
DSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATL
YASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMG
VDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS"
misc_feature 3285606..3287639
/gene="yraM"
/locus_tag="SF3188"
/note="Outer membrane lipoprotein LpoA, binds and
activates PBP1a [Cell wall/membrane/envelope biogenesis];
Region: LpoA; COG3107"
/db_xref="CDD:442341"
misc_feature 3285801..3285881
/gene="yraM"
/locus_tag="SF3188"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276808"
misc_feature 3285900..3285986
/gene="yraM"
/locus_tag="SF3188"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276808"
gene 3287600..3287995
/gene="yraN"
/locus_tag="SF3189"
/db_xref="GeneID:1027125"
CDS 3287600..3287995
/gene="yraN"
/locus_tag="SF3189"
/note="Code: L; COG: COG0792"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708949.1"
/db_xref="GeneID:1027125"
/translation="MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVN
ERGGEIDLIMREGLTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
misc_feature 3287621..3287983
/gene="yraN"
/locus_tag="SF3189"
/note="TIGR00252 family protein; Region: TIGR00252"
/db_xref="CDD:129354"
gene 3288015..3288605
/gene="yraO"
/locus_tag="SF3190"
/db_xref="GeneID:1024422"
CDS 3288015..3288605
/gene="yraO"
/locus_tag="SF3190"
/note="Code: G; COG: COG0279"
/codon_start=1
/transl_table=11
/product="chromosome replication initiator DnaA"
/protein_id="NP_708950.1"
/db_xref="GeneID:1024422"
/translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
misc_feature 3288015..3288602
/gene="yraO"
/locus_tag="SF3190"
/note="DnaA initiator-associating protein DiaA;
Provisional; Region: PRK10886"
/db_xref="CDD:182811"
misc_feature order(3288048..3288050,3288060..3288062,3288096..3288098,
3288105..3288107,3288165..3288167,3288183..3288188,
3288528..3288533,3288543..3288545,3288552..3288554,
3288564..3288566,3288576..3288578)
/gene="yraO"
/locus_tag="SF3190"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:240139"
misc_feature order(3288159..3288167,3288363..3288371,3288378..3288380,
3288516..3288518,3288528..3288530)
/gene="yraO"
/locus_tag="SF3190"
/note="active site"
/db_xref="CDD:240139"
gene 3288615..3289190
/gene="yraP"
/locus_tag="SF3191"
/db_xref="GeneID:1027140"
CDS 3288615..3289190
/gene="yraP"
/locus_tag="SF3191"
/note="Code: R; COG: COG2823"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="NP_708951.1"
/db_xref="GeneID:1027140"
/translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
VDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
misc_feature 3288615..3289187
/gene="yraP"
/locus_tag="SF3191"
/note="divisome-associated lipoprotein YraP; Region:
PRK11023"
/db_xref="CDD:182907"
gene complement(3289304..3290344)
/gene="yraQ"
/locus_tag="SF3192"
/db_xref="GeneID:1027158"
CDS complement(3289304..3290344)
/gene="yraQ"
/locus_tag="SF3192"
/note="Code: R; COG: COG0701"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708952.1"
/db_xref="GeneID:1027158"
/translation="MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTA
AETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLR
TLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPAT
LVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQSGFFS
RWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVI
PTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAV
SGVIVGGLALLF"
misc_feature complement(3289325..3290170)
/gene="yraQ"
/locus_tag="SF3192"
/note="Uncharacterized membrane protein YraQ, UPF0718
family [Function unknown]; Region: YraQ; COG0701"
/db_xref="CDD:440465"
gene complement(3290417..3291097)
/gene="yraR"
/locus_tag="SF3193"
/db_xref="GeneID:1027137"
CDS complement(3290417..3291097)
/gene="yraR"
/locus_tag="SF3193"
/note="Code: MG; COG: COG0702"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708953.1"
/db_xref="GeneID:1027137"
/translation="MSRGAQGRQFCKGTKMSQVLITGATGLVGGHLLRMLINEPKVNA
IAAPTRRPLGDMPGVFNPHDPQLSDALAQVTEPIDIVFCCLGTTRREAGSKEAFIHAD
YTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIAR
PSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPEHEGVTILSS
SELRKRAE"
misc_feature complement(3290435..3291043)
/gene="yraR"
/locus_tag="SF3193"
/note="A large family of proteins that share a
Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
NADB domain is found in numerous dehydrogenases of
metabolic pathways such as glycolysis, and many other
redox enzymes. NAD binding involves numerous...; Region:
Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
/db_xref="CDD:473865"
misc_feature complement(order(3290606..3290617,3290675..3290677,
3290687..3290689,3290720..3290728,3290840..3290848,
3290945..3290953,3291014..3291016,3291020..3291025,
3291029..3291031))
/gene="yraR"
/locus_tag="SF3193"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature complement(order(3290675..3290677,3290687..3290689,
3290720..3290722,3290792..3290794))
/gene="yraR"
/locus_tag="SF3193"
/note="active site"
/db_xref="CDD:187535"
gene 3291138..3291698
/gene="yhbO"
/locus_tag="SF3194"
/db_xref="GeneID:1027127"
CDS 3291138..3291698
/gene="yhbO"
/locus_tag="SF3194"
/note="Code: R; COG: COG0693"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708954.1"
/db_xref="GeneID:1027127"
/translation="MENSPHPMQQRGGSMSKKIAVLITDEFEDSEFTSPADEFRKAGH
EVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVT
FTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGVEFYDQEVVVD
KDQLVTSRTPDDLPAFNREALRLLGA"
misc_feature 3291189..3291692
/gene="yhbO"
/locus_tag="SF3194"
/note="intracellular protease, PfpI family; Region: PfpI;
TIGR01382"
/db_xref="CDD:273591"
misc_feature 3291489..3291494
/gene="yhbO"
/locus_tag="SF3194"
/note="proposed catalytic triad [active]"
/db_xref="CDD:153228"
misc_feature 3291489..3291491
/gene="yhbO"
/locus_tag="SF3194"
/note="conserved cys residue [active]"
/db_xref="CDD:153228"
gene complement(3291678..3292121)
/gene="yhbP"
/locus_tag="SF3195"
/db_xref="GeneID:1027138"
CDS complement(3291678..3292121)
/gene="yhbP"
/locus_tag="SF3195"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708955.1"
/db_xref="GeneID:1027138"
/translation="METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN
RRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
misc_feature complement(3291699..3292121)
/gene="yhbP"
/locus_tag="SF3195"
/note="hypothetical protein; Provisional; Region:
PRK03467"
/db_xref="CDD:235127"
gene 3292172..3292474
/gene="yhbQ"
/locus_tag="SF3196"
/db_xref="GeneID:1027134"
CDS 3292172..3292474
/gene="yhbQ"
/locus_tag="SF3196"
/note="Code: L; COG: COG2827"
/codon_start=1
/transl_table=11
/product="GIY-YIG nuclease superfamily protein"
/protein_id="NP_708956.2"
/db_xref="GeneID:1027134"
/translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD"
misc_feature 3292172..3292417
/gene="yhbQ"
/locus_tag="SF3196"
/note="GIY-YIG nuclease superfamily protein; Validated;
Region: PRK00329"
/db_xref="CDD:178979"
misc_feature order(3292184..3292192,3292220..3292228)
/gene="yhbQ"
/locus_tag="SF3196"
/note="GIY-YIG motif/motif A; other site"
/db_xref="CDD:198403"
misc_feature order(3292190..3292192,3292220..3292222,3292226..3292228,
3292250..3292252,3292262..3292264,3292361..3292363)
/gene="yhbQ"
/locus_tag="SF3196"
/note="putative active site [active]"
/db_xref="CDD:198403"
misc_feature 3292361..3292363
/gene="yhbQ"
/locus_tag="SF3196"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:198403"
gene complement(3292461..3292964)
/gene="yhbS"
/locus_tag="SF3197"
/db_xref="GeneID:1027172"
CDS complement(3292461..3292964)
/gene="yhbS"
/locus_tag="SF3197"
/note="Code: R; COG: COG3153"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708957.1"
/db_xref="GeneID:1027172"
/translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFLVHRLADDALNGVTGLVEY
HEHFNRF"
misc_feature complement(3292527..3292958)
/gene="yhbS"
/locus_tag="SF3197"
/note="Predicted N-acetyltransferase YhbS [General
function prediction only]; Region: yhbS; COG3153"
/db_xref="CDD:442387"
gene complement(3292958..3293482)
/gene="yhbT"
/locus_tag="SF3198"
/db_xref="GeneID:1027171"
CDS complement(3292958..3293482)
/gene="yhbT"
/locus_tag="SF3198"
/note="Code: I; COG: COG3154"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708958.2"
/db_xref="GeneID:1027171"
/translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNTQADVSFSADASDLLMIAA
RKQDPDTLFFQRRLVIEGDTELGVYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
TAPETKQTSVGEPC"
misc_feature complement(3292988..3293464)
/gene="yhbT"
/locus_tag="SF3198"
/note="Ubiquinone biosynthesis accessory factor UbiT,
lipid carrier SCP2 domain [Coenzyme transport and
metabolism]; Region: UbiT; COG3154"
/db_xref="CDD:442388"
gene 3293691..3294686
/gene="yhbU"
/locus_tag="SF3199"
/db_xref="GeneID:1027130"
CDS 3293691..3294686
/gene="yhbU"
/locus_tag="SF3199"
/note="Code: O; COG: COG0826"
/codon_start=1
/transl_table=11
/product="collagenase"
/protein_id="NP_708959.2"
/db_xref="GeneID:1027130"
/translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
AAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
SPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
misc_feature 3293691..3294674
/gene="yhbU"
/locus_tag="SF3199"
/note="23S rRNA C2501 and tRNA U34 5'-hydroxylation
protein RlhA/YrrN/YrrO, U32 peptidase family [Translation,
ribosomal structure and biogenesis]; Region: RlhA;
COG0826"
/db_xref="CDD:440588"
gene 3294695..3295573
/gene="yhbV"
/locus_tag="SF3200"
/db_xref="GeneID:1027144"
CDS 3294695..3295573
/gene="yhbV"
/locus_tag="SF3200"
/note="Code: O; COG: COG0826"
/codon_start=1
/transl_table=11
/product="protease"
/protein_id="NP_708960.1"
/db_xref="GeneID:1027144"
/translation="MKYSLGPVLWYWPKETLEDFYQQAAASSADVIYLGEAVCSKRRA
TKVGDCLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
GIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAVPLPLTANS
DCNGYWRRLAGLELQA"
misc_feature 3294695..3295570
/gene="yhbV"
/locus_tag="SF3200"
/note="putative protease; Provisional; Region: PRK15447"
/db_xref="CDD:237968"
gene 3295654..3296661
/gene="yhbW"
/locus_tag="SF3201"
/db_xref="GeneID:1026850"
CDS 3295654..3296661
/gene="yhbW"
/locus_tag="SF3201"
/note="Code: C; COG: COG2141"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708961.1"
/db_xref="GeneID:1026850"
/translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHLPLVIAEQFGTLNTLY
PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYDV
QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
G"
misc_feature 3295654..3296652
/gene="yhbW"
/locus_tag="SF3201"
/note="luciferase-like monooxygenase; Region: PRK10508"
/db_xref="CDD:182505"
gene complement(3296779..3298023)
/gene="mtr"
/locus_tag="SF3202"
/db_xref="GeneID:1027142"
CDS complement(3296779..3298023)
/gene="mtr"
/locus_tag="SF3202"
/note="Code: E; COG: COG0814"
/codon_start=1
/transl_table=11
/product="tryptophan permease"
/protein_id="NP_708962.1"
/db_xref="GeneID:1027142"
/translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK
VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAVGRLKTALLTFAPPV
VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMIALIL
VFGVGNALVHILSSFNLLPVYQ"
misc_feature complement(3296782..3298023)
/gene="mtr"
/locus_tag="SF3202"
/note="tryptophan permease; Provisional; Region: PRK10483"
/db_xref="CDD:182492"
gene complement(3298177..3300117)
/gene="deaD"
/locus_tag="SF3203"
/db_xref="GeneID:1027133"
CDS complement(3298177..3300117)
/gene="deaD"
/locus_tag="SF3203"
/note="Code: LKJ; COG: COG0513"
/codon_start=1
/transl_table=11
/product="inducible ATP-independent RNA helicase"
/protein_id="NP_708963.4"
/db_xref="GeneID:1027133"
/translation="MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYE
KPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRE
LAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRG
TLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRF
MKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATL
EVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLV
VNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPN
AELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQ
GERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRI
EVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTR
ILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGE
RREGRAPRRDDSTGRRRFGGDA"
misc_feature complement(3298180..3300066)
/gene="deaD"
/locus_tag="SF3203"
/note="ATP-dependent RNA helicase DeaD; Provisional;
Region: PRK11634"
/db_xref="CDD:236941"
gene complement(3300246..3301130)
/gene="yhbM"
/locus_tag="SF3204"
/db_xref="GeneID:1027139"
CDS complement(3300246..3301130)
/gene="yhbM"
/locus_tag="SF3204"
/note="Code: R; COG: COG0457"
/codon_start=1
/transl_table=11
/product="lipoprotein NlpI"
/protein_id="NP_708964.2"
/db_xref="GeneID:1027139"
/translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALL
ELSLLGQDQDDLAESDQQ"
misc_feature complement(3300249..3301130)
/gene="yhbM"
/locus_tag="SF3204"
/note="lipoprotein NlpI; Provisional; Region: PRK11189"
/db_xref="CDD:236875"
misc_feature complement(3300861..3300947)
/gene="yhbM"
/locus_tag="SF3204"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature complement(order(3300705..3300707,3300714..3300719,
3300726..3300731,3300738..3300740,3300807..3300812,
3300816..3300821,3300828..3300833,3300840..3300842,
3300912..3300914,3300918..3300923,3300930..3300935,
3300942..3300944))
/gene="yhbM"
/locus_tag="SF3204"
/note="putative protein binding surface [polypeptide
binding]; other site"
/db_xref="CDD:276809"
misc_feature complement(3300756..3300848)
/gene="yhbM"
/locus_tag="SF3204"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
misc_feature complement(3300672..3300743)
/gene="yhbM"
/locus_tag="SF3204"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276809"
gene complement(3301239..3303443)
/gene="pnp"
/locus_tag="SF3205"
/db_xref="GeneID:1025664"
CDS complement(3301239..3303443)
/gene="pnp"
/locus_tag="SF3205"
/note="Code: J; COG: COG1185"
/codon_start=1
/transl_table=11
/product="polynucleotide phosphorylase"
/protein_id="NP_708965.2"
/db_xref="GeneID:1025664"
/translation="MRRRSGINTSAVRYCLRKRKDITLLNPIVRKFQYGQHTVTLETG
MMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFR
REGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAA
LSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAEL
LSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEAR
LSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAIEKNVVRSRVLA
GEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELM
GERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRV
VSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDE
DHLGDMDFKVAGSREGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINA
PRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATD
GEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRV
EKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE"
misc_feature complement(3301299..3303368)
/gene="pnp"
/locus_tag="SF3205"
/note="polynucleotide phosphorylase/polyadenylase;
Provisional; Region: PRK11824"
/db_xref="CDD:236995"
gene complement(3303621..3303890)
/gene="rpsO"
/locus_tag="SF3206"
/db_xref="GeneID:1027108"
CDS complement(3303621..3303890)
/gene="rpsO"
/locus_tag="SF3206"
/note="Code: J; COG: COG0184"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S15"
/protein_id="NP_708966.1"
/db_xref="GeneID:1027108"
/translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
misc_feature complement(3303624..3303890)
/gene="rpsO"
/locus_tag="SF3206"
/note="30S ribosomal protein S15; Reviewed; Region: rpsO;
PRK05626"
/db_xref="CDD:180170"
misc_feature complement(order(3303684..3303686,3303696..3303698,
3303735..3303740,3303744..3303749,3303753..3303755,
3303765..3303767,3303774..3303776,3303786..3303788,
3303807..3303809,3303816..3303818,3303867..3303869))
/gene="rpsO"
/locus_tag="SF3206"
/note="16S/18S rRNA binding site [nucleotide binding];
other site"
/db_xref="CDD:238213"
misc_feature complement(order(3303639..3303641,3303651..3303653,
3303771..3303773,3303780..3303782,3303789..3303794,
3303801..3303803))
/gene="rpsO"
/locus_tag="SF3206"
/note="S13e-L30e interaction site [polypeptide binding];
other site"
/db_xref="CDD:238213"
misc_feature complement(order(3303633..3303638,3303699..3303701,
3303711..3303713))
/gene="rpsO"
/locus_tag="SF3206"
/note="25S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:238213"
gene complement(3304039..3304983)
/gene="truB"
/locus_tag="SF3207"
/db_xref="GeneID:1027141"
CDS complement(3304039..3304983)
/gene="truB"
/locus_tag="SF3207"
/note="Code: J; COG: COG0130"
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine synthase B"
/protein_id="NP_708967.1"
/db_xref="GeneID:1027141"
/translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT
GALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLF
IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERIVTLEH
LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA"
misc_feature complement(3304051..3304947)
/gene="truB"
/locus_tag="SF3207"
/note="tRNA U55 pseudouridine synthase TruB, may also work
on U342 of tmRNA [Translation, ribosomal structure and
biogenesis]; Region: TruB; COG0130"
/db_xref="CDD:439900"
gene complement(3304983..3305384)
/gene="rbfA"
/locus_tag="SF3208"
/db_xref="GeneID:1027155"
CDS complement(3304983..3305384)
/gene="rbfA"
/locus_tag="SF3208"
/note="Code: J; COG: COG0858"
/codon_start=1
/transl_table=11
/product="ribosome-binding factor A"
/protein_id="NP_708968.2"
/db_xref="GeneID:1027155"
/translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
misc_feature complement(3305016..3305384)
/gene="rbfA"
/locus_tag="SF3208"
/note="30S ribosome-binding factor RbfA; Region: rbfA;
PRK00521"
/db_xref="CDD:234787"
gene complement(3305548..3308196)
/gene="infB"
/locus_tag="SF3209"
/db_xref="GeneID:1027145"
CDS complement(3305548..3308196)
/gene="infB"
/locus_tag="SF3209"
/note="Code: J; COG: COG0532"
/codon_start=1
/transl_table=11
/product="translation initiation factor IF-2"
/protein_id="NP_708969.1"
/db_xref="GeneID:1027145"
/translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT
LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
AAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKN
AQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSS
DYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRG
GKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAM
ATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHV
DHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARG
AQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQ
YGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFL
DKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLS
GVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVN
IVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNV
RADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKS
PKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIG
VKNYNDVRTGDVIEVFEIIEIQRTIA"
misc_feature complement(3307915..3308031)
/gene="infB"
/locus_tag="SF3209"
/note="Bacterial translation initiation factor IF-2
associated region; Region: IF2_assoc; pfam08364"
/db_xref="CDD:429947"
misc_feature complement(3307057..>3307947)
/gene="infB"
/locus_tag="SF3209"
/note="MAEBL; Provisional; Region: PTZ00121"
/db_xref="CDD:173412"
misc_feature complement(3307129..3307281)
/gene="infB"
/locus_tag="SF3209"
/note="Translation initiation factor IF-2, N-terminal
region; Region: IF2_N; pfam04760"
/db_xref="CDD:428110"
misc_feature complement(3305554..3307059)
/gene="infB"
/locus_tag="SF3209"
/note="Translation initiation factor IF-2, a GTPase
[Translation, ribosomal structure and biogenesis]; Region:
InfB; COG0532"
/db_xref="CDD:440298"
gene complement(3308221..3309708)
/gene="nusA"
/locus_tag="SF3210"
/db_xref="GeneID:1027147"
CDS complement(3308221..3309708)
/gene="nusA"
/locus_tag="SF3210"
/note="Code: K; COG: COG0195"
/codon_start=1
/transl_table=11
/product="transcription elongation factor NusA"
/protein_id="NP_708970.1"
/db_xref="GeneID:1027147"
/translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEA
VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL
LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAA
RGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA"
misc_feature complement(3308281..3309708)
/gene="nusA"
/locus_tag="SF3210"
/note="transcription elongation factor NusA; Validated;
Region: nusA; PRK09202"
/db_xref="CDD:236410"
gene complement(3309736..3310194)
/gene="yhbC"
/locus_tag="SF3211"
/db_xref="GeneID:1027146"
CDS complement(3309736..3310194)
/gene="yhbC"
/locus_tag="SF3211"
/note="Code: S; COG: COG0779"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708971.4"
/db_xref="GeneID:1027146"
/translation="MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDS
EDGINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVT
LVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
misc_feature complement(3309739..3310188)
/gene="yhbC"
/locus_tag="SF3211"
/note="Sm and related proteins; Region: Sm_like; cl00259"
/db_xref="CDD:469694"
misc_feature complement(order(3309754..3309771,3309775..3309780,
3309784..3309789,3309811..3309813,3309832..3309834,
3309850..3309852,3309856..3309858,3309877..3309879,
3309883..3309885))
/gene="yhbC"
/locus_tag="SF3211"
/note="putative oligomer interface [polypeptide binding];
other site"
/db_xref="CDD:212481"
misc_feature complement(order(3309778..3309780,3309820..3309822,
3309826..3309828))
/gene="yhbC"
/locus_tag="SF3211"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:212481"
misc_feature 3310371..3310733
/note="potential protein location (hypothetical protein
SF3212 [Shigella flexneri 2a str. 301]) that overlaps RNA
(tRNA-M)"
gene complement(3310395..3310471)
/locus_tag="SF4509"
/db_xref="GeneID:3161817"
tRNA complement(3310395..3310471)
/locus_tag="SF4509"
/product="tRNA-Met"
/codon_recognized="AUG"
/db_xref="GeneID:3161817"
gene 3310819..3312162
/gene="argG"
/locus_tag="SF3213"
/db_xref="GeneID:1027111"
CDS 3310819..3312162
/gene="argG"
/locus_tag="SF3213"
/note="Code: E; COG: COG0137"
/codon_start=1
/transl_table=11
/product="argininosuccinate synthase"
/protein_id="NP_708973.1"
/db_xref="GeneID:1027111"
/translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMS
DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGLPQVENMENKGQ"
misc_feature 3310819..3312156
/gene="argG"
/locus_tag="SF3213"
/note="argininosuccinate synthase; Validated; Region:
PRK05370"
/db_xref="CDD:235434"
gene complement(3312170..3313814)
/gene="yhbX"
/locus_tag="SF3214"
/pseudo
/db_xref="GeneID:1026851"
misc_feature complement(3312170..3313814)
/gene="yhbX"
/locus_tag="SF3214"
/note="Similar to Escherichia coli K12 alkaline
phosphatase I gi: 1789564 (548 aa). BLAST with identity of
99% in 548 aa. This CDS contains an in-frame stop codon.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(3314255..3314341)
/locus_tag="SF4510"
/db_xref="GeneID:3161814"
tRNA complement(3314255..3314341)
/locus_tag="SF4510"
/product="tRNA-Leu"
/codon_recognized="CUC"
/db_xref="GeneID:3161814"
gene complement(3314356..3314688)
/gene="secG"
/locus_tag="SF3215"
/db_xref="GeneID:1027143"
CDS complement(3314356..3314688)
/gene="secG"
/locus_tag="SF3215"
/note="Code: N; COG: COG1314"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecG"
/protein_id="NP_708974.1"
/db_xref="GeneID:1027143"
/translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNRGSEWENLSAPAKTEQTQPAAPA
KPTSDIPN"
misc_feature complement(3314416..3314688)
/gene="secG"
/locus_tag="SF3215"
/note="Protein translocase subunit SecG [Intracellular
trafficking, secretion, and vesicular transport]; Region:
SecG; COG1314"
/db_xref="CDD:440925"
gene complement(3314915..3316252)
/gene="glmM"
/locus_tag="SF3216"
/db_xref="GeneID:1024974"
CDS complement(3314915..3316252)
/gene="glmM"
/locus_tag="SF3216"
/note="Code: G; COG: COG1109"
/codon_start=1
/transl_table=11
/product="phosphoglucosamine mutase"
/protein_id="NP_708975.1"
/db_xref="GeneID:1024974"
/translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
IIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVYGDQIMYIIAREGLRQGHL
RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
KTTTGAGIVAGLQVLTAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDAAQVTEFAHRITDAVKAV"
misc_feature complement(3314918..3316243)
/gene="glmM"
/locus_tag="SF3216"
/note="phosphoglucosamine mutase; Provisional; Region:
glmM; PRK10887"
/db_xref="CDD:236787"
misc_feature complement(order(3314993..3314995,3315008..3315016,
3315020..3315022,3315266..3315268,3315272..3315274,
3315278..3315280,3315329..3315337,3315398..3315400,
3315515..3315520,3315524..3315526,3315530..3315532,
3315917..3315919,3315941..3315949,3316214..3316216,
3316223..3316225,3316229..3316231))
/gene="glmM"
/locus_tag="SF3216"
/note="active site"
/db_xref="CDD:100095"
misc_feature complement(order(3314993..3314995,3315008..3315016,
3315020..3315022,3315266..3315268,3315272..3315274,
3315278..3315280,3315329..3315331,3315335..3315337,
3315398..3315400,3315515..3315517,3315947..3315949,
3316223..3316225))
/gene="glmM"
/locus_tag="SF3216"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100095"
misc_feature complement(order(3315518..3315520,3315524..3315526,
3315530..3315532,3315947..3315949))
/gene="glmM"
/locus_tag="SF3216"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:100095"
gene complement(3316245..3317138)
/gene="folP"
/locus_tag="SF3217"
/db_xref="GeneID:1027106"
CDS complement(3316245..3317138)
/gene="folP"
/locus_tag="SF3217"
/note="Code: H; COG: COG0294"
/codon_start=1
/transl_table=11
/product="7,8-dihydropteroate synthase"
/protein_id="NP_708976.4"
/db_xref="GeneID:1027106"
/translation="MLRGFFLSIHTRDNIMKLFAQGTSLDLSHPHVMGILNVTPDSFS
DGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQ
RFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNP
KTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLAR
LAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKE
TVEAMRVVEATLSAKENKRYE"
misc_feature complement(3316248..3317093)
/gene="folP"
/locus_tag="SF3217"
/note="dihydropteroate synthase; Provisional; Region:
folP; PRK11613"
/db_xref="CDD:183230"
misc_feature complement(order(3316323..3316325,3316329..3316331,
3316431..3316433,3316443..3316445,3316539..3316541,
3316677..3316679,3316743..3316745,3316749..3316751,
3316806..3316808,3317028..3317030))
/gene="folP"
/locus_tag="SF3217"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:238380"
misc_feature complement(order(3316299..3316304,3316347..3316349,
3316359..3316361,3316371..3316373,3316485..3316490,
3316500..3316502))
/gene="folP"
/locus_tag="SF3217"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238380"
misc_feature complement(3316431..3316439)
/gene="folP"
/locus_tag="SF3217"
/note="inhibitor binding site [active]"
/db_xref="CDD:238380"
gene complement(3317183..3319117)
/gene="hflB"
/locus_tag="SF3218"
/db_xref="GeneID:1027156"
CDS complement(3317183..3319117)
/gene="hflB"
/locus_tag="SF3218"
/note="Code: O; COG: COG0465"
/codon_start=1
/transl_table=11
/product="ATP-dependent metalloprotease"
/protein_id="NP_708977.1"
/db_xref="GeneID:1027156"
/translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI
MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP
VDEPRTPNPGNTMSEQLGDK"
misc_feature complement(3317186..3319117)
/gene="hflB"
/locus_tag="SF3218"
/note="ATP-dependent zinc metalloprotease FtsH; Region:
hflB; PRK10733"
/db_xref="CDD:182683"
gene complement(3319217..3319846)
/gene="rrmJ"
/locus_tag="SF3219"
/db_xref="GeneID:1027113"
CDS complement(3319217..3319846)
/gene="rrmJ"
/locus_tag="SF3219"
/note="Code: J; COG: COG0293"
/codon_start=1
/transl_table=11
/product="23S rRNA methyltransferase"
/protein_id="NP_708978.1"
/db_xref="GeneID:1027113"
/translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
misc_feature complement(3319223..3319846)
/gene="rrmJ"
/locus_tag="SF3219"
/note="23S rRNA (uridine(2552)-2'-O)-methyltransferase
RlmE; Region: rrmJ; PRK11188"
/db_xref="CDD:183025"
misc_feature complement(order(3319475..3319477,3319547..3319555,
3319595..3319600,3319655..3319675))
/gene="rrmJ"
/locus_tag="SF3219"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 3319972..3320265
/gene="yhbY"
/locus_tag="SF3220"
/db_xref="GeneID:1027149"
CDS 3319972..3320265
/gene="yhbY"
/locus_tag="SF3220"
/note="Code: J; COG: COG1534"
/codon_start=1
/transl_table=11
/product="RNA-binding protein YhbY"
/protein_id="NP_708979.1"
/db_xref="GeneID:1027149"
/translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
misc_feature 3319972..3320262
/gene="yhbY"
/locus_tag="SF3220"
/note="ribosome assembly RNA-binding protein YhbY; Region:
PRK10343"
/db_xref="CDD:182393"
gene complement(3320421..3320897)
/gene="greA"
/locus_tag="SF3221"
/db_xref="GeneID:1027148"
CDS complement(3320421..3320897)
/gene="greA"
/locus_tag="SF3221"
/note="Code: K; COG: COG0782"
/codon_start=1
/transl_table=11
/product="transcription elongation factor GreA"
/protein_id="NP_708980.1"
/db_xref="GeneID:1027148"
/translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
misc_feature complement(3320427..3320897)
/gene="greA"
/locus_tag="SF3221"
/note="transcription elongation factor GreA; Reviewed;
Region: greA; PRK00226"
/db_xref="CDD:234693"
gene 3321145..3322578
/gene="dacB"
/locus_tag="SF3222"
/db_xref="GeneID:1027110"
CDS 3321145..3322578
/gene="dacB"
/locus_tag="SF3222"
/note="Code: M; COG: COG2027"
/codon_start=1
/transl_table=11
/product="D-alanyl-D-alanine
carboxypeptidase/endopeptidase"
/protein_id="NP_708981.1"
/db_xref="GeneID:1027110"
/translation="MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVG
ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
LDVVPSDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
KPADQRNRRIPLVRFESRLYKDIYQNN"
misc_feature 3321145..3322575
/gene="dacB"
/locus_tag="SF3222"
/note="D-alanyl-D-alanine carboxypeptidase/endopeptidase;
Provisional; Region: PRK11113"
/db_xref="CDD:182972"
gene complement(3322764..3323936)
/gene="obgE"
/locus_tag="SF3223"
/db_xref="GeneID:1027132"
CDS complement(3322764..3323936)
/gene="obgE"
/locus_tag="SF3223"
/note="Code: R; COG: COG0536"
/codon_start=1
/transl_table=11
/product="GTPase CgtA"
/protein_id="NP_708982.1"
/db_xref="GeneID:1027132"
/translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE
NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
misc_feature complement(3322767..3323936)
/gene="obgE"
/locus_tag="SF3223"
/note="GTPase CgtA; Reviewed; Region: obgE; PRK12298"
/db_xref="CDD:237047"
gene complement(3323952..3324917)
/gene="yhbE"
/locus_tag="SF3224"
/db_xref="GeneID:1027118"
CDS complement(3323952..3324917)
/gene="yhbE"
/locus_tag="SF3224"
/note="Code: GER; COG: COG0697"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708983.1"
/db_xref="GeneID:1027118"
/translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG
VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE"
misc_feature complement(3324012..3324896)
/gene="yhbE"
/locus_tag="SF3224"
/note="Permease of the drug/metabolite transporter (DMT)
superfamily [Carbohydrate transport and metabolism, Amino
acid transport and metabolism, General function prediction
only]; Region: RhaT; COG0697"
/db_xref="CDD:440461"
gene complement(3325044..3325301)
/gene="rpmA"
/locus_tag="SF3225"
/db_xref="GeneID:1027109"
CDS complement(3325044..3325301)
/gene="rpmA"
/locus_tag="SF3225"
/note="Code: J; COG: COG0211"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L27"
/protein_id="NP_708984.1"
/db_xref="GeneID:1027109"
/translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
misc_feature complement(3325053..3325301)
/gene="rpmA"
/locus_tag="SF3225"
/note="50S ribosomal protein L27; Validated; Region: rpmA;
PRK05435"
/db_xref="CDD:235464"
gene complement(3325322..3325633)
/gene="rplU"
/locus_tag="SF3226"
/db_xref="GeneID:1027114"
CDS complement(3325322..3325633)
/gene="rplU"
/locus_tag="SF3226"
/note="Code: J; COG: COG0261"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L21"
/protein_id="NP_708985.1"
/db_xref="GeneID:1027114"
/translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
A"
misc_feature complement(3325325..3325633)
/gene="rplU"
/locus_tag="SF3226"
/note="50S ribosomal protein L21; Validated; Region: rplU;
PRK05573"
/db_xref="CDD:235510"
gene 3325891..3326862
/gene="ispB"
/locus_tag="SF3227"
/db_xref="GeneID:1024423"
CDS 3325891..3326862
/gene="ispB"
/locus_tag="SF3227"
/note="Code: H; COG: COG0142"
/codon_start=1
/transl_table=11
/product="octaprenyl diphosphate synthase"
/protein_id="NP_708986.1"
/db_xref="GeneID:1024423"
/translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR"
misc_feature 3325891..3326859
/gene="ispB"
/locus_tag="SF3227"
/note="octaprenyl diphosphate synthase; Provisional;
Region: PRK10888"
/db_xref="CDD:182813"
misc_feature order(3326116..3326118,3326125..3326133,3326137..3326145,
3326149..3326154,3326167..3326172,3326326..3326328,
3326335..3326337,3326398..3326403,3326410..3326412,
3326521..3326526,3326533..3326535,3326563..3326565,
3326578..3326580,3326593..3326595)
/gene="ispB"
/locus_tag="SF3227"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:173833"
misc_feature 3326125..3326154
/gene="ispB"
/locus_tag="SF3227"
/note="chain length determination region [active]"
/db_xref="CDD:173833"
misc_feature order(3326140..3326145,3326152..3326154,3326167..3326172,
3326335..3326337,3326398..3326400,3326521..3326526,
3326533..3326535,3326563..3326565,3326578..3326580,
3326593..3326595)
/gene="ispB"
/locus_tag="SF3227"
/note="substrate-Mg2+ binding site [active]"
/db_xref="CDD:173833"
misc_feature order(3326140..3326145,3326152..3326154,3326167..3326172,
3326398..3326400,3326521..3326526)
/gene="ispB"
/locus_tag="SF3227"
/note="catalytic residues [active]"
/db_xref="CDD:173833"
misc_feature order(3326140..3326145,3326152..3326154,3326167..3326172,
3326335..3326337,3326398..3326400)
/gene="ispB"
/locus_tag="SF3227"
/note="aspartate-rich region 1; other site"
/db_xref="CDD:173833"
misc_feature order(3326158..3326202,3326542..3326547,3326563..3326580,
3326587..3326601)
/gene="ispB"
/locus_tag="SF3227"
/note="active site lid residues [active]"
/db_xref="CDD:173833"
misc_feature order(3326521..3326526,3326533..3326535,3326563..3326565,
3326578..3326580,3326593..3326595)
/gene="ispB"
/locus_tag="SF3227"
/note="aspartate-rich region 2; other site"
/db_xref="CDD:173833"
gene 3327089..3327367
/gene="nlp"
/locus_tag="SF3228"
/db_xref="GeneID:1027129"
CDS 3327089..3327367
/gene="nlp"
/locus_tag="SF3228"
/note="Code: K; COG: COG3423"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator Nlp"
/protein_id="NP_708987.1"
/db_xref="GeneID:1027129"
/translation="MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK"
misc_feature 3327089..3327364
/gene="nlp"
/locus_tag="SF3228"
/note="DNA-binding transcriptional regulator SfsB; Region:
PRK10344"
/db_xref="CDD:182394"
gene complement(3327415..3328674)
/gene="murA"
/locus_tag="SF3229"
/db_xref="GeneID:1027112"
CDS complement(3327415..3328674)
/gene="murA"
/locus_tag="SF3229"
/note="Code: M; COG: COG0766"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylglucosamine
1-carboxyvinyltransferase"
/protein_id="NP_708988.1"
/db_xref="GeneID:1027112"
/translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
YHIDRGYERIEDKLRALGANIERVKGE"
misc_feature complement(3327427..3328674)
/gene="murA"
/locus_tag="SF3229"
/note="UDP-N-acetylglucosamine 1-carboxyvinyltransferase;
Validated; Region: PRK09369"
/db_xref="CDD:236486"
misc_feature complement(order(3327982..3327993,3328612..3328623))
/gene="murA"
/locus_tag="SF3229"
/note="hinge; other site"
/db_xref="CDD:238796"
misc_feature complement(order(3327760..3327762,3328183..3328188,
3328195..3328197,3328300..3328317,3328390..3328392,
3328402..3328404,3328606..3328608))
/gene="murA"
/locus_tag="SF3229"
/note="active site"
/db_xref="CDD:238796"
gene complement(3328729..3328998)
/gene="yrbA"
/locus_tag="SF3230"
/db_xref="GeneID:1027120"
CDS complement(3328729..3328998)
/gene="yrbA"
/locus_tag="SF3230"
/note="Code: T; COG: COG0271"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708989.1"
/db_xref="GeneID:1027120"
/translation="MIEDPMENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDG
MSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
misc_feature complement(3328741..3328983)
/gene="yrbA"
/locus_tag="SF3230"
/note="Acid stress protein IbaG/YrbA, BolA-like family
[Signal transduction mechanisms]; Region: IbaG; COG5007"
/db_xref="CDD:444031"
gene complement(3329143..3329436)
/gene="yrbB"
/locus_tag="SF3231"
/db_xref="GeneID:1026852"
CDS complement(3329143..3329436)
/gene="yrbB"
/locus_tag="SF3231"
/note="Code: R; COG: COG3113"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708990.2"
/db_xref="GeneID:1026852"
/translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL
SRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR"
misc_feature complement(3329149..3329430)
/gene="yrbB"
/locus_tag="SF3231"
/note="lipid asymmetry maintenance protein MlaB; Region:
mlaB_1; NF033618"
/db_xref="CDD:411237"
gene complement(3329436..3330071)
/gene="yrbC"
/locus_tag="SF3232"
/db_xref="GeneID:1027122"
CDS complement(3329436..3330071)
/gene="yrbC"
/locus_tag="SF3232"
/note="Code: S; COG: COG2854"
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein MlaC"
/protein_id="NP_708991.1"
/db_xref="GeneID:1027122"
/translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
misc_feature complement(3329439..3330071)
/gene="yrbC"
/locus_tag="SF3232"
/note="phospholipid-binding protein MlaC; Region:
PRK15117"
/db_xref="CDD:237912"
gene complement(3330090..3330641)
/gene="vpsC"
/locus_tag="SF3233"
/db_xref="GeneID:1027092"
CDS complement(3330090..3330641)
/gene="vpsC"
/locus_tag="SF3233"
/note="Code: R; COG: COG1463"
/codon_start=1
/transl_table=11
/product="cytoplasmic membrane protein"
/protein_id="NP_708992.2"
/db_xref="GeneID:1027092"
/translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTESTYTLYA
TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
NSGDAPAAAPGNNETTEPVGTTK"
misc_feature complement(3330183..3330638)
/gene="vpsC"
/locus_tag="SF3233"
/note="outer membrane lipid asymmetry maintenance protein
MlaD; Region: OM_asym_MlaD; TIGR04430"
/db_xref="CDD:275223"
gene complement(3330646..3331428)
/gene="vpsB"
/locus_tag="SF3234"
/db_xref="GeneID:1027117"
CDS complement(3330646..3331428)
/gene="vpsB"
/locus_tag="SF3234"
/note="Code: R; COG: COG0767"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_708993.1"
/db_xref="GeneID:1027117"
/translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
misc_feature complement(3330652..3331410)
/gene="vpsB"
/locus_tag="SF3234"
/note="lipid asymmetry maintenance ABC transporter
permease subunit MlaE; Region: perm_MlaE_1; NF033619"
/db_xref="CDD:411238"
gene complement(3331436..3332245)
/gene="vpsA"
/locus_tag="SF3235"
/db_xref="GeneID:1027119"
CDS complement(3331436..3332245)
/gene="vpsA"
/locus_tag="SF3235"
/note="Code: R; COG: COG1127"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_708994.1"
/db_xref="GeneID:1027119"
/translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
ADKKIVAHGSAQALQTNPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
misc_feature complement(3331439..3332242)
/gene="vpsA"
/locus_tag="SF3235"
/note="phospholipid ABC transporter ATP-binding protein
MlaF; Region: PRK11831"
/db_xref="CDD:236997"
gene 3332455..3333420
/gene="yrbG"
/locus_tag="SF3236"
/db_xref="GeneID:1027075"
CDS 3332455..3333420
/gene="yrbG"
/locus_tag="SF3236"
/note="Code: P; COG: COG0530"
/codon_start=1
/transl_table=11
/product="calcium/sodium:proton antiporter"
/protein_id="NP_708995.1"
/db_xref="GeneID:1027075"
/translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
VSIGTSLPEIIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQGTDSLTREQLA
ELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMALTAIAIGTSL
PELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDYSVML
LVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE"
misc_feature 3332455..3333417
/gene="yrbG"
/locus_tag="SF3236"
/note="putative calcium/sodium:proton antiporter;
Provisional; Region: PRK10734"
/db_xref="CDD:182684"
gene 3333434..3334420
/gene="yrbH"
/locus_tag="SF3237"
/db_xref="GeneID:1027128"
CDS 3333434..3334420
/gene="yrbH"
/locus_tag="SF3237"
/note="Code: M; COG: COG0794"
/codon_start=1
/transl_table=11
/product="D-arabinose 5-phosphate isomerase"
/protein_id="NP_708996.2"
/db_xref="GeneID:1027128"
/translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPSEAAHGDLGMVTPQDVVIA
ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV
MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
misc_feature 3333440..3334417
/gene="yrbH"
/locus_tag="SF3237"
/note="arabinose-5-phosphate isomerase KdsD; Region:
PRK10892"
/db_xref="CDD:182814"
gene 3334441..3335007
/gene="yrbI"
/locus_tag="SF3238"
/db_xref="GeneID:1027121"
CDS 3334441..3335007
/gene="yrbI"
/locus_tag="SF3238"
/note="Code: R; COG: COG1778"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonate 8-phosphate
phosphatase KdsC"
/protein_id="NP_708997.1"
/db_xref="GeneID:1027121"
/translation="MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYM
GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
LIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
GGRGAVREVCDLLLLAQGKLDEAKGQSI"
misc_feature 3334456..3335004
/gene="yrbI"
/locus_tag="SF3238"
/note="3-deoxy-manno-octulosonate-8-phosphatase KdsC;
Region: PRK09484"
/db_xref="CDD:181898"
misc_feature order(3334534..3334548,3334666..3334671,3334744..3334746,
3334810..3334815,3334822..3334827)
/gene="yrbI"
/locus_tag="SF3238"
/note="active site"
/db_xref="CDD:319769"
misc_feature order(3334540..3334542,3334555..3334578,3334582..3334584,
3334588..3334611,3334618..3334620,3334630..3334632,
3334672..3334674,3334681..3334686,3334693..3334698,
3334705..3334707,3334738..3334740,3334813..3334824,
3334828..3334833,3334870..3334872,3334882..3334884,
3334927..3334929,3334939..3334941,3334951..3334953)
/gene="yrbI"
/locus_tag="SF3238"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:319769"
gene 3335004..3335579
/gene="yrbK"
/locus_tag="SF3239"
/db_xref="GeneID:1027116"
CDS 3335004..3335579
/gene="yrbK"
/locus_tag="SF3239"
/note="Code: S; COG: COG3117"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide exporter periplasmic protein
LptC"
/protein_id="NP_708998.1"
/db_xref="GeneID:1027116"
/translation="MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
misc_feature 3335004..3335576
/gene="yrbK"
/locus_tag="SF3239"
/note="LPS export ABC transporter periplasmic protein
LptC; Region: PRK10893"
/db_xref="CDD:236788"
gene 3335548..3336105
/gene="yhbN"
/locus_tag="SF3240"
/db_xref="GeneID:1027131"
CDS 3335548..3336105
/gene="yhbN"
/locus_tag="SF3240"
/note="Code: S; COG: COG1934"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide transport periplasmic protein
LptA"
/protein_id="NP_708999.2"
/db_xref="GeneID:1027131"
/translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
TTVLVPSQLQDKNNKGQTPAQKKGN"
misc_feature 3335560..3336102
/gene="yhbN"
/locus_tag="SF3240"
/note="lipopolysaccharide ABC transporter
substrate-binding protein LptA; Region: PRK10894"
/db_xref="CDD:182816"
gene 3336112..3336837
/gene="yhbG"
/locus_tag="SF3241"
/db_xref="GeneID:1027080"
CDS 3336112..3336837
/gene="yhbG"
/locus_tag="SF3241"
/note="Code: R; COG: COG1137"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_709000.1"
/db_xref="GeneID:1027080"
/translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
GTPTEILQDEHVKRVYLGEDFRL"
misc_feature 3336112..3336834
/gene="yhbG"
/locus_tag="SF3241"
/note="lipopolysaccharide ABC transporter ATP-binding
protein; Provisional; Region: PRK10895"
/db_xref="CDD:182817"
gene 3336885..3338318
/gene="rpoN"
/locus_tag="SF3242"
/db_xref="GeneID:1027124"
CDS 3336885..3338318
/gene="rpoN"
/locus_tag="SF3242"
/note="Code: K; COG: COG1508"
/codon_start=1
/transl_table=11
/product="RNA polymerase factor sigma-54"
/protein_id="NP_709001.1"
/db_xref="GeneID:1027124"
/translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
PLLEQIDTHEEIDTRETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG
DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLED
ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
IMVARRTVAKYRESLSIPPSNQRKQLV"
misc_feature 3336885..3338312
/gene="rpoN"
/locus_tag="SF3242"
/note="RNA polymerase factor sigma-54; Reviewed; Region:
PRK05932"
/db_xref="CDD:235648"
gene 3338341..3338628
/gene="yhbH"
/locus_tag="SF3243"
/db_xref="GeneID:1027091"
CDS 3338341..3338628
/gene="yhbH"
/locus_tag="SF3243"
/note="Code: J; COG: COG1544"
/codon_start=1
/transl_table=11
/product="ribosome hibernation promoting factor HPF"
/protein_id="NP_709002.1"
/db_xref="GeneID:1027091"
/translation="MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVE
KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
misc_feature 3338341..3338625
/gene="yhbH"
/locus_tag="SF3243"
/note="ribosome hibernation promoting factor; Region:
PRK10470"
/db_xref="CDD:182484"
misc_feature order(3338350..3338352,3338356..3338358,3338362..3338364,
3338416..3338418,3338425..3338427,3338443..3338448,
3338458..3338460,3338470..3338472,3338497..3338499,
3338506..3338517,3338524..3338526,3338530..3338532,
3338539..3338541,3338545..3338547,3338554..3338556,
3338596..3338601,3338611..3338613)
/gene="yhbH"
/locus_tag="SF3243"
/note="30S subunit binding site [active]"
/db_xref="CDD:238308"
gene 3338746..3339237
/gene="ptsN"
/locus_tag="SF3244"
/db_xref="GeneID:1027089"
CDS 3338746..3339237
/gene="ptsN"
/locus_tag="SF3244"
/note="Code: GT; COG: COG1762"
/codon_start=1
/transl_table=11
/product="PTS system sugar transporter subunit IIA"
/protein_id="NP_709003.2"
/db_xref="GeneID:1027089"
/translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
DEA"
misc_feature 3338749..3339210
/gene="ptsN"
/locus_tag="SF3244"
/note="PTS IIA-like nitrogen regulatory protein PtsN;
Region: PRK10896"
/db_xref="CDD:182818"
misc_feature order(3338914..3338916,3338962..3338964)
/gene="ptsN"
/locus_tag="SF3244"
/note="active site"
/db_xref="CDD:238129"
misc_feature 3338962..3338964
/gene="ptsN"
/locus_tag="SF3244"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:238129"
gene 3339283..3340137
/gene="yhbJ"
/locus_tag="SF3245"
/db_xref="GeneID:1027086"
CDS 3339283..3340137
/gene="yhbJ"
/locus_tag="SF3245"
/note="Code: R; COG: COG1660"
/codon_start=1
/transl_table=11
/product="glmZ(sRNA)-inactivating NTPase"
/protein_id="NP_709004.1"
/db_xref="GeneID:1027086"
/translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
RTLEKRKP"
misc_feature 3339283..3340128
/gene="yhbJ"
/locus_tag="SF3245"
/note="P-loop ATPase protein family; Region: ATP_bind_2;
pfam03668"
/db_xref="CDD:397641"
gene 3340134..3340406
/gene="ptsO"
/locus_tag="SF3246"
/db_xref="GeneID:1023507"
CDS 3340134..3340406
/gene="ptsO"
/locus_tag="SF3246"
/note="Code: G; COG: COG1925"
/codon_start=1
/transl_table=11
/product="N-regulated PTS system (Npr)
phosphohistidinoprotein-hexose phosphotransferase"
/protein_id="NP_709005.1"
/db_xref="GeneID:1023507"
/translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
misc_feature 3340134..3340403
/gene="ptsO"
/locus_tag="SF3246"
/note="PTS phosphocarrier protein NPr; Region: PRK10897"
/db_xref="CDD:182819"
misc_feature 3340149..3340160
/gene="ptsO"
/locus_tag="SF3246"
/note="dimerization domain swap beta strand [polypeptide
binding]; other site"
/db_xref="CDD:238217"
misc_feature order(3340176..3340178,3340182..3340187,3340191..3340196,
3340206..3340208,3340215..3340217,3340272..3340283,
3340290..3340295)
/gene="ptsO"
/locus_tag="SF3246"
/note="regulatory protein interface [polypeptide binding];
other site"
/db_xref="CDD:238217"
misc_feature 3340179..3340181
/gene="ptsO"
/locus_tag="SF3246"
/note="active site"
/db_xref="CDD:238217"
misc_feature 3340275..3340277
/gene="ptsO"
/locus_tag="SF3246"
/note="regulatory phosphorylation site [posttranslational
modification]; other site"
/db_xref="CDD:238217"
gene 3340619..3341251
/gene="yrbL"
/locus_tag="SF3247"
/db_xref="GeneID:1027097"
CDS 3340619..3341251
/gene="yrbL"
/locus_tag="SF3247"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709006.2"
/db_xref="GeneID:1027097"
/translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR
RELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR
YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLI
PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
misc_feature 3340619..3341248
/gene="yrbL"
/locus_tag="SF3247"
/note="PhoP regulatory network protein YrbL; Region:
PRK10345"
/db_xref="CDD:182395"
misc_feature order(3340646..3340657,3340700..3340702,3340706..3340708,
3340808..3340810,3340868..3340876,3340883..3340885,
3341006..3341008,3341018..3341023,3341027..3341029,
3341069..3341074)
/gene="yrbL"
/locus_tag="SF3247"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:270622"
gene complement(3341248..3341975)
/gene="mtgA"
/locus_tag="SF3248"
/pseudo
/db_xref="GeneID:1027093"
misc_feature complement(3341248..3341975)
/gene="mtgA"
/locus_tag="SF3248"
/note="Similar to Escherichia coli K12 peptidoglycan
enzyme gi: 1789601 (243 aa). BLAST with identity of 99% in
242 aa. This CDS ontains frameshift. The sequence has been
checked and is believed to be correct."
/pseudo
gene complement(3341972..3342625)
/gene="yhbL"
/locus_tag="SF3249"
/db_xref="GeneID:1027090"
CDS complement(3341972..3342625)
/gene="yhbL"
/locus_tag="SF3249"
/note="Code: S; COG: COG3155"
/codon_start=1
/transl_table=11
/product="isoprenoid biosynthesis protein with
amidotransferase-like domain"
/protein_id="NP_709007.2"
/db_xref="GeneID:1027090"
/translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ
QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS
NFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA
EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE"
misc_feature complement(3341975..3342625)
/gene="yhbL"
/locus_tag="SF3249"
/note="isoprenoid biosynthesis glyoxalase ElbB; Region:
PRK11780"
/db_xref="CDD:236980"
misc_feature complement(3342221..3342223)
/gene="yhbL"
/locus_tag="SF3249"
/note="conserved cys residue [active]"
/db_xref="CDD:153227"
gene complement(3342855..3345191)
/gene="arcB"
/locus_tag="SF3250"
/db_xref="GeneID:1027096"
CDS complement(3342855..3345191)
/gene="arcB"
/locus_tag="SF3250"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="aerobic respiration control sensor protein ArcB"
/protein_id="NP_709008.1"
/db_xref="GeneID:1027096"
/translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
misc_feature complement(3342858..3345191)
/gene="arcB"
/locus_tag="SF3250"
/note="aerobic respiration control sensor protein ArcB;
Provisional; Region: PRK11091"
/db_xref="CDD:236842"
gene complement(3345287..3346216)
/gene="yhcC"
/locus_tag="SF3251"
/db_xref="GeneID:1027084"
CDS complement(3345287..3346216)
/gene="yhcC"
/locus_tag="SF3251"
/note="Code: R; COG: COG1242"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709009.2"
/db_xref="GeneID:1027084"
/translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETSVDGIKLHPLHI
VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
ENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE"
misc_feature complement(3345311..3346201)
/gene="yhcC"
/locus_tag="SF3251"
/note="radical SAM protein, TIGR01212 family; Region:
TIGR01212"
/db_xref="CDD:130279"
gene 3346783..3351351
/gene="gltB"
/locus_tag="SF3252"
/db_xref="GeneID:1025892"
CDS 3346783..3351351
/gene="gltB"
/locus_tag="SF3252"
/codon_start=1
/transl_table=11
/product="glutamate synthase"
/protein_id="NP_709010.3"
/db_xref="GeneID:1025892"
/translation="MRGARMTRKPRRHALSVPVRSGSEVGFPQSLGEVHDMLYDKSLE
RDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFF
RIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVPTNEG
VLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEANKDFYVCSLSNL
VNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGE
INTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDII
RAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGL
RPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDD
DLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVI
RVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLA
TSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTT
LEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDQSLRCD
ANIIVETASARDPHHFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRN
GINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQ
DLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAK
LVNERPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAE
AMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGA
KPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKA
MISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVET
QQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHL
NNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDL
LKELDGFTAKQQKLALSKLLETAEPHAGKSLYCTENNPPFDNGLLNAQLLQQAKPFVD
ERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGTAGQSFGVWNAG
GVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGATGGRLYAAG
RAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDES
GDFRKRVNPELVEVLSVDDLAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKFA
LVKPKSSDVKALLGHRSRSAAELRVQAQ"
misc_feature 3346885..3351333
/gene="gltB"
/locus_tag="SF3252"
/note="glutamate synthase subunit alpha; Provisional;
Region: gltB; PRK11750"
/db_xref="CDD:236968"
gene 3351364..3352782
/gene="gltD"
/locus_tag="SF3253"
/db_xref="GeneID:1027115"
CDS 3351364..3352782
/gene="gltD"
/locus_tag="SF3253"
/note="Code: ER; COG: COG0493"
/codon_start=1
/transl_table=11
/product="glutamate synthase"
/protein_id="NP_709011.1"
/db_xref="GeneID:1027115"
/translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQA
DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGE
TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA
DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGNDNAFQTSNPKIFAGGDIVRGSD
LVVTAIAEGRKAADGIMNWLEV"
misc_feature 3351379..3352779
/gene="gltD"
/locus_tag="SF3253"
/note="glutamate synthase small subunit family protein,
proteobacterial; Region: gltD_gamma_fam; TIGR01318"
/db_xref="CDD:273553"
gene 3352966..3353371
/gene="yhcG"
/locus_tag="SF3254"
/pseudo
/db_xref="GeneID:1027099"
misc_feature 3352966..3353371
/gene="yhcG"
/locus_tag="SF3254"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789614 (376 aa). BLAST with
identity of 92% in 135 aa. This CDS has been truncated.
The sequence has been checked and is believed to be
correct."
/pseudo
mobile_element 3353455..3354718
/mobile_element_type="insertion sequence:IS600"
gene 3353519..3353821
/locus_tag="SF3255"
/db_xref="GeneID:1025136"
CDS 3353519..3353821
/locus_tag="SF3255"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 transposase"
/protein_id="NP_709012.1"
/db_xref="GeneID:1025136"
/translation="MSRKTQRYSKEFKAEAVRTVLENQLSISEDASRLFLPEGTLGQW
VTAARKGLGTPGSRTLAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR"
misc_feature 3353519..3353791
/locus_tag="SF3255"
/note="Transposase InsE and inactivated derivatives
[Mobilome: prophages, transposons]; Region: InsE; COG2963"
/db_xref="CDD:442203"
gene 3353857..3354675
/locus_tag="SF3256"
/db_xref="GeneID:1027105"
CDS 3353857..3354675
/locus_tag="SF3256"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="insertion sequence element IS600 protein"
/protein_id="NP_709013.1"
/db_xref="GeneID:1027105"
/translation="MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET
YGTRRLQTELAENGIIVGRDRLACLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQ
TFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTL
KNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHFRLGNISPAAFREKYHQMAA"
misc_feature <3353857..3354648
/locus_tag="SF3256"
/note="IS3 family transposase; Region: transpos_IS3;
NF033516"
/db_xref="CDD:468052"
gene 3354728..3355033
/locus_tag="SF3256a"
/db_xref="GeneID:16608361"
CDS 3354728..3355033
/locus_tag="SF3256a"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_008439286.1"
/db_xref="GeneID:16608361"
/translation="MIYIEQLELIHKSGDVLYPVKITRKSSGKTAFHLVPFGLNKTHD
LLEVEDASEAIRLVIDERHSIRCSTLTATITNKKGKRIKRTGIYSIKGVNIKEYNVR"
gene complement(3355109..3355573)
/gene="yhcH"
/locus_tag="SF3257"
/db_xref="GeneID:1025128"
CDS complement(3355109..3355573)
/gene="yhcH"
/locus_tag="SF3257"
/note="Code: S; COG: COG2731"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709014.1"
/db_xref="GeneID:1025128"
/translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
LCSAIENEQTIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA"
misc_feature complement(3355151..3355573)
/gene="yhcH"
/locus_tag="SF3257"
/note="N-acetylneuraminate anomerase; Region:
acetylneur_anom; NF040884"
/db_xref="CDD:468820"
gene complement(3355570..3356478)
/gene="yhcI"
/locus_tag="SF3258"
/db_xref="GeneID:1026854"
CDS complement(3355570..3356478)
/gene="yhcI"
/locus_tag="SF3258"
/note="Code: K; COG: COG1940"
/codon_start=1
/transl_table=11
/product="NagC-like transcriptional regulator"
/protein_id="NP_709015.4"
/db_xref="GeneID:1026854"
/translation="MVQHSDEKGGAMTILAIDIGGTKLAAALIGADGQIRDRRELPTP
ASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKT
LEQLTNLPTIAINDAQAAAWAEYQALEGDITDMVFITVSTGVGGGVVSGGKLLTGPGG
LAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADARTIFTRAGQGD
EQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVEMYLAQEPAAFH
VDLLAAHYRHDAGLLGAALLAQGEKL"
misc_feature complement(3355618..3356445)
/gene="yhcI"
/locus_tag="SF3258"
/note="N-acetylmannosamine kinase; Provisional; Region:
PRK05082"
/db_xref="CDD:235338"
gene complement(3356442..3357131)
/gene="yhcJ"
/locus_tag="SF3259"
/db_xref="GeneID:1027094"
CDS complement(3356442..3357131)
/gene="yhcJ"
/locus_tag="SF3259"
/note="Code: G; COG: COG3010"
/codon_start=1
/transl_table=11
/product="N-acetylmannosamine-6-phosphate 2-epimerase"
/protein_id="NP_709016.2"
/db_xref="GeneID:1027094"
/translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
ETPEEPDLALVKTLSEAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ
WYNTAMKKAVL"
misc_feature complement(3356454..3357101)
/gene="yhcJ"
/locus_tag="SF3259"
/note="putative N-acetylmannosamine-6-phosphate
2-epimerase; Region: PRK01130"
/db_xref="CDD:234907"
misc_feature complement(order(3356511..3356513,3356574..3356582,
3356661..3356663,3356673..3356675,3356736..3356738,
3356817..3356819,3356910..3356912,3356916..3356918,
3356979..3356981,3357066..3357068,3357072..3357074))
/gene="yhcJ"
/locus_tag="SF3259"
/note="putative active site cavity [active]"
/db_xref="CDD:240080"
gene complement(3357179..3358699)
/gene="nanT"
/locus_tag="SF3260"
/db_xref="GeneID:1027083"
CDS complement(3357179..3358699)
/gene="nanT"
/locus_tag="SF3260"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="sialic acid transporter"
/protein_id="NP_709017.3"
/db_xref="GeneID:1027083"
/translation="MGIAHRGRLTMSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGF
DFVLIALVLTEVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSI
VLFSAGTLACGFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLI
SGFSVGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKA
PVRTMVDILYRGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFM
VQSTGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGA
AVGCCVGGFLGDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQG
IAGILPKLIGGYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSF
SLTFVVILLIGLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS"
misc_feature complement(3357182..3358669)
/gene="nanT"
/locus_tag="SF3260"
/note="putative sialic acid transporter; Provisional;
Region: PRK03893"
/db_xref="CDD:179668"
gene complement(3358779..3359672)
/gene="nanA"
/locus_tag="SF3261"
/db_xref="GeneID:1027061"
CDS complement(3358779..3359672)
/gene="nanA"
/locus_tag="SF3261"
/note="Code: EM; COG: COG0329"
/codon_start=1
/transl_table=11
/product="N-acetylneuraminate lyase"
/protein_id="NP_709018.1"
/db_xref="GeneID:1027061"
/translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
VDEKYLPELKALAQQLMQERG"
misc_feature complement(3358782..3359660)
/gene="nanA"
/locus_tag="SF3261"
/note="N-acetylneuraminate lyase; Region: nanA; TIGR00683"
/db_xref="CDD:273217"
misc_feature complement(order(3359178..3359180,3359262..3359264,
3359529..3359537,3359544..3359546,3359640..3359642))
/gene="nanA"
/locus_tag="SF3261"
/note="inhibitor site; inhibition site"
/db_xref="CDD:188641"
misc_feature complement(order(3359055..3359057,3359178..3359180,
3359262..3359264,3359529..3359537,3359544..3359546))
/gene="nanA"
/locus_tag="SF3261"
/note="active site"
/db_xref="CDD:188641"
misc_feature complement(order(3358854..3358859,3359310..3359312,
3359322..3359324,3359343..3359348,3359418..3359423,
3359514..3359519,3359532..3359534))
/gene="nanA"
/locus_tag="SF3261"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:188641"
misc_feature complement(3359178..3359180)
/gene="nanA"
/locus_tag="SF3261"
/note="catalytic residue [active]"
/db_xref="CDD:188641"
gene complement(3359794..3360576)
/gene="yhcK"
/locus_tag="SF3262"
/db_xref="GeneID:1027098"
CDS complement(3359794..3360576)
/gene="yhcK"
/locus_tag="SF3262"
/note="Code: K; COG: COG2186"
/codon_start=1
/transl_table=11
/product="transcriptional regulator NanR"
/protein_id="NP_709019.2"
/db_xref="GeneID:1027098"
/translation="MNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRR
EFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIG
ELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLD
NNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVSYQQ
HIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
misc_feature complement(3359806..3360531)
/gene="yhcK"
/locus_tag="SF3262"
/note="transcriptional regulator NanR; Provisional;
Region: PRK03837"
/db_xref="CDD:235166"
mobile_element 3360968..3361735
/mobile_element_type="insertion sequence:IS1"
gene 3361023..3361298
/gene="insA"
/locus_tag="SF3263"
/db_xref="GeneID:1027060"
CDS 3361023..3361298
/gene="insA"
/locus_tag="SF3263"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_709020.1"
/db_xref="GeneID:1027060"
/translation="MAFISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSARSR"
misc_feature 3361044..>3361295
/gene="insA"
/locus_tag="SF3263"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3361325..3361720
/gene="insB"
/locus_tag="SF3264"
/db_xref="GeneID:1027087"
CDS 3361325..3361720
/gene="insB"
/locus_tag="SF3264"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_709021.1"
/db_xref="GeneID:1027087"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature 3361328..3361717
/gene="insB"
/locus_tag="SF3264"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(3361714..3362142)
/locus_tag="SF3265"
/db_xref="GeneID:1027051"
CDS complement(3361714..3362142)
/locus_tag="SF3265"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709022.1"
/db_xref="GeneID:1027051"
/translation="MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTL
KSPSYTKSISWQHYLRLIPYNWTITLEVNYTFYEISGINYSHGKYIMYKSLFTIIILL
YSASSYAKSESPPASTITFIAQIDHVELNKTALSVMTPTY"
mobile_element 3361968..3362735
/mobile_element_type="insertion sequence:IS1"
gene 3362217..3362720
/gene="insB"
/locus_tag="SF3266"
/db_xref="GeneID:1027100"
CDS 3362217..3362720
/gene="insB"
/locus_tag="SF3266"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_709023.1"
/db_xref="GeneID:1027100"
/translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature 3362325..3362717
/gene="insB"
/locus_tag="SF3266"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 3362741..3364108
/gene="yhcL"
/locus_tag="SF3267"
/db_xref="GeneID:1027101"
CDS 3362741..3364108
/gene="yhcL"
/locus_tag="SF3267"
/note="Code: C; COG: COG3069"
/codon_start=1
/transl_table=11
/product="cryptic C4-dicarboxylate transporter DcuD"
/protein_id="NP_709024.1"
/db_xref="GeneID:1027101"
/translation="MFGIIISVIVLITMGYLILKNYKPQVVLAAAGVFLMMCGVWLGF
GGVLDPAKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASCAMVSL
LSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAV
AVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRA
FDKKDKNINHEQAEQKTLDNVPPLYYAILPVMPLILMLGSLFLAHVGLMKSELHLVVV
MLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFVNVVTLVVAGEIFAKGLTTIG
TVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVP
AVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIAT
ITLFY"
misc_feature 3362741..3364105
/gene="yhcL"
/locus_tag="SF3267"
/note="C4-dicarboxylate transporter DcuC; Region:
PRK09804"
/db_xref="CDD:182087"
gene complement(3364151..3364648)
/gene="sspB"
/locus_tag="SF3268"
/db_xref="GeneID:1027107"
CDS complement(3364151..3364648)
/gene="sspB"
/locus_tag="SF3268"
/note="Code: R; COG: COG2969"
/codon_start=1
/transl_table=11
/product="ClpXP protease specificity-enhancing factor"
/protein_id="NP_709025.1"
/db_xref="GeneID:1027107"
/translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPLLVVDVTLPGVQVPME
YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA
LRVVK"
misc_feature complement(3364271..3364639)
/gene="sspB"
/locus_tag="SF3268"
/note="ClpXP protease specificity-enhancing factor;
Provisional; Region: PRK11798"
/db_xref="CDD:236987"
gene complement(3364654..3365292)
/gene="sspA"
/locus_tag="SF3269"
/db_xref="GeneID:1026855"
CDS complement(3364654..3365292)
/gene="sspA"
/locus_tag="SF3269"
/note="Code: O; COG: COG0625"
/codon_start=1
/transl_table=11
/product="stringent starvation protein A"
/protein_id="NP_709026.1"
/db_xref="GeneID:1026855"
/translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
misc_feature complement(3364660..3365292)
/gene="sspA"
/locus_tag="SF3269"
/note="stringent starvation protein A; Provisional;
Region: sspA; PRK09481"
/db_xref="CDD:236537"
gene complement(3365687..3366079)
/gene="rpsI"
/locus_tag="SF3270"
/db_xref="GeneID:1027073"
CDS complement(3365687..3366079)
/gene="rpsI"
/locus_tag="SF3270"
/note="Code: J; COG: COG0103"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S9"
/protein_id="NP_709027.1"
/db_xref="GeneID:1027073"
/translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
RMVVRQPMELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
FVTRDARQVERKKVGLRKARRRPQFSKR"
misc_feature complement(3365690..3366079)
/gene="rpsI"
/locus_tag="SF3270"
/note="30S ribosomal protein S9; Reviewed; Region: rpsI;
PRK00132"
/db_xref="CDD:178888"
gene complement(3366095..3366523)
/gene="rplM"
/locus_tag="SF3271"
/db_xref="GeneID:1027104"
CDS complement(3366095..3366523)
/gene="rplM"
/locus_tag="SF3271"
/note="Code: J; COG: COG0102"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L13"
/protein_id="NP_709028.2"
/db_xref="GeneID:1027104"
/translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
TPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
misc_feature complement(3366098..3366511)
/gene="rplM"
/locus_tag="SF3271"
/note="Ribosomal protein L13 [Translation, ribosomal
structure and biogenesis]; Region: RplM; COG0102"
/db_xref="CDD:439872"
gene complement(3366742..3367869)
/gene="yhcM"
/locus_tag="SF3272"
/db_xref="GeneID:1027102"
CDS complement(3366742..3367869)
/gene="yhcM"
/locus_tag="SF3272"
/note="Code: R; COG: COG1485"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709029.1"
/db_xref="GeneID:1027102"
/translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSRP
PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
KALFTRGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
TQAHLWLSPLNDETRAQMDKLWLALAGVKRENSPTLEINHRPLATMGVENQTLAVSFT
TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
AEVPLYEIYQGERLKFEFQRCLSRLQEMQSEEYLKREHLAG"
misc_feature complement(3366748..3367866)
/gene="yhcM"
/locus_tag="SF3272"
/note="Cell division protein ZapE (Z ring-associated
ATPase), AFG1 superfamily [Cell cycle control, cell
division, chromosome partitioning]; Region: ZapE; COG1485"
/db_xref="CDD:441094"
gene 3368063..3368461
/gene="yhcB"
/locus_tag="SF3273"
/db_xref="GeneID:1027071"
CDS 3368063..3368461
/gene="yhcB"
/locus_tag="SF3273"
/note="Code: S; COG: COG3105"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709030.2"
/db_xref="GeneID:1027071"
/translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
EASNDQAPVQVPRDYSEGASGLLRTGAKRD"
misc_feature 3368063..3368458
/gene="yhcB"
/locus_tag="SF3273"
/note="DUF1043 family protein; Region: PRK11677"
/db_xref="CDD:236953"
gene 3368615..3369772
/locus_tag="SF3274"
/pseudogene="unknown"
/db_xref="GeneID:1027103"
gene 3370052..3371119
/gene="degS"
/locus_tag="SF3275"
/db_xref="GeneID:1027067"
CDS 3370052..3371119
/gene="degS"
/locus_tag="SF3275"
/note="Code: O; COG: COG0265"
/codon_start=1
/transl_table=11
/product="serine endoprotease"
/protein_id="NP_709032.1"
/db_xref="GeneID:1027067"
/translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGI
DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
VMRDDKQLTLQVTIQEYPATN"
misc_feature 3370052..3371113
/gene="degS"
/locus_tag="SF3275"
/note="serine endoprotease DegS; Region: PRK10898"
/db_xref="CDD:182820"
gene complement(3371181..3372119)
/gene="mdh"
/locus_tag="SF3276"
/db_xref="GeneID:1025382"
CDS complement(3371181..3372119)
/gene="mdh"
/locus_tag="SF3276"
/note="Code: C; COG: COG0039"
/codon_start=1
/transl_table=11
/product="malate dehydrogenase"
/protein_id="NP_709033.2"
/db_xref="GeneID:1025382"
/translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
QQVAKNCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA
GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
ERKSIGTLSAFEQNALEGMLDTLKKDIALGKEFVNK"
misc_feature complement(3371190..3372119)
/gene="mdh"
/locus_tag="SF3276"
/note="Glyoxysomal and mitochondrial malate
dehydrogenases; Region: MDH_glyoxysomal_mitochondrial;
cd01337"
/db_xref="CDD:133422"
misc_feature complement(order(3371439..3371441,3371451..3371453,
3371589..3371591,3371673..3371675,3371682..3371684,
3371763..3371765,3371769..3371771,3371829..3371831,
3371838..3371840,3371850..3371852,3371883..3371888,
3371892..3371894,3372018..3372020,3372084..3372095))
/gene="mdh"
/locus_tag="SF3276"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:133422"
misc_feature complement(order(3371433..3371435,3371442..3371453,
3371469..3371474,3371484..3371486,3371493..3371495,
3371652..3371654,3371661..3371666,3371973..3371981,
3371985..3371990,3372078..3372080))
/gene="mdh"
/locus_tag="SF3276"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:133422"
misc_feature complement(order(3371490..3371492,3371589..3371591,
3371661..3371663,3371763..3371765,3371859..3371861,
3371877..3371879))
/gene="mdh"
/locus_tag="SF3276"
/note="Substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133422"
gene 3372554..3373024
/gene="argR"
/locus_tag="SF3277"
/db_xref="GeneID:1027085"
CDS 3372554..3373024
/gene="argR"
/locus_tag="SF3277"
/note="Code: E; COG: COG1438"
/codon_start=1
/transl_table=11
/product="arginine repressor ArgR"
/protein_id="NP_709034.1"
/db_xref="GeneID:1027085"
/translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
misc_feature 3372554..3373021
/gene="argR"
/locus_tag="SF3277"
/note="transcriptional regulator ArgR; Region: PRK05066"
/db_xref="CDD:179922"
gene 3373338..3373652
/gene="yhcN"
/locus_tag="SF3278"
/db_xref="GeneID:1027063"
CDS 3373338..3373652
/gene="yhcN"
/locus_tag="SF3278"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709035.1"
/db_xref="GeneID:1027063"
/translation="MGHETKAQLKDYVEVKIMKIKTTVAALSVLSVLSFGAFAADSID
AAQAQNREAIGTVSVSGVASSPMDIREMLNKKAEEKGATAYQITEARSGDTWHATAEL
YK"
misc_feature 3373389..3373649
/gene="yhcN"
/locus_tag="SF3278"
/note="peroxide/acid stress response protein YhcN; Region:
stress_YhcN; NF033776"
/db_xref="CDD:411360"
gene complement(3373708..3373980)
/gene="yhcO"
/locus_tag="SF3279"
/db_xref="GeneID:1027064"
CDS complement(3373708..3373980)
/gene="yhcO"
/locus_tag="SF3279"
/note="Code: K; COG: COG2732"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709036.1"
/db_xref="GeneID:1027064"
/translation="MNIYAFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN
DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH"
misc_feature complement(3373717..3373974)
/gene="yhcO"
/locus_tag="SF3279"
/note="Barstar is an intracellular inhibitor of barnase,
an extracellular ribonuclease of Bacillus
amyloliquefaciens. Barstar binds tightly to the barnase
active site and sterically blocks it thus inhibiting its
potentially lethal RNase activity inside the cell; Region:
Barstar; cd05142"
/db_xref="CDD:240165"
misc_feature complement(order(3373750..3373752,3373861..3373863,
3373873..3373881,3373885..3373887,3373891..3373893))
/gene="yhcO"
/locus_tag="SF3279"
/note="RNAase interaction site [polypeptide binding];
other site"
/db_xref="CDD:240165"
gene complement(3374072..3376039)
/gene="yhcP"
/locus_tag="SF3280"
/db_xref="GeneID:1027078"
CDS complement(3374072..3376039)
/gene="yhcP"
/locus_tag="SF3280"
/note="Code: S; COG: COG1289"
/codon_start=1
/transl_table=11
/product="p-hydroxybenzoic acid efflux subunit AaeB"
/protein_id="NP_709037.1"
/db_xref="GeneID:1027078"
/translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
IMADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQ
GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT
PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
VQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
DRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
misc_feature complement(3374078..3376033)
/gene="yhcP"
/locus_tag="SF3280"
/note="p-hydroxybenzoic acid efflux subunit AaeB;
Provisional; Region: PRK10631"
/db_xref="CDD:182600"
gene complement(3376045..3376977)
/gene="yhcQ"
/locus_tag="SF3281"
/db_xref="GeneID:1027077"
CDS complement(3376045..3376977)
/gene="yhcQ"
/locus_tag="SF3281"
/note="Code: Q; COG: COG1566"
/codon_start=1
/transl_table=11
/product="p-hydroxybenzoic acid efflux subunit AaeA"
/protein_id="NP_709038.1"
/db_xref="GeneID:1027077"
/translation="MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFS
ADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQ
EKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAP
ADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGS
NKVLKGTVDSVAAGVTNASSTRDDKGMATIDSDLEWVRLAQRVPVRIRLDNQQENIWP
AGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG"
misc_feature complement(3376048..3376977)
/gene="yhcQ"
/locus_tag="SF3281"
/note="p-hydroxybenzoic acid efflux pump subunit AaeA;
Region: PRK10559"
/db_xref="CDD:182548"
gene complement(3376985..3377257)
/locus_tag="SF3281a"
/db_xref="GeneID:16608362"
CDS complement(3376985..3377257)
/locus_tag="SF3281a"
/codon_start=1
/transl_table=11
/product="efflux system membrane protein"
/protein_id="YP_008439287.1"
/db_xref="GeneID:16608362"
/translation="MPFSAATDAENNNACSLYTTKVNMSLFPVIVVFGLSFPPIFFEL
LLSLAIFWLVRRVLVPTGIYDFVWHPALFNTALYCCLFYLISRLFV"
misc_feature complement(3376988..3377188)
/locus_tag="SF3281a"
/note="efflux system membrane protein; Provisional;
Region: PRK11594"
/db_xref="CDD:183220"
gene 3377389..3378300
/gene="yhcS"
/locus_tag="SF3282"
/db_xref="GeneID:1027040"
CDS 3377389..3378300
/gene="yhcS"
/locus_tag="SF3282"
/note="Code: K; COG: COG0583"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="NP_709039.2"
/db_xref="GeneID:1027040"
/translation="MSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLN
RSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLA
GLTAKMLKEYPGLSANLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVC
AAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPM
TLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQ
VVINSLTDYFVEVGKLFQEMHGRGKEK"
misc_feature 3377389..3378297
/gene="yhcS"
/locus_tag="SF3282"
/note="HTH-type transcriptional activator AaeR; Region:
PRK10632"
/db_xref="CDD:182601"
gene complement(3378428..3379873)
/gene="tldD"
/locus_tag="SF3283"
/db_xref="GeneID:1027079"
CDS complement(3378428..3379873)
/gene="tldD"
/locus_tag="SF3283"
/note="Code: R; COG: COG0312"
/codon_start=1
/transl_table=11
/product="protease TldD"
/protein_id="NP_709040.1"
/db_xref="GeneID:1027079"
/translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
SGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS
GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD
GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
GGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNG
VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
misc_feature complement(3378431..3379873)
/gene="tldD"
/locus_tag="SF3283"
/note="protease TldD; Provisional; Region: tldD; PRK10735"
/db_xref="CDD:182685"
gene complement(3380029..3383829)
/gene="yhdP"
/locus_tag="SF3284"
/db_xref="GeneID:1026858"
CDS complement(3380029..3383829)
/gene="yhdP"
/locus_tag="SF3284"
/experiment="mass spectrum study"
/note="Code: S; COG: COG3164"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709041.3"
/db_xref="GeneID:1026858"
/translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLNAWRPEILNKI
ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR
WQFRDLTFWQLRFRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ
ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD
GQATISWLNNDKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
NAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLI
DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
TLRNNSLFIKPLDSILKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
VAVNLNGNWQPAKTGVLPEAVNEALSGSVAWDGKVGIDLPYHAGATYNVELNGDLNNV
SSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIW
AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS
LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
GDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISGDTLTLTNGLI
DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
EKAQ"
misc_feature complement(3382531..3383829)
/gene="yhdP"
/locus_tag="SF3284"
/note="Uncharacterized conserved protein AsmA involved in
outer membrane biogenesis [Cell wall/membrane/envelope
biogenesis]; Region: AsmA; COG2982"
/db_xref="CDD:442221"
misc_feature complement(3380032..3383097)
/gene="yhdP"
/locus_tag="SF3284"
/note="AsmA2 domain-containing protein; Region: PRK10899"
/db_xref="CDD:236789"
gene complement(3383897..3385366)
/gene="cafA"
/locus_tag="SF3285"
/db_xref="GeneID:1025290"
CDS complement(3383897..3385366)
/gene="cafA"
/locus_tag="SF3285"
/note="Code: J; COG: COG1530"
/codon_start=1
/transl_table=11
/product="ribonuclease G"
/protein_id="NP_709042.2"
/db_xref="GeneID:1025290"
/translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
misc_feature complement(3383900..3385366)
/gene="cafA"
/locus_tag="SF3285"
/note="ribonuclease G; Provisional; Region: PRK11712"
/db_xref="CDD:183285"
gene complement(3385356..3385949)
/gene="maf"
/locus_tag="SF3286"
/db_xref="GeneID:1027066"
CDS complement(3385356..3385949)
/gene="maf"
/locus_tag="SF3286"
/note="Code: D; COG: COG0424"
/codon_start=1
/transl_table=11
/product="Maf-like protein"
/protein_id="NP_709043.1"
/db_xref="GeneID:1027066"
/translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
VVRLAREKAQAGVAQTAQDLPVLGADIIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
VMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
misc_feature complement(3385395..3385940)
/gene="maf"
/locus_tag="SF3286"
/note="7-methyl-GTP pyrophosphatase and related NTP
pyrophosphatases, Maf/HAM1 superfamily [Secondary
metabolites biosynthesis, transport and catabolism];
Region: Maf; COG0424"
/db_xref="CDD:440193"
gene complement(3385958..3386446)
/gene="mreD"
/locus_tag="SF3287"
/db_xref="GeneID:1027059"
CDS complement(3385958..3386446)
/gene="mreD"
/locus_tag="SF3287"
/note="Code: M; COG: COG2891"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreD"
/protein_id="NP_709044.1"
/db_xref="GeneID:1027059"
/translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
YWILALPHRVNVGTGFVMGAILDLISGSMLGVRVLAMSIIAYLVALKYQLFRNLALWQ
QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
VQ"
misc_feature complement(3385961..3386446)
/gene="mreD"
/locus_tag="SF3287"
/note="rod shape-determining protein MreD; Provisional;
Region: PRK11060"
/db_xref="CDD:182936"
gene complement(3386446..3387549)
/gene="mreC"
/locus_tag="SF3288"
/db_xref="GeneID:1027037"
CDS complement(3386446..3387549)
/gene="mreC"
/locus_tag="SF3288"
/note="Code: M; COG: COG1792"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreC"
/protein_id="NP_709045.1"
/db_xref="GeneID:1027037"
/translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
AVSPFYFVSNAPRELLDGISQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPATGNAATA
PVAPTQPAANRSPQRATPPQSGAQPPARAPGGQ"
misc_feature complement(3386698..3387537)
/gene="mreC"
/locus_tag="SF3288"
/note="rod shape-determining protein MreC; Region: mreC;
TIGR00219"
/db_xref="CDD:129323"
misc_feature complement(<3386455..>3386703)
/gene="mreC"
/locus_tag="SF3288"
/note="pneumococcal surface protein PspC, choline-binding
form; Region: PspC_subgroup_1; NF033838"
/db_xref="CDD:468201"
gene complement(3387615..3388718)
/gene="mreB"
/locus_tag="SF3289"
/db_xref="GeneID:1026494"
CDS complement(3387615..3388718)
/gene="mreB"
/locus_tag="SF3289"
/note="Code: D; COG: COG1077"
/codon_start=1
/transl_table=11
/product="rod shape-determining protein MreB"
/protein_id="NP_709046.4"
/db_xref="GeneID:1026494"
/translation="MVGKVSGFSFPPQLSGLSLSMLKKFRGMFSNDLSIDLGTANTLI
YVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIA
DFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFL
IEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAI
INYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEI
LEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIP
VVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE"
misc_feature complement(3387624..3388643)
/gene="mreB"
/locus_tag="SF3289"
/note="rod shape-determining protein MreB; Provisional;
Region: PRK13927"
/db_xref="CDD:237562"
gene complement(3388963..3390903)
/gene="yhdA"
/locus_tag="SF3290"
/db_xref="GeneID:1027034"
CDS complement(3388963..3390903)
/gene="yhdA"
/locus_tag="SF3290"
/codon_start=1
/transl_table=11
/product="regulatory protein CsrD"
/protein_id="NP_709047.1"
/db_xref="GeneID:1027034"
/translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA
VATAIDTHLVSNDFSALRPQITELMVSADIVRVDLLHGDKQVYTLARNGSYRPVGTSD
LFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIILMLFLAVRWLQR
QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT
LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS
QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIASQLIKAVDT
LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK
GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS
QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL
KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTHVYATGVRSRSEWQTLIQRGVTGGQG
DFFASSQPLDTNVKKYSQRYSV"
misc_feature complement(3389002..3390903)
/gene="yhdA"
/locus_tag="SF3290"
/note="regulatory protein CsrD; Provisional; Region:
PRK11059"
/db_xref="CDD:236833"
gene 3391055..3392029
/gene="yhdH"
/locus_tag="SF3291"
/db_xref="GeneID:1027076"
CDS 3391055..3392029
/gene="yhdH"
/locus_tag="SF3291"
/note="Code: CR; COG: COG0604"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="NP_709048.1"
/db_xref="GeneID:1027076"
/translation="MQALLLEQQDGKTLASVQTLDERRLPEGDVTVDVHWSSLNYKDA
LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
RVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
STAVALLHKLGYQVVAVSGRESTHEYLKSLGASGILPRDEFAESRPLEKQVWAGAIDT
VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
misc_feature 3391055..3392023
/gene="yhdH"
/locus_tag="SF3291"
/note="Yhdh putative quinone oxidoreductases; Region:
MDR_yhdh; cd08288"
/db_xref="CDD:176248"
misc_feature order(3391172..3391177,3391430..3391435,3391442..3391444,
3391514..3391516,3391520..3391531,3391586..3391594,
3391646..3391648,3391706..3391711,3391772..3391786,
3391847..3391858,3391982..3391984,3391991..3391993,
3391997..3391999)
/gene="yhdH"
/locus_tag="SF3291"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:176248"
misc_feature order(3391670..3391672,3391751..3391753,3391769..3391780,
3391796..3391798,3391802..3391813,3391817..3391825,
3391829..3391852,3391859..3391864)
/gene="yhdH"
/locus_tag="SF3291"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:176248"
gene 3392227..3392602
/locus_tag="SF3292"
/pseudogene="unknown"
/db_xref="GeneID:1023662"
gene 3393007..3393477
/gene="accB"
/locus_tag="SF3293"
/db_xref="GeneID:1027068"
CDS 3393007..3393477
/gene="accB"
/locus_tag="SF3293"
/note="Code: I; COG: COG0511"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase biotin carboxyl carrier
protein subunit"
/protein_id="NP_709050.1"
/db_xref="GeneID:1027068"
/translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
misc_feature 3393007..3393474
/gene="accB"
/locus_tag="SF3293"
/note="acetyl-CoA carboxylase, biotin carboxyl carrier
protein; Region: BCCP; TIGR00531"
/db_xref="CDD:273123"
gene 3393488..3394837
/gene="accC"
/locus_tag="SF3294"
/db_xref="GeneID:1027070"
CDS 3393488..3394837
/gene="accC"
/locus_tag="SF3294"
/note="Code: I; COG: COG0439"
/codon_start=1
/transl_table=11
/product="acetyl-CoA carboxylase biotin carboxylase
subunit"
/protein_id="NP_709051.2"
/db_xref="GeneID:1027070"
/translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSTDRDLKHVLL
ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
SGGGGCRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG
QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
misc_feature 3393488..3394834
/gene="accC"
/locus_tag="SF3294"
/note="acetyl-CoA carboxylase biotin carboxylase subunit;
Validated; Region: PRK08591"
/db_xref="CDD:236307"
gene 3394946..3395188
/gene="yhdT"
/locus_tag="SF3295"
/db_xref="GeneID:1027082"
CDS 3394946..3395188
/gene="yhdT"
/locus_tag="SF3295"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709052.1"
/db_xref="GeneID:1027082"
/translation="MDTRFVQAHKEARWALGLTLLYLAVWLVDAYLPGVAPGFTGFPR
WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
misc_feature 3394946..3395185
/gene="yhdT"
/locus_tag="SF3295"
/note="hypothetical protein; Provisional; Region:
PRK10633"
/db_xref="CDD:182602"
gene 3395178..3396629
/gene="panF"
/locus_tag="SF3296"
/db_xref="GeneID:1027054"
CDS 3395178..3396629
/gene="panF"
/locus_tag="SF3296"
/note="Code: EHR; COG: COG0591"
/codon_start=1
/transl_table=11
/product="sodium/panthothenate symporter"
/protein_id="NP_709053.2"
/db_xref="GeneID:1027054"
/translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQ
TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
TIIVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH
PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK"
misc_feature 3395178..3396611
/gene="panF"
/locus_tag="SF3296"
/note="Na+/panthothenate symporter [Coenzyme transport and
metabolism]; Region: PanF; COG4145"
/db_xref="CDD:443316"
gene 3396641..3397522
/gene="prmA"
/locus_tag="SF3297"
/db_xref="GeneID:1027044"
CDS 3396641..3397522
/gene="prmA"
/locus_tag="SF3297"
/note="Code: J; COG: COG2264"
/codon_start=1
/transl_table=11
/product="ribosomal protein L11 methyltransferase"
/protein_id="NP_709054.1"
/db_xref="GeneID:1027044"
/translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL
DPVVEKEEWCRITGRKN"
misc_feature 3396647..3397498
/gene="prmA"
/locus_tag="SF3297"
/note="ribosomal protein L11 methyltransferase; Region:
prmA; TIGR00406"
/db_xref="CDD:273061"
gene 3397974..3398816
/gene="yhdG"
/locus_tag="SF3298"
/db_xref="GeneID:1023434"
CDS 3397974..3398816
/gene="yhdG"
/locus_tag="SF3298"
/note="Code: R; COG: COG0042"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="NP_709055.2"
/db_xref="GeneID:1023434"
/translation="MSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSAPKEMADAARI
NVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTG
WAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANG
DITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLL
CAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYF
ENFA"
misc_feature 3397974..3398813
/gene="yhdG"
/locus_tag="SF3298"
/note="A large family of domains similar to triose
phosphate isomerase (TIM) which, in general, share an
eight beta/alpha closed barrel structure; Region: TIM-like
beta/alpha barrel domains; cl21457"
/db_xref="CDD:473867"
misc_feature order(3398058..3398060,3398148..3398153,3398265..3398267,
3398271..3398273,3398352..3398357,3398361..3398366,
3398451..3398456,3398523..3398525)
/gene="yhdG"
/locus_tag="SF3298"
/note="active site"
/db_xref="CDD:239200"
misc_feature order(3398148..3398150,3398271..3398273,3398355..3398357,
3398361..3398363)
/gene="yhdG"
/locus_tag="SF3298"
/note="catalytic residues [active]"
/db_xref="CDD:239200"
misc_feature order(3398151..3398153,3398265..3398267,3398352..3398354,
3398364..3398366,3398451..3398456)
/gene="yhdG"
/locus_tag="SF3298"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:239200"
gene 3398842..3399138
/gene="fis"
/locus_tag="SF3299"
/db_xref="GeneID:1027065"
CDS 3398842..3399138
/gene="fis"
/locus_tag="SF3299"
/note="Code: KL; COG: COG2901"
/codon_start=1
/transl_table=11
/product="Fis family transcriptional regulator"
/protein_id="NP_709056.1"
/db_xref="GeneID:1027065"
/translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
misc_feature 3398851..3399135
/gene="fis"
/locus_tag="SF3299"
/note="DNA-binding transcriptional regulator Fis; Region:
fis; PRK00430"
/db_xref="CDD:179020"
gene 3399224..3400108
/gene="yhdJ"
/locus_tag="SF3300"
/db_xref="GeneID:1025283"
CDS 3399224..3400108
/gene="yhdJ"
/locus_tag="SF3300"
/note="Code: L; COG: COG0863"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="NP_709057.2"
/db_xref="GeneID:1025283"
/translation="MRTGCEPTRFGNEAKTIIHGDAFAELKKLPTESVDLLFADPPYN
IGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF
TIKSRIVWSYDSSGVQAKKHYGSMYEPILMMVKDAKNYTFNGDAILVEAKTGSQRALI
DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPKALLKRIILASSNPGDIV
LDPFAGSFTTGAVAIASGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG
NLSKRSRLSEVDPDLIAK"
misc_feature 3399242..3400093
/gene="yhdJ"
/locus_tag="SF3300"
/note="adenine-specific DNA-methyltransferase; Region:
PRK11524"
/db_xref="CDD:183177"
gene 3400165..3400392
/gene="yhdU"
/locus_tag="SF3301"
/db_xref="GeneID:1027056"
CDS 3400165..3400392
/gene="yhdU"
/locus_tag="SF3301"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709058.1"
/db_xref="GeneID:1027056"
/translation="MVKHAQAQVMIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDK
CRNMNSVNPLKLVNCDELNFQDRMSVMTPTY"
misc_feature 3400192..3400350
/gene="yhdU"
/locus_tag="SF3301"
/note="Protein of unknown function (DUF2556); Region:
DUF2556; pfam10831"
/db_xref="CDD:431515"
mobile_element complement(3400371..3401138)
/mobile_element_type="insertion sequence:IS1"
gene complement(3400386..3400889)
/gene="insB"
/locus_tag="SF3302"
/db_xref="GeneID:1027039"
CDS complement(3400386..3400889)
/gene="insB"
/locus_tag="SF3302"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_709059.1"
/db_xref="GeneID:1027039"
/translation="MSRQRTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD
EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG
WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHY
LNIKHYQ"
misc_feature complement(3400389..3400781)
/gene="insB"
/locus_tag="SF3302"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene 3400964..3401290
/locus_tag="SF3303"
/db_xref="GeneID:1027043"
CDS 3400964..3401290
/locus_tag="SF3303"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709060.1"
/db_xref="GeneID:1027043"
/translation="MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTL
KSPSYTKSVSWQHYPFSHHCGALFLLFPVYTQLIATRNRAQKLALLLLIRGWPQTGKR
RFPNVL"
gene 3401319..3402344
/gene="yhdW"
/locus_tag="SF3304"
/db_xref="GeneID:1027049"
CDS 3401319..3402344
/gene="yhdW"
/locus_tag="SF3304"
/note="Code: E; COG: COG0834"
/codon_start=1
/transl_table=11
/product="substrate-binding transport protein"
/protein_id="NP_709061.1"
/db_xref="GeneID:1027049"
/translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
LPRFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLS
RNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELN
VADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL
PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH
LLGKEGDYGKDLKLDNKWAYNIIKQVSNYSEIFERNVGSESPLKIKRGQNNLWNNGGI
QYAPPVR"
misc_feature 3401400..3402107
/gene="yhdW"
/locus_tag="SF3304"
/note="Substrate bindng domain of ABC
glutamate/glutamine/aspartate/asparagine transporter; the
type 2 periplasmic binding protein fold; Region:
PBP2_BztA; cd13692"
/db_xref="CDD:270410"
misc_feature order(3401442..3401444,3401451..3401453,3401583..3401585,
3401628..3401630,3401649..3401651,3401781..3401786,
3401907..3401912,3401997..3401999)
/gene="yhdW"
/locus_tag="SF3304"
/note="putative peptide binding site [polypeptide
binding]; other site"
/db_xref="CDD:270410"
misc_feature order(3401469..3401471,3401481..3401483,3401853..3401855,
3401862..3401864)
/gene="yhdW"
/locus_tag="SF3304"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:270410"
gene 3402394..3402979
/locus_tag="SF3305"
/pseudogene="unknown"
/db_xref="GeneID:1027057"
mobile_element complement(3402958..3403725)
/mobile_element_type="insertion sequence:IS1"
gene complement(3402973..3403368)
/gene="insB"
/locus_tag="SF3306"
/db_xref="GeneID:1027055"
CDS complement(3402973..3403368)
/gene="insB"
/locus_tag="SF3306"
/note="Code: L; COG: COG1662"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsB"
/protein_id="NP_709063.1"
/db_xref="GeneID:1027055"
/translation="MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
LVRKSLSFSKSVELHDKVIGHYLNIKHYQ"
misc_feature complement(3402976..3403365)
/gene="insB"
/locus_tag="SF3306"
/note="IS1 transposase; Region: DDE_Tnp_IS1; pfam03400"
/db_xref="CDD:281403"
gene complement(3403395..3403670)
/gene="insA"
/locus_tag="SF3307"
/db_xref="GeneID:1023414"
CDS complement(3403395..3403670)
/gene="insA"
/locus_tag="SF3307"
/note="Code: L; COG: COG3677"
/codon_start=1
/transl_table=11
/product="insertion element IS1 protein InsA"
/protein_id="NP_709064.1"
/db_xref="GeneID:1023414"
/translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
YTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR"
misc_feature complement(<3403398..3403649)
/gene="insA"
/locus_tag="SF3307"
/note="IS1 family transposase; Region: transpos_IS1;
NF033558"
/db_xref="CDD:468085"
gene 3403726..3404266
/gene="yhdX"
/locus_tag="SF3308"
/pseudo
/db_xref="GeneID:1025447"
misc_feature 3403726..3404266
/gene="yhdX"
/locus_tag="SF3308"
/note="Similar to Escherichia coli K12 transport system
permease gi: 1789669 (369 aa). BLAST with identity of 97%
in 180 aa. This CDS has been truncated. The sequence has
been checked and is believed to be correct."
/pseudo
gene 3404368..3405471
/gene="yhdY"
/locus_tag="SF3309"
/db_xref="GeneID:1027042"
CDS 3404368..3405471
/gene="yhdY"
/locus_tag="SF3309"
/note="Code: E; COG: COG0765"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_709065.2"
/db_xref="GeneID:1027042"
/translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL
ALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
PLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG
YVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH"
misc_feature 3404833..3405459
/gene="yhdY"
/locus_tag="SF3309"
/note="ABC-type amino acid transport system, permease
component [Amino acid transport and metabolism]; Region:
HisM; COG0765"
/db_xref="CDD:440528"
gene 3405479..3406237
/gene="yhdZ"
/locus_tag="SF3310"
/db_xref="GeneID:1027053"
CDS 3405479..3406237
/gene="yhdZ"
/locus_tag="SF3310"
/note="Code: E; COG: COG1126"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_709066.1"
/db_xref="GeneID:1027053"
/translation="MSQILLQPANAMITLENVHKWYGQFHVLKNINLTVQPGERIVLC
GPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPH
LTVLQNCTLAPIWVRKMPKKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIAR
SLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVI
FMDRGEIVEQATPDEFFAHPKSERTRAFLSQVIH"
misc_feature 3405512..3406228
/gene="yhdZ"
/locus_tag="SF3310"
/note="ABC-type polar amino acid transport system, ATPase
component [Amino acid transport and metabolism]; Region:
GlnQ; COG1126"
/db_xref="CDD:440743"
gene complement(3406298..3406416)
/gene="rrfF"
/locus_tag="SF4511"
/db_xref="GeneID:1027022"
rRNA complement(3406298..3406416)
/gene="rrfF"
/locus_tag="SF4511"
/product="5S ribosomal RNA"
/db_xref="GeneID:1027022"
gene complement(3406455..3406530)
/locus_tag="SF4512"
/db_xref="GeneID:3161780"
tRNA complement(3406455..3406530)
/locus_tag="SF4512"
/product="tRNA-Thr"
/codon_recognized="ACC"
/db_xref="GeneID:3161780"
gene complement(3406543..3406661)
/gene="rrfD"
/locus_tag="SF4513"
/db_xref="GeneID:1027058"
rRNA complement(3406543..3406661)
/gene="rrfD"
/locus_tag="SF4513"
/product="5S ribosomal RNA"
/db_xref="GeneID:1027058"
gene complement(3406756..3409659)
/gene="rrlD"
/locus_tag="SF4514"
/db_xref="GeneID:1026860"
rRNA complement(3406756..3409659)
/gene="rrlD"
/locus_tag="SF4514"
/product="23S ribosomal RNA"
/db_xref="GeneID:1026860"
gene complement(3409853..3409928)
/locus_tag="SF4515"
/db_xref="GeneID:3161803"
tRNA complement(3409853..3409928)
/locus_tag="SF4515"
/product="tRNA-Glu"
/codon_recognized="GAA"
/db_xref="GeneID:3161803"
gene complement(3410014..3411555)
/gene="rrsD"
/locus_tag="SF4516"
/db_xref="GeneID:1027021"
rRNA complement(3410014..3411555)
/gene="rrsD"
/locus_tag="SF4516"
/product="16S ribosomal RNA"
/db_xref="GeneID:1027021"
gene 3411809..3412579
/gene="yrdA"
/locus_tag="SF3311"
/db_xref="GeneID:1026862"
CDS 3411809..3412579
/gene="yrdA"
/locus_tag="SF3311"
/note="Code: R; COG: COG0663"
/codon_start=1
/transl_table=11
/product="transferase"
/protein_id="NP_709067.2"
/db_xref="GeneID:1026862"
/translation="MKCFTLSSQRRRIIGIPIFCTSIFLIFFSVCCFFTLFAAIAHKT
VLFCILKDLHKANNAPKVISKSFIAEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGD
VRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVT
VGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSP
VKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP"
misc_feature 3412037..3412558
/gene="yrdA"
/locus_tag="SF3311"
/note="Carbonic anhydrase or acetyltransferase, isoleucine
patch superfamily [General function prediction only];
Region: PaaY; COG0663"
/db_xref="CDD:440427"
gene complement(3412555..3412812)
/gene="yrdB"
/locus_tag="SF3312"
/db_xref="GeneID:1027050"
CDS complement(3412555..3412812)
/gene="yrdB"
/locus_tag="SF3312"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709068.1"
/db_xref="GeneID:1027050"
/translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF
TGDTPEQWLASFRQHRWDLEEEADNLIQEQSEDDQGWVWLP"
misc_feature complement(3412561..3412800)
/gene="yrdB"
/locus_tag="SF3312"
/note="Protein of unknown function (DUF1488); Region:
DUF1488; pfam07369"
/db_xref="CDD:429431"
gene complement(3412809..3413627)
/gene="aroE"
/locus_tag="SF3313"
/db_xref="GeneID:1026495"
CDS complement(3412809..3413627)
/gene="aroE"
/locus_tag="SF3313"
/note="Code: E; COG: COG0169"
/codon_start=1
/transl_table=11
/product="shikimate 5-dehydrogenase"
/protein_id="NP_709069.2"
/db_xref="GeneID:1026495"
/translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
NTLNAFFRAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTD
GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKG
KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
misc_feature complement(3412815..3413624)
/gene="aroE"
/locus_tag="SF3313"
/note="shikimate dehydrogenase; Region: aroE; TIGR00507"
/db_xref="CDD:161904"
gene complement(3413632..3414204)
/gene="yrdC"
/locus_tag="SF3314"
/db_xref="GeneID:1027023"
CDS complement(3413632..3414204)
/gene="yrdC"
/locus_tag="SF3314"
/note="Code: J; COG: COG0009"
/codon_start=1
/transl_table=11
/product="tRNA(ANN) t(6)A37 threonylcarbamoyladenosine
modification protein"
/protein_id="NP_709070.2"
/db_xref="GeneID:1027023"
/translation="MNNNLQGDAIAAAIDVLNEKRVIAYPTEAVFGVGCDPDSETAVM
RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSCWPGPVTFVFPAPAT
TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
AFPVVPGETRGRLNPSEIRDALTGELFRQG"
misc_feature complement(3413635..3414204)
/gene="yrdC"
/locus_tag="SF3314"
/note="L-threonylcarbamoyladenylate synthase type 1 TsaC;
Region: PRK10634"
/db_xref="CDD:182603"
gene complement(3414209..3414727)
/gene="yrdD"
/locus_tag="SF3315"
/db_xref="GeneID:1027035"
CDS complement(3414209..3414727)
/gene="yrdD"
/locus_tag="SF3315"
/note="Code: L; COG: COG0551"
/codon_start=1
/transl_table=11
/product="DNA topoisomerase"
/protein_id="NP_709071.2"
/db_xref="GeneID:1027035"
/translation="MRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSAD
GHIVKVLEGQVCPVCGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDETAITCPQCR
TGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFC
ASKQCGKPVSAE"
misc_feature complement(3414476..>3414718)
/gene="yrdD"
/locus_tag="SF3315"
/note="DNA topoisomerase I, ssDNA-binding Zn-finger and
Zn-ribbon domains [Replication, recombination and repair];
Region: YrdD; COG0551"
/db_xref="CDD:440317"
misc_feature complement(3414227..>3414592)
/gene="yrdD"
/locus_tag="SF3315"
/note="DNA topoisomerase I, ssDNA-binding Zn-finger and
Zn-ribbon domains [Replication, recombination and repair];
Region: YrdD; COG0551"
/db_xref="CDD:440317"
gene complement(3414780..3415238)
/gene="smg"
/locus_tag="SF3316"
/db_xref="GeneID:1026863"
CDS complement(3414780..3415238)
/gene="smg"
/locus_tag="SF3316"
/note="Code: S; COG: COG2922"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709072.2"
/db_xref="GeneID:1026863"
/translation="MYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEK
LADYQEGLAEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVI
ERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
misc_feature complement(3414783..3415238)
/gene="smg"
/locus_tag="SF3316"
/note="hypothetical protein; Validated; Region: PRK03430"
/db_xref="CDD:235125"
gene complement(3415225..3416349)
/gene="smf"
/locus_tag="SF3317"
/db_xref="GeneID:1027028"
CDS complement(3415225..3416349)
/gene="smf"
/locus_tag="SF3317"
/note="Code: LN; COG: COG0758"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709073.2"
/db_xref="GeneID:1027028"
/translation="MVDIEIWLRLMSISSLYGDDMVRIAHWLAKQSHIDAVVLQQTGL
TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLQATTDYPGALFVEGEL
HALHSFQLAVVGSRAHSWYGERWGRLFCETLATCGVTITSGLARGIDGVVHKAALQVN
GVSIAVLGNGLNTIHPRRHARLAASLFEQGGALVSEFPLDVPPLAYNFPRRNRIISGL
SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP
VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
misc_feature complement(3415228..3416349)
/gene="smf"
/locus_tag="SF3317"
/note="DNA-protecting protein DprA; Region: PRK10736"
/db_xref="CDD:236747"
gene 3416514..3417023
/gene="def"
/locus_tag="SF3318"
/db_xref="GeneID:1027015"
CDS 3416514..3417023
/gene="def"
/locus_tag="SF3318"
/note="Code: J; COG: COG0242"
/codon_start=1
/transl_table=11
/product="peptide deformylase"
/protein_id="NP_709074.1"
/db_xref="GeneID:1027015"
/translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
RAEKVKIRALDRDGKPFELEAEGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
KLDRLKARA"
misc_feature 3416514..3417002
/gene="def"
/locus_tag="SF3318"
/note="peptide deformylase; Reviewed; Region: def;
PRK00150"
/db_xref="CDD:234668"
misc_feature order(3416643..3416651,3416664..3416666,3416781..3416789,
3416910..3416915,3416922..3416924)
/gene="def"
/locus_tag="SF3318"
/note="active site"
/db_xref="CDD:238271"
misc_feature order(3416649..3416651,3416664..3416666,3416787..3416789,
3416913..3416915)
/gene="def"
/locus_tag="SF3318"
/note="catalytic residues [active]"
/db_xref="CDD:238271"
misc_feature order(3416784..3416786,3416910..3416912,3416922..3416924)
/gene="def"
/locus_tag="SF3318"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238271"
gene 3417038..3417985
/gene="fmt"
/locus_tag="SF3319"
/db_xref="GeneID:1027026"
CDS 3417038..3417985
/gene="fmt"
/locus_tag="SF3319"
/note="Code: J; COG: COG0223"
/codon_start=1
/transl_table=11
/product="methionyl-tRNA formyltransferase"
/protein_id="NP_709075.1"
/db_xref="GeneID:1027026"
/translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
KKLMPSPIKVLAEEEGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEM
PRLGCINIHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS
LSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLV"
misc_feature 3417050..3417979
/gene="fmt"
/locus_tag="SF3319"
/note="Methionyl-tRNA formyltransferase [Translation,
ribosomal structure and biogenesis]; Region: Fmt; COG0223"
/db_xref="CDD:439993"
gene 3418031..3419320
/gene="sun"
/locus_tag="SF3320"
/db_xref="GeneID:1027014"
CDS 3418031..3419320
/gene="sun"
/locus_tag="SF3320"
/note="Code: J; COG: COG0144"
/codon_start=1
/transl_table=11
/product="16S rRNA m5C967 methyltransferase"
/protein_id="NP_709076.2"
/db_xref="GeneID:1027014"
/translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
VEGAIAIKRPQLKGLINGVLRQFQRRQEELLAEFNTRDARYLHPSWLLKRLQKAYPEQ
WQSIAEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV
DIDEQRLSRIYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH
PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
TADAELCETGTPEQPGKQNQPGAEEGDGFFYAKLIKK"
misc_feature 3418046..3419314
/gene="sun"
/locus_tag="SF3320"
/note="16S rRNA (cytosine(967)-C(5))-methyltransferase
RsmB; Region: PRK10901"
/db_xref="CDD:236790"
gene 3419342..3420718
/gene="trkA"
/locus_tag="SF3321"
/db_xref="GeneID:1027048"
CDS 3419342..3420718
/gene="trkA"
/locus_tag="SF3321"
/note="Code: P; COG: COG0569"
/codon_start=1
/transl_table=11
/product="potassium transporter membrane protein"
/protein_id="NP_709077.1"
/db_xref="GeneID:1027048"
/translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN
TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
FQPSPFFL"
misc_feature 3419342..3420709
/gene="trkA"
/locus_tag="SF3321"
/note="Trk system potassium transporter TrkA; Region:
trkA; PRK09496"
/db_xref="CDD:236541"
mobile_element complement(3420817..3423570)
/mobile_element_type="insertion sequence:ISSfl4"
gene 3420899..3421573
/locus_tag="SF3322"
/db_xref="GeneID:1025293"
CDS 3420899..3421573
/locus_tag="SF3322"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 transposase"
/protein_id="NP_709078.1"
/db_xref="GeneID:1025293"
/translation="MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTI
HTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSRE
FKVRLAKQALQPGAVVARIAREHDINNNLLFKWKSQYEDGLLSDDDIQECMPVPVALT
DTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPELLRALIRE
MKGGIR"
misc_feature 3420932..3421516
/locus_tag="SF3322"
/note="IS66-like element accessory protein TnpA; Region:
IS66_access_TnpA; NF038385"
/db_xref="CDD:439678"
gene 3421570..3421917
/locus_tag="SF3323"
/db_xref="GeneID:1027029"
CDS 3421570..3421917
/locus_tag="SF3323"
/note="Code: L; COG: COG3436"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 ORF2"
/protein_id="NP_709079.1"
/db_xref="GeneID:1027029"
/translation="MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIF
VFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAW
PHPKRTERPGIRI"
misc_feature 3421597..3421866
/locus_tag="SF3323"
/note="IS66 family insertion sequence element accessory
protein TnpB; Region: IS66_TnpB; NF033819"
/db_xref="CDD:411392"
gene 3421937..3423538
/locus_tag="SF3324"
/db_xref="GeneID:1027020"
CDS 3421937..3423538
/locus_tag="SF3324"
/note="Code: L; COG: COG3436"
/codon_start=1
/transl_table=11
/product="insertion sequence element ISSfl4 transposase"
/protein_id="NP_709080.1"
/db_xref="GeneID:1027020"
/translation="MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQL
DRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENRLNTARNLLEDASSVTDSPDTSP
PSENPIASKPEFPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQL
DIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIP
LYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVL
APGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADA
YAGYNVLYETGRVKEAGCLAHARRKTHDEDVRRPTEMTQEALRRIAELYDIEAEIRGS
PAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDG
RVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLRE
VIEKLNDWPSNQVHELLPWNFSSVK"
misc_feature 3422051..3422332
/locus_tag="SF3324"
/note="Transposase C of IS166 homeodomain; Region:
LZ_Tnp_IS66; pfam13007"
/db_xref="CDD:463771"
misc_feature 3422279..3423475
/locus_tag="SF3324"
/note="IS66 family transposase; Region: transpos_IS66;
NF033517"
/db_xref="CDD:468053"
mobile_element 3423570..3423911
/note="partial"
/mobile_element_type="insertion sequence:ISSfl4"
gene complement(3423999..3424382)
/gene="rplQ"
/locus_tag="SF3326"
/db_xref="GeneID:1027046"
CDS complement(3423999..3424382)
/gene="rplQ"
/locus_tag="SF3326"
/note="Code: J; COG: COG0203"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L17"
/protein_id="NP_709082.1"
/db_xref="GeneID:1027046"
/translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
RAGDNAPMAYIELVDRSEKAEAAAE"
misc_feature complement(3424020..3424382)
/gene="rplQ"
/locus_tag="SF3326"
/note="Ribosomal protein L17 [Translation, ribosomal
structure and biogenesis]; Region: RplQ; COG0203"
/db_xref="CDD:439973"
gene complement(3424423..3425412)
/gene="rpoA"
/locus_tag="SF3327"
/db_xref="GeneID:1027027"
CDS complement(3424423..3425412)
/gene="rpoA"
/locus_tag="SF3327"
/note="Code: K; COG: COG0202"
/codon_start=1
/transl_table=11
/product="DNA-directed RNA polymerase subunit alpha"
/protein_id="NP_709083.1"
/db_xref="GeneID:1027027"
/translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
misc_feature complement(3424447..3425397)
/gene="rpoA"
/locus_tag="SF3327"
/note="DNA-directed RNA polymerase, alpha subunit/40 kD
subunit [Transcription]; Region: RpoA; COG0202"
/db_xref="CDD:439972"
gene complement(3425438..3426046)
/gene="rpsD"
/locus_tag="SF3328"
/db_xref="GeneID:1027033"
CDS complement(3425438..3426046)
/gene="rpsD"
/locus_tag="SF3328"
/note="Code: J; COG: COG0522"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S4"
/protein_id="NP_709084.2"
/db_xref="GeneID:1027033"
/translation="MGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRL
SDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMG
FGATRAEARQLVSHKAIMVPGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQ
REKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
misc_feature complement(3425441..3426043)
/gene="rpsD"
/locus_tag="SF3328"
/note="Ribosomal protein S4 or related protein
[Translation, ribosomal structure and biogenesis]; Region:
RpsD; COG0522"
/db_xref="CDD:440288"
gene complement(3426092..3426481)
/gene="rpsK"
/locus_tag="SF3329"
/db_xref="GeneID:1027041"
CDS complement(3426092..3426481)
/gene="rpsK"
/locus_tag="SF3329"
/note="Code: J; COG: COG0100"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S11"
/protein_id="NP_709085.1"
/db_xref="GeneID:1027041"
/translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
AGFRITNITDVTPIPHNGCRPPKKRRV"
misc_feature complement(3426095..3426478)
/gene="rpsK"
/locus_tag="SF3329"
/note="30S ribosomal protein S11; Validated; Region:
PRK05309"
/db_xref="CDD:180007"
gene complement(3426498..3426854)
/gene="rpsM"
/locus_tag="SF3330"
/db_xref="GeneID:1026992"
CDS complement(3426498..3426854)
/gene="rpsM"
/locus_tag="SF3330"
/note="Code: J; COG: COG0099"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S13"
/protein_id="NP_709086.1"
/db_xref="GeneID:1026992"
/translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
KTNARTRKGPRKPIKK"
misc_feature complement(3426501..3426854)
/gene="rpsM"
/locus_tag="SF3330"
/note="30S ribosomal protein S13; Validated; Region: rpsM;
PRK05179"
/db_xref="CDD:235358"
gene complement(3427001..3427117)
/gene="rpmJ"
/locus_tag="SF3331"
/db_xref="GeneID:1027024"
CDS complement(3427001..3427117)
/gene="rpmJ"
/locus_tag="SF3331"
/note="Code: J; COG: COG0257"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L36"
/protein_id="NP_709087.1"
/db_xref="GeneID:1027024"
/translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
misc_feature complement(3427004..3427117)
/gene="rpmJ"
/locus_tag="SF3331"
/note="Ribosomal protein L36 [Translation, ribosomal
structure and biogenesis]; Region: RpmJ; COG0257"
/db_xref="CDD:440027"
gene complement(3427149..3428480)
/gene="secY"
/locus_tag="SF3332"
/db_xref="GeneID:1026864"
CDS complement(3427149..3428480)
/gene="secY"
/locus_tag="SF3332"
/note="Code: N; COG: COG0201"
/codon_start=1
/transl_table=11
/product="preprotein translocase subunit SecY"
/protein_id="NP_709088.1"
/db_xref="GeneID:1026864"
/translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
misc_feature complement(3427179..3428429)
/gene="secY"
/locus_tag="SF3332"
/note="Preprotein translocase subunit SecY [Intracellular
trafficking, secretion, and vesicular transport]; Region:
SecY; COG0201"
/db_xref="CDD:439971"
gene complement(3428488..3428922)
/gene="rplO"
/locus_tag="SF3333"
/db_xref="GeneID:1027045"
CDS complement(3428488..3428922)
/gene="rplO"
/locus_tag="SF3333"
/note="Code: J; COG: COG0200"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L15"
/protein_id="NP_709089.1"
/db_xref="GeneID:1027045"
/translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
misc_feature complement(3428491..3428922)
/gene="rplO"
/locus_tag="SF3333"
/note="Ribosomal protein L15 [Translation, ribosomal
structure and biogenesis]; Region: RplO; COG0200"
/db_xref="CDD:439970"
gene complement(3428926..3429105)
/gene="rpmD"
/locus_tag="SF3334"
/db_xref="GeneID:1027036"
CDS complement(3428926..3429105)
/gene="rpmD"
/locus_tag="SF3334"
/note="Code: J; COG: COG1841"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L30"
/protein_id="NP_709090.1"
/db_xref="GeneID:1027036"
/translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
RGMINAVSFMVKVEE"
misc_feature complement(3428929..3429102)
/gene="rpmD"
/locus_tag="SF3334"
/note="50S ribosomal protein L30; Reviewed; Region: rpmD;
PRK05611"
/db_xref="CDD:180163"
misc_feature complement(order(3428965..3428970,3428974..3428982,
3428989..3428994,3429007..3429009,3429016..3429018,
3429022..3429030,3429037..3429042,3429049..3429057,
3429061..3429066,3429070..3429075))
/gene="rpmD"
/locus_tag="SF3334"
/note="23S rRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:100100"
gene complement(3429109..3429612)
/gene="rpsE"
/locus_tag="SF3335"
/db_xref="GeneID:1026986"
CDS complement(3429109..3429612)
/gene="rpsE"
/locus_tag="SF3335"
/note="Code: J; COG: COG0098"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S5"
/protein_id="NP_709091.1"
/db_xref="GeneID:1026986"
/translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
VEEILGK"
misc_feature complement(3429115..3429612)
/gene="rpsE"
/locus_tag="SF3335"
/note="30S ribosomal protein S5; Validated; Region: rpsE;
PRK00550"
/db_xref="CDD:234790"
gene complement(3429627..3429980)
/gene="rplR"
/locus_tag="SF3336"
/db_xref="GeneID:1027032"
CDS complement(3429627..3429980)
/gene="rplR"
/locus_tag="SF3336"
/note="Code: J; COG: COG0256"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L18"
/protein_id="NP_709092.1"
/db_xref="GeneID:1027032"
/translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
VQALADAAREAGLQF"
misc_feature complement(3429630..3429923)
/gene="rplR"
/locus_tag="SF3336"
/note="Ribosomal protein L18 [Translation, ribosomal
structure and biogenesis]; Region: RplR; COG0256"
/db_xref="CDD:440026"
gene complement(3429990..3430523)
/gene="rplF"
/locus_tag="SF3337"
/db_xref="GeneID:1026981"
CDS complement(3429990..3430523)
/gene="rplF"
/locus_tag="SF3337"
/note="Code: J; COG: COG0097"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L6"
/protein_id="NP_709093.1"
/db_xref="GeneID:1026981"
/translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
GVRYADEVVRTKEAKKK"
misc_feature complement(3429993..3430520)
/gene="rplF"
/locus_tag="SF3337"
/note="Ribosomal protein L6P/L9E [Translation, ribosomal
structure and biogenesis]; Region: RplF; COG0097"
/db_xref="CDD:439867"
gene complement(3430536..3430928)
/gene="rpsH"
/locus_tag="SF3338"
/db_xref="GeneID:1026989"
CDS complement(3430536..3430928)
/gene="rpsH"
/locus_tag="SF3338"
/note="Code: J; COG: COG0096"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S8"
/protein_id="NP_709094.1"
/db_xref="GeneID:1026989"
/translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
VVSTSKGVMTDRAARQAGLGGEIICYVA"
misc_feature complement(3430539..3430925)
/gene="rpsH"
/locus_tag="SF3338"
/note="30S ribosomal protein S8; Validated; Region: rpsH;
PRK00136"
/db_xref="CDD:234658"
gene complement(3430962..3431267)
/gene="rpsN"
/locus_tag="SF3339"
/db_xref="GeneID:1027019"
CDS complement(3430962..3431267)
/gene="rpsN"
/locus_tag="SF3339"
/note="Code: J; COG: COG0199"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S14"
/protein_id="NP_709095.1"
/db_xref="GeneID:1027019"
/translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
misc_feature complement(3430965..3431267)
/gene="rpsN"
/locus_tag="SF3339"
/note="30S ribosomal protein S14; Reviewed; Region: rpsN;
PRK08881"
/db_xref="CDD:181574"
gene complement(3431282..3431821)
/gene="rplE"
/locus_tag="SF3340"
/db_xref="GeneID:1027030"
CDS complement(3431282..3431821)
/gene="rplE"
/locus_tag="SF3340"
/note="Code: J; COG: COG0094"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L5"
/protein_id="NP_709096.1"
/db_xref="GeneID:1027030"
/translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
ADKKLLDNAAADLAAFSRQKPLSTKARKFVACFKIRQGYPIGCKVTLRGERMWEFFER
LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
KSDEEGRALLAAFDFPFRK"
misc_feature complement(3431285..3431821)
/gene="rplE"
/locus_tag="SF3340"
/note="Ribosomal protein L5 [Translation, ribosomal
structure and biogenesis]; Region: RplE; COG0094"
/db_xref="CDD:439864"
gene complement(3431836..3432150)
/gene="rplX"
/locus_tag="SF3341"
/db_xref="GeneID:1023963"
CDS complement(3431836..3432150)
/gene="rplX"
/locus_tag="SF3341"
/note="Code: J; COG: COG0198"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L24"
/protein_id="NP_709097.1"
/db_xref="GeneID:1023963"
/translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIIEGINLVKK
HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
IK"
misc_feature complement(3431842..3432150)
/gene="rplX"
/locus_tag="SF3341"
/note="Ribosomal protein L24 [Translation, ribosomal
structure and biogenesis]; Region: RplX; COG0198"
/db_xref="CDD:439968"
gene complement(3432161..3432532)
/gene="rplN"
/locus_tag="SF3342"
/db_xref="GeneID:1027016"
CDS complement(3432161..3432532)
/gene="rplN"
/locus_tag="SF3342"
/note="Code: J; COG: COG0093"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L14"
/protein_id="NP_709098.1"
/db_xref="GeneID:1027016"
/translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
VTRELRSEKFMKIISLAPEVL"
misc_feature complement(3432164..3432532)
/gene="rplN"
/locus_tag="SF3342"
/note="Ribosomal protein L14 [Translation, ribosomal
structure and biogenesis]; Region: RplN; COG0093"
/db_xref="CDD:439863"
gene complement(3432697..3432951)
/gene="rpsQ"
/locus_tag="SF3343"
/db_xref="GeneID:1026995"
CDS complement(3432697..3432951)
/gene="rpsQ"
/locus_tag="SF3343"
/note="Code: J; COG: COG0186"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S17"
/protein_id="NP_709099.1"
/db_xref="GeneID:1026995"
/translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
misc_feature complement(3432703..3432942)
/gene="rpsQ"
/locus_tag="SF3343"
/note="Ribosomal protein S17 [Translation, ribosomal
structure and biogenesis]; Region: RpsQ; COG0186"
/db_xref="CDD:439956"
gene complement(3432951..3433142)
/gene="rpmC"
/locus_tag="SF3344"
/db_xref="GeneID:1026974"
CDS complement(3432951..3433142)
/gene="rpmC"
/locus_tag="SF3344"
/note="Code: J; COG: COG0255"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L29"
/protein_id="NP_709100.1"
/db_xref="GeneID:1026974"
/translation="MKAKELREKSIEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
QVRRDVARVKTLLNEKAGA"
misc_feature complement(3432954..3433142)
/gene="rpmC"
/locus_tag="SF3344"
/note="Ribosomal protein L29 [Translation, ribosomal
structure and biogenesis]; Region: RpmC; COG0255"
/db_xref="CDD:440025"
gene complement(3433142..3433552)
/gene="rplP"
/locus_tag="SF3345"
/db_xref="GeneID:1026982"
CDS complement(3433142..3433552)
/gene="rplP"
/locus_tag="SF3345"
/note="Code: J; COG: COG0197"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L16"
/protein_id="NP_709101.1"
/db_xref="GeneID:1026982"
/translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
YEMGGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
misc_feature complement(3433148..3433552)
/gene="rplP"
/locus_tag="SF3345"
/note="Ribosomal protein L16/L10AE [Translation, ribosomal
structure and biogenesis]; Region: RplP; COG0197"
/db_xref="CDD:439967"
gene complement(3433565..3434266)
/gene="rpsC"
/locus_tag="SF3346"
/db_xref="GeneID:1026985"
CDS complement(3433565..3434266)
/gene="rpsC"
/locus_tag="SF3346"
/note="Code: J; COG: COG0092"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S3"
/protein_id="NP_709102.2"
/db_xref="GeneID:1026985"
/translation="MGQKVHRNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
KPAAQPKKQQRKGRK"
misc_feature complement(3433589..3434266)
/gene="rpsC"
/locus_tag="SF3346"
/note="Ribosomal protein S3 [Translation, ribosomal
structure and biogenesis]; Region: RpsC; COG0092"
/db_xref="CDD:439862"
gene complement(3434284..3434616)
/gene="rplV"
/locus_tag="SF3347"
/db_xref="GeneID:1026990"
CDS complement(3434284..3434616)
/gene="rplV"
/locus_tag="SF3347"
/note="Code: J; COG: COG0091"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L22"
/protein_id="NP_709103.1"
/db_xref="GeneID:1026990"
/translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
VQVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
ITVVVSDR"
misc_feature complement(3434287..3434616)
/gene="rplV"
/locus_tag="SF3347"
/note="Ribosomal protein L22 [Translation, ribosomal
structure and biogenesis]; Region: RplV; COG0091"
/db_xref="CDD:439861"
gene complement(3434631..3434909)
/gene="rpsS"
/locus_tag="SF3348"
/db_xref="GeneID:1027008"
CDS complement(3434631..3434909)
/gene="rpsS"
/locus_tag="SF3348"
/note="Code: J; COG: COG0185"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S19"
/protein_id="NP_709104.1"
/db_xref="GeneID:1027008"
/translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
misc_feature complement(3434661..3434909)
/gene="rpsS"
/locus_tag="SF3348"
/note="30S ribosomal protein S19; Reviewed; Region: rpsS;
PRK00357"
/db_xref="CDD:178985"
gene complement(3434926..3435747)
/gene="rplB"
/locus_tag="SF3349"
/db_xref="GeneID:1027010"
CDS complement(3434926..3435747)
/gene="rplB"
/locus_tag="SF3349"
/note="Code: J; COG: COG0090"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L2"
/protein_id="NP_709105.1"
/db_xref="GeneID:1027010"
/translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
misc_feature complement(3434929..3435747)
/gene="rplB"
/locus_tag="SF3349"
/note="Ribosomal protein L2 [Translation, ribosomal
structure and biogenesis]; Region: RplB; COG0090"
/db_xref="CDD:439860"
gene complement(3435765..3436067)
/gene="rplW"
/locus_tag="SF3350"
/db_xref="GeneID:1026994"
CDS complement(3435765..3436067)
/gene="rplW"
/locus_tag="SF3350"
/note="Code: J; COG: COG0089"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L23"
/protein_id="NP_709106.1"
/db_xref="GeneID:1026994"
/translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
misc_feature complement(3435771..3436046)
/gene="rplW"
/locus_tag="SF3350"
/note="50S ribosomal protein L23; Reviewed; Region: rplW;
PRK05738"
/db_xref="CDD:235586"
gene complement(3436064..3436669)
/gene="rplD"
/locus_tag="SF3351"
/db_xref="GeneID:1027011"
CDS complement(3436064..3436669)
/gene="rplD"
/locus_tag="SF3351"
/note="Code: J; COG: COG0088"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L4"
/protein_id="NP_709107.1"
/db_xref="GeneID:1027011"
/translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
ARNLQKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
misc_feature complement(3436067..3436669)
/gene="rplD"
/locus_tag="SF3351"
/note="Ribosomal protein L4 [Translation, ribosomal
structure and biogenesis]; Region: RplD; COG0088"
/db_xref="CDD:439858"
gene complement(3436680..3437309)
/gene="rplC"
/locus_tag="SF3352"
/db_xref="GeneID:1027004"
CDS complement(3436680..3437309)
/gene="rplC"
/locus_tag="SF3352"
/note="Code: J; COG: COG0087"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L3"
/protein_id="NP_709108.1"
/db_xref="GeneID:1027004"
/translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
misc_feature complement(3436683..3437309)
/gene="rplC"
/locus_tag="SF3352"
/note="Ribosomal protein L3 [Translation, ribosomal
structure and biogenesis]; Region: RplC; COG0087"
/db_xref="CDD:439857"
gene complement(3437342..3437653)
/gene="rpsJ"
/locus_tag="SF3353"
/db_xref="GeneID:1027009"
CDS complement(3437342..3437653)
/gene="rpsJ"
/locus_tag="SF3353"
/note="Code: J; COG: COG0051"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S10"
/protein_id="NP_709109.1"
/db_xref="GeneID:1027009"
/translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
G"
misc_feature complement(3437348..3437653)
/gene="rpsJ"
/locus_tag="SF3353"
/note="30S ribosomal protein S10; Reviewed; Region: rpsJ;
PRK00596"
/db_xref="CDD:179076"
gene 3438032..3438499
/locus_tag="SF3354"
/pseudogene="unknown"
/db_xref="GeneID:1026988"
gene complement(3438496..3438972)
/gene="bfr"
/locus_tag="SF3355"
/db_xref="GeneID:1026957"
CDS complement(3438496..3438972)
/gene="bfr"
/locus_tag="SF3355"
/note="Code: P; COG: COG2193"
/codon_start=1
/transl_table=11
/product="bacterioferritin"
/protein_id="NP_709111.1"
/db_xref="GeneID:1026957"
/translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVE
YHESIDEMKHADKYIERILFLEGIPNLQDLGKLGIGEDVEEMLQSDLRLELEGAKDLR
EAIAYADSVHDYVSRDMMIEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD"
misc_feature complement(3438499..3438972)
/gene="bfr"
/locus_tag="SF3355"
/note="bacterioferritin; Provisional; Region: PRK10635"
/db_xref="CDD:182604"
misc_feature complement(order(3438805..3438807,3438817..3438819,
3438838..3438840,3438883..3438885,3438904..3438906,
3438928..3438930))
/gene="bfr"
/locus_tag="SF3355"
/note="heme binding site [chemical binding]; other site"
/db_xref="CDD:153099"
misc_feature complement(order(3438592..3438597,3438670..3438672,
3438682..3438684,3438691..3438696,3438811..3438813,
3438820..3438822,3438898..3438900,3438910..3438915,
3438919..3438924))
/gene="bfr"
/locus_tag="SF3355"
/note="ferroxidase pore [active]"
/db_xref="CDD:153099"
misc_feature complement(order(3438583..3438585,3438592..3438594,
3438670..3438672,3438691..3438693,3438811..3438813,
3438820..3438822,3438898..3438900,3438919..3438921))
/gene="bfr"
/locus_tag="SF3355"
/note="ferroxidase diiron center [ion binding]; other
site"
/db_xref="CDD:153099"
gene complement(3439045..3439239)
/gene="yheA"
/locus_tag="SF3356"
/db_xref="GeneID:1026997"
CDS complement(3439045..3439239)
/gene="yheA"
/locus_tag="SF3356"
/note="Code: P; COG: COG2906"
/codon_start=1
/transl_table=11
/product="bacterioferritin-associated ferredoxin"
/protein_id="NP_709112.1"
/db_xref="GeneID:1026997"
/translation="MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
AAREVMQDELMQMPEFKEIA"
misc_feature complement(3439048..3439239)
/gene="yheA"
/locus_tag="SF3356"
/note="bacterioferritin-associated ferredoxin;
Provisional; Region: PRK10509"
/db_xref="CDD:182506"
gene complement(3439422..3440606)
/gene="tuf"
/locus_tag="SF3357"
/db_xref="GeneID:1027018"
CDS complement(3439422..3440606)
/gene="tuf"
/locus_tag="SF3357"
/note="Code: JE; COG: COG0050"
/codon_start=1
/transl_table=11
/product="elongation factor Tu"
/protein_id="NP_709113.2"
/db_xref="GeneID:1027018"
/translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGA
ILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ
YDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDV
FSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVG
VLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFR
TTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKV
LG"
misc_feature complement(3439428..3440606)
/gene="tuf"
/locus_tag="SF3357"
/note="elongation factor Tu; Reviewed; Region: PRK00049"
/db_xref="CDD:234596"
gene complement(3440677..3442791)
/gene="fusA"
/locus_tag="SF3358"
/db_xref="GeneID:1027012"
CDS complement(3440677..3442791)
/gene="fusA"
/locus_tag="SF3358"
/experiment="mass spectrum evidence"
/note="Code: J; COG: COG0480"
/codon_start=1
/transl_table=11
/product="GTP-binding protein chain elongation factor
EF-G"
/protein_id="NP_709114.2"
/db_xref="GeneID:1027012"
/translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRVGANFLKVVNQIKT
RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
EFLKYDEAPSNVAQAVIEARGK"
misc_feature complement(3440680..3442791)
/gene="fusA"
/locus_tag="SF3358"
/note="Translation elongation factor EF-G, a GTPase
[Translation, ribosomal structure and biogenesis]; Region:
FusA; COG0480"
/db_xref="CDD:440248"
gene complement(3442888..3443358)
/gene="rpsG"
/locus_tag="SF3359"
/db_xref="GeneID:1026996"
CDS complement(3442888..3443358)
/gene="rpsG"
/locus_tag="SF3359"
/note="Code: J; COG: COG0049"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S7"
/protein_id="NP_709115.1"
/db_xref="GeneID:1026996"
/translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
misc_feature complement(3442891..3443358)
/gene="rpsG"
/locus_tag="SF3359"
/note="30S ribosomal protein S7; Validated; Region:
PRK05302"
/db_xref="CDD:235398"
misc_feature complement(order(3443002..3443004,3443011..3443016,
3443032..3443034,3443053..3443055,3443065..3443067,
3443074..3443079,3443104..3443106,3443116..3443118,
3443131..3443133,3443233..3443238,3443245..3443259,
3443269..3443277))
/gene="rpsG"
/locus_tag="SF3359"
/note="rRNA binding site [nucleotide binding]; other site"
/db_xref="CDD:271248"
misc_feature complement(order(3443227..3443229,3443236..3443241,
3443248..3443250))
/gene="rpsG"
/locus_tag="SF3359"
/note="S9 interface [polypeptide binding]; other site"
/db_xref="CDD:271248"
misc_feature complement(3442912..3442914)
/gene="rpsG"
/locus_tag="SF3359"
/note="S11 interface [polypeptide binding]; other site"
/db_xref="CDD:271248"
gene complement(3443455..3443829)
/gene="rpsL"
/locus_tag="SF3360"
/db_xref="GeneID:1027017"
CDS complement(3443455..3443829)
/gene="rpsL"
/locus_tag="SF3360"
/note="Code: J; COG: COG0048"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S12"
/protein_id="NP_709116.2"
/db_xref="GeneID:1027017"
/translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
DCSGVKDRKQARSKYGVKRPKA"
misc_feature complement(3443458..3443829)
/gene="rpsL"
/locus_tag="SF3360"
/note="Ribosomal protein S12 [Translation, ribosomal
structure and biogenesis]; Region: RpsL; COG0048"
/db_xref="CDD:439818"
gene complement(3443955..3444242)
/gene="yheL"
/locus_tag="SF3361"
/db_xref="GeneID:1027572"
CDS complement(3443955..3444242)
/gene="yheL"
/locus_tag="SF3361"
/note="Code: P; COG: COG2168"
/codon_start=1
/transl_table=11
/product="sulfur transfer complex subunit TusB"
/protein_id="NP_709117.1"
/db_xref="GeneID:1027572"
/translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
ESLRNAPIKVYALNEDLIARGLTGQILNDIIPIDYTDFVRLTVKHSSQMAW"
misc_feature complement(3443958..3444242)
/gene="yheL"
/locus_tag="SF3361"
/note="sulfurtransferase complex subunit TusB; Region:
PRK13510"
/db_xref="CDD:184101"
gene complement(3444250..3444609)
/gene="yheM"
/locus_tag="SF3362"
/db_xref="GeneID:1026547"
CDS complement(3444250..3444609)
/gene="yheM"
/locus_tag="SF3362"
/note="Code: P; COG: COG2923"
/codon_start=1
/transl_table=11
/product="sulfur relay protein TusC"
/protein_id="NP_709118.1"
/db_xref="GeneID:1026547"
/translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
FQLLSGQKPDAVLARDYIATFKLLSLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
ADALRRELANYDVILRF"
misc_feature complement(3444253..3444609)
/gene="yheM"
/locus_tag="SF3362"
/note="sulfurtransferase complex subunit TusC; Region:
PRK00211"
/db_xref="CDD:178930"
gene complement(3444609..3444995)
/gene="yheN"
/locus_tag="SF3363"
/db_xref="GeneID:1026960"
CDS complement(3444609..3444995)
/gene="yheN"
/locus_tag="SF3363"
/note="Code: P; COG: COG1553"
/codon_start=1
/transl_table=11
/product="sulfur transfer complex subunit TusD"
/protein_id="NP_709119.1"
/db_xref="GeneID:1026960"
/translation="MRFAIVVTGPAYGTQQASSAFQFAQALIAEGHKLSSVFFYREGV
YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
LQPGFTLSGLGALAEASLTCDRVVQF"
misc_feature complement(3444612..3444995)
/gene="yheN"
/locus_tag="SF3363"
/note="sulfurtransferase complex subunit TusD; Region:
PRK00207"
/db_xref="CDD:178928"
gene complement(3444995..3445717)
/gene="yheO"
/locus_tag="SF3364"
/db_xref="GeneID:1026810"
CDS complement(3444995..3445717)
/gene="yheO"
/locus_tag="SF3364"
/note="Code: S; COG: COG2964"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709120.2"
/db_xref="GeneID:1026810"
/translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
SKHTVYLYIRQFKSGDFQGQDK"
misc_feature complement(3445022..3445651)
/gene="yheO"
/locus_tag="SF3364"
/note="Predicted transcriptional regulator YheO, contains
PAS and DNA-binding HTH domains [Transcription]; Region:
YheO; COG2964"
/db_xref="CDD:442204"
gene complement(3445884..3446696)
/gene="fkpA"
/locus_tag="SF3365"
/db_xref="GeneID:1026961"
CDS complement(3445884..3446696)
/gene="fkpA"
/locus_tag="SF3365"
/note="Code: O; COG: COG0545"
/codon_start=1
/transl_table=11
/product="FKBP-type peptidylprolyl isomerase"
/protein_id="NP_709121.1"
/db_xref="GeneID:1026961"
/translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKASFKND
DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
misc_feature complement(3445920..3446696)
/gene="fkpA"
/locus_tag="SF3365"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Provisional; Region: PRK10902"
/db_xref="CDD:236791"
gene 3446917..3447135
/gene="slyX"
/locus_tag="SF3366"
/db_xref="GeneID:1026546"
CDS 3446917..3447135
/gene="slyX"
/locus_tag="SF3366"
/note="Code: S; COG: COG2900"
/codon_start=1
/transl_table=11
/product="phi X174 lysis protein"
/protein_id="NP_709122.1"
/db_xref="GeneID:1026546"
/translation="MQDLSLEARLAELESRLAFQEITIEELNVTVAAHEMEMAKLRDH
LRLLTEKLKASQPSNIASQAEETPPPHY"
misc_feature 3446917..3447132
/gene="slyX"
/locus_tag="SF3366"
/note="phi X174 lysis protein; Provisional; Region:
PRK02793"
/db_xref="CDD:179472"
gene complement(3447184..3447774)
/gene="slyD"
/locus_tag="SF3367"
/db_xref="GeneID:1025309"
CDS complement(3447184..3447774)
/gene="slyD"
/locus_tag="SF3367"
/note="Code: O; COG: COG1047"
/codon_start=1
/transl_table=11
/product="FKBP-type peptidylprolyl isomerase"
/protein_id="NP_709123.1"
/db_xref="GeneID:1025309"
/translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
misc_feature complement(3447187..3447774)
/gene="slyD"
/locus_tag="SF3367"
/note="peptidylprolyl isomerase; Region: PRK10737"
/db_xref="CDD:236748"
gene complement(3447869..3448069)
/gene="yheV"
/locus_tag="SF3368"
/db_xref="GeneID:1026866"
CDS complement(3447869..3448069)
/gene="yheV"
/locus_tag="SF3368"
/note="Code: R; COG: COG3529"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709124.1"
/db_xref="GeneID:1026866"
/translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
ADKEARDHVHKDEQVIGIFHPD"
misc_feature complement(3447872..3448069)
/gene="yheV"
/locus_tag="SF3368"
/note="Predicted nucleic-acid-binding protein, contains
Zn-ribbon domain [General function prediction only];
Region: COG3529"
/db_xref="CDD:442751"
gene complement(3448079..3449816)
/locus_tag="SF3369"
/pseudogene="unknown"
/db_xref="GeneID:1027007"
gene complement(3449816..3450367)
/gene="yheR"
/locus_tag="SF3370"
/db_xref="GeneID:1026554"
CDS complement(3449816..3450367)
/gene="yheR"
/locus_tag="SF3370"
/note="Code: R; COG: COG2249"
/codon_start=1
/transl_table=11
/product="glutathione-regulated potassium-efflux system
ancillary protein KefG"
/protein_id="NP_709126.2"
/db_xref="GeneID:1026554"
/translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
KYWRNVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
KELASHARAYGDWLANPLSPGGR"
misc_feature complement(3449819..3450367)
/gene="yheR"
/locus_tag="SF3370"
/note="glutathione-regulated potassium-efflux system
ancillary protein KefG; Provisional; Region: PRK04930"
/db_xref="CDD:179895"
gene 3450498..3452411
/gene="yheS"
/locus_tag="SF3371"
/db_xref="GeneID:1026869"
CDS 3450498..3452411
/gene="yheS"
/locus_tag="SF3371"
/note="Code: R; COG: COG0488"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="NP_709127.1"
/db_xref="GeneID:1026869"
/translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
ALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDAN
ERNDGHAIATIHSKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
SPIQHLARLAPQELEQKLRDYLGGFGFLGDKVTEETRRFSGGEKARLVLALIVWQRPN
LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
EQLEQMLLEGQSN"
misc_feature 3450498..3452390
/gene="yheS"
/locus_tag="SF3371"
/note="putative ABC transporter ATP-binding protein;
Provisional; Region: PRK10636"
/db_xref="CDD:236729"
gene 3452411..3453433
/gene="yheT"
/locus_tag="SF3372"
/db_xref="GeneID:1026977"
CDS 3452411..3453433
/gene="yheT"
/locus_tag="SF3372"
/note="Code: R; COG: COG0429"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="NP_709128.1"
/db_xref="GeneID:1026977"
/translation="MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFT
PYWQRLELPDGDFVDLAWSEDPAQAKHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGW
LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY
PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
AKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
LEAKSC"
misc_feature 3452453..3453424
/gene="yheT"
/locus_tag="SF3372"
/note="putative hydrolase; Provisional; Region: PRK10985"
/db_xref="CDD:182883"
gene 3453427..3453645
/gene="yheU"
/locus_tag="SF3373"
/db_xref="GeneID:1026969"
CDS 3453427..3453645
/gene="yheU"
/locus_tag="SF3373"
/note="Code: S; COG: COG3089"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709129.1"
/db_xref="GeneID:1026969"
/translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
QLQCGEAVLVWSELHETVNIMPRSQFRE"
misc_feature 3453427..3453642
/gene="yheU"
/locus_tag="SF3373"
/note="hypothetical protein; Provisional; Region:
PRK04966"
/db_xref="CDD:179903"
gene 3453699..3454568
/gene="prkB"
/locus_tag="SF3374"
/db_xref="GeneID:1026963"
CDS 3453699..3454568
/gene="prkB"
/locus_tag="SF3374"
/codon_start=1
/transl_table=11
/product="phosphoribulokinase"
/protein_id="NP_709130.1"
/db_xref="GeneID:1026963"
/translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
PLVQRLMEGKKIE"
misc_feature 3453699..3454562
/gene="prkB"
/locus_tag="SF3374"
/note="phosphoribulokinase; Provisional; Region: PRK15453"
/db_xref="CDD:237970"
misc_feature order(3453732..3453734,3453747..3453758)
/gene="prkB"
/locus_tag="SF3374"
/note="active site"
/db_xref="CDD:238987"
gene complement(3454623..3455027)
/gene="yhfA"
/locus_tag="SF3375"
/db_xref="GeneID:1027005"
CDS complement(3454623..3455027)
/gene="yhfA"
/locus_tag="SF3375"
/note="Code: S; COG: COG1765"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709131.1"
/db_xref="GeneID:1027005"
/translation="MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAA
GGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVA
RAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
misc_feature complement(3454626..3455027)
/gene="yhfA"
/locus_tag="SF3375"
/note="OsmC family protein; Region: PRK10738"
/db_xref="CDD:182688"
gene 3455329..3455961
/gene="crp"
/locus_tag="SF3376"
/db_xref="GeneID:1026956"
CDS 3455329..3455961
/gene="crp"
/locus_tag="SF3376"
/note="Code: T; COG: COG0664"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional dual regulator Crp"
/protein_id="NP_709132.1"
/db_xref="GeneID:1026956"
/translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
misc_feature 3455329..3455958
/gene="crp"
/locus_tag="SF3376"
/note="cAMP-activated global transcriptional regulator
CRP; Region: PRK11753"
/db_xref="CDD:236969"
gene 3456012..3458102
/gene="yhfK"
/locus_tag="SF3377"
/db_xref="GeneID:1026987"
CDS 3456012..3458102
/gene="yhfK"
/locus_tag="SF3377"
/note="Code: S; COG: COG1289"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709133.2"
/db_xref="GeneID:1026987"
/translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
ACCNIAGLDTPHKRFFKHLIIGASLFATCSLLTQLLLVKDVPLPFLLTGLTLVLGVTA
ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTVLHLPKSYWI
LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPESYTLTLMLITTLASY
LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
HGIWLSRKLRDSKA"
misc_feature 3456045..3458039
/gene="yhfK"
/locus_tag="SF3377"
/note="integral membrane protein, YccS/YhfK family;
Region: YCCS_YHJK; TIGR01667"
/db_xref="CDD:130728"
gene complement(3458169..3459389)
/gene="argD"
/locus_tag="SF3378"
/db_xref="GeneID:1026964"
CDS complement(3458169..3459389)
/gene="argD"
/locus_tag="SF3378"
/note="Code: E; COG: COG0160"
/codon_start=1
/transl_table=11
/product="acetylornithine aminotransferase"
/protein_id="NP_709134.1"
/db_xref="GeneID:1026964"
/translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQ
HQALLVFDEVQCGMGRTGDLFAYRYYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
IRGMGLLIGAELKPHYKGRARDFLYAGAEVGVMVLNAGPDVMRLAPSLVVEDADIDEG
MQRFAHAVAKVVGA"
misc_feature complement(3458175..3459380)
/gene="argD"
/locus_tag="SF3378"
/note="acetylornithine/succinyldiaminopimelate
transaminase; Region: argD; PRK05093"
/db_xref="CDD:179933"
misc_feature complement(order(3458625..3458627,3458703..3458708,
3458712..3458714,3458811..3458813,3458958..3458960,
3458964..3458969,3459063..3459071))
/gene="argD"
/locus_tag="SF3378"
/note="inhibitor-cofactor binding pocket [active]"
/db_xref="CDD:99735"
misc_feature complement(order(3458625..3458627,3458703..3458705,
3458712..3458714,3458811..3458813,3458964..3458969,
3459063..3459068))
/gene="argD"
/locus_tag="SF3378"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature complement(3458625..3458627)
/gene="argD"
/locus_tag="SF3378"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene complement(3459475..3460038)
/gene="pabA"
/locus_tag="SF3379"
/db_xref="GeneID:1026962"
CDS complement(3459475..3460038)
/gene="pabA"
/locus_tag="SF3379"
/note="Code: EH; COG: COG0512"
/codon_start=1
/transl_table=11
/product="para-aminobenzoate synthase component II"
/protein_id="NP_709135.1"
/db_xref="GeneID:1026962"
/translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
KTSPITHSGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQW
DLEGVQFHPESILSEQGHQLLANFLHL"
misc_feature complement(3459481..3460038)
/gene="pabA"
/locus_tag="SF3379"
/note="aminodeoxychorismate synthase component 2; Region:
PRK08007"
/db_xref="CDD:181194"
misc_feature complement(order(3459649..3459660,3459790..3459792,
3459799..3459804,3459877..3459879,3459883..3459888))
/gene="pabA"
/locus_tag="SF3379"
/note="glutamine binding [chemical binding]; other site"
/db_xref="CDD:153214"
misc_feature complement(order(3459529..3459531,3459535..3459537,
3459802..3459804))
/gene="pabA"
/locus_tag="SF3379"
/note="catalytic triad [active]"
/db_xref="CDD:153214"
gene complement(3460070..3460672)
/gene="fic"
/locus_tag="SF3380"
/db_xref="GeneID:1026980"
CDS complement(3460070..3460672)
/gene="fic"
/locus_tag="SF3380"
/note="Code: D; COG: COG2184"
/codon_start=1
/transl_table=11
/product="cell filamentation protein Fic"
/protein_id="NP_709136.1"
/db_xref="GeneID:1026980"
/translation="MSDKFGEGRDLYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA
ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
MQDLEEEGYLVGLEKAKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
misc_feature complement(3460073..3460672)
/gene="fic"
/locus_tag="SF3380"
/note="putative adenosine monophosphate-protein
transferase Fic; Region: PRK10347"
/db_xref="CDD:182396"
gene complement(3460662..3460829)
/gene="yhfG"
/locus_tag="SF3381"
/db_xref="GeneID:1026970"
CDS complement(3460662..3460829)
/gene="yhfG"
/locus_tag="SF3381"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709137.1"
/db_xref="GeneID:1026970"
/translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
RLEELRRHYER"
misc_feature complement(3460665..3460829)
/gene="yhfG"
/locus_tag="SF3381"
/note="hypothetical protein; Provisional; Region:
PRK10204"
/db_xref="CDD:182304"
gene complement(3460934..3461515)
/gene="ppiA"
/locus_tag="SF3382"
/db_xref="GeneID:1026971"
CDS complement(3460934..3461515)
/gene="ppiA"
/locus_tag="SF3382"
/note="Code: O; COG: COG0652"
/codon_start=1
/transl_table=11
/product="peptidyl-prolyl cis-trans isomerase A"
/protein_id="NP_709138.1"
/db_xref="GeneID:1026971"
/translation="MFKSTLAAMAAVFALSALSALSPAAMAAKGDPHVLLTTSAGNIE
LELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKN
EADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMD
VADKISQVPTHDVGPYQNVPSKPVVILSAKVLP"
misc_feature complement(3460937..3461515)
/gene="ppiA"
/locus_tag="SF3382"
/note="peptidylprolyl isomerase A; Region: PRK10903"
/db_xref="CDD:182824"
misc_feature complement(order(3461069..3461071,3461096..3461101,
3461123..3461125,3461147..3461164,3461267..3461269,
3461273..3461278,3461285..3461287,3461291..3461293))
/gene="ppiA"
/locus_tag="SF3382"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238901"
gene 3461786..3462967
/gene="yhfC"
/locus_tag="SF3383"
/db_xref="GeneID:1026976"
CDS 3461786..3462967
/gene="yhfC"
/locus_tag="SF3383"
/note="Code: GEPR; COG: COG0477"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_709139.1"
/db_xref="GeneID:1026976"
/translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSTA
MFILGVVSGITMSIGTFLITQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
EWYWVYACIGLVYVAIFILTFGCEFPALGKRAPKTDAPVEKEKWGIGVLFLSVAALCY
ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
LAGLAAILMYVFNTGTPVHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
TCGTIGTMLTFVVTGTIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
H"
misc_feature 3461789..3462964
/gene="yhfC"
/locus_tag="SF3383"
/note="putative transporter; Provisional; Region:
PRK03699"
/db_xref="CDD:235151"
gene 3463229..3465772
/gene="nirB"
/locus_tag="SF3384"
/db_xref="GeneID:1026541"
CDS 3463229..3465772
/gene="nirB"
/locus_tag="SF3384"
/note="Code: C; COG: COG1251"
/codon_start=1
/transl_table=11
/product="nitrite reductase subunit NirD"
/protein_id="NP_709140.2"
/db_xref="GeneID:1026541"
/translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
YAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
misc_feature 3463229..3465769
/gene="nirB"
/locus_tag="SF3384"
/note="nitrite reductase subunit NirD; Provisional;
Region: PRK14989"
/db_xref="CDD:184951"
gene 3465769..3466095
/gene="nirD"
/locus_tag="SF3385"
/db_xref="GeneID:1026973"
CDS 3465769..3466095
/gene="nirD"
/locus_tag="SF3385"
/note="Code: PR; COG: COG2146"
/codon_start=1
/transl_table=11
/product="nitrite reductase small subunit"
/protein_id="NP_709141.1"
/db_xref="GeneID:1026973"
/translation="MSQWKDICKIDDILPETGVCALLGDKQVAIFRPYHSDQVFAISN
IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
VVQLRG"
misc_feature 3465769..3466092
/gene="nirD"
/locus_tag="SF3385"
/note="nitrite reductase small subunit NirD; Region: nirD;
PRK09511"
/db_xref="CDD:181921"
gene 3466221..3467027
/gene="nirC"
/locus_tag="SF3386"
/db_xref="GeneID:1026883"
CDS 3466221..3467027
/gene="nirC"
/locus_tag="SF3386"
/note="Code: P; COG: COG2116"
/codon_start=1
/transl_table=11
/product="nitrite reductase subunit NirC"
/protein_id="NP_709142.3"
/db_xref="GeneID:1026883"
/translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG"
misc_feature 3466221..3467024
/gene="nirC"
/locus_tag="SF3386"
/note="nitrite transporter NirC; Provisional; Region:
PRK11562"
/db_xref="CDD:183200"
gene 3467046..3468419
/gene="cysG"
/locus_tag="SF3387"
/db_xref="GeneID:1026959"
CDS 3467046..3468419
/gene="cysG"
/locus_tag="SF3387"
/codon_start=1
/transl_table=11
/product="siroheme synthase"
/protein_id="NP_709143.1"
/db_xref="GeneID:1026959"
/translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDTLNQRVSEAAEARRIFCNV
VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
LRGRVKQQFATMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
LNWFSNH"
misc_feature 3467046..3468416
/gene="cysG"
/locus_tag="SF3387"
/note="siroheme synthase CysG; Region: cysG; PRK10637"
/db_xref="CDD:182606"
gene 3468666..3468833
/gene="yhfL"
/locus_tag="SF3388"
/db_xref="GeneID:1026525"
CDS 3468666..3468833
/gene="yhfL"
/locus_tag="SF3388"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709144.1"
/db_xref="GeneID:1026525"
/translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
KIIGGCGPTAQ"
misc_feature 3468666..3468827
/gene="yhfL"
/locus_tag="SF3388"
/note="Protein of unknown function (DUF4223); Region:
DUF4223; pfam13978"
/db_xref="CDD:433620"
gene 3469081..3470465
/gene="yhfM"
/locus_tag="SF3389"
/pseudo
/db_xref="GeneID:1026998"
misc_feature 3469081..3470465
/gene="yhfM"
/locus_tag="SF3389"
/note="Similar to Escherichia coli K12 amino acid/amine
transport protein gi: 2367216 (463 aa). BLAST with
identity of 99% in 462 aa. This CDS contains an in-frame
stop codon. The sequence has been checked and is believed
to be correct."
/pseudo
gene 3470486..3471508
/gene="yhfN"
/locus_tag="SF3390"
/db_xref="GeneID:1026968"
CDS 3470486..3471508
/gene="yhfN"
/locus_tag="SF3390"
/note="Code: M; COG: COG2222"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_709145.4"
/db_xref="GeneID:1026968"
/translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI
DRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY
GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV
LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP
LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER
AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY
GGLVEY"
misc_feature 3470486..3471505
/gene="yhfN"
/locus_tag="SF3390"
/note="fructoselysine 6-phosphate deglycase; Region: frlB;
PRK11382"
/db_xref="CDD:183111"
gene 3471558..3472388
/gene="yhfP"
/locus_tag="SF3391"
/db_xref="GeneID:1026517"
CDS 3471558..3472388
/gene="yhfP"
/locus_tag="SF3391"
/note="Code: G; COG: COG1082"
/codon_start=1
/transl_table=11
/product="fructoselysine 3-epimerase"
/protein_id="NP_709146.2"
/db_xref="GeneID:1026517"
/translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAIDMAKEM
NAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCN
ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
YIPGEGKMPLRELMRDIIDRGYEGYSTVELVTMYMNEPRLYARQALERFRALLPEDER
"
misc_feature 3471558..3472382
/gene="yhfP"
/locus_tag="SF3391"
/note="fructoselysine 3-epimerase; Provisional; Region:
PRK09856"
/db_xref="CDD:182116"
misc_feature order(3471663..3471671,3471672..3471674,3471774..3471779,
3471783..3471785,3471792..3471794)
/gene="yhfP"
/locus_tag="SF3391"
/note="DNA interaction; other site"
/db_xref="CDD:237986"
gene 3472385..3473170
/gene="yhfQ"
/locus_tag="SF3392"
/db_xref="GeneID:1026966"
CDS 3472385..3473170
/gene="yhfQ"
/locus_tag="SF3392"
/note="Code: G; COG: COG0524"
/codon_start=1
/transl_table=11
/product="fructoselysine 6-kinase"
/protein_id="NP_709147.1"
/db_xref="GeneID:1026966"
/translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
DFAFASAPQEDEALRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
TMGAGDSFIAGFLCGWSAGMTLPQAMAQGTACAAKTIQYHGAW"
misc_feature 3472388..3473167
/gene="yhfQ"
/locus_tag="SF3392"
/note="fructoselysine 6-kinase; Provisional; Region:
PRK09813"
/db_xref="CDD:182090"
misc_feature order(3472469..3472471,3473045..3473047,3473054..3473056)
/gene="yhfQ"
/locus_tag="SF3392"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:238915"
misc_feature order(3472880..3472882,3472958..3472960,3473039..3473041,
3473048..3473053,3473060..3473062,3473126..3473128,
3473135..3473137)
/gene="yhfQ"
/locus_tag="SF3392"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238915"
gene 3473204..3474001
/gene="yhfR"
/locus_tag="SF3393"
/db_xref="GeneID:1026530"
CDS 3473204..3474001
/gene="yhfR"
/locus_tag="SF3393"
/note="Code: K; COG: COG2188"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator FrlR"
/protein_id="NP_709148.1"
/db_xref="GeneID:1026530"
/translation="MLLLAGKRPYNPSNSFFISGSIMSATDRYSHQLLYATVRQRLLD
DIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKV
ENALLTVSGFTDFGVSQGKSTKEKVIEQERVSAAPFCEKLNIPGNSEVFHLCRVMYLD
KEPLFIDSSWIPLSRYPDFDEIYVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQA
KWLKCELGEPLFRISKIAFDQNDKPVHVSELFCRANRITLTIDNKRH"
misc_feature 3473276..3473998
/gene="yhfR"
/locus_tag="SF3393"
/note="transcriptional regulator PhoB; Region: PRK11402"
/db_xref="CDD:183118"
gene complement(3474161..3475246)
/gene="yhfS"
/locus_tag="SF3394"
/db_xref="GeneID:1024618"
CDS complement(3474161..3475246)
/gene="yhfS"
/locus_tag="SF3394"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709149.1"
/db_xref="GeneID:1024618"
/translation="MKTFPLQSLTLAEAQQKQFALVDTICRHFPGSEFLAGGDLGLTP
SLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP
TTRVIIEQMGLTLITADFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVISRIRA
TLYSGGSQIQGSQALEVLRGLVFAPVMHAVQAGVSERLLALLNGGAVAEVKSAVIANA
QSKVLIVEFHQLIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQLE
HCAIRINPNRSGEETVLRILRESIASI"
misc_feature complement(<3474530..3475024)
/gene="yhfS"
/locus_tag="SF3394"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl18945"
/db_xref="CDD:450240"
misc_feature complement(order(3474659..3474661,3474668..3474670,
3474728..3474730,3474737..3474739,3474824..3474826,
3475010..3475012,3475019..3475024))
/gene="yhfS"
/locus_tag="SF3394"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99738"
misc_feature complement(3474659..3474661)
/gene="yhfS"
/locus_tag="SF3394"
/note="catalytic residue [active]"
/db_xref="CDD:99738"
gene complement(3475258..3476562)
/gene="yhfT"
/locus_tag="SF3395"
/db_xref="GeneID:1026871"
CDS complement(3475258..3476562)
/gene="yhfT"
/locus_tag="SF3395"
/codon_start=1
/transl_table=11
/product="transport system permease"
/protein_id="NP_709150.1"
/db_xref="GeneID:1026871"
/translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIHPILPQLIEGYM
NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLV
AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
misc_feature complement(3475270..3476547)
/gene="yhfT"
/locus_tag="SF3395"
/note="Protein of unknown function; Region: YhfT;
pfam10797"
/db_xref="CDD:431502"
gene complement(3476574..3476966)
/gene="yhfU"
/locus_tag="SF3396"
/db_xref="GeneID:1024062"
CDS complement(3476574..3476966)
/gene="yhfU"
/locus_tag="SF3396"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709151.1"
/db_xref="GeneID:1024062"
/translation="MKIPLNFSNKDRLMKKIGVAGLQREQIKKTIEATAPGCFEVFIH
NDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAK
MIAEGKVAFGLSVEHVEHAIPMLINHLK"
misc_feature complement(3476580..3476924)
/gene="yhfU"
/locus_tag="SF3396"
/note="Protein of unknown function DUF2620; Region:
DUF2620; pfam10941"
/db_xref="CDD:431548"
gene complement(3476938..3477816)
/locus_tag="SF3397"
/pseudogene="unknown"
/db_xref="GeneID:1026539"
gene complement(3477813..3479039)
/gene="yhfW"
/locus_tag="SF3398"
/db_xref="GeneID:1026528"
CDS complement(3477813..3479039)
/gene="yhfW"
/locus_tag="SF3398"
/note="Code: G; COG: COG1015"
/codon_start=1
/transl_table=11
/product="mutase"
/protein_id="NP_709153.1"
/db_xref="GeneID:1026528"
/translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
LPTLEKLGLINTLGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
PFRDVIDRVEQALVSAGWQVERRGDDLQFLSVNQAVAIGDNLEADLGQVYNITANLSV
ISFDDAIKIGRIVRDQVQVGRVITFGGLLTNSQRILDAAESKEGRFIGINAPRSGAYD
NGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMD
ITLDEFNTHPTAFICINIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLV
VMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRTTLSDVGATVCEFFRAPPPQ
NGRSFLSSLRFAGDTL"
misc_feature complement(3477822..3479039)
/gene="yhfW"
/locus_tag="SF3398"
/note="putative mutase; Provisional; Region: PRK12383"
/db_xref="CDD:237085"
misc_feature complement(order(3477990..3477992,3478023..3478028,
3478134..3478136,3478152..3478154,3478284..3478286,
3478368..3478370,3478380..3478382,3478485..3478487,
3478491..3478493,3478497..3478499,3478587..3478589,
3478593..3478595,3478599..3478601,3478605..3478607,
3478788..3478790,3479010..3479012))
/gene="yhfW"
/locus_tag="SF3398"
/note="active site"
/db_xref="CDD:293733"
misc_feature complement(order(3477990..3477992,3478023..3478025,
3478134..3478136,3478152..3478154,3478284..3478286,
3478380..3478382,3478485..3478487,3478491..3478493,
3478497..3478499,3478587..3478589,3478599..3478601,
3478605..3478607,3478788..3478790))
/gene="yhfW"
/locus_tag="SF3398"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:293733"
gene complement(3479040..3480203)
/gene="yhfX"
/locus_tag="SF3399"
/db_xref="GeneID:1023385"
CDS complement(3479040..3480203)
/gene="yhfX"
/locus_tag="SF3399"
/note="Code: E; COG: COG3457"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709154.1"
/db_xref="GeneID:1023385"
/translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKR
LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQ
GHLVQIPCHQVADAVEQGTDIITVFTLDKAREVSAAAVKAGRVQPVLLKVYSDDDFLY
PGQESGFVQHSLHEVIAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLVQAR
DQLAKSGIAIEQLNVPSATSCTSLPLLAEYGATHAEPGHALTGTIPANQQGDQPERIA
MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
PLAGEYPVSSAVVLCFRTQIFVTRSDVVLVSGIQRGEPEIVGRYDSLGNPLEA"
misc_feature complement(3479058..3480203)
/gene="yhfX"
/locus_tag="SF3399"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme yhfX; Region: PLPDE_III_yhfX_like; cd06811"
/db_xref="CDD:143486"
misc_feature complement(order(3479085..3479087,3479307..3479312,
3479319..3479321,3479325..3479327,3479331..3479333,
3479343..3479354,3479709..3479720,3479802..3479804,
3479814..3479816,3479823..3479825,3479862..3479864,
3479922..3479924,3479940..3479945,3479949..3479954,
3480015..3480017,3480021..3480023,3480120..3480122))
/gene="yhfX"
/locus_tag="SF3399"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143486"
misc_feature complement(order(3479310..3479312,3479433..3479444,
3479496..3479501,3479625..3479627,3479715..3479717,
3479751..3479753,3479883..3479885,3479958..3479960,
3480021..3480023,3480027..3480029))
/gene="yhfX"
/locus_tag="SF3399"
/note="active site"
/db_xref="CDD:143486"
misc_feature complement(order(3479433..3479444,3479496..3479501,
3479625..3479627,3479751..3479753,3479883..3479885,
3479958..3479960,3480021..3480023,3480027..3480029))
/gene="yhfX"
/locus_tag="SF3399"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143486"
misc_feature complement(order(3479433..3479435,3479625..3479627,
3479715..3479717,3480021..3480023))
/gene="yhfX"
/locus_tag="SF3399"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143486"
misc_feature complement(3480021..3480023)
/gene="yhfX"
/locus_tag="SF3399"
/note="catalytic residue [active]"
/db_xref="CDD:143486"
gene complement(3480287..3480691)
/gene="yhfY"
/locus_tag="SF3400"
/db_xref="GeneID:1026520"
CDS complement(3480287..3480691)
/gene="yhfY"
/locus_tag="SF3400"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709155.1"
/db_xref="GeneID:1026520"
/translation="MGNRNPVIKRKASDMETRLNLLCEAGVIDKDVCKGMMQVVNVLE
KECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQE
LLKEFALEVNPCEEGYFLANLYGLWMAANEEV"
misc_feature complement(<3480317..>3480580)
/gene="yhfY"
/locus_tag="SF3400"
/note="Transcriptional antiterminator [Transcription];
Region: BglG; COG3711"
/db_xref="CDD:442925"
gene complement(3480666..3481571)
/gene="yhfZ"
/locus_tag="SF3401"
/db_xref="GeneID:1026532"
CDS complement(3480666..3481571)
/gene="yhfZ"
/locus_tag="SF3401"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709156.3"
/db_xref="GeneID:1026532"
/translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE
LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESL
QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
RAVVDKHALLAHQQRVVSGEQEPSY"
misc_feature complement(3480669..3481565)
/gene="yhfZ"
/locus_tag="SF3401"
/note="GntR family transcriptional regulator YhfZ; Region:
YhfZ_full; NF041241"
/db_xref="CDD:469143"
gene complement(3481841..3482845)
/gene="trpS"
/locus_tag="SF3402"
/db_xref="GeneID:1027582"
CDS complement(3481841..3482845)
/gene="trpS"
/locus_tag="SF3402"
/note="Code: J; COG: COG0180"
/codon_start=1
/transl_table=11
/product="tryptophanyl-tRNA synthetase"
/protein_id="NP_709157.1"
/db_xref="GeneID:1027582"
/translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
ELSRMTQFKDKSARYAENINAGLFGYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
"
misc_feature complement(3481847..3482839)
/gene="trpS"
/locus_tag="SF3402"
/note="tryptophanyl-tRNA synthetase; Reviewed; Region:
PRK00927"
/db_xref="CDD:234866"
gene complement(3482838..3483596)
/gene="gph"
/locus_tag="SF3403"
/db_xref="GeneID:1025952"
CDS complement(3482838..3483596)
/gene="gph"
/locus_tag="SF3403"
/note="Code: R; COG: COG0546"
/codon_start=1
/transl_table=11
/product="phosphoglycolate phosphatase"
/protein_id="NP_709158.1"
/db_xref="GeneID:1025952"
/translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
RVITWIGNGADVLMERALTWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
GEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
misc_feature complement(3482865..3483593)
/gene="gph"
/locus_tag="SF3403"
/note="N-acetylmuramic acid 6-phosphate phosphatase MupP;
Region: PRK13222"
/db_xref="CDD:237310"
misc_feature complement(order(3483009..3483014,3483021..3483026,
3483096..3483098,3483192..3483197,3483546..3483560))
/gene="gph"
/locus_tag="SF3403"
/note="active site"
/db_xref="CDD:319854"
gene complement(3483589..3484266)
/gene="rpe"
/locus_tag="SF3404"
/db_xref="GeneID:1026889"
CDS complement(3483589..3484266)
/gene="rpe"
/locus_tag="SF3404"
/note="Code: G; COG: COG0036"
/codon_start=1
/transl_table=11
/product="ribulose-phosphate 3-epimerase"
/protein_id="NP_709159.1"
/db_xref="GeneID:1026889"
/translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
LAKVSHE"
misc_feature complement(3483601..3484257)
/gene="rpe"
/locus_tag="SF3404"
/note="Pentose-5-phosphate-3-epimerase [Carbohydrate
transport and metabolism]; Region: Rpe; COG0036"
/db_xref="CDD:439806"
gene complement(3484284..3485120)
/gene="dam"
/locus_tag="SF3405"
/db_xref="GeneID:1026531"
CDS complement(3484284..3485120)
/gene="dam"
/locus_tag="SF3405"
/note="Code: L; COG: COG0338"
/codon_start=1
/transl_table=11
/product="DNA adenine methylase"
/protein_id="NP_709160.1"
/db_xref="GeneID:1026531"
/translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
YCESYADSMERADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
KK"
misc_feature complement(3484308..3485120)
/gene="dam"
/locus_tag="SF3405"
/note="adenine-specific DNA-methyltransferase; Region:
PRK10904"
/db_xref="CDD:182825"
gene complement(3485227..3486519)
/gene="damX"
/locus_tag="SF3406"
/db_xref="GeneID:1023869"
CDS complement(3485227..3486519)
/gene="damX"
/locus_tag="SF3406"
/note="Code: S; COG: COG3266"
/codon_start=1
/transl_table=11
/product="cell division protein DamX"
/protein_id="NP_709161.1"
/db_xref="GeneID:1023869"
/translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ
YMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPG
TTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVA
VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPVRQQAVIEPKKPQATVKTEP
KPVAQTPKRTEPEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGK
TAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVS
GVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
misc_feature complement(3485230..3486207)
/gene="damX"
/locus_tag="SF3406"
/note="cell division protein DamX; Validated; Region:
PRK10905"
/db_xref="CDD:236792"
gene complement(3486611..3487699)
/gene="aroB"
/locus_tag="SF3407"
/db_xref="GeneID:1023505"
CDS complement(3486611..3487699)
/gene="aroB"
/locus_tag="SF3407"
/note="Code: E; COG: COG0337"
/codon_start=1
/transl_table=11
/product="3-dehydroquinate synthase"
/protein_id="NP_709162.1"
/db_xref="GeneID:1023505"
/translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTSET
LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
RTSERLGQFSSAETQRIITLLTRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEMRLIL
PLAIGKSKVRSGVSHELVLNAIADCQSA"
misc_feature complement(3486632..3487699)
/gene="aroB"
/locus_tag="SF3407"
/note="3-dehydroquinate synthetase [Amino acid transport
and metabolism]; Region: AroB; COG0337"
/db_xref="CDD:440106"
gene complement(3487756..3488478)
/gene="aroK"
/locus_tag="SF3408"
/db_xref="GeneID:1023789"
CDS complement(3487756..3488478)
/gene="aroK"
/locus_tag="SF3408"
/note="Code: E; COG: COG0703"
/codon_start=1
/transl_table=11
/product="shikimate kinase I"
/protein_id="NP_709163.4"
/db_xref="GeneID:1023789"
/translation="MVARQRACSDQICRGMGDLFSCQTRWSIEIIFSLTLAISYEVSV
HVLRRSLSEAGLSLTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDS
DQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNR
LSARGVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVT
IRTDDQSAKVVANQIIHMLESN"
misc_feature complement(3487759..3488277)
/gene="aroK"
/locus_tag="SF3408"
/note="shikimate kinase AroK; Region: aroK; PRK05057"
/db_xref="CDD:235335"
misc_feature complement(order(3487918..3487920,3487939..3487941,
3488221..3488238))
/gene="aroK"
/locus_tag="SF3408"
/note="ADP binding site [chemical binding]; other site"
/db_xref="CDD:238260"
misc_feature complement(order(3488170..3488172,3488176..3488178,
3488224..3488226))
/gene="aroK"
/locus_tag="SF3408"
/note="magnesium binding site [ion binding]; other site"
/db_xref="CDD:238260"
misc_feature complement(order(3487858..3487860,3488029..3488037,
3488089..3488091,3488098..3488100,3488170..3488172))
/gene="aroK"
/locus_tag="SF3408"
/note="putative shikimate binding site [active]"
/db_xref="CDD:238260"
gene complement(3488678..3489916)
/gene="hofQ"
/locus_tag="SF3409"
/db_xref="GeneID:1026535"
CDS complement(3488678..3489916)
/gene="hofQ"
/locus_tag="SF3409"
/note="Code: N; COG: COG1450"
/codon_start=1
/transl_table=11
/product="porin"
/protein_id="NP_709164.2"
/db_xref="GeneID:1026535"
/translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNDNIA
RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
QESEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
KEDERRELVVFITPRLVSSE"
misc_feature complement(3488681..3489838)
/gene="hofQ"
/locus_tag="SF3409"
/note="outer membrane porin HofQ; Provisional; Region:
hofQ; PRK10560"
/db_xref="CDD:182549"
gene complement(3489828..3490273)
/gene="yrfA"
/locus_tag="SF3410"
/pseudo
/db_xref="GeneID:1023388"
misc_feature complement(3489828..3490273)
/gene="yrfA"
/locus_tag="SF3410"
/note="Similar to Escherichia coli K12 conserved
hypothetical protein gi: 1789794 (148 aa). BLAST with
identity of 99% in 148 aa. This CDS ontains frameshift.
The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(3490224..3490595)
/gene="yrfB"
/locus_tag="SF3411"
/db_xref="GeneID:1023870"
CDS complement(3490224..3490595)
/gene="yrfB"
/locus_tag="SF3411"
/note="Code: N; COG: COG2165"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709165.1"
/db_xref="GeneID:1023870"
/translation="MLMLVTLIFLSSTHHEERDALIRLRASHHQQWAALYRLVDTTPF
SEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNVSVSRF
SLSVEGDDLLFTLQLEMPHEG"
gene complement(3490648..3491187)
/gene="yrfC"
/locus_tag="SF3412"
/db_xref="GeneID:1025320"
CDS complement(3490648..3491187)
/gene="yrfC"
/locus_tag="SF3412"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709166.1"
/db_xref="GeneID:1025320"
/translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEAL
AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
GRWQFEYQLTRKVSDEHVL"
misc_feature complement(3490657..3491175)
/gene="yrfC"
/locus_tag="SF3412"
/note="Type IV pilus assembly protein PilN [Cell motility,
Extracellular structures]; Region: PilN; COG3166"
/db_xref="CDD:442399"
gene complement(3491187..3491993)
/gene="yrfD"
/locus_tag="SF3413"
/db_xref="GeneID:1023791"
CDS complement(3491187..3491993)
/gene="yrfD"
/locus_tag="SF3413"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709167.2"
/db_xref="GeneID:1023791"
/translation="MTGDKEIITMTFKIWQIGLHLQQQEAAAVAIVRGAKECFLQRWW
RLPLAHDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSL
GEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLR
VHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELA
AALSVDPDSVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY"
misc_feature complement(3491202..3491912)
/gene="yrfD"
/locus_tag="SF3413"
/note="Type IV pilus assembly protein, ATPase PilM [Cell
motility, Extracellular structures]; Region: PilM;
COG4972"
/db_xref="CDD:443997"
gene 3492086..3494638
/gene="mrcA"
/locus_tag="SF3414"
/db_xref="GeneID:1026491"
CDS 3492086..3494638
/gene="mrcA"
/locus_tag="SF3414"
/note="Code: M; COG: COG0744"
/codon_start=1
/transl_table=11
/product="penicillin-binding protein 1a"
/protein_id="NP_709168.4"
/db_xref="GeneID:1026491"
/translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVVTLKDVRL
QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
RAASVALFSGHASQGASTITQQLARNFFLSPERTMMRKIKEVFLAIRIEQLLTKDEIL
ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
KITDTLKALPTYGPLLPAAVTSANPQGATAMLADGSTVALSMEGVRWARPYRSDTQQG
PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
misc_feature 3492086..3494635
/gene="mrcA"
/locus_tag="SF3414"
/note="penicillin-binding protein 1a; Provisional; Region:
mrcA; PRK11636"
/db_xref="CDD:183248"
gene complement(3494803..3495363)
/gene="nudE"
/locus_tag="SF3415"
/db_xref="GeneID:1026516"
CDS complement(3494803..3495363)
/gene="nudE"
/locus_tag="SF3415"
/note="Code: LR; COG: COG0494"
/codon_start=1
/transl_table=11
/product="ADP compounds hydrolase NudE"
/protein_id="NP_709169.1"
/db_xref="GeneID:1026516"
/translation="MNKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
DPDFNEARNVSALFLVREWLKGQGRV"
misc_feature complement(3494812..3495363)
/gene="nudE"
/locus_tag="SF3415"
/note="adenosine nucleotide hydrolase NudE; Provisional;
Region: nudE; PRK11762"
/db_xref="CDD:183303"
gene 3495683..3497818
/gene="yrfF"
/locus_tag="SF3416"
/db_xref="GeneID:1026515"
CDS 3495683..3497818
/gene="yrfF"
/locus_tag="SF3416"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="NP_709170.1"
/db_xref="GeneID:1026515"
/translation="MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRK
LTPEERSAVENYLESLTQVLQVPGPTEASAAPISLALNAESNNVMMLTHAITRYGIST
DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
QINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPL
QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL
TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA
EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
HRTRMMEIQAYYESCLNPQLITPSESLIE"
misc_feature 3495737..3497797
/gene="yrfF"
/locus_tag="SF3416"
/note="Intracellular growth attenuator protein IgaA;
Region: IgaA; pfam07095"
/db_xref="CDD:429290"
gene 3497838..3498551
/gene="yrfG"
/locus_tag="SF3417"
/db_xref="GeneID:1026872"
CDS 3497838..3498551
/gene="yrfG"
/locus_tag="SF3417"
/note="Code: R; COG: COG1011"
/codon_start=1
/transl_table=11
/product="GMP/IMP nucleotidase"
/protein_id="NP_709171.1"
/db_xref="GeneID:1026872"
/translation="MLPCRANCFTLEISLMHINIAWQDVDTVLLDMDGTLLDLAFDNY
FWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTE
MGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF
GYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEK
QYQRHPSLNDYRRLIPSLM"
misc_feature 3497883..3498548
/gene="yrfG"
/locus_tag="SF3417"
/note="GMP/IMP nucleotidase; Provisional; Region:
PRK14988"
/db_xref="CDD:237882"
misc_feature order(3497928..3497942,3498228..3498233,3498327..3498329,
3498399..3498404,3498411..3498416)
/gene="yrfG"
/locus_tag="SF3417"
/note="active site"
/db_xref="CDD:319763"
gene 3498562..3498963
/gene="yrfH"
/locus_tag="SF3418"
/db_xref="GeneID:1026506"
CDS 3498562..3498963
/gene="yrfH"
/locus_tag="SF3418"
/note="Code: J; COG: COG1188"
/codon_start=1
/transl_table=11
/product="ribosome-associated heat shock protein Hsp15"
/protein_id="NP_709172.1"
/db_xref="GeneID:1026506"
/translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMAR
KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
misc_feature 3498562..3498960
/gene="yrfH"
/locus_tag="SF3418"
/note="ribosome-associated heat shock protein Hsp15;
Provisional; Region: PRK10348"
/db_xref="CDD:182397"
misc_feature order(3498589..3498591,3498625..3498630,3498634..3498639,
3498643..3498648,3498655..3498660,3498664..3498666,
3498685..3498687,3498688..3498705,3498709..3498711)
/gene="yrfH"
/locus_tag="SF3418"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:238095"
gene 3498988..3499857
/gene="hslO"
/locus_tag="SF3419"
/db_xref="GeneID:1026490"
CDS 3498988..3499857
/gene="hslO"
/locus_tag="SF3419"
/note="Code: O; COG: COG1281"
/codon_start=1
/transl_table=11
/product="heat shock protein 33"
/protein_id="NP_709173.2"
/db_xref="GeneID:1026490"
/translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
VDGKPAAGGMLLQVMPAQNTQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
TVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
IAEIRNNASPADP"
misc_feature 3498994..3499842
/gene="hslO"
/locus_tag="SF3419"
/note="Hsp33 family molecular chaperone HslO; Region:
hslO; PRK00114"
/db_xref="CDD:234643"
gene complement(3500001..3501725)
/gene="yhgE"
/locus_tag="SF3420"
/db_xref="GeneID:1026545"
CDS complement(3500001..3501725)
/gene="yhgE"
/locus_tag="SF3420"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="NP_709174.1"
/db_xref="GeneID:1026545"
/translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
PATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWD
FGCYLLLMAMLLLPWIQQSLRIRNGSSRYSYFYQSVWHNVLILLVIFLSNGLTWLVLL
LWGELFKLVGITFFNTLFFATDWFMYLTFGLVTALAVILARTQSRLIDSIQKLFTLIA
TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
PWTGPLRCLIKTALLVAPLYVFVATWGLWLRVAQYGWTVDRLQGALAELVLLVWSLGY
FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKV
FAENVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRDLTVDGE
TLEINLSK"
misc_feature complement(3500478..3501578)
/gene="yhgE"
/locus_tag="SF3420"
/note="Domain of unknown function (DUF4153); Region:
DUF4153; pfam13687"
/db_xref="CDD:463956"
gene complement(3501801..3501932)
/locus_tag="SF3421"
/db_xref="GeneID:1023442"
CDS complement(3501801..3501932)
/locus_tag="SF3421"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709175.1"
/db_xref="GeneID:1023442"
/translation="MENVLKRLNLGLYGGNIVSGIAFLNEIDANSTGKVSIHHANFF"
gene 3502104..3503726
/gene="pckA"
/locus_tag="SF3422"
/db_xref="GeneID:1026485"
CDS 3502104..3503726
/gene="pckA"
/locus_tag="SF3422"
/note="Code: C; COG: COG1866"
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate carboxykinase"
/protein_id="NP_709176.2"
/db_xref="GeneID:1026485"
/translation="MRVNNGLPPQELEAYGISNVHDIVYNPSYDLLYQEELDPSLTGY
ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
misc_feature 3502110..3503723
/gene="pckA"
/locus_tag="SF3422"
/note="phosphoenolpyruvate carboxykinase (ATP); Region:
pckA; TIGR00224"
/db_xref="CDD:161774"
misc_feature order(3502296..3502298,3502722..3502724,3502728..3502730,
3502737..3502742,3502797..3502799,3502851..3502871,
3502905..3502910,3502959..3502961,3502965..3502967,
3502992..3502994,3503100..3503102,3503448..3503450,
3503457..3503459,3503466..3503468)
/gene="pckA"
/locus_tag="SF3422"
/note="active site"
/db_xref="CDD:238270"
misc_feature order(3502296..3502298,3502722..3502724,3502728..3502730,
3502737..3502742,3502959..3502961,3503100..3503102)
/gene="pckA"
/locus_tag="SF3422"
/note="substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:238270"
misc_feature order(3502740..3502742,3502797..3502799,3502866..3502868,
3502905..3502910,3502959..3502961)
/gene="pckA"
/locus_tag="SF3422"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238270"
misc_feature order(3502851..3502871,3502992..3502994,3503448..3503450,
3503466..3503468)
/gene="pckA"
/locus_tag="SF3422"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:238270"
gene complement(3503802..3505154)
/gene="envZ"
/locus_tag="SF3423"
/db_xref="GeneID:1026481"
CDS complement(3503802..3505154)
/gene="envZ"
/locus_tag="SF3423"
/note="Code: T; COG: COG0642"
/codon_start=1
/transl_table=11
/product="osmolarity sensor protein"
/protein_id="NP_709177.1"
/db_xref="GeneID:1026481"
/translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
"
misc_feature complement(3503838..3505145)
/gene="envZ"
/locus_tag="SF3423"
/note="osmolarity sensor protein; Provisional; Region:
envZ; PRK09467"
/db_xref="CDD:236531"
gene complement(3505151..3505870)
/gene="ompR"
/locus_tag="SF3424"
/db_xref="GeneID:1025367"
CDS complement(3505151..3505870)
/gene="ompR"
/locus_tag="SF3424"
/note="Code: TK; COG: COG0745"
/codon_start=1
/transl_table=11
/product="osmolarity response regulator"
/protein_id="NP_709178.2"
/db_xref="GeneID:1025367"
/translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
PRYIQTVWGLGYVFVPDGSKA"
misc_feature complement(3505157..3505870)
/gene="ompR"
/locus_tag="SF3424"
/note="osmolarity response regulator; Provisional; Region:
ompR; PRK09468"
/db_xref="CDD:181883"
gene 3506062..3506574
/gene="greB"
/locus_tag="SF3425"
/db_xref="GeneID:1026534"
CDS 3506062..3506574
/gene="greB"
/locus_tag="SF3425"
/note="Code: K; COG: COG0782"
/codon_start=1
/transl_table=11
/product="transcription elongation factor and transcript
cleavage factor"
/protein_id="NP_709179.3"
/db_xref="GeneID:1026534"
/translation="MRIIKQTKGINEMKTPLVTREGYEKLKQELNYLWREERPEVTKK
VTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAW
VEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEANW
YVNAIEYVKP"
misc_feature 3506095..3506565
/gene="greB"
/locus_tag="SF3425"
/note="transcription elongation factor GreB; Reviewed;
Region: greB; PRK01885"
/db_xref="CDD:179345"
gene 3506770..3508992
/gene="yhgF"
/locus_tag="SF3426"
/db_xref="GeneID:1026514"
CDS 3506770..3508992
/gene="yhgF"
/locus_tag="SF3426"
/note="Code: R; COG: COG2183"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709180.2"
/db_xref="GeneID:1026514"
/translation="MPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSI
SEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPS
HTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVST
VVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKE
SYCEQIIMDHLGLRLNNAPADSWRKSVVSWTWRIKVLMHLETELMGTVRERAEDEAIN
VFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKA
AMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSA
SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL
DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN
LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA
VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI
ALTMRLDEQPGETNSRRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR
"
misc_feature 3506773..3508851
/gene="yhgF"
/locus_tag="SF3426"
/note="Transcriptional accessory protein Tex/SPT6
[Transcription]; Region: Tex; COG2183"
/db_xref="CDD:441786"
gene 3509430..3509657
/gene="feoA"
/locus_tag="SF3427"
/db_xref="GeneID:1026492"
CDS 3509430..3509657
/gene="feoA"
/locus_tag="SF3427"
/note="Code: P; COG: COG1918"
/codon_start=1
/transl_table=11
/product="ferrous iron transport protein A"
/protein_id="NP_709181.1"
/db_xref="GeneID:1026492"
/translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFDVVRVAP
LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
misc_feature 3509430..3509651
/gene="feoA"
/locus_tag="SF3427"
/note="ferrous iron transporter A; Region: feoA; PRK09555"
/db_xref="CDD:181949"
gene 3509674..3511995
/gene="feoB"
/locus_tag="SF3428"
/db_xref="GeneID:1026508"
CDS 3509674..3511995
/gene="feoB"
/locus_tag="SF3428"
/note="Code: P; COG: COG0370"
/codon_start=1
/transl_table=11
/product="ferrous iron transport protein B"
/protein_id="NP_709182.2"
/db_xref="GeneID:1026508"
/translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
AGEASQHLDATLARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFNVGSVALFVHGIQWIGYTLHFPDW
LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAVDETWQSL
KDTFSLSVLMNPIEASKGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVAIG
LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
misc_feature 3509674..3511992
/gene="feoB"
/locus_tag="SF3428"
/note="Fe(2+) transporter permease subunit FeoB; Region:
feoB; PRK09554"
/db_xref="CDD:236563"
misc_feature 3509701..3509724
/gene="feoB"
/locus_tag="SF3428"
/note="G1 box; other site"
/db_xref="CDD:206667"
misc_feature order(3509710..3509712,3509716..3509727,3510031..3510036,
3510040..3510042,3510118..3510126)
/gene="feoB"
/locus_tag="SF3428"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206667"
misc_feature 3509779..3509793
/gene="feoB"
/locus_tag="SF3428"
/note="Switch I region; other site"
/db_xref="CDD:206667"
misc_feature 3509782..3509784
/gene="feoB"
/locus_tag="SF3428"
/note="G2 box; other site"
/db_xref="CDD:206667"
misc_feature 3509839..3509850
/gene="feoB"
/locus_tag="SF3428"
/note="G3 box; other site"
/db_xref="CDD:206667"
misc_feature order(3509848..3509874,3509887..3509916,3509926..3509931)
/gene="feoB"
/locus_tag="SF3428"
/note="Switch II region; other site"
/db_xref="CDD:206667"
misc_feature 3510031..3510042
/gene="feoB"
/locus_tag="SF3428"
/note="G4 box; other site"
/db_xref="CDD:206667"
misc_feature 3510118..3510126
/gene="feoB"
/locus_tag="SF3428"
/note="G5 box; other site"
/db_xref="CDD:206667"
gene 3511995..3512231
/gene="yhgG"
/locus_tag="SF3429"
/db_xref="GeneID:1026512"
CDS 3511995..3512231
/gene="yhgG"
/locus_tag="SF3429"
/codon_start=1
/transl_table=11
/product="ferrous iron transport protein FeoC"
/protein_id="NP_709183.2"
/db_xref="GeneID:1026512"
/translation="MASLIQVRDLLALRGRMEATQISQTLNTPQPMINAMLQQLESMG
KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
misc_feature 3511995..3512228
/gene="yhgG"
/locus_tag="SF3429"
/note="[Fe-S]-dependent transcriptional repressor FeoC;
Region: PRK15431"
/db_xref="CDD:185329"
gene 3512434..3513321
/gene="yhgA"
/locus_tag="SF3430"
/db_xref="GeneID:1026509"
CDS 3512434..3513321
/gene="yhgA"
/locus_tag="SF3430"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="NP_709184.1"
/db_xref="GeneID:1026509"
/translation="MSKKQSSTPHDALFKLFLRQPETARDFLAFHLPAPIHALCDMKT
LKLESRSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQ
TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLADI
MRFTGLSEEELAAASRLAP"
misc_feature 3512434..3513309
/gene="yhgA"
/locus_tag="SF3430"
/note="recombination-promoting nuclease RpnA; Region:
PRK09857"
/db_xref="CDD:182117"
mobile_element 3513306..3514636
/mobile_element_type="insertion sequence:IS2"
gene 3513352..3513762
/locus_tag="SF3431"
/db_xref="GeneID:1026523"
CDS 3513352..3513762
/locus_tag="SF3431"
/note="Code: L; COG: COG2963"
/codon_start=1
/transl_table=11
/product="IS2 repressor TnpA"
/protein_id="NP_709185.3"
/db_xref="GeneID:1026523"
/translation="MIVLILVFRLVIGVQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG
MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL
GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE"
misc_feature 3513397..3513759
/locus_tag="SF3431"
/note="IS2 repressor TnpA; Reviewed; Region: PRK09413"
/db_xref="CDD:181833"
gene 3513720..3514625
/locus_tag="SF3432"
/db_xref="GeneID:1026521"
CDS 3513720..3514625
/locus_tag="SF3432"
/note="Code: L; COG: COG2801"
/codon_start=1
/transl_table=11
/product="IS2 transposase TnpB"
/protein_id="NP_709186.1"
/db_xref="GeneID:1026521"
/translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGPRS
RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE
PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL
GYRSPREYLRQRACNGLSDNRCLEI"
misc_feature 3513720..3514622
/locus_tag="SF3432"
/note="IS2 transposase TnpB; Reviewed; Region: PRK09409"
/db_xref="CDD:181829"
gene 3514721..3514990
/locus_tag="SF3433"
/db_xref="GeneID:1026522"
CDS 3514721..3514990
/locus_tag="SF3433"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709187.1"
/db_xref="GeneID:1026522"
/translation="MQTVKLRQQGGAMIVTIPRDLAIDLGWSPGTELTVEKKGDSVNL
RATEHKPRGRLTVAQLLSQIDESEITELNQSTEGWAEGKKGNEAW"
misc_feature 3514721..3514987
/locus_tag="SF3433"
/note="Antitoxin component MazE of the MazEF
toxin-antitoxin module [Defense mechanisms]; Region: MazE;
COG2336"
/db_xref="CDD:441907"
gene 3514984..3515349
/locus_tag="SF3434"
/db_xref="GeneID:1026487"
CDS 3514984..3515349
/locus_tag="SF3434"
/note="Code: T; COG: COG2337"
/codon_start=1
/transl_table=11
/product="PemK protein"
/protein_id="NP_709188.1"
/db_xref="GeneID:1026487"
/translation="MVKARTPHRGEIWYFNPDPVAGHELQGPHYCIVVTDKKLNNVLK
VAMCCPISTGANAARSTGVTVNVLPRDTQTGNLHGVVLCHQLKAVDLIARGAKFHTVA
DEKLISEVISKLVNLIDPQ"
misc_feature 3514999..3515343
/locus_tag="SF3434"
/note="mRNA-degrading endonuclease MazF, toxin component
of the MazEF toxin-antitoxin module [Defense mechanisms];
Region: MazF; COG2337"
/db_xref="CDD:441908"
gene complement(3515350..3516138)
/gene="bioH"
/locus_tag="SF3435"
/db_xref="GeneID:1026527"
CDS complement(3515350..3516138)
/gene="bioH"
/locus_tag="SF3435"
/note="Code: R; COG: COG0596"
/codon_start=1
/transl_table=11
/product="carboxylesterase BioH"
/protein_id="NP_709189.2"
/db_xref="GeneID:1026527"
/translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
VDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML
DKLWPHSESYIFAKAAHAPFISHPVEFCHLLVALKQRVLVVSES"
misc_feature complement(3515371..3516138)
/gene="bioH"
/locus_tag="SF3435"
/note="pimeloyl-ACP methyl ester esterase BioH; Region:
PRK10349"
/db_xref="CDD:137836"
gene 3516128..3516859
/gene="yhgH"
/locus_tag="SF3436"
/db_xref="GeneID:1023930"
CDS 3516128..3516859
/gene="yhgH"
/locus_tag="SF3436"
/note="Code: R; COG: COG1040"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709190.4"
/db_xref="GeneID:1023930"
/translation="MLFIRYCSLLTYKDEHMLTVPGLCWLCRMPLALGHWGICSVCSR
ATRTDKTLCPQCGLPATHSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRR
SEIASALSRLLLLEVLHARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRW
LHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGST
VAEIAQLLLRNGAATVQVWCLCRTL"
misc_feature 3516176..3516856
/gene="yhgH"
/locus_tag="SF3436"
/note="DNA utilization protein GntX; Provisional; Region:
PRK11595"
/db_xref="CDD:183221"
gene 3516918..3517493
/gene="yhgI"
/locus_tag="SF3437"
/db_xref="GeneID:1026524"
CDS 3516918..3517493
/gene="yhgI"
/locus_tag="SF3437"
/codon_start=1
/transl_table=11
/product="Fe/S biogenesis protein NfuA"
/protein_id="NP_709191.1"
/db_xref="GeneID:1026524"
/translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
misc_feature 3516918..3517490
/gene="yhgI"
/locus_tag="SF3437"
/note="iron-sulfur cluster biogenesis protein NfuA;
Region: PRK11190"
/db_xref="CDD:183027"
gene 3517854..3519170
/gene="gntT"
/locus_tag="SF3438"
/db_xref="GeneID:1026529"
CDS 3517854..3519170
/gene="gntT"
/locus_tag="SF3438"
/note="Code: GE; COG: COG2610"
/codon_start=1
/transl_table=11
/product="high-affinity gluconate transporter"
/protein_id="NP_709192.1"
/db_xref="GeneID:1026529"
/translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPQLMVIAVGSGSVIFSH
VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
misc_feature 3517854..3519167
/gene="gntT"
/locus_tag="SF3438"
/note="gluconate transporter; Region: PRK14984"
/db_xref="CDD:237880"
gene complement(3519215..3521299)
/gene="malQ"
/locus_tag="SF3439"
/db_xref="GeneID:1026873"
CDS complement(3519215..3521299)
/gene="malQ"
/locus_tag="SF3439"
/note="Code: G; COG: COG1640"
/codon_start=1
/transl_table=11
/product="4-alpha-glucanotransferase"
/protein_id="NP_709193.1"
/db_xref="GeneID:1026873"
/translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWQLTTEEGTQYKGHVTGGKAFNLPT
KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
QMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYKNVDSPEVRQFC
EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
MSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFADDGVNKLLKD
LDRRRRAAAKKK"
misc_feature complement(3519248..3521299)
/gene="malQ"
/locus_tag="SF3439"
/note="4-alpha-glucanotransferase; Provisional; Region:
malQ; PRK11052"
/db_xref="CDD:236831"
gene complement(3521309..3523702)
/gene="malP"
/locus_tag="SF3440"
/db_xref="GeneID:1026480"
CDS complement(3521309..3523702)
/gene="malP"
/locus_tag="SF3440"
/note="Code: G; COG: COG0058"
/codon_start=1
/transl_table=11
/product="maltodextrin phosphorylase"
/protein_id="NP_709194.1"
/db_xref="GeneID:1026480"
/translation="MSQPIFNDKQFQEVLSRQWQRYGLNSAAEMTPRQWWLAVSEALA
EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDL
LEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
DWHRSNYPWFRHNEALDVQVGIGGKVMKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLTDEHQMSWDDAW
AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
GITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
VCLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENLQADRVP
RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP
AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
misc_feature complement(3521312..3523699)
/gene="malP"
/locus_tag="SF3440"
/note="maltodextrin phosphorylase; Provisional; Region:
PRK14985"
/db_xref="CDD:237881"
gene 3524314..3526995
/gene="malT"
/locus_tag="SF3441"
/pseudo
/db_xref="GeneID:1026513"
misc_feature 3524314..3526995
/gene="malT"
/locus_tag="SF3441"
/note="Similar to Escherichia coli K12 positive regulator
of mal regulon gi: 2367223 (902 aa). BLAST with identity
of 99% in 894 aa. This CDS contains an in-frame stop
codon. The sequence has been checked and is believed to be
correct."
/pseudo
gene complement(3527051..3527872)
/gene="yhgJ"
/locus_tag="SF3442"
/db_xref="GeneID:1026446"
CDS complement(3527051..3527872)
/gene="yhgJ"
/locus_tag="SF3442"
/note="Code: K; COG: COG0430"
/codon_start=1
/transl_table=11
/product="RNA 3'-terminal-phosphate cyclase"
/protein_id="NP_709195.3"
/db_xref="GeneID:1026446"
/translation="MEGAELGSQRLVFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPAL
WFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVV
ATEVSPVASFSTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGIFSLHEQNIHN
LPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASPAAVGEY
LADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFGLIETDGVTRVSIE"
misc_feature complement(3527063..3527869)
/gene="yhgJ"
/locus_tag="SF3442"
/note="RNA 3'-terminal phosphate cyclase; Region:
PRK04204"
/db_xref="CDD:235255"
gene complement(3528071..3529297)
/gene="rtcB"
/locus_tag="SF3443"
/db_xref="GeneID:1026469"
CDS complement(3528071..3529297)
/gene="rtcB"
/locus_tag="SF3443"
/note="Code: S; COG: COG1690"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="NP_709196.1"
/db_xref="GeneID:1026469"
/translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
VMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAADLPENLAELRQA
IETAVPHGRTTGRCKRDKGAWENPPFNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
GTLGTGNHFIEICLDESEQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQDQLETLPSRD
LAYFMEGTEYFDDYLRAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEE
INCHHNYVQKEQLFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSD
LVEVIYTLRQVVCVKG"
misc_feature complement(3528074..3529276)
/gene="rtcB"
/locus_tag="SF3443"
/note="RNA-splicing ligase RtcB, repairs tRNA damage
[Translation, ribosomal structure and biogenesis]; Region:
RtcB; COG1690"
/db_xref="CDD:441296"
gene 3529478..3531076
/gene="rtcR"
/locus_tag="SF3444"
/db_xref="GeneID:1026468"
CDS 3529478..3531076
/gene="rtcR"
/locus_tag="SF3444"
/note="Code: O; COG: COG1221"
/codon_start=1
/transl_table=11
/product="2-component regulator"
/protein_id="NP_709197.1"
/db_xref="GeneID:1026468"
/translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWRPSLCIYQQESLVIDRL
ELLHDARSRSLFETLKRDIASVSPETEVVGVEIELHNPWDFEEVYACLHDFARGYEFQ
PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSTPRKKEQPRGPGEVTIIDLD
LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
AGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
LLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
RQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTE
ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDA
DRLRKYLARFGLTWEAVQDQHSSS"
misc_feature 3529478..3531064
/gene="rtcR"
/locus_tag="SF3444"
/note="Sigma54-dependent transcription regulator
containing an AAA-type ATPase domain and a DNA-binding
domain [Transcription, Signal transduction mechanisms];
Region: RtcR; COG4650"
/db_xref="CDD:443688"
gene complement(3531058..3531816)
/gene="glpR"
/locus_tag="SF3445"
/db_xref="GeneID:1026465"
CDS complement(3531058..3531816)
/gene="glpR"
/locus_tag="SF3445"
/note="Code: KG; COG: COG1349"
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor GlpR"
/protein_id="NP_709198.1"
/db_xref="GeneID:1026465"
/translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
misc_feature complement(3531061..3531816)
/gene="glpR"
/locus_tag="SF3445"
/note="DeoR/GlpR family transcriptional regulator; Region:
PRK10906"
/db_xref="CDD:182827"
gene complement(3531833..3532657)
/gene="glpG"
/locus_tag="SF3446"
/db_xref="GeneID:1026488"
CDS complement(3531833..3532657)
/gene="glpG"
/locus_tag="SF3446"
/note="Code: R; COG: COG0705"
/codon_start=1
/transl_table=11
/product="intramembrane serine protease GlpG"
/protein_id="NP_709199.2"
/db_xref="GeneID:1026488"
/translation="MITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQAE
RVRAELARFLENPADPRYLAASWLAGHTGSGLHYRRYPFFAALRERAGPVTWVMMIAC
VVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLG
GAVEKRLGSGKLIVITLISALLSGYMQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQ
SGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK"
misc_feature complement(3531836..3532657)
/gene="glpG"
/locus_tag="SF3446"
/note="intramembrane serine protease GlpG; Provisional;
Region: PRK10907"
/db_xref="CDD:182828"
gene complement(3532708..3533034)
/gene="glpE"
/locus_tag="SF3447"
/db_xref="GeneID:1026510"
CDS complement(3532708..3533034)
/gene="glpE"
/locus_tag="SF3447"
/note="Code: P; COG: COG0607"
/codon_start=1
/transl_table=11
/product="thiosulfate sulfurtransferase"
/protein_id="NP_709200.2"
/db_xref="GeneID:1026510"
/translation="MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
EVAYGA"
misc_feature complement(3532711..3533034)
/gene="glpE"
/locus_tag="SF3447"
/note="thiosulfate sulfurtransferase GlpE; Region: glpE;
PRK00162"
/db_xref="CDD:178908"
misc_feature complement(3532840..3532842)
/gene="glpE"
/locus_tag="SF3447"
/note="active site residue [active]"
/db_xref="CDD:238721"
gene 3533209..3534729
/gene="glpD"
/locus_tag="SF3448"
/db_xref="GeneID:1026759"
CDS 3533209..3534729
/gene="glpD"
/locus_tag="SF3448"
/note="Code: C; COG: COG0578"
/codon_start=1
/transl_table=11
/product="sn-glycerol-3-phosphate dehydrogenase"
/protein_id="NP_709201.3"
/db_xref="GeneID:1026759"
/translation="MNEGSMETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLAC
ATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRP
AWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLAN
AQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQF
FDEGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTT
DVEYKGDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLCDDESDSPQA
ITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLP
GGAIEGDRDDYAARLRRRYPFLTESLARHYTRTYGSNSELLLGNAGTVSDLGEDFGHE
FYEAELKYLVDHEWVRRTDDALWRRTKQGMWLNADQQSRVSQWLVEYTQQKLSLAS"
misc_feature 3533302..3534726
/gene="glpD"
/locus_tag="SF3448"
/note="glycerol-3-phosphate dehydrogenase; Reviewed;
Region: glpD; PRK12266"
/db_xref="CDD:237027"
mobile_element complement(3535323..3536748)
/mobile_element_type="insertion sequence:IS4"
gene complement(3535336..3536682)
/locus_tag="SF3450"
/db_xref="GeneID:1026484"
CDS complement(3535336..3536682)
/locus_tag="SF3450"
/note="Code: L; COG: COG3385"
/codon_start=1
/transl_table=11
/product="insertion sequence IS4 transposase InsG"
/protein_id="NP_709203.1"
/db_xref="GeneID:1026484"
/translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
YSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGN
EVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSR
LTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLM
TLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPRVVKERPWKYPTAPKKSQSVA"
misc_feature complement(3535594..3536592)
/locus_tag="SF3450"
/note="IS4 family transposase; Region: transpos_IS4_1;
NF033592"
/db_xref="CDD:468101"
gene complement(3536782..3539229)
/gene="glgP"
/locus_tag="SF3451"
/db_xref="GeneID:1026471"
CDS complement(3536782..3539229)
/gene="glgP"
/locus_tag="SF3451"
/note="Code: G; COG: COG0058"
/codon_start=1
/transl_table=11
/product="glycogen phosphorylase"
/protein_id="NP_709204.1"
/db_xref="GeneID:1026471"
/translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
TIKEYADHIWHIDPVRL"
misc_feature complement(3536785..3539229)
/gene="glgP"
/locus_tag="SF3451"
/note="glycogen phosphorylase; Provisional; Region:
PRK14986"
/db_xref="CDD:184948"
gene complement(3539248..3540681)
/gene="glgA"
/locus_tag="SF3452"
/db_xref="GeneID:1026461"
CDS complement(3539248..3540681)
/gene="glgA"
/locus_tag="SF3452"
/note="Code: G; COG: COG0297"
/codon_start=1
/transl_table=11
/product="glycogen synthase"
/protein_id="NP_709205.1"
/db_xref="GeneID:1026461"
/translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHVHDWHAGLAPAYLAARGRPAKSVFTV
HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
KSQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRF
VQRQAMAMDFSWQVAAKSYRELYYRLK"
misc_feature complement(3539254..3540681)
/gene="glgA"
/locus_tag="SF3452"
/note="glycogen synthase GlgA; Region: glgA; PRK00654"
/db_xref="CDD:234809"
gene complement(3540681..3541976)
/gene="glgC"
/locus_tag="SF3453"
/db_xref="GeneID:1026462"
CDS complement(3540681..3541976)
/gene="glgC"
/locus_tag="SF3453"
/note="Code: G; COG: COG0448"
/codon_start=1
/transl_table=11
/product="glucose-1-phosphate adenylyltransferase"
/protein_id="NP_709206.2"
/db_xref="GeneID:1026462"
/translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
VGTLEAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
misc_feature complement(3540690..3541964)
/gene="glgC"
/locus_tag="SF3453"
/note="glucose-1-phosphate adenylyltransferase;
Provisional; Region: glgC; PRK00725"
/db_xref="CDD:234824"
gene complement(3541994..3543967)
/gene="glgX"
/locus_tag="SF3454"
/db_xref="GeneID:1026472"
CDS complement(3541994..3543967)
/gene="glgX"
/locus_tag="SF3454"
/note="Code: G; COG: COG1523"
/codon_start=1
/transl_table=11
/product="glycogen debranching protein"
/protein_id="NP_709207.1"
/db_xref="GeneID:1026472"
/translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
HRYDLPGNSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKG
LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPSGYQVGNFPPLFAEW
NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGTLDLVERRRDSIHALLTTLLLSQG
TPMLLAGDEHGHSQHGNNNAYCQDNQLNWLDWSQASSGLTAFTAALIHLRKRIPALVE
NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
GEWHAIPPFAGEDNPVITVVWQGPAHGLCVFQR"
misc_feature complement(3541997..3543967)
/gene="glgX"
/locus_tag="SF3454"
/note="glycogen debranching protein GlgX; Region:
PRK03705"
/db_xref="CDD:235152"
gene complement(3543964..3546150)
/gene="glgB"
/locus_tag="SF3455"
/db_xref="GeneID:1026458"
CDS complement(3543964..3546150)
/gene="glgB"
/locus_tag="SF3455"
/note="Code: G; COG: COG0296"
/codon_start=1
/transl_table=11
/product="glycogen branching protein"
/protein_id="NP_709208.1"
/db_xref="GeneID:1026458"
/translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
LICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPIYRQYHHDKLT
FGMLYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
SIHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
misc_feature complement(3543967..3546138)
/gene="glgB"
/locus_tag="SF3455"
/note="1,4-alpha-glucan branching protein GlgB; Region:
PRK05402"
/db_xref="CDD:235445"
misc_feature complement(order(3544573..3544578,3544777..3544779,
3544933..3544938,3544942..3544944))
/gene="glgB"
/locus_tag="SF3455"
/note="active site"
/db_xref="CDD:200461"
misc_feature complement(order(3544573..3544575,3544777..3544779,
3544936..3544938))
/gene="glgB"
/locus_tag="SF3455"
/note="catalytic site [active]"
/db_xref="CDD:200461"
gene complement(3546423..3547526)
/gene="asd"
/locus_tag="SF3456"
/db_xref="GeneID:1026459"
CDS complement(3546423..3547526)
/gene="asd"
/locus_tag="SF3456"
/note="Code: E; COG: COG0136"
/codon_start=1
/transl_table=11
/product="aspartate-semialdehyde dehydrogenase"
/protein_id="NP_709209.2"
/db_xref="GeneID:1026459"
/translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
misc_feature complement(3546429..3547526)
/gene="asd"
/locus_tag="SF3456"
/note="aspartate-semialdehyde dehydrogenase; Reviewed;
Region: PRK06598"
/db_xref="CDD:235839"
gene 3547718..3548311
/gene="yhgN"
/locus_tag="SF3457"
/db_xref="GeneID:1026466"
CDS 3547718..3548311
/gene="yhgN"
/locus_tag="SF3457"
/note="Code: S; COG: COG2095"
/codon_start=1
/transl_table=11
/product="antibiotic transporter"
/protein_id="NP_709210.1"
/db_xref="GeneID:1026466"
/translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
misc_feature 3547718..3548308
/gene="yhgN"
/locus_tag="SF3457"
/note="YhgN family NAAT transporter; Region: PRK10739"
/db_xref="CDD:170674"
gene complement(3548368..3549645)
/gene="gntU"
/locus_tag="SF3458"
/db_xref="GeneID:1026470"
CDS complement(3548368..3549645)
/gene="gntU"
/locus_tag="SF3458"
/note="Code: GE; COG: COG2610"
/codon_start=1
/transl_table=11
/product="low affinity gluconate transporter"
/protein_id="NP_709211.2"
/db_xref="GeneID:1026470"
/translation="MKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFL
AVVVALGAMFGKILYETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIV
LLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILI
GLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVL
VGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICG
HALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQ
GAATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTG
ATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
misc_feature complement(3548374..3549645)
/gene="gntU"
/locus_tag="SF3458"
/note="low affinity gluconate transporter; Provisional;
Region: PRK10472"
/db_xref="CDD:182485"
gene complement(3549712..3550200)
/gene="gntK"
/locus_tag="SF3459"
/db_xref="GeneID:1026875"
CDS complement(3549712..3550200)
/gene="gntK"
/locus_tag="SF3459"
/note="Code: P; COG: COG3265"
/codon_start=1
/transl_table=11
/product="gluconokinase"
/protein_id="NP_709212.4"
/db_xref="GeneID:1026875"
/translation="MGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPL
NDDDRKPWLQALNDSAFAMQRTNKVSLIACSALKKHYRDLLREGNPNLSFIYLKGDFD
VIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVIKK
GK"
misc_feature complement(3549718..3550200)
/gene="gntK"
/locus_tag="SF3459"
/note="gluconokinase; Region: gntK; PRK11545"
/db_xref="CDD:236926"
misc_feature complement(order(3549868..3549870,3549880..3549882,
3550120..3550122,3550126..3550128,3550174..3550197))
/gene="gntK"
/locus_tag="SF3459"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:238979"
misc_feature complement(order(3549868..3549870,3550186..3550191))
/gene="gntK"
/locus_tag="SF3459"
/note="Gluconate-6-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:238979"
gene complement(3550378..3551316)
/gene="gntR"
/locus_tag="SF3460"
/db_xref="GeneID:1026464"
CDS complement(3550378..3551316)
/gene="gntR"
/locus_tag="SF3460"
/note 