LOCUS NC_004565 74082 bp DNA circular CON 28-MAR-2024
DEFINITION Clostridium tetani E88 plasmid pE88, complete sequence.
ACCESSION NC_004565
VERSION NC_004565.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02603289
Assembly: GCF_000007625.1
KEYWORDS RefSeq.
SOURCE Clostridium tetani E88
ORGANISM Clostridium tetani E88
Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
Clostridium.
REFERENCE 1 (bases 1 to 74082)
AUTHORS Bruggemann,H., Baumer,S., Fricke,W.F., Wiezer,A., Liesegang,H.,
Decker,I., Herzberg,C., Martinez-Arias,R., Merkl,R., Henne,A. and
Gottschalk,G.
TITLE The genome sequence of Clostridium tetani, the causative agent of
tetanus disease
JOURNAL Proc Natl Acad Sci U S A 100 (3), 1316-1321 (2003)
PUBMED 12552129
REFERENCE 2 (bases 1 to 74082)
AUTHORS Brueggemann,H. and Gottschalk,G.
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2002) Goettingen Genomics Laboratory, Institute
for Microbiology and Genetics, Grisebachstrasse 8, Goettingen
37077, Germany
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
AF528097.1.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Name :: GCF_000007625.1-RS_2024_03_28
Annotation Date :: 03/28/2024 00:54:07
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.7
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 2,864
CDSs (total) :: 2,788
Genes (coding) :: 2,750
CDSs (with protein) :: 2,750
Genes (RNA) :: 76
rRNAs :: 6, 6, 6 (5S, 16S, 23S)
complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)
tRNAs :: 54
ncRNAs :: 4
Pseudo Genes (total) :: 38
CDSs (without protein) :: 38
Pseudo Genes (ambiguous residues) :: 0 of 38
Pseudo Genes (frameshifted) :: 13 of 38
Pseudo Genes (incomplete) :: 25 of 38
Pseudo Genes (internal stop) :: 6 of 38
Pseudo Genes (multiple problems) :: 5 of 38
CRISPR Arrays :: 6
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..74082
/organism="Clostridium tetani E88"
/mol_type="genomic DNA"
/strain="Massachusetts"
/sub_strain="E88"
/db_xref="taxon:212717"
/plasmid="pE88"
/note="toxin plasmid"
gene join(73941..74082,1..140)
/locus_tag="CTC_RS14370"
/db_xref="GeneID:25393099"
CDS join(73941..74082,1..140)
/locus_tag="CTC_RS14370"
/EC_number="3.1.21.-"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0009036 - type II site-specific
deoxyribonuclease activity [Evidence IEA]"
/GO_process="GO:0009307 - DNA restriction-modification
system [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="TdeIII family type II restriction endonuclease"
/protein_id="WP_052042391.1"
/db_xref="GeneID:25393099"
/translation="MKAWKERSKTYFSLPFNPSGEGSDYRKAHSIPYRIFYIDNDESV
LIGAELWNKIGDNKNTYSDLLELFNKVGEKYSDTIKKTIWVYNREFFIY"
gene 441..1826
/locus_tag="CTC_RS13635"
/old_locus_tag="CTC_p1"
/old_locus_tag="pE88_01"
/db_xref="GeneID:24252511"
CDS 441..1826
/locus_tag="CTC_RS13635"
/old_locus_tag="CTC_p1"
/old_locus_tag="pE88_01"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003378571.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="response regulator transcription factor"
/protein_id="WP_011100780.1"
/db_xref="GeneID:24252511"
/translation="MLAKQLSLYDYIDNTLKNLVTCEVEIKAEEDNIQKATLHMDTLH
KGDDGYITIAIKHNNDWAQHHYKIEELKDNVGKVLSIDGVNIYLSPNSFYKPIRRIEN
VRKLNSLYIDLDYYTLDKFKDLTVDQILWNLEADYFKSKVPEANFIVITGRGLAIYWL
IEAVPYKALPLWNAVQKNFLNKLKDIGADEKSIDAARVMRLSGSVNQKNGHAVDLLFY
NDNKYNLRDIQENYLPDLTPYVKNPYHKAKGRRKRVVNLFNLYSLHYARLRDLVKLME
LREGMCRMEDGSLKATGLREFMCFLYRYWSSCYEGDIENALKSTLDFNKQFKEPLSIG
EVERATKSATKAYKQWLKDCPTGTYSRGGYNYKNKTLIKLLNITEDEMKVLETIIDNK
EVKRRDNEKNKARQKAKRRNELGLTKRQQEKEDKIREVKELYNKGLTQKEIANKLDIT
DRYVRKILNKK"
gene 1959..2228
/locus_tag="CTC_RS13640"
/db_xref="GeneID:24252510"
CDS 1959..2228
/locus_tag="CTC_RS13640"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_129052597.1"
/db_xref="GeneID:24252510"
/translation="MAVINAFQYMDTEKIVPIMDTLHLETALKNMKWEMKQENNIIII
KPRFLDSLFGEKIFIKTYNDDKVKIIGAKRLVNRLINYVNFNFAL"
gene complement(2876..3286)
/locus_tag="CTC_RS13650"
/old_locus_tag="CTC_p2"
/old_locus_tag="pE88_02"
/db_xref="GeneID:24252479"
CDS complement(2876..3286)
/locus_tag="CTC_RS13650"
/old_locus_tag="CTC_p2"
/old_locus_tag="pE88_02"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100781.1"
/db_xref="GeneID:24252479"
/translation="MKVSDIDRSLSEYKVVKGPRFSGQKFDNSDKKQCIKIALMAALG
HLNLAMSASLAAGEIANILWRQVNFDKIGGIYTLNYYVKIPYRKEHRGKNINVPVPHE
FFFVTFVLDDTPPKNANVVYTEWKSDGIRLANIN"
gene complement(3428..3646)
/locus_tag="CTC_RS13655"
/old_locus_tag="CTC_p3"
/old_locus_tag="pE88_03"
/db_xref="GeneID:24252478"
CDS complement(3428..3646)
/locus_tag="CTC_RS13655"
/old_locus_tag="CTC_p3"
/old_locus_tag="pE88_03"
/inference="COORDINATES: protein motif:HMM:NF013630.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LysM peptidoglycan-binding domain-containing
protein"
/protein_id="WP_011100782.1"
/db_xref="GeneID:24252478"
/translation="MQIIETNLQFKNINYGSLNPLNKTTPSNYIVKSYDALWSISKKF
NTSVELLKKINNLNSDTIYPNQILKIHL"
gene complement(3671..3886)
/locus_tag="CTC_RS13660"
/old_locus_tag="CTC_p4"
/old_locus_tag="pE88_04"
/db_xref="GeneID:24252477"
CDS complement(3671..3886)
/locus_tag="CTC_RS13660"
/old_locus_tag="CTC_p4"
/old_locus_tag="pE88_04"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012158037.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="BhlA/UviB family holin-like peptide"
/protein_id="WP_011100783.1"
/db_xref="GeneID:24252477"
/translation="MENEVLKLASSQGIWAALSVVLIFYILKAQEEREKNYQDIISKL
TDKFNIVEDVKKDVKEIKDYVYKKKTS"
gene complement(4065..4406)
/locus_tag="CTC_RS13665"
/old_locus_tag="CTC_p5"
/old_locus_tag="pE88_05"
/db_xref="GeneID:24252476"
CDS complement(4065..4406)
/locus_tag="CTC_RS13665"
/old_locus_tag="CTC_p5"
/old_locus_tag="pE88_05"
/inference="COORDINATES: protein motif:HMM:NF016432.4"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0016987 - sigma factor activity [Evidence
IEA]"
/GO_process="GO:0006352 - DNA-templated transcription
initiation [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sigma-70 family RNA polymerase sigma factor"
/protein_id="WP_052042392.1"
/db_xref="GeneID:24252476"
/translation="MTKEYILVSYIATSLVNKYIYLSKKHQSSTKLDVILNEEILYSE
PEGNLEDKILLNMSLDRLPKLQQKILKEYFYNDKSCLDLARELNVSRQSINQTKNRAL
NNLKKYLCDTY"
gene complement(4454..4582)
/locus_tag="CTC_RS15150"
/db_xref="GeneID:79382541"
CDS complement(4454..4582)
/locus_tag="CTC_RS15150"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_274542125.1"
/db_xref="GeneID:79382541"
/translation="MNNLYCLVKHSQSKDDKAILRILDKFSPLIKKYSRKLNYDGQ"
gene 4870..5223
/locus_tag="CTC_RS13670"
/old_locus_tag="CTC_p6"
/db_xref="GeneID:24252475"
CDS 4870..5223
/locus_tag="CTC_RS13670"
/old_locus_tag="CTC_p6"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100784.1"
/db_xref="GeneID:24252475"
/translation="MNRKQTDKFDLLNQECENTNVNIFNSIKADLLELVDIKPELIKL
LEDYKSSGNILDIEELNINNLPEEFKNKIEVRSIKIYNKVYNEFNKLCNQYKGIKKQD
LLSLALYEFCKKYRK"
gene 5316..5738
/locus_tag="CTC_RS13675"
/old_locus_tag="CTC_p7"
/db_xref="GeneID:24252474"
CDS 5316..5738
/locus_tag="CTC_RS13675"
/old_locus_tag="CTC_p7"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100785.1"
/db_xref="GeneID:24252474"
/translation="MRKFNFYIKYIFKILIYSFIVVIIPDIFIFKNFMESKKDLILLV
GGVIFISISILFSYRKKTRIITIDNKECFVKKLKGTLDKIKWELIREENNIIFINPEL
IAPRVFGREIIVKIYDNKVQFTGAKSLIDGLIWDLDNL"
gene 5780..5950
/locus_tag="CTC_RS14815"
/db_xref="GeneID:43882218"
CDS 5780..5950
/locus_tag="CTC_RS14815"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_155276563.1"
/db_xref="GeneID:43882218"
/translation="MGLIILSFVTGCLGLLLGSIIGNEIFMILLGVSGFFIPTLYILD
QMYIKFKNNNNE"
gene 6216..6398
/locus_tag="CTC_RS13685"
/db_xref="GeneID:24252472"
CDS 6216..6398
/locus_tag="CTC_RS13685"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_023439655.1"
/db_xref="GeneID:24252472"
/translation="MHKINSYFKLFFKFLLLYSIATILTLIIISIILTDNELNYNSLK
YFIVSFVIMAVINAFQ"
gene 6534..6860
/locus_tag="CTC_RS13690"
/old_locus_tag="CTC_p8"
/db_xref="GeneID:24252471"
CDS 6534..6860
/locus_tag="CTC_RS13690"
/old_locus_tag="CTC_p8"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100786.1"
/db_xref="GeneID:24252471"
/translation="MKLLSIEYIIVNIILFCSLCEKIYIFFSMGETIIRSKKRGILIM
DKYLYHYKWKEIKNYQLIDSNKLIFERFDSYNSSIDKIQIELYEKPIEELISFLEELI
PQNNFS"
gene complement(7121..7327)
/locus_tag="CTC_RS13700"
/db_xref="GeneID:24252469"
CDS complement(7121..7327)
/locus_tag="CTC_RS13700"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_023439657.1"
/db_xref="GeneID:24252469"
/translation="MSKVFIRKILYYLVISFIISKLIFGKIEIIKFNSHYSLVINQSM
YIIISFVNLYFILLAYNQEKNNKH"
gene 7792..8292
/locus_tag="CTC_RS13710"
/old_locus_tag="CTC_p9"
/old_locus_tag="pE88_09"
/db_xref="GeneID:24252467"
CDS 7792..8292
/locus_tag="CTC_RS13710"
/old_locus_tag="CTC_p9"
/old_locus_tag="pE88_09"
/inference="COORDINATES: protein motif:HMM:NF028534.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF5301 domain-containing protein"
/protein_id="WP_023439660.1"
/db_xref="GeneID:24252467"
/translation="MGADLIYRKTKKINVLFIFFIAVIFIFMVIRNNNHLEVPNPEDL
SSITFINVVNEKGIERVIVYEQSDIYKLLEVFKNSKKTNKESISDLPNKTKFNAIFFN
FTSGGNNLRSIYEENEVFYIHQPYNGVFKLGSNDLYVLDEIIEKGKKESISMQLEDIL
KDNFKR"
gene complement(8469..9008)
/locus_tag="CTC_RS13715"
/old_locus_tag="CTC_p10"
/old_locus_tag="pE88_10"
/db_xref="GeneID:24252466"
CDS complement(8469..9008)
/locus_tag="CTC_RS13715"
/old_locus_tag="CTC_p10"
/old_locus_tag="pE88_10"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012704800.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0016987 - sigma factor activity [Evidence
IEA]"
/GO_process="GO:0006352 - DNA-templated transcription
initiation [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sigma-70 family RNA polymerase sigma factor"
/protein_id="WP_011100788.1"
/db_xref="GeneID:24252466"
/translation="MYKLLCEYKRGNNKALEKIIENFIPLILKEASKYKIKCYDYEDL
VQHGYLSVIKACNKYKGNGDNFIPYCINAIKNNYTALLKGEIKHHREIPDEFILNKAK
DYMFTLEDEVIAYEKIEELYKALDKLSSSERYIIGSFYIGNKAMGEIACTTNKSYNEV
RYAKDKAIKNLQRILKKHI"
gene complement(9010..9564)
/locus_tag="CTC_RS13720"
/old_locus_tag="CTC_p11"
/old_locus_tag="pE88_11"
/db_xref="GeneID:24252465"
CDS complement(9010..9564)
/locus_tag="CTC_RS13720"
/old_locus_tag="CTC_p11"
/old_locus_tag="pE88_11"
/inference="COORDINATES: protein motif:HMM:TIGR02937.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0016987 - sigma factor activity [Evidence
IEA]"
/GO_process="GO:0006352 - DNA-templated transcription
initiation [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sigma-70 family RNA polymerase sigma factor"
/protein_id="WP_011100789.1"
/db_xref="GeneID:24252465"
/translation="MDIEHLVSKAKLGDKNSLEMILKEFTPTIIKLSSCVYLSSYNME
DLIQEGYLYLFNIIKKYNPKKSKFKTYANISLKNNYNYLIRQNVKYHGELSYNKEINL
DKDEMNYFLKDNFNIEDIFIKKALYKSLKSLDKKEFNILIHYYFKDGSLKDFSIKNNM
SYYNCIKLKNTALYNLKEKFERVV"
gene complement(9833..10255)
/locus_tag="CTC_RS13725"
/old_locus_tag="CTC_p12"
/old_locus_tag="pE88_12"
/db_xref="GeneID:24252464"
CDS complement(9833..10255)
/locus_tag="CTC_RS13725"
/old_locus_tag="CTC_p12"
/old_locus_tag="pE88_12"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100790.1"
/db_xref="GeneID:24252464"
/translation="MTKKKRILSIICICVLGVISIAASNYYKAPKNDTEKAQYMKLLK
DKNSKILVEVGNEAITENDLKVAKIFNDNNLSDDQLLDKLIRDKIFIIEGKKENNKYK
NENTTKNLIDNSKDESYKQTIDRVYDNLKQNYHIQLLK"
gene complement(10398..10553)
/locus_tag="CTC_RS14895"
/db_xref="GeneID:43965148"
CDS complement(10398..10553)
/locus_tag="CTC_RS14895"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019278365.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_023439663.1"
/db_xref="GeneID:43965148"
/translation="MSRGRKKEKGAKRELISIRITEEQKEVIKKNHWIKKEIDKSVRD
YLDAFIQ"
gene 10828..11817
/locus_tag="CTC_RS13730"
/old_locus_tag="CTC_p13"
/old_locus_tag="pE88_13"
/db_xref="GeneID:24252463"
CDS 10828..11817
/locus_tag="CTC_RS13730"
/old_locus_tag="CTC_p13"
/old_locus_tag="pE88_13"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019278366.1"
/GO_function="GO:0000166 - nucleotide binding [Evidence
IEA]"
/GO_process="GO:0030541 - plasmid partitioning [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParM/StbA family protein"
/protein_id="WP_011100791.1"
/db_xref="GeneID:24252463"
/translation="MENITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYN
LEDGYIDIEGNSHKIELDGKEYLIGEQGVEDSSETSKTNLIHKLAAYTAITQVLDSNK
NNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSG
VLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALT
DLNNGNLITNEQAESALNNGYMKKGGEIDTESSTVIKKVKEKFLKDAIKLIEKRGFKL
DQLDSLIFIGGTTQKLKEQISKTYPNNSIITNNSQWTTCEGLYKVAVAKYCIQ"
gene 11832..12173
/locus_tag="CTC_RS13735"
/old_locus_tag="CTC_p14"
/old_locus_tag="pE88_14"
/db_xref="GeneID:24252462"
CDS 11832..12173
/locus_tag="CTC_RS13735"
/old_locus_tag="CTC_p14"
/old_locus_tag="pE88_14"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100792.1"
/db_xref="GeneID:24252462"
/translation="MPGGRKQNAITVSFSKKNSDIYGLLVNKKENEKGFNQNEYICEC
IRFFEKYKDKLNNNLSEHDIMKLIDIKLEEFKNNLNLSEVQVKEVKNELNNEKLESDI
EFINSSWLEDD"
gene complement(12293..>12571)
/locus_tag="CTC_RS13740"
/pseudo
/db_xref="GeneID:24252461"
CDS complement(12293..>12571)
/locus_tag="CTC_RS13740"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003382546.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/db_xref="GeneID:24252461"
gene 12873..13541
/locus_tag="CTC_RS13745"
/old_locus_tag="CTC_p15"
/old_locus_tag="pE88_15"
/db_xref="GeneID:24252460"
CDS 12873..13541
/locus_tag="CTC_RS13745"
/old_locus_tag="CTC_p15"
/old_locus_tag="pE88_15"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017753349.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/GO_function="GO:0042626 - ATPase-coupled transmembrane
transporter activity [Evidence IEA]"
/GO_function="GO:0140359 - ABC-type transporter activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_035125440.1"
/db_xref="GeneID:24252460"
/translation="MHMLTIKNIYKTYGSGTGKVQVLNGINLTVNKGEFLSIMGPSGS
GKSTLVHIMAGLDKPTKGEIIFKGKNIYDLNENILSDLRRKEFGFIFQSFNLIPVLTA
EENIKLPLMVDKGKFDIEYFNYLVEYLNIKDRLQHYPSELSGGQQQRVAIARALVTKP
NIVFADEPTGNLDSDSTNEVLDILCNSIKKFNQTLIMITHDLNVASYGDRVLKLKDGS
IIKN"
gene 13558..16011
/locus_tag="CTC_RS13750"
/old_locus_tag="CTC_p16"
/old_locus_tag="pE88_16"
/db_xref="GeneID:24252459"
CDS 13558..16011
/locus_tag="CTC_RS13750"
/old_locus_tag="CTC_p16"
/old_locus_tag="pE88_16"
/inference="COORDINATES: protein motif:HMM:NF014717.4"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="WP_011100794.1"
/db_xref="GeneID:24252459"
/translation="MSNLKLIIKYMKNKPKRTLSIIFSIIITSILLTIVGLVNYNIQI
NTIDNGKKLYGDYYADLNTKNKQKTETLKGYKYLKDKTVHIPYGMFTSKDMKTSLNIE
ISDETFLKSTGLEMLKGRFPKNKDEICVDESFLENMNITKKLDQYITLDLINSPKNLK
SDGYKEYKFTKKFKLVGILKTNPGIKFKGVSCGILSIKNIDDIPKDFIDYHILIKTFP
YKSVEEITKSIEHIQNRFNINEDDIFINRGLMQVIKHSNDSKILSIAFEMVVIIASIL
TIYNIFNMSILDRTKDYGILRCLGFRKKKIMSIVLKEGLILSIISIPIGILIGCFLSK
SIYFSIGKILNNTVKSLTLSIYVILLVFIITLLSVSISAFMPAIYAYNVSPIGAIKNL
NVYSKIHKIKHRKGHFIIKKLFKNEGMLAYKNIWRMKKRTYLIVFSLGISITIFTAFM
YYFNHIAIEDPSENFKNGQFKLTFDNRLDNTYCYDNNFISKINNMHGIKHITKIQSAT
ETAVLNESFIKSNLKDNPSENNLTIDNGEYRVPCNVIGYNEEIVKDLKTKIGKDEVIL
INDKYAKNNTNLKAGDIITLRRFYKDNIEQRVKYEDKEFKIKDILNKAPYQSSMIGIS
ALIRHDDFKNFTKINGYRTLDISVYENFNMDFINNELENLTKEVKYSKLLSYYKEIKY
IKDSIKFIKILTYSFIACIVLIGLLNIINTINTNIVLRMSEFATLKAIGFNKNHIRKV
IMFEGLFYGILSSIFGMFTSGVVCILLYNLIPNMKPGFSIIIFCIPELFIIIISLLSS
IVPLRKVNKINVINTLNEL"
gene complement(16369..17391)
/locus_tag="CTC_RS13760"
/old_locus_tag="CTC_p17"
/old_locus_tag="pE88_18"
/db_xref="GeneID:24252457"
CDS complement(16369..17391)
/locus_tag="CTC_RS13760"
/old_locus_tag="CTC_p17"
/old_locus_tag="pE88_18"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003292404.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="RNA-guided endonuclease TnpB family protein"
/protein_id="WP_052281516.1"
/db_xref="GeneID:24252457"
/translation="MKEQKLHIQDTCLEYIKTVNDIVSLMVAENKSLKLTSKDIIANL
PSAVKNQAIRDSKSVYSKYKKTKIQNFLKKPMCIWNNQNYSIGENYIAFPVMINGKSK
KIKVKAIIEQYQKDLLTNKLGTLRITKKANKLMAQISIDVVEKENVNNKAMGIDLGLK
IPAVAVTEDKKVKFFGNGRQNKYIKRKYRSLRKKLGKAKKINKIKSINDKEQRYMKDQ
DHKISRGIVNFAIQNNISVIRLEKLTNIRNTAKTNRKNEKNLHTWSFYRLAQYIEYKA
LLEGIKIEYVNPCNTSKQCPICGKLNTAKDRKYQCSCGYKAHRDLNACINIINATVVD
GNSLQA"
gene complement(17429..17836)
/gene="tnpA"
/locus_tag="CTC_RS13765"
/old_locus_tag="CTC_p18"
/old_locus_tag="pE88_19"
/db_xref="GeneID:24252456"
CDS complement(17429..17836)
/gene="tnpA"
/locus_tag="CTC_RS13765"
/old_locus_tag="CTC_p18"
/old_locus_tag="pE88_19"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011100796.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS200/IS605-like element ISClte2 family
transposase"
/protein_id="WP_011100796.1"
/db_xref="GeneID:24252456"
/translation="MEQKYKSNNNIVYSCKYHIVWCPKYRRKVLIGNVETRLKELLIE
TCADIEVDIIKMELMPDHVHMLIEVDPQFGVHKAIKRMKGRTSKMLRQEFPHLKTKLP
TLWTNSYFVSTVGGAPLSAIKQYIENQKTSQRK"
gene 18195..18539
/locus_tag="CTC_RS13770"
/db_xref="GeneID:24252455"
CDS 18195..18539
/locus_tag="CTC_RS13770"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035125509.1"
/db_xref="GeneID:24252455"
/translation="MIKNIFKSNCFSFLIILIFNILLITGKIEFGSESGLVIVIAFMF
CFTSGLIIEIKRGNKSTIKLRILTTIIFSIILLSPINIIPNKYSYSSLFIIATELLML
EIIIYYFISDKI"
gene 18829..19047
/locus_tag="CTC_RS13775"
/db_xref="GeneID:24252454"
CDS 18829..19047
/locus_tag="CTC_RS13775"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035125507.1"
/db_xref="GeneID:24252454"
/translation="MAAELHMKNQVIPKKISEFLSNAKLSEEEIWERLRENWIRDGCN
FKWYHKNKKIVNWNIKRAQKQLVLIKII"
gene complement(19636..19851)
/locus_tag="CTC_RS13780"
/db_xref="GeneID:24252453"
CDS complement(19636..19851)
/locus_tag="CTC_RS13780"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035125505.1"
/db_xref="GeneID:24252453"
/translation="MFDNRNLLILIILASILCRIDMWRINKNYNKLLDAKEEDIYEYL
YNLSKIQVESNCTYFFLMLIALLLLFK"
gene 20256..21941
/locus_tag="CTC_RS13785"
/old_locus_tag="CTC_p19"
/old_locus_tag="pE88_20"
/db_xref="GeneID:24252452"
CDS 20256..21941
/locus_tag="CTC_RS13785"
/old_locus_tag="CTC_p19"
/old_locus_tag="pE88_20"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013726799.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication initiator protein A"
/protein_id="WP_011100797.1"
/db_xref="GeneID:24252452"
/translation="MDKKNKVIKCNTSIVDNNIIESPLFISSIKEIITIGQLEKMDIS
SSVKRVLKVLKEDFKKSPLPMDYENFPVVYKRWNDSKGMIRELLITSSIPDMTTMDVW
NGLIGLYIQKLTPIYFNNENSSYDINEDEMEYTLYELAKFMNKSTGGKSLDKLMSEII
RLNNANYYSFANGVIFDKKNDKYLKSKTKGLSLIVDCEFNSEKRVKDQKVNTKCKVQF
NRLIVDNIRYEYIKYINPKEYFALPSRGFTRRLYIYIKGNSYLSNGHRSTYIKRSFQV
LRNKLPIHEHQPSKIKERLKKPLENLKKFNIISDYFFGDEVFINGITEKCVYFILEGS
REDLIKKLEKSSLLIKSDNEDLEFKMEIPKDLNSFLVEKGFSEVMAKEILYKYDKWTI
IKYILWLKEKEFENNQSVKNFPGMLRFALQGDTVNLENTHKHIVAFVDEKRISEKNIK
LNKEEFLKKSYEDYIQKETEKFKKEDEIAYKVLQDTILENLNVSYENKLREFALFEKN
ITKLEKENWEEQKKKWHEFNELREKSRLFKEQFEKSLIIIRNLKFYEDFKRDI"
gene complement(21961..23022)
/locus_tag="CTC_RS13790"
/old_locus_tag="CTC_p20"
/old_locus_tag="pE88_21"
/db_xref="GeneID:24252451"
CDS complement(21961..23022)
/locus_tag="CTC_RS13790"
/old_locus_tag="CTC_p20"
/old_locus_tag="pE88_21"
/inference="COORDINATES: protein motif:HMM:NF016289.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="M28 family peptidase"
/protein_id="WP_052042394.1"
/db_xref="GeneID:24252451"
/translation="MDVRYNRLSYLMNFKFIRNITIIVIVLVLGFYGFINGNNTKTSK
ITNMNNFKMPTTEEIITKLCSNEFSGRVINSKGNELTVEYMENLFNKLKLEPVFKDSY
LHEFESAILGNSDENGVPEKQTILKLNNVVGKISGKNNKNAIILGAHFDGYGKVTNPN
TKKVEIFRGALDNASGVATILNIAHNLKTRKDTLDYDVIICGFNGELTGYKMGSEQFV
KDIKHLYDKIFYINIDCVGAKKAGPIALKNISRVKDSSQLYDSIKDIFKKHNIHYEDI
YSSKKVEDCFEKNFFGVSDYKYFEKNNIPNIHIAQSKISDLILKVEDTPEILDYNLIY
ALALSLSDFTKNNELKFTN"
gene 23261..23458
/locus_tag="CTC_RS13795"
/db_xref="GeneID:24255263"
CDS 23261..23458
/locus_tag="CTC_RS13795"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_128993826.1"
/db_xref="GeneID:24255263"
/translation="MLELLYLIEDEDNRFILNLRPQGYIDPAIPARMLRYRVNIYESM
LSTNEDLLPMKQVVIYFSKEQ"
gene complement(23519..23737)
/locus_tag="CTC_RS13800"
/db_xref="GeneID:24255262"
CDS complement(23519..23737)
/locus_tag="CTC_RS13800"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_181894055.1"
/db_xref="GeneID:24255262"
/translation="MMYIIGLIINRLEGLTTNNSKIHIDRLEKDTPSEAIQLSQKLYK
MMPRIKLSDLLLQVSKWIGFYRNFIHVF"
gene 23809..24495
/locus_tag="CTC_RS13805"
/old_locus_tag="CTC_p21"
/db_xref="GeneID:24255261"
CDS 23809..24495
/locus_tag="CTC_RS13805"
/old_locus_tag="CTC_p21"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012064643.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0000160 - phosphorelay signal transduction
system [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="response regulator transcription factor"
/protein_id="WP_011100799.1"
/db_xref="GeneID:24255261"
/translation="MYKILIVEDDSSIAELLASHIYKYGIECLICNDFDNILDEFIKL
DPNLVLMDVNLPKYDGFYWCRKLRQISKCPIIFISARAGDMDQILAMENGADDYVTKP
FSFEVVVAKINANLRRVYGDYAKNENDRILKKENIIFYFDSLILQNGDKKVMLTKKEA
ALATTLLENSPKVLSRESLLSKLWDDESFVEENTLNVNVTRLRKKFAEIDAKVEIEAI
RGMGYRLFQV"
gene 24499..25473
/locus_tag="CTC_RS13810"
/old_locus_tag="CTC_p22"
/db_xref="GeneID:24255260"
CDS 24499..25473
/locus_tag="CTC_RS13810"
/old_locus_tag="CTC_p22"
/EC_number="2.7.13.3"
/inference="COORDINATES: protein motif:HMM:NF014567.4"
/GO_function="GO:0000155 - phosphorelay sensor kinase
activity [Evidence IEA]"
/GO_function="GO:0004673 - protein histidine kinase
activity [Evidence IEA]"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_process="GO:0007165 - signal transduction [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sensor histidine kinase"
/protein_id="WP_128993827.1"
/db_xref="GeneID:24255260"
/translation="MKLFLKDNLGMIILYIINFIVLAFFYNKLGGFKENMSYFIFLSL
FFLMCFLVYKYILNKQIYKKLSEKPKSMDDMLTIDPHSPLEEAFFKTIQEYMKLYNKD
INFMKNSQKEYKIMLNNWVHQMKTPVSVINLLAQNNYDNEDFQKVALENRRIDYNLSQ
ILTFLRIDDFANDMKIEKVNLKIVALEVVNELKEFFITQSVFPKLSISQNLSINTDKK
WIKYAIYQIVNNAIKYSKKNGTVYINGFVEEDMVVLEIINRGIGIKKSDINRIFDVFF
TGDNGRTFGESTGVGLYIVKKVLDILDHKISVKSKPGEETIFYIYFKP"
gene 25671..26078
/locus_tag="CTC_RS13815"
/old_locus_tag="CTC_p23"
/db_xref="GeneID:24255259"
CDS 25671..26078
/locus_tag="CTC_RS13815"
/old_locus_tag="CTC_p23"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100801.1"
/db_xref="GeneID:24255259"
/translation="MKKINKVLINLIICCTIITIITGCNKVNSKNTEIQKLQSDLIIL
SEKNSQRYFNKKLNTKDFDISLAKQVKENEYEDIKTLDGVKNIYMIGHFNGKPSDIVE
FVLVYNLQSKKVIEFGIKNLKNDNMVYANLKEE"
gene 26108..26866
/locus_tag="CTC_RS13820"
/old_locus_tag="CTC_p24"
/db_xref="GeneID:24255258"
CDS 26108..26866
/locus_tag="CTC_RS13820"
/old_locus_tag="CTC_p24"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010296604.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/GO_function="GO:0042626 - ATPase-coupled transmembrane
transporter activity [Evidence IEA]"
/GO_function="GO:0140359 - ABC-type transporter activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_011100802.1"
/db_xref="GeneID:24255258"
/translation="MSILEVKDIEKIYSGKVNYTALNGVNFELEKGEFVAIMGPSGSG
KTTLLNCVSTIDSPTRGEIIINNKRPHELDDDNLAKFRRQELGFVFQDFNLVNTLTVE
ENIILPLTLDSVSRRVMKDRLKISSNLLGIEKLLKKRTFEISGGQAQRVAIARSIIHE
PSLLLADEPTGNLDSKAVKDVMELFVSINKKLNTTILMVTHDAYVASFCNRVIFIKDG
KLYNEIHSGDSQSEFYEKIIDMLSFLGGGRSDIK"
gene 26853..28781
/locus_tag="CTC_RS13825"
/old_locus_tag="CTC_p25"
/old_locus_tag="pE88_26"
/db_xref="GeneID:24255257"
CDS 26853..28781
/locus_tag="CTC_RS13825"
/old_locus_tag="CTC_p25"
/old_locus_tag="pE88_26"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010296605.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FtsX-like permease family protein"
/protein_id="WP_011100803.1"
/db_xref="GeneID:24255257"
/translation="MTLNRLALNNVLRDKWTYFAYFLSSVFSIFIFFCFSVSMFHPDL
TIIQNGSALSMAMMVGSIMVYIFSFMFISYSIRAFMKSREKTLGLFIIMGTSKKQLNS
MIFKENMLIGIAAIITAIIFGMVFSPLFLMIGKKIMMLEGFRMYVPIKSILLTFAMFF
ILFFIVSFASPLFISKNKIINMLKSDKTDEKKLVFSPLLIIIGLLMIISLVFIFNLYN
NIALVTNFVDSTIGSISIFAGILVVLYILYTQLPILIIGIIKKKRLYLRKTNMIIISD
IKAKLRSNVKIMYLITILFTVAFYAIVILYSANTDVEKVTKASYPYSYTYVSLSNNDY
EKQHVNLIRNSIKDKDGYKEYIFTIRCKGKTYENAVVMSQSEYNNVLKATNSNPISLK
NNEIYIVSGSPKTMPSRNINEDVKNILEKQGITPKVVGVNAKNITTEGYFGEINVLND
EMMNAFNKKEGFENIKVYGFNIGNWKEEGRITENLRSKIKITDEYKFGFFSAQELFVT
EKNSKNLMFYIGFFISIIFVIAASSMIYFKLFTEIEKECIKFKGIVKIGLSKKELSKI
ISIEIFILMFTPFLLAIAFLFAGSGSLGNKISSYFTVSVVCSLVFLIIQTLGYIIVNL
KYKKVIFKKVTDKVWTAF"
gene complement(29178..29375)
/locus_tag="CTC_RS13830"
/db_xref="GeneID:24255256"
CDS complement(29178..29375)
/locus_tag="CTC_RS13830"
/inference="COORDINATES: protein motif:HMM:NF024059.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="WP_035111379.1"
/db_xref="GeneID:24255256"
/translation="MNIEHLVSKAKLGDKTSLEMILKEFTPTIIKYSSCVYLSSYNME
DLIQKGYLYLFNIIKNIILKK"
gene 29542..30111
/locus_tag="CTC_RS13835"
/old_locus_tag="CTC_p26"
/old_locus_tag="pE88_27"
/db_xref="GeneID:24255255"
CDS 29542..30111
/locus_tag="CTC_RS13835"
/old_locus_tag="CTC_p26"
/old_locus_tag="pE88_27"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013913697.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100804.1"
/db_xref="GeneID:24255255"
/translation="MNKQKFNNLDLMDQLEYVNKKLSDGESLREISKCLNMSKTTIRN
RFKKIDYVFNKDKKQYIKDSDEYKKNINMLQVKPIENKEIKEDEYIYNTNVLTNVEAK
EKLINIIDNYDNIEKMLKWFENQKNIIEVEEINIDTDKLVGNAKTTTVRLYDKVWEDF
RKFMKGYPEYKSMDLVSMALVEYMSKYKK"
gene 30338..31174
/locus_tag="CTC_RS13840"
/old_locus_tag="CTC_p27"
/old_locus_tag="pE88_28"
/db_xref="GeneID:24255254"
CDS 30338..31174
/locus_tag="CTC_RS13840"
/old_locus_tag="CTC_p27"
/old_locus_tag="pE88_28"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002592690.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="methyltransferase domain-containing protein"
/protein_id="WP_011100805.1"
/db_xref="GeneID:24255254"
/translation="MKKQKIIRFEDSERIFKCPVCMEALYLKDKSLLCKNKHCFDISK
HGYINFILNAKSQKDYNKNSFENRRIILERGIYNHILKEIIDFLNDTSSISRVLDVGC
GEGFYANQIYQSTNKEVCAFDISKESIQLAAKRDTSNSVKWFVADLAHLPMKNQSVDC
ILDIFSPANYCEFHRILTPDGYLVKIIPGDGHLKELREKAREYLKNKDYSNQQIVNYF
ENHFSTICRKKITAQYEISANEREALINMTPLLFNVNKENIDWTEINHITIEAEILIG
RP"
gene 31193..31504
/locus_tag="CTC_RS15035"
/old_locus_tag="CTC_p28"
/db_xref="GeneID:72390776"
CDS 31193..31504
/locus_tag="CTC_RS15035"
/old_locus_tag="CTC_p28"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_242651348.1"
/db_xref="GeneID:72390776"
/translation="MNNSRSTTIKLNITKRLVVLVYYKRSFFIHLYNLHYARLRDLVK
LMELRCGMCRMEDGSLKPTGSREFMCFLYRYWSSCYEGDTENALNSTLDFNKQFKEPE
K"
gene 31639..31890
/locus_tag="CTC_RS15040"
/db_xref="GeneID:72390777"
CDS 31639..31890
/locus_tag="CTC_RS15040"
/inference="COORDINATES: protein motif:HMM:NF013540.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="WP_052040444.1"
/db_xref="GeneID:72390777"
/translation="MKNLETIIDNKEVKRRDNEKNKARQKAKRRNAKGLTKRQQEKLE
KIKKREELRKLGLKQKEIADKLGVTKSLVSMYMKELKGR"
gene 32121..32252
/locus_tag="CTC_RS15155"
/db_xref="GeneID:79382542"
CDS 32121..32252
/locus_tag="CTC_RS15155"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_274542123.1"
/db_xref="GeneID:79382542"
/translation="MNKKQIVSLGTCMCIFFNTSVFAKGIQEKEGKNNKISYSTKYH"
gene 32303..32668
/locus_tag="CTC_RS13850"
/old_locus_tag="CTC_p29"
/old_locus_tag="pE88_30"
/db_xref="GeneID:24255252"
CDS 32303..32668
/locus_tag="CTC_RS13850"
/old_locus_tag="CTC_p29"
/old_locus_tag="pE88_30"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100806.1"
/db_xref="GeneID:24255252"
/translation="MTSGHTYLGCVLGNVEVQKKSNDQILLLGTATTGVAGLLYKIAP
IVGAVVGGITAVIAGHQYYLKTLPDNIITYSNQYFRWTNTRNYEYEYKYYSGFKDRAG
NVLSSNIYYSYGDFSYLAD"
gene 32685..32948
/locus_tag="CTC_RS13855"
/db_xref="GeneID:24255251"
CDS 32685..32948
/locus_tag="CTC_RS13855"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035125499.1"
/db_xref="GeneID:24255251"
/translation="MIKKLEMIFNIILICISLTLYNYKSIRILNYNYVSLVKICYLLF
VFTNLISIFREIRYAYPKVNKINIVNIALKSLVIVLFTLLIVK"
gene complement(33162..34718)
/locus_tag="CTC_RS13860"
/old_locus_tag="CTC_p30"
/old_locus_tag="pE88_31"
/db_xref="GeneID:24255250"
CDS complement(33162..34718)
/locus_tag="CTC_RS13860"
/old_locus_tag="CTC_p30"
/old_locus_tag="pE88_31"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_162485002.1"
/db_xref="GeneID:24255250"
/translation="MAWLKDIEPNILEKYSIVLLYSLFLSLLGLLISNITKNTVIGYI
VPSIYCLSQIIIGISYLEKYVPLIATGINLQLTEHILMGNIYFTIFSVIILLIINFFY
LSKGERIRRNLIFSTIILIICCCTTLGIYSFIKYNNESAFGKFIYNKPVYIIGTKDKE
IAKYLDSKNIDFLSKDTITMDDIKQNNTIIISSKNSSFVNSTKKLLDLNLLLKNNGIV
SNKSGVYNISSYGILLKNPFNKDVLLSLIECTNTYDLDYIINNPKSNFLGVKNGKPMI
KSNCSLNKFNISNVIKNSTILNNDCLLMNENNTTTLLYRNINAKDATNISNLWEMINT
SLETLNTNNKTNNILKVYFKEKQNNNDKVLSICINDTKSLESDSLYNTYNNICYEILS
NQILKNIKDPDLKKGWIEYMINVYIPTNILKKYNSKPLCLDSITLEGIKSSYLEEMQL
SSNNKENNIHKVILASKMLNFINTKGKIEDFIKDISTKDKTLTNSELKTIYSNYVDPK
TSKNDFNNFK"
gene complement(35102..35482)
/locus_tag="CTC_RS13865"
/db_xref="GeneID:24255249"
CDS complement(35102..35482)
/locus_tag="CTC_RS13865"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035125495.1"
/db_xref="GeneID:24255249"
/translation="MRSLIVSKLELRNLFKSYMLPLEIIILIISPFFIEKSNLINHID
NARFVAYTLMHALCMLGGFIIPFQIFQIFYQDQTTDISQIIYSNPILAKQYIIGKYLA
SVFNFLQFALISTLISIIYPIFLI"
gene complement(35521..36234)
/locus_tag="CTC_RS13870"
/old_locus_tag="CTC_p31"
/db_xref="GeneID:24255248"
CDS complement(35521..36234)
/locus_tag="CTC_RS13870"
/old_locus_tag="CTC_p31"
/inference="COORDINATES: protein motif:HMM:NF012235.4"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ATP-binding cassette domain-containing protein"
/protein_id="WP_115638828.1"
/db_xref="GeneID:24255248"
/translation="MNICGYDIYKDKLNVRKIVGFLPQEFNIYPQLSPREFLDYIAQL
NYIKNPLERKKVINTVMEKVNLVDCMDKKIGSFSGGMKRRLGIAQALIKNPEVLIVDE
PTAGLDPEERIRFRTMLVELSQNKIVILSTHIVEDVSASCEKIALLASGEIKYVGSPS
SFIKNVDNMVWEKTIYNTRELIKIKNLYNIVSIRQSSNGIIIRFIANVNNISEKQNLI
SVNPSLEDAYLHYMENIRK"
gene 36699..37001
/locus_tag="CTC_RS13875"
/db_xref="GeneID:24255247"
CDS 36699..37001
/locus_tag="CTC_RS13875"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013290239.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2442 domain-containing protein"
/protein_id="WP_023439689.1"
/db_xref="GeneID:24255247"
/translation="MEYMPEVIQVVPTEEFKVYVYFDDGSIHLYDASELVTKGIFKPL
SDIKIFKDTCTVLNGTLAWSLDGTYDESTCLDVDPFVIYEEYPEVEEPTFLFKNYT"
gene complement(37332..37562)
/locus_tag="CTC_RS13880"
/db_xref="GeneID:24255246"
CDS complement(37332..37562)
/locus_tag="CTC_RS13880"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011988294.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035125494.1"
/db_xref="GeneID:24255246"
/translation="MSLPKITQENVHIFIPLKASKVSQRLAKNYNLSLKDALLEFYNS
KTYEDLEQEDTKLWHEGINYLYKELEKEKSLQ"
gene complement(37559..37690)
/locus_tag="CTC_RS15045"
/db_xref="GeneID:72390778"
CDS complement(37559..37690)
/locus_tag="CTC_RS15045"
/inference="COORDINATES: protein motif:HMM:NF024080.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF3791 domain-containing protein"
/protein_id="WP_242651344.1"
/db_xref="GeneID:72390778"
/translation="MANLFYENGITDFLIDNYDILHTQGKGYILSEIELFLQNRGII"
gene complement(37990..38466)
/locus_tag="CTC_RS13890"
/old_locus_tag="CTC_p32"
/old_locus_tag="pE88_33"
/db_xref="GeneID:24255244"
CDS complement(37990..38466)
/locus_tag="CTC_RS13890"
/old_locus_tag="CTC_p32"
/old_locus_tag="pE88_33"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100809.1"
/db_xref="GeneID:24255244"
/translation="MKYKNKYYLFIIFGVLIILFIDYKFTFNDIPSSMPSLKVRFDNG
TFYATPNGYNWSSSKNSSSNLGYYSIEVAKEIKAIKVPKNSNLKLILSSDKGLKIFNV
KQIIGTTIDNHTLKDINLNDNIIITPENNGEYIYYVYADWGDNHFVEYIIKIVVED"
gene complement(38488..38646)
/locus_tag="CTC_RS14820"
/db_xref="GeneID:43882219"
CDS complement(38488..38646)
/locus_tag="CTC_RS14820"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_023439692.1"
/db_xref="GeneID:43882219"
/translation="MKKTFLLGLAVLITCSLSTVVVIKQVYFIKDRLIFYRELVDGEN
YHKLIIIN"
gene complement(38709..38882)
/locus_tag="CTC_RS14825"
/db_xref="GeneID:43882220"
CDS complement(38709..38882)
/locus_tag="CTC_RS14825"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_155392370.1"
/db_xref="GeneID:43882220"
/translation="MKELFPDTLKQILEYDYKNNFTSIQFHLLCAKLLLSILINLLNS
DKINKICSKNMQY"
gene complement(38919..39206)
/locus_tag="CTC_RS13895"
/db_xref="GeneID:24255243"
CDS complement(38919..39206)
/locus_tag="CTC_RS13895"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_023439693.1"
/db_xref="GeneID:24255243"
/translation="MKTNLDNFIYIILFLLIIINIFIIIRRNSMYKKQHFKNIKNYKN
KLCIELAILILYIINVYVSLKICKYNVQVWCILILAATITVKFILINLSKY"
gene complement(39438..42413)
/gene="colT"
/locus_tag="CTC_RS13900"
/old_locus_tag="CTC_p33"
/old_locus_tag="pE88_34"
/db_xref="GeneID:24255242"
CDS complement(39438..42413)
/gene="colT"
/locus_tag="CTC_RS13900"
/old_locus_tag="CTC_p33"
/old_locus_tag="pE88_34"
/EC_number="3.4.24.3"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011100838.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="collagenase ColT"
/protein_id="WP_011100838.1"
/db_xref="GeneID:24255242"
/translation="MKKKFIKMLCSIAIGCMISTSYSIKVSAFSNGNTKTNPNGEFKS
LSLNSTNPYKTKYSFNDLNKLSNKEILDLTSKIKWSDISDLFQYNKDSYTFYSNKERV
QALIDGLYEKGCNYTSTDDKGIDTLVEILRSGFYLGYYNDSLKYLNDKSFKDKCIPAM
IAIENNKNFKLGENGQDTVVHALGKLIGNTSCNDEVVNKTIPILEQYYNEIDKYSKDR
LKSNAVYNFMKEINYDISQYEYAHNIRDYKNTPWSGKIDSFIDTISKFASISNVTKDN
GWIINNSIYYTAKLSKYHSNPSIPHSVIDNCIEIFPDYSEQYFTAIEAIKEDFNSRDS
KGNVIDINKLIEEGKKHYLPKTYTFDNGKIIIKAGDKVEESKIQKLYWASKEVKSQFH
RIIGNDKPLEVGNADDILTIVIYNNPEEYKLNKTLYGYSVDNGGIYIEGIGTFFTYER
TPQESIYSLEELFRHEFTHYLQGRYLIPGLFNKGDFYKGNNGRITWFEEGSAEFFAGS
TRTSVLPRKSMVGGLSKNPKERFNADKLLHSKYSDGWDFYKYGYAFSDYMYNNNKKLF
SDLVSTMKNNDVKGYEALIEESSKDSKINKDYEYHMENLVNNYDNYTIPLVSDDYMKQ
YDNKSLHEIKSDIEKAMDVKNSQITKESSQYFDTYNLKATYTLSSNKGEISNWNYMNN
KINEALNKLDNLSWGGYKTVTAYFSNPRLNSNNEVVYDIVFHGLLSHNKNSNEKVEVK
EEPEIKDKDSFENVIYEKENNDSFDKANKIHKNQIVMATLDTEDYRDTFYFDALTSGS
IDITIENIHGNSDAFNWLVYNDEDLNNYIAYPTKKEDNKLMGSFKVHKPGRYYILVYK
TSLNKVNYKLNISDATNMAPVIKKIHEKENNDSFETANKITLDTLVLGNLDYKDVSDI
YSFDIENTKDLNIKLTNLNNLGIAWNLYKESDLNNYIAYGAKSDNAIVGKCNLSPGKY
YLYVYKYSGDKGNYSVIIN"
gene 42788..43603
/locus_tag="CTC_RS13905"
/old_locus_tag="CTC_p34"
/old_locus_tag="pE88_35"
/db_xref="GeneID:24255241"
CDS 42788..43603
/locus_tag="CTC_RS13905"
/old_locus_tag="CTC_p34"
/old_locus_tag="pE88_35"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="WP_011100810.1"
/db_xref="GeneID:24255241"
/translation="MKILKVDLKRAFFSKTNLITILIGLLVILLGMFMEPIRSAFNLY
YSNASDINNSQKMHLIKNSLNKATLWNFGNYYYIMLMPLLSSIPFASAYLEDKKTGFN
KFQIIRTNYKKYILSKLITTFISGFSVILIISIIYFLGINLIDSGNEFRSIFYDNTFL
GDLGRLNFNLFLVIYTIITSFMGGVYAVFGLAISTFVNSILIGIVSPFILYYFGSYLF
LIIGKVEYSPNIVNEFYRYVGISFKNIFIQLIVIFILSTICFFIKTYRSDTFE"
gene 43596..44405
/locus_tag="CTC_RS13910"
/old_locus_tag="CTC_p35"
/old_locus_tag="pE88_36"
/db_xref="GeneID:24255240"
CDS 43596..44405
/locus_tag="CTC_RS13910"
/old_locus_tag="CTC_p35"
/old_locus_tag="pE88_36"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="membrane-spanning permease"
/protein_id="WP_011100811.1"
/db_xref="GeneID:24255240"
/translation="MNNFKYSILYNFKKLNYRFILFFVLSIQVVIYFIMKEYWELNPY
INATYNNWDFYSSAYMNSDLLVSTLFFFSLYFIFNCFKDSDNERLIQIRTKSTFKWFS
FKIASIFIFNSIISVFCNLYLIIIGIYKMGYGFTWSEKSRAIYVYSDFYSPQRIVFFN
IITYSVFVTVLSCVLGILFIKIKNKKIPLIISIIYFILDKYVFRLSDKILKIIKYLSL
NSYLIFNNRQFYKYENNYMTVKLGLIVPIILLGVLLILSKILISGKSCENY"
gene 44407..45192
/locus_tag="CTC_RS13915"
/old_locus_tag="CTC_p36"
/old_locus_tag="pE88_37"
/db_xref="GeneID:24255239"
CDS 44407..45192
/locus_tag="CTC_RS13915"
/old_locus_tag="CTC_p36"
/old_locus_tag="pE88_37"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="membrane-spanning permease"
/protein_id="WP_162485003.1"
/db_xref="GeneID:24255239"
/translation="MNKKNLNYILIGMIIFLIAILNIFNAYNFLSNCSGKNISLQDII
IYIIYGFGENSKTTFIDILRFAIPYLLTIFLCGIYIENMLETGRKYIQIIRYKGYKYW
LRSNIKILFLYIIFIFIIYYFLLVIICLLFVKNTTGITDFFYKFNLYENFNISFYKIV
IYQYFINVFLTLNIILIEIFLSLLLKDTIKSYIFVNLLIFIFSTLGTYRIYNPFMISR
HKFICHIYKISPVTTIFFSFITCILLYVSIIKLIKSIIRRDEI"
gene 45189..45830
/locus_tag="CTC_RS13920"
/old_locus_tag="CTC_p37"
/old_locus_tag="pE88_38"
/db_xref="GeneID:24255238"
CDS 45189..45830
/locus_tag="CTC_RS13920"
/old_locus_tag="CTC_p37"
/old_locus_tag="pE88_38"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016291930.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_011100813.1"
/db_xref="GeneID:24255238"
/translation="MILINNVTKKFGTNIILENINLKLQEGNIYGFVGKNGSGKTILF
KMIAGFMAPTNGEIKVYNKIIGKDVDFPTSCGIIIESPGFINNLSGYKNLKLLSDINK
TISEDEIRKYMNFFGLDPYDKKKVKNYSLGMKQKLGLIQALMEDPKILILDEPMNALE
EETVIKVRELLKKIKKEKIILLSSHNKEDIDLLCDRIYHVKDRHINICNESAE"
gene complement(46073..>46402)
/locus_tag="CTC_RS13925"
/pseudo
/db_xref="GeneID:24255237"
CDS complement(46073..>46402)
/locus_tag="CTC_RS13925"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003465437.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="ATP-binding cassette domain-containing protein"
/db_xref="GeneID:24255237"
gene complement(46386..46895)
/locus_tag="CTC_RS13930"
/old_locus_tag="CTC_p38"
/old_locus_tag="pE88_39"
/db_xref="GeneID:24255236"
CDS complement(46386..46895)
/locus_tag="CTC_RS13930"
/old_locus_tag="CTC_p38"
/old_locus_tag="pE88_39"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100814.1"
/db_xref="GeneID:24255236"
/translation="MSKICRIIKNDIYSLFSINKLIFTIIIFTIISITTMQNISDIWR
NDLGIYDICFLAFLGPQTLNFKIIEVLKWIIPHIFLYYFISDFIDLELRERNIYLIYR
IKSLNTWLKSKIISLLIITFFYFFIGFIIVLALAMFKFNVKNNLSYNLLLTLNSIKLN
NFNKKYNIP"
gene complement(47307..48329)
/locus_tag="CTC_RS13935"
/db_xref="GeneID:24255235"
CDS complement(47307..48329)
/locus_tag="CTC_RS13935"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003292404.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="RNA-guided endonuclease TnpB family protein"
/protein_id="WP_052281517.1"
/db_xref="GeneID:24255235"
/translation="MKEQKLHIQDTCLEYIKTVNDTVSLMVAENKSLKLTSKDIIANL
PSAVKNQAIRDSKSVYSKYKKTKIQSFLKKPMCIWNNQNYSIGENYIAFPVMINGKSK
KIKVKAIIEQYQKDLLTNKLGTLRITKKANKLMAQISIDVVEKENVNNKAMGIDLGLK
IPAVAVTEDKKVKFFGNGRQNKYIKRKYRSLRKKLGKAKKINKIKSINDKEQRYMKDQ
DHKISRGIVNFAIQNNISVIRLEKLTNVRNTAKTSRKNEKNLHTWSFYRLAQYIEYKA
LLEGIKIEYVNPCNTSKQCPICGKLNTAKDRKYQCLCGYKAHRDLNACINIINATVVD
GNSLQA"
gene complement(48367..48801)
/gene="tnpA"
/locus_tag="CTC_RS13940"
/old_locus_tag="CTC_p40"
/db_xref="GeneID:24255234"
CDS complement(48367..48801)
/gene="tnpA"
/locus_tag="CTC_RS13940"
/old_locus_tag="CTC_p40"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010900901.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS200/IS605-like element ISClte2 family
transposase"
/protein_id="WP_035111493.1"
/db_xref="GeneID:24255234"
/translation="MTLSNIIQTWNKKYKSNNNIVYSCKYHIVWCPKYRRKVLIGNVE
TRLKELLIETCADIEVDIIKMELMPDHVHMLIEVDPQFGVHKAIKRMKGRTSKMLRQE
FPHLKTKLPTLWTNSYFVSTVGGAPLSAIKQYIENQKTSQRK"
gene complement(48826..49323)
/locus_tag="CTC_RS13945"
/old_locus_tag="CTC_p41"
/db_xref="GeneID:24255233"
CDS complement(48826..49323)
/locus_tag="CTC_RS13945"
/old_locus_tag="CTC_p41"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_129128695.1"
/db_xref="GeneID:24255233"
/translation="MFVNNIYETLSKTKMFIVLIILCFNCISRLRNLIQCSLHLDINL
SIYDLIMYIFNSFPTVLFTLNFLFLFLIPDILLEKSSYLLSIIRYKNRSQWYKNKLLS
ILFISICYVTLIIIICCIIGIGNLNFDNVWNNGSIIINDKLNNGFMNNFTRFAVKPLS
SNMGI"
gene complement(49310..50104)
/locus_tag="CTC_RS13950"
/old_locus_tag="CTC_p42"
/db_xref="GeneID:24255232"
CDS complement(49310..50104)
/locus_tag="CTC_RS13950"
/old_locus_tag="CTC_p42"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="membrane-spanning protein"
/protein_id="WP_011100818.1"
/db_xref="GeneID:24255232"
/translation="MTNLLKQDFKRAFINIYFLLAILICLLACSLGIYPYIDFFENGA
IYFFLRAHSMGSSSVLALMVPLIPAIPFAFSYVNDKESGFINYIYLRNSKKEYIISRL
ISNSLAGGLSLALPLLFVFGLLSSIFPVKYVDMGSVKGAFSSIYNTSQVNYVFLLIGL
AFIFGAVYSTLGLAITAFVENKYLAIVFPFFVYSIPGILFPILGLDCFEPSTTFIPSA
NIYTKWYMIFIQQSILFILSASLFYIKVIREGDTNAQKFFSKVVCK"
gene 50368..50796
/locus_tag="CTC_RS13955"
/old_locus_tag="CTC_p43"
/old_locus_tag="pE88_43"
/db_xref="GeneID:24255231"
CDS 50368..50796
/locus_tag="CTC_RS13955"
/old_locus_tag="CTC_p43"
/old_locus_tag="pE88_43"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100819.1"
/db_xref="GeneID:24255231"
/translation="MKKKSFLLVTILIFTFFIVFHSINKYFIIPFYLKDMGLIYTNFR
YFYYISYGVLIFTIIYFALTDFIKNKFKISKINIVIINIQVGIYLILSNIIRMKIASK
FLINRLNLNPWQYPLLIIMFLFSSLYGLVWIYISNKFMGR"
gene 50975..51895
/locus_tag="CTC_RS13960"
/old_locus_tag="CTC_p44"
/old_locus_tag="pE88_44"
/db_xref="GeneID:24255230"
CDS 50975..51895
/locus_tag="CTC_RS13960"
/old_locus_tag="CTC_p44"
/old_locus_tag="pE88_44"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015394148.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4351 domain-containing protein"
/protein_id="WP_011100820.1"
/db_xref="GeneID:24255230"
/translation="MDFNKIEDSIMKNAMDIFKQSAVDFFKLDTKIIAPANTELKTID
IKTNFTDYTFYTENDDYLHFEFQTTNKEEDINRFLFYDASLFYKYGKKVNTLVVYSSD
IKKSKTKVDAGSLKYEIKAFYMSSLNGDEEYNNLKTKIDKGEDLTKEEILSLTFIPLM
DSKEDKSTRTIKSIELAEKMEENNTKLQCITLLYAFLEKFGDAKSKKKFKEVFSMTEI
GRMIVEESIEKGRAEGIKKGIEEGIKKGRTEGKTEGKSEILIKQLIKKFKKVPEEYIQ
KIKTLSIDTIDIIALEIFDMEDIKDLEKYF"
gene 52344..53732
/locus_tag="CTC_RS13965"
/old_locus_tag="CTC_p45"
/old_locus_tag="pE88_45"
/db_xref="GeneID:24255229"
CDS 52344..53732
/locus_tag="CTC_RS13965"
/old_locus_tag="CTC_p45"
/old_locus_tag="pE88_45"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011988288.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100821.1"
/db_xref="GeneID:24255229"
/translation="MLAKQLSLYDYIDNTLKNLVTCEVEIKAEEDNIQKATFHMDTLH
KGDDGYITIAIKHNNDWSQYHYKIEELKENVGKVLSIDGVNIYLSPNSFYKPIRRIEN
VRKLNSLYIDLDYYTLDKFKDLTVDQILWNLEADYFKSKVPEANFIVITGRGLAIYWL
IEAVPYKALPLWNAVQKNFLNKLKEIGADEKSIDAARVMRLSGSVNQKNGHAVDLLFY
NDNKYNLRDIQENYLPDLTPYVKNPYHKAKGRRKKVVNLFNLYSLHYARLRDLVKLME
LREGMCRMEDGSLKATGLRELMCFLYRYWSSCYERDTENALQSTLDFNKQFREPLNIS
EVEKATNSAQKAYKAWLKDCPTGTYSRGGYNYKNKTLIKLLNITEDEMKVLETIIDNK
EVKRRTNIRTNKHHKAKRRNEKGLTKRQQEKENTIMLVKKLLKKGLGVKAIARELNIN
ISAVSRIKNNKY"
gene complement(54773..55213)
/locus_tag="CTC_RS14380"
/old_locus_tag="CTC_p46"
/db_xref="GeneID:25393101"
CDS complement(54773..55213)
/locus_tag="CTC_RS14380"
/old_locus_tag="CTC_p46"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003492452.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100822.1"
/db_xref="GeneID:25393101"
/translation="MIIIKKKIIIAIFIALIALISLFIYHGKNNEKIDIYDTVKETFL
TDKGYYNELSKYVSENVFKHTNIYTVYELNNPKYNKPFKINFNLKEKSQNKKNKLIFV
KMIYTVEINDSQNKTIGGSYDVPITFTVKNENGNWYIISKEEEA"
gene 56391..56750
/locus_tag="CTC_RS13975"
/old_locus_tag="CTC_p47"
/old_locus_tag="pE88_47"
/db_xref="GeneID:24255227"
CDS 56391..56750
/locus_tag="CTC_RS13975"
/old_locus_tag="CTC_p47"
/old_locus_tag="pE88_47"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003367730.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nucleotidyltransferase domain-containing
protein"
/protein_id="WP_011100823.1"
/db_xref="GeneID:24255227"
/translation="MKDKIKNILNVHGIDVCFLFGSYGTSRFNEDSDIDIAILGDIDF
LDTLPLLEKLEDELKREVDLIKADEVYPIIQLAIAHRCDIVFCKDNKKLQSFLLKSKK
WYEEEYRFWKKCYAAEY"
gene 56761..57186
/locus_tag="CTC_RS13980"
/old_locus_tag="CTC_p48"
/old_locus_tag="pE88_48"
/db_xref="GeneID:24255226"
CDS 56761..57186
/locus_tag="CTC_RS13980"
/old_locus_tag="CTC_p48"
/old_locus_tag="pE88_48"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035111487.1"
/db_xref="GeneID:24255226"
/translation="MVRLNNRKLKVILENTEQVINHLDFDLEQYEELDGRKKEMCART
IRNDIADIFKNLEDYLALVLKKIGVFVNDKSFKDCINLALDKQLLHDEFGKYIIDKIK
IRNFFSYRYNYPKTEELIKVYKGHEDLFKGHISFKMTLF"
gene complement(57241..57954)
/locus_tag="CTC_RS13985"
/old_locus_tag="CTC_p49"
/old_locus_tag="pE88_49"
/db_xref="GeneID:24255225"
CDS complement(57241..57954)
/locus_tag="CTC_RS13985"
/old_locus_tag="CTC_p49"
/old_locus_tag="pE88_49"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018590274.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4184 family protein"
/protein_id="WP_011100825.1"
/db_xref="GeneID:24255225"
/translation="MPFTLAHPAAVIFSKNKHFNLMGLILGSMAPDFIYFILFNPSSN
LGHTFLGFLFLNLPLCYLLNYLIIKFIRIPFILNLPFGLSRYYTYLLNYRVNIKSIKD
IIVFGYSSILGMVTHVFWDAFTHSNGFFVLNINFLKININFFNFQIPLFKIIQHGSTL
IGIILILIYLNKIKKESNKDIISSKLKYHFIAIFIQIIVIIFSYIFFNTFGIGRFVVT
FINGLFVGYLISSILFSRK"
gene complement(58025..58633)
/locus_tag="CTC_RS13990"
/old_locus_tag="CTC_p50"
/old_locus_tag="pE88_50"
/db_xref="GeneID:24255224"
CDS complement(58025..58633)
/locus_tag="CTC_RS13990"
/old_locus_tag="CTC_p50"
/old_locus_tag="pE88_50"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013720987.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tyrosine-type recombinase/integrase"
/protein_id="WP_011100826.1"
/db_xref="GeneID:24255224"
/translation="MKSVEPLRDIKTIKSMRAILKSQNTRNELLFILGINAGLRISDI
LKLKFEDVINFKNMKVLDYVIIKEKKTGKTKKFYLSSIVQKLIEKYIKEFDSISREMY
VFKSNKGENKPISRQHAWYILNTAAEMIGLVKRDDSGKIIQGEIGTHTMRKTFGYHAY
QNGTSLELLMDIFNHSCKSETLRYIGITEEEKRDVYLHSNLG"
gene 58890..59366
/locus_tag="CTC_RS13995"
/old_locus_tag="CTC_p51"
/old_locus_tag="pE88_51"
/db_xref="GeneID:24255223"
CDS 58890..59366
/locus_tag="CTC_RS13995"
/old_locus_tag="CTC_p51"
/old_locus_tag="pE88_51"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100827.1"
/db_xref="GeneID:24255223"
/translation="MTNIKQDKWSLITLTSIIIFNCFFMTILFYYNNIIIIVNRFFKK
TTEEYYFWWFNRPITNNNESALMELTYIIKIVFLLIFLLEFFYLISNNEYINLIKKKN
IIIYLAIGFGIYCVSFLFIKYKAEHYRLFMTLISTEIFSLILLKLVLKVKTEINKL"
gene complement(59451..60158)
/locus_tag="CTC_RS14000"
/old_locus_tag="CTC_p52"
/old_locus_tag="pE88_52"
/db_xref="GeneID:24255222"
CDS complement(59451..60158)
/locus_tag="CTC_RS14000"
/old_locus_tag="CTC_p52"
/old_locus_tag="pE88_52"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003374869.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/GO_function="GO:0042626 - ATPase-coupled transmembrane
transporter activity [Evidence IEA]"
/GO_function="GO:0140359 - ABC-type transporter activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_011100828.1"
/db_xref="GeneID:24255222"
/translation="MSYIQLIDIVKEYGDKQEIVHALNKININIEKGEMIAILGTSGS
GKSTLLNLIGCLDKSTSGKYIFDSKDITKCNDKDLSIIRNTKIGFIFQTFSLITEYNV
IENVELPLLYRNLLLGNTKKLDNHEIKNLALKYLKKVGMDKYINKKVTKLSGGQQQRV
AIARALVNEPDIILADEPTGSLDKKNSFNIINILKDINNTNNTTVIIVTHDEEIAKLC
KKIIRIEDGIIIESISL"
gene complement(60161..61354)
/locus_tag="CTC_RS14005"
/old_locus_tag="CTC_p53"
/old_locus_tag="pE88_53"
/db_xref="GeneID:24255221"
CDS complement(60161..61354)
/locus_tag="CTC_RS14005"
/old_locus_tag="CTC_p53"
/old_locus_tag="pE88_53"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003374834.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FtsX-like permease family protein"
/protein_id="WP_011100829.1"
/db_xref="GeneID:24255221"
/translation="MCRLEMLIKSISKQGLKFKLVFFQLVIVFISLNFAFTLINKNLE
IKNNINKLVSKDNSVMFRLSVSSQNQDPLNSINKIYEEISNNKMVDKIGSYFISKIKV
NDSEINAIFFNKGAFDLYNMNICKGSNKIFNYQKSQNEIPIFISNNLSNKLNVGNVIT
AKMLQDNQLKDFKLKVIGVLNSDTIFWNSKLGGNSSIVSLKDSIIIPFDKQYFYDEIV
DSTMKSKHTVVSTKKAHDLNEFTTYFSKINYNNTTLDYIKVNDLITQIYNINKPWIMM
TLTFSLLLSILSTIGFIGILTSYITFRKREYGIRFALGSSNKELTRLICGEIYLSLIT
TNFISILILIIINYILKMNLTPLLIIKSIIPSFIISVTMFFITFLTFKSYILKKNIVD
LIRGN"
gene complement(61356..62486)
/locus_tag="CTC_RS14010"
/old_locus_tag="CTC_p54"
/old_locus_tag="pE88_54"
/db_xref="GeneID:24255220"
CDS complement(61356..62486)
/locus_tag="CTC_RS14010"
/old_locus_tag="CTC_p54"
/old_locus_tag="pE88_54"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003374914.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="WP_011100830.1"
/db_xref="GeneID:24255220"
/translation="MFKLVLRKIRSNFTHYFLIFIGYFSALLVILFGFIFLKCSKDMT
IDYTNGKIEHQRLISVNVNDSNNMDYNNLINVLKKHSKTTSIRIDGLIEEVPINEKIF
EVPIQPVIFSETPEWIPQITNGRYLNPRESSSKAKIAVIGKGVELNKLSKNNYINLCG
EKFKIIGIAGKKSNFSNYLGSVFIPLESLPDKMKNNIKTIQIYLLKNNNSPEKEMNKI
LNDLNKLSNIKATQVEIMDNLSEFYSTLSITVFVSCLIILVSVSNISILIFYLMLKNK
KNILISIALGANRKMIWKQIFIELMLVSLCAIISALIVVHLLIPFVKDNFTHILNVEN
IQFSYFNIIATSLAPIIMSFLISIISVKKFFNLDLTMELKGE"
gene complement(62491..62748)
/locus_tag="CTC_RS15050"
/db_xref="GeneID:72390779"
CDS complement(62491..62748)
/locus_tag="CTC_RS15050"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_035125435.1"
/db_xref="GeneID:72390779"
/translation="MNNNLRLKELDILRALSFIFVVEQHSMGGHYNIKGISNLYYGIF
KFFSIETPKQKGNYKIKVAMSCKNKKKQTYFISNTVNLIVE"
gene complement(62882..63565)
/locus_tag="CTC_RS14020"
/old_locus_tag="CTC_p55"
/db_xref="GeneID:24255218"
CDS complement(62882..63565)
/locus_tag="CTC_RS14020"
/old_locus_tag="CTC_p55"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003446914.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="N-acetylmuramoyl-L-alanine amidase"
/protein_id="WP_011100831.1"
/db_xref="GeneID:24255218"
/translation="MNIINSNLKFRGLTYGNNPRKIILHHAEATSCSIEDVHTWHLHN
GWSGCGYHYFIRKNGSIYKGRPESSLGAHCINYNSVSIGICVEGNYMVEHMPLSQKSS
LIELIKYLCGKYGIKEIYGHGELNSTNCPGRNYPLAQIRGEILKDIKCPYKNYPGYLI
KVNANLKDNNVRIIQEKLMEKGYNVGSYGADGYLGGTTLNAIKSFQRDNGILVDGIVG
RDTWGRLFN"
gene 63985..65337
/locus_tag="CTC_RS14025"
/old_locus_tag="CTC_p56"
/db_xref="GeneID:24255217"
CDS 63985..65337
/locus_tag="CTC_RS14025"
/old_locus_tag="CTC_p56"
/inference="COORDINATES: protein motif:HMM:NF016289.4"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="M20/M25/M40 family metallo-hydrolase"
/protein_id="WP_011100832.1"
/db_xref="GeneID:24255217"
/translation="MKKIISLIMCLTISVVFISCSKDTTPNEDSNNKNTSIESKYKKH
IEISIDENLILENLKKLCENVRNYGSVGEKVSADYLKGKLEEYGYIVEFQEFPVYKQT
IDSTMAVKNNKDYFKLNPYNSEKKGTGKNVIGKRDNHSNEKKTIYLTAHYDTTDFTKG
VIDNGTGTAVILEVARQLRNYHSPFNIEIVFFSGEEYCRSGSRYFVSKLTEEEKKNTL
GCINVDMVGEKGAGDIVMGLVNQENNVMTVMLNEGLENKLKISRGGSSDDLSFYHGEI
PAITLLNKKPNFKIDKKEDQFPYVDLQQLKNTAYLISNFLTNFNMDTYNKIVNKDKTY
SSNKKVDKLGEVNGFKLNKISAYPIKNGYDSITEYEYINKNGKRYIFTEQIKTFINLD
DYGEFKSLDKDNNWLYSISKDSKYNTKVFYCFGIHFGEIKSDISMDEAMKILKIYSEK
"
gene complement(65527..65829)
/locus_tag="CTC_RS14030"
/old_locus_tag="CTC_p57"
/db_xref="GeneID:24255216"
CDS complement(65527..65829)
/locus_tag="CTC_RS14030"
/old_locus_tag="CTC_p57"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010297332.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100833.1"
/db_xref="GeneID:24255216"
/translation="MNNKFLDNLQRDILDKKGYYTLYAFIFILSFVITIEDIKLYLNI
FRIILSGGALFFLGLIYFKCKDLRDDKDNKVIIQNIFFFIILTFTCIYIFIKNLIL"
gene complement(66192..66410)
/locus_tag="CTC_RS14035"
/db_xref="GeneID:24255215"
CDS complement(66192..66410)
/locus_tag="CTC_RS14035"
/inference="COORDINATES: protein motif:HMM:NF022597.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2922 domain-containing protein"
/protein_id="WP_035125436.1"
/db_xref="GeneID:24255215"
/translation="MQKTLVMKFVDEKGKKVNMSLTEIKDDLESEEIEALMDVILAKK
SAFKLNNPLVSKDSAQIVERTVDEVYKA"
gene complement(66434..66655)
/locus_tag="CTC_RS14040"
/db_xref="GeneID:24255214"
CDS complement(66434..66655)
/locus_tag="CTC_RS14040"
/inference="COORDINATES: protein motif:HMM:NF019487.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF1659 domain-containing protein"
/protein_id="WP_035125437.1"
/db_xref="GeneID:24255214"
/translation="MAITKDTYSTNLVLELDLGVDENGKQKRKNKSLFKLDVLATDED
VYAIGEAASKLLEHSMISISRINKNLLLG"
gene complement(66743..66922)
/locus_tag="CTC_RS14045"
/db_xref="GeneID:24255213"
CDS complement(66743..66922)
/locus_tag="CTC_RS14045"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011986174.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YvrJ family protein"
/protein_id="WP_035111455.1"
/db_xref="GeneID:24255213"
/translation="MFDEIIMLISNVGFPVAVTTYLLVRLDQRLEELTKAFMNLTKVI
ETAIEHQKSEDYFKK"
gene 67415..68161
/locus_tag="CTC_RS14050"
/old_locus_tag="CTC_p58"
/db_xref="GeneID:24255212"
CDS 67415..68161
/locus_tag="CTC_RS14050"
/old_locus_tag="CTC_p58"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100834.1"
/db_xref="GeneID:24255212"
/translation="MKLIKKFSKVLSIFLLLLFPLQTLSTTNVHAQEKNFNIIQNGND
FIIEENGSKHIMKIKEEPGKITSYMLDENDNVEYYFINDYENKTFYSSITNKYISLND
DFYDTDETFDISNSKFMAYAKPGSKENPYRYCTPGARRTESSKLSYAEILGMVGAGAS
AATITTALMSRFILGVKATTQVVSNMKVIGAEVFAILSSVGDHTWLANHGIAMNFNYV
CSLQHYVDNAWGDNEWFYGEQVSTVSYSKY"
gene 68165..68461
/locus_tag="CTC_RS14055"
/old_locus_tag="CTC_p59"
/db_xref="GeneID:24255211"
CDS 68165..68461
/locus_tag="CTC_RS14055"
/old_locus_tag="CTC_p59"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010296827.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011100835.1"
/db_xref="GeneID:24255211"
/translation="MKNKDYSIVRLLNFILLIAFLFLFRNDKIMSNYHIRIIFNLTLI
VAGSYAVKDILLKIKGIVKNEEKFKFIKIILYTVLTLLMIYLLISTILNLIHAI"
gene complement(68640..72587)
/gene="tetX"
/locus_tag="CTC_RS14060"
/old_locus_tag="CTC_p60"
/old_locus_tag="pE88_60"
/db_xref="GeneID:24255210"
CDS complement(68640..72587)
/gene="tetX"
/locus_tag="CTC_RS14060"
/old_locus_tag="CTC_p60"
/old_locus_tag="pE88_60"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011100836.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tetanus neurotoxin TetX"
/protein_id="WP_011100836.1"
/db_xref="GeneID:24255210"
/translation="MPITINNFRYSDPVNNDTIIMMEPPYCKGLDIYYKAFKITDRIW
IVPERYEFGTKPEDFNPPSSLIEGASEYYDPNYLRTDSDKDRFLQTMVKLFNRIKNNV
AGEALLDKIINAIPYLGNSYSLLDKFDTNSNSVSFNLLEQDPSGATTKSAMLTNLIIF
GPGPVLNKNEVRGIVLRVDNKNYFPCRDGFGSIMQMAFCPEYVPTFDNVIENITSLTI
GKSKYFQDPALLLMHELIHVLHGLYGMQVSSHEIIPSKQEIYMQHTYPISAEELFTFG
GQDANLISIDIKNDLYEKTLNDYKAIANKLSQVTSCNDPNIDIDSYKQIYQQKYQFDK
DSNGQYIVNEDKFQILYNSIMYGFTEIELGKKFNIKTRLSYFSMNHDPVKIPNLLDDT
IYNDTEGFNIESKDLKSEYKGQNMRVNTNAFRNVDGSGLVSKLIGLCKKIIPPTNIRE
NLYNRTASLTDLGGELCIKIKNEDLTFIAEKNSFSEEPFQDEIVSYNTKNKPLNFNYS
LDKIIVDYNLQSKITLPNDRTTPVTKGIPYAPEYKSNAASTIEIHNIDDNTIYQYLYA
QKSPTTLQRITMTNSVDDALINSTKIYSYFPSVISKVNQGAQGILFLQWVRDIIDDFT
NESSQKTTIDKISDVSTIVPYIGPALNIVKQGYEGNFIGALETTGVVLLLEYIPEITL
PVIAALSIAESSTQKEKIIKTIDNFLEKRYEKWIEVYKLVKAKWLGTVNTQFQKRSYQ
MYRSLEYQVDAIKKIIDYEYKIYSGPDKEQIADEINNLKNKLEEKANKAMININIFMR
ESSRSFLVNQMINEAKKQLLEFDTQSKNILMQYIKANSKFIGITELKKLESKINKVFS
TPIPFSYSKNLDCWVDNEEDIDVILKKSTILNLDINNDIISDISGFNSSVITYPDAQL
VPGINGKAIHLVNNESSEVIVHKAMDIEYNDMFNNFTVSFWLRVPKVSASHLEQYGTN
EYSIISSMKKHSLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANK
WVFITITNDRLSSANLYINGVLMGSAEITGLGAIREDNNITLKLDRCNNNNQYVSIDK
FRIFCKALNPKEIEKLYTSYLSITFLRDFWGNPLRYDTEYYLIPVASSSKDVQLKNIT
DYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEIDSFVKSGDFIKLYVSYNN
NEHIVGYPKDGNAFNNLDRILRVGYNAPGIPLYKKMEAVKLRDLKTYSVQLKLYDDKN
ASLGLVGTHNGQIGNDPNRDILIASNWYFNHLKDKILGCDWYFVPTDEGWTND"
gene complement(72818..73354)
/gene="botR"
/locus_tag="CTC_RS14065"
/old_locus_tag="CTC_p61"
/old_locus_tag="pE88_61"
/db_xref="GeneID:24255209"
CDS complement(72818..73354)
/gene="botR"
/locus_tag="CTC_RS14065"
/old_locus_tag="CTC_p61"
/old_locus_tag="pE88_61"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014520037.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="botulinum neurotoxin transcription-activating
sigma factor BotR"
/protein_id="WP_011100837.1"
/db_xref="GeneID:24255209"
/translation="MENLFVKIKTLKNNNKEFEVIIIHFKNTVNILIRKYNLESHYND
ILYHLWNILKKIDLNKFNTENDLHKYISRSLKRYCLDICNKKNRDKKIIYNSEITNIK
LNLMENSCSNYLNFEFNDLISILPENQRKILYMKFFEDMKECDIAKKLHMSRQAVYKN
KVLALKKLEPIVNKLINI"
CONTIG join(AF528097.1:1..74082)
//
